ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdf08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog 389 e-108
2PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ... 383 e-106
3PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ... 355 4e-98
4PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ... 351 1e-96
5PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi... 346 3e-95
6PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)... 346 3e-95
7PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)... 338 7e-93
8PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B 327 1e-89
9PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog 289 4e-78
10PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog 280 3e-75
11PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog ... 278 1e-74
12PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog 272 5e-73
13PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4 235 6e-62
14PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro... 233 2e-61
15PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P... 233 2e-61
16PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P... 233 2e-61
17PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P... 230 2e-60
18PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T... 229 4e-60
19PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4) 229 4e-60
20PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T... 216 5e-56
21PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P... 210 2e-54
22PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso... 204 2e-52
23PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso... 202 8e-52
24PRS8_DROME (O18413) 26S protease regulatory subunit 8 201 2e-51
25PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro... 201 2e-51
26PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P... 200 2e-51
27PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S... 200 3e-51
28PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote... 197 1e-50
29PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote... 197 1e-50
30PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ... 197 2e-50
31PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ... 197 2e-50
32PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom... 197 2e-50
33PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom... 197 2e-50
34PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom... 197 2e-50
35PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote... 197 3e-50
36PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote... 197 3e-50
37PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi... 196 3e-50
38PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso... 195 7e-50
39PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso... 195 1e-49
40PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ... 195 1e-49
41PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso... 194 1e-49
42PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T... 194 2e-49
43PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ... 193 4e-49
44PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ... 193 4e-49
45PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi... 192 6e-49
46PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin... 192 6e-49
47PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo... 192 6e-49
48PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso... 191 1e-48
49PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1... 191 1e-48
50PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso... 191 1e-48
51PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot... 191 1e-48
52PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot... 191 2e-48
53PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot... 191 2e-48
54PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso... 191 2e-48
55PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b... 191 2e-48
56PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso... 190 2e-48
57PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso... 190 2e-48
58PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin... 190 2e-48
59PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ... 190 2e-48
60PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso... 189 5e-48
61PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein) 188 1e-47
62PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7 186 3e-47
63PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin... 186 4e-47
64PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso... 185 1e-46
65PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote... 184 2e-46
66PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote... 182 5e-46
67PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote... 182 5e-46
68PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote... 182 5e-46
69PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub... 182 8e-46
70PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C... 181 1e-45
71PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote... 181 1e-45
72PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4 179 4e-45
73PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A 179 7e-45
74PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso... 179 7e-45
75PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog 176 4e-44
76PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b... 176 4e-44
77PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso... 169 6e-42
78Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297 147 2e-35
79Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156 146 5e-35
80CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog 144 2e-34
81CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h... 140 3e-33
82CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val... 140 4e-33
83FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2... 136 5e-32
84AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-) 135 7e-32
85VAT_THEAC (O05209) VCP-like ATPase 135 9e-32
86CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ... 135 1e-31
87AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg... 135 1e-31
88FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2... 134 2e-31
89FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-) 134 3e-31
90SAV_SULAC (Q07590) SAV protein 133 3e-31
91FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2... 133 5e-31
92CDCH_HALSA (Q9HPF0) Protein cdcH 132 6e-31
93FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-) 132 8e-31
94AFG2_YEAST (P32794) Protein AFG2 132 1e-30
95FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2... 131 1e-30
96FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2... 131 1e-30
97FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-) 131 2e-30
98FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-) 131 2e-30
99FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-) 131 2e-30
100FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2... 131 2e-30
101FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-) 131 2e-30
102FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-) 131 2e-30
103FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2... 130 3e-30
104FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.... 130 3e-30
105FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2... 130 3e-30
106FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.... 130 4e-30
107FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2... 130 4e-30
108FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2... 130 4e-30
109CD48A_ARATH (P54609) Cell division control protein 48 homolog A ... 129 5e-30
110TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T... 129 5e-30
111FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2... 129 7e-30
112FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2... 129 7e-30
113FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.... 129 9e-30
114FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.... 129 9e-30
115FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2... 129 9e-30
116TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER... 128 1e-29
117TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER... 128 1e-29
118TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T... 128 1e-29
119TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T... 128 1e-29
120FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-) 128 1e-29
121AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-) 127 2e-29
122TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h... 127 3e-29
123FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2... 127 3e-29
124FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2... 127 3e-29
125FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2... 127 3e-29
126FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.... 126 4e-29
127RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as... 125 7e-29
128FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2... 125 9e-29
129CDC48_YEAST (P25694) Cell division control protein 48 124 3e-28
130TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h... 121 2e-27
131FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2... 121 2e-27
132CDAT_PLAF7 (P46468) Putative cell division cycle ATPase 120 3e-27
133CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48 119 5e-27
134NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl... 119 7e-27
135FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl... 118 1e-26
136FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor... 117 3e-26
137NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl... 117 3e-26
138CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ... 116 4e-26
139FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2... 116 6e-26
140FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor... 115 7e-26
141AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as... 115 7e-26
142FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl... 115 1e-25
143SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia... 114 2e-25
144PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (... 114 2e-25
145FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2... 114 3e-25
146FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2... 114 3e-25
147FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl... 113 5e-25
148RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7 112 6e-25
149FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2... 111 2e-24
150FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2... 110 2e-24
151YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo... 107 3e-23
152PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi... 107 3e-23
153PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxi... 105 8e-23
154PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxiso... 105 1e-22
155YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-) 105 1e-22
156ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2 105 1e-22
157PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxi... 104 2e-22
158TBP7_YEAST (P40340) TAT-binding homolog 7 104 2e-22
159KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3... 104 2e-22
160ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2 103 4e-22
161CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ... 103 4e-22
162ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2 103 5e-22
163TBP7_CAEEL (P54816) TAT-binding homolog 7 102 9e-22
164PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ... 101 2e-21
165PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6) 101 2e-21
166KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E... 100 2e-21
167KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3... 100 2e-21
168KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ... 100 4e-21
169PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) ... 100 6e-21
170KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E... 99 1e-20
171PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) ... 98 2e-20
172KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik... 98 2e-20
173PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6) 97 3e-20
174PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) ... 97 3e-20
175KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3... 97 4e-20
176KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik... 97 4e-20
177PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6) 97 5e-20
178KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ... 97 5e-20
179PRS2_METJA (Q58889) Putative 26S protease regulatory subunit hom... 96 6e-20
180PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6) 96 8e-20
181PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6) 96 1e-19
182YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.... 96 1e-19
183PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6) 95 1e-19
184YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.... 95 1e-19
185YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.... 95 1e-19
186PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6) 95 1e-19
187PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6) 95 2e-19
188VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein) 94 4e-19
189PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi... 94 4e-19
190NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular... 93 7e-19
191SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog 93 7e-19
192NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular... 92 1e-18
193VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein) 92 1e-18
194SEC18_YEAST (P18759) Vesicular-fusion protein SEC18 92 1e-18
195SEC18_CANAL (P34732) Vesicular-fusion protein SEC18 92 1e-18
196Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c 92 1e-18
197Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175 92 1e-18
198NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular... 92 2e-18
199NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular... 92 2e-18
200NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular... 92 2e-18
201VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ... 91 3e-18
202MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ... 90 4e-18
203VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants 90 6e-18
204Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316 89 1e-17
205TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind... 88 2e-17
206YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-) 87 5e-17
207NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleim... 84 3e-16
208SPAST_MOUSE (Q9QYY8) Spastin 84 4e-16
209VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a 84 4e-16
210VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) ... 84 4e-16
211SPAST_HUMAN (Q9UBP0) Spastin 84 4e-16
212FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.... 83 7e-16
213PRS2_METTH (O27092) Putative 26S protease regulatory subunit hom... 82 1e-15
214NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleim... 82 2e-15
215ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein... 80 6e-15
216PRS2_METTM (P42811) Putative 26S protease regulatory subunit hom... 80 6e-15
217ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein... 80 6e-15
218MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4) 77 5e-14
219ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1 76 7e-14
220ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1 76 7e-14
221ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1 76 7e-14
222YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2) 72 9e-13
223MSP1_CAEEL (P54815) Protein MSP1 homolog 72 2e-12
224SAP1_YEAST (P39955) Protein SAP1 70 6e-12
225YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46 61 2e-09
226FTSH_CHLVU (P56369) Cell division protein ftsH homolog 57 3e-08
227Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL 54 3e-07
228YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491) 49 1e-05
229YCF2_MARPO (P09975) Protein ycf2 47 3e-05
230YCF2_ADICA (Q85B60) Protein ycf2 46 7e-05
231YCF2_PINTH (P41653) Protein ycf2 46 7e-05
232BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like prot... 45 1e-04
233BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like prot... 45 2e-04
234YCF2_PINKO (Q85WV5) Protein ycf2 44 3e-04
235BCS1_YEAST (P32839) Mitochondrial chaperone BCS1 44 4e-04
236BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like prot... 44 5e-04
237YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497) 44 5e-04
238BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-... 42 0.001
239BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like prot... 42 0.002
240AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment) 40 0.004
241YCF2_PHYPA (P61243) Protein ycf2 39 0.009
242YCF2_ANTFO (Q859W7) Protein ycf2 38 0.026
243TRP13_RAT (Q5XHZ9) Thyroid receptor-interacting protein 13 (Thyr... 38 0.026
244TRP13_MOUSE (Q3UA06) Thyroid receptor-interacting protein 13 (Th... 38 0.026
245PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2 37 0.044
246PCH2_YEAST (P38126) Pachytene checkpoint protein 2 36 0.075
247YCF2_PSINU (Q8WHW9) Protein ycf2 34 0.29
248NADA_RHOBA (Q7UNR5) Quinolinate synthetase A 33 0.49
249YCF2_EPIVI (P30072) Protein ycf2 33 0.64
250HSLU_BARHE (Q6G5G0) ATP-dependent hsl protease ATP-binding subun... 32 1.1
251ATG2_ASPFU (Q4WLK5) Autophagy-related protein 2 32 1.4
252YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC ... 32 1.4
253THS_DESSY (Q53546) Thermosome subunit (Hyperthermophilic heat sh... 32 1.8
254HSLU_BRUSU (Q8FY12) ATP-dependent hsl protease ATP-binding subun... 31 2.4
255HSLU_BRUME (Q8YE30) ATP-dependent hsl protease ATP-binding subun... 31 2.4
256ZFP14_HUMAN (Q9HCL3) Zinc finger protein 14 homolog (Zfp-14) 31 2.4
257THSB_THEK8 (O24732) Thermosome subunit beta (Thermosome subunit ... 30 4.1
258HSLU_BARQU (Q6G0P9) ATP-dependent hsl protease ATP-binding subun... 30 4.1
259THSB_THEK1 (O24730) Thermosome subunit beta (Thermosome subunit ... 30 4.1
260THSB_PYRKO (Q52500) Thermosome subunit beta (Thermosome subunit ... 30 4.1
261HSLU_AQUAE (O66574) ATP-dependent hsl protease ATP-binding subun... 30 4.1
262ATP8_HUMAN (P03928) ATP synthase protein 8 (EC 3.6.3.14) (ATPase... 30 5.4
263CLPB_MYCPN (P75247) Chaperone clpB 30 5.4
264HSLU_LEPIN (Q8F3Q5) ATP-dependent hsl protease ATP-binding subun... 30 5.4
265HSLU_LEPIC (Q72RY7) ATP-dependent hsl protease ATP-binding subun... 30 5.4
266HSLU_THETN (Q8R9Y3) ATP-dependent hsl protease ATP-binding subun... 30 7.0
267HSLU_RHILO (Q98CU1) ATP-dependent hsl protease ATP-binding subun... 30 7.0
268HSLU_RHIME (Q92TA7) ATP-dependent hsl protease ATP-binding subun... 30 7.0
269CLPB_MYCGE (P47597) Chaperone clpB 30 7.0
270CFXQ_ODOSI (P49826) Protein cfxQ homolog 30 7.0
271T408_BURCE (Q51649) Putative transposase for insertion sequence ... 30 7.0
272KPC1_LYTPI (Q25378) Protein kinase C (EC 2.7.11.13) 30 7.0
273HSLU_RICTY (Q68X52) ATP-dependent hsl protease ATP-binding subun... 30 7.0
274ECTB_BACPA (Q9AP34) Diaminobutyrate--2-oxoglutarate transaminase... 29 9.2
275HSLU_RICCN (Q92II6) ATP-dependent hsl protease ATP-binding subun... 29 9.2

>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog|
          Length = 413

 Score =  389 bits (999), Expect = e-108
 Identities = 194/199 (97%), Positives = 198/199 (99%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT
Sbjct: 215 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 274

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR
Sbjct: 275 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 334

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRLVFQVCTAKMNL DEVDLEDYVSRPDKISAA+ITAICQEAGMHAVRKNRYVILPKDF
Sbjct: 335 QKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDF 394

Query: 543 EKGYRTNVKKPESDFDFYK 599
           EKGYRTNVKKP++DF+FYK
Sbjct: 395 EKGYRTNVKKPDTDFEFYK 413



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>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score =  383 bits (983), Expect = e-106
 Identities = 191/199 (95%), Positives = 197/199 (98%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT
Sbjct: 210 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 269

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR
Sbjct: 270 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 329

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRLVFQVCT+KMNLSDEVDLEDYVSRPDKISAA+I AICQEAGMHAVRKNRYVILPKDF
Sbjct: 330 QKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 389

Query: 543 EKGYRTNVKKPESDFDFYK 599
           EKGYR NVKKP++DF+FYK
Sbjct: 390 EKGYRANVKKPDTDFEFYK 408



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>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score =  355 bits (912), Expect = 4e-98
 Identities = 171/199 (85%), Positives = 190/199 (95%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+PAIIFIDE+DAIAT RFDAQT
Sbjct: 217 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQT 276

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQRIL+ELLNQMDGFDQT NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR
Sbjct: 277 GADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 336

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRL+F   TAKMNLS+EVDLE++V+RPD++S ADI AICQEAGM+AVR+NRY++LPKDF
Sbjct: 337 QKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDF 396

Query: 543 EKGYRTNVKKPESDFDFYK 599
           EKGY+ N+KK ES+++FYK
Sbjct: 397 EKGYKNNIKKDESEYEFYK 415



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>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score =  351 bits (900), Expect = 1e-96
 Identities = 171/198 (86%), Positives = 188/198 (94%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT+AAFIRVVGSEFVQKYLGEGPR+VRDVFRLA+EN+PAIIFIDE+DAIAT RFDAQT
Sbjct: 205 AHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQT 264

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQRILMELLNQMDGFD +VNVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRR
Sbjct: 265 GADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 324

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRL+FQV T+KMNLSDEVDLEDYVSRPDK+S A+I +ICQEAGMHA+RKNRYVILPKDF
Sbjct: 325 QKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDF 384

Query: 543 EKGYRTNVKKPESDFDFY 596
           EKGY+ ++KK   +F+FY
Sbjct: 385 EKGYKASIKKNTHEFNFY 402



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>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score =  346 bits (887), Expect = 3e-95
 Identities = 170/199 (85%), Positives = 185/199 (92%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQT
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRL+F   T+KMNLS+EVDLEDYV+RPDKIS ADI +ICQE+GM AVR+NRY++L KDF
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399

Query: 543 EKGYRTNVKKPESDFDFYK 599
           EK Y+T +KK E + +FYK
Sbjct: 400 EKAYKTVIKKDEQEHEFYK 418



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>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score =  346 bits (887), Expect = 3e-95
 Identities = 170/199 (85%), Positives = 185/199 (92%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQT
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRL+F   T+KMNLS+EVDLEDYV+RPDKIS ADI +ICQE+GM AVR+NRY++L KDF
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399

Query: 543 EKGYRTNVKKPESDFDFYK 599
           EK Y+T +KK E + +FYK
Sbjct: 400 EKAYKTVIKKDEQEHEFYK 418



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>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score =  338 bits (867), Expect = 7e-93
 Identities = 167/199 (83%), Positives = 181/199 (90%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQT
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRL+F   T+KMNLS+EVDLEDYV+RPDKIS ADI +ICQ  GM AVR+  Y++L KDF
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDF 399

Query: 543 EKGYRTNVKKPESDFDFYK 599
           EK Y+T +KK E + +FYK
Sbjct: 400 EKAYKTVIKKDEQEHEFYK 418



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>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score =  327 bits (839), Expect = 1e-89
 Identities = 162/199 (81%), Positives = 180/199 (90%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A +T A+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P+IIFIDE+DAIAT RFDAQT
Sbjct: 216 AANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQT 275

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQRIL+ELLNQMDGFDQ+ NVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRR
Sbjct: 276 GADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 335

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRLVF    ++MNLSD+VDLED+V+RPDKIS ADI +ICQEAGM AVR+NRYV+L KD 
Sbjct: 336 QKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDL 395

Query: 543 EKGYRTNVKKPESDFDFYK 599
           EK Y+  VKK  +DF+FYK
Sbjct: 396 EKAYKNVVKKDTNDFEFYK 414



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>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog|
          Length = 387

 Score =  289 bits (740), Expect = 4e-78
 Identities = 144/198 (72%), Positives = 166/198 (83%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+HT A FIRV GSEFVQKYLGEGPRMVRDVFRLA+E AP+I+FIDEVD+IAT RFDA T
Sbjct: 189 ANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDAST 248

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
            ADREVQR+L+ELLNQMDGFD   NVKVIMATNRADT+DPALLRPGRLDRKIEFPLPDRR
Sbjct: 249 SADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRR 308

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           QKRLVF   T+KM+L+D VD+E  V RP+KIS ADI +ICQEAGM AVR +RY++  +DF
Sbjct: 309 QKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDF 368

Query: 543 EKGYRTNVKKPESDFDFY 596
           E+ Y   V++  +   FY
Sbjct: 369 EEAYSKVVERSGTQPAFY 386



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>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog|
          Length = 389

 Score =  280 bits (715), Expect = 3e-75
 Identities = 150/201 (74%), Positives = 165/201 (82%), Gaps = 2/201 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRVVGSEFVQKYLGEGPRMVRDVFR+A+ENAPAIIFIDE+DAIAT RFDAQT
Sbjct: 189 ANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQT 248

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDR 359
           GADREVQRIL+ELL QMDGFDQ  NVKVIMATNRADTLDPALLRPGRLDRKIEFP   DR
Sbjct: 249 GADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDR 308

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           RQ+RLVFQ  TAKM LS EVDL+ ++ RPD  S A I AI Q+AG+ AVRK+R VIL  D
Sbjct: 309 RQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSD 368

Query: 540 FEKGYRTNVKKPESD-FDFYK 599
            E+ Y   VK  + + F FYK
Sbjct: 369 IEEAYARAVKPTDMEQFAFYK 389



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>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)|
           (TAT-binding homolog 2)
          Length = 428

 Score =  278 bits (710), Expect = 1e-74
 Identities = 146/202 (72%), Positives = 165/202 (81%), Gaps = 3/202 (1%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T AAFIRV GSEFV KYLGEGPRMVRDVFRLA+ENAP+IIFIDEVD+IAT RFDAQT
Sbjct: 227 ANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQT 286

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDR 359
           G+DREVQRIL+ELL QMDGFDQ+ NVKVIMATNRADTLDPALLRPGRLDRKIEFP L DR
Sbjct: 287 GSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDR 346

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           R++RL+F    +KM+L+ E DL+  + R D +S A I AI QEAG+ AVRKNRYVIL  D
Sbjct: 347 RERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSD 406

Query: 540 FEKGYRTNVKKPES--DFDFYK 599
            E+ Y T VK   +   FDFYK
Sbjct: 407 LEEAYATQVKTDNTVDKFDFYK 428



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>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog|
          Length = 423

 Score =  272 bits (696), Expect = 5e-73
 Identities = 145/203 (71%), Positives = 169/203 (83%), Gaps = 4/203 (1%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ TTA+FIRV GSEFVQKYLGEGPRMVRDVFR+A+EN+PAIIFIDE+DAIAT RFDAQT
Sbjct: 221 ANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQT 280

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDR 359
           GADREVQRIL+ELLNQMDGF+Q+ NVKVIMATNRADTLDPALLRPGRLDRKIEFP L DR
Sbjct: 281 GADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDR 340

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPK- 536
           R++RL+F    +KM+LS EVDL+  + R + +S A I AI QEAG+ AVRKNRY I+P+ 
Sbjct: 341 RERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRS 400

Query: 537 DFEKGYRTNVKK-PESD-FDFYK 599
           D E  Y   VK   E+D  +FY+
Sbjct: 401 DLEDAYAAQVKTGQEADRLEFYR 423



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>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4|
          Length = 443

 Score =  235 bits (600), Expect = 6e-62
 Identities = 108/197 (54%), Positives = 156/197 (79%), Gaps = 5/197 (2%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+R+VGSE +QKYLG+GP+MVR++FR+A+ENAP+I+FIDE+DA+ T R+D+ +
Sbjct: 243 ANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNS 302

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +RE+QR ++ELLNQ+DGFD   +VKV+MATNR ++LDPAL+RPGR+DRKIEFPLPD +
Sbjct: 303 GGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEK 362

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            KR +FQ+ T++M L  EV+LE++++  D++S ADI A+C EAG+ A+R+ R  +  +DF
Sbjct: 363 TKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDF 422

Query: 543 EKG-----YRTNVKKPE 578
           +K      YR     PE
Sbjct: 423 QKSKENVLYRKKEGAPE 439



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>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score =  233 bits (595), Expect = 2e-61
 Identities = 106/182 (58%), Positives = 150/182 (82%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DAI T R+D+ +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +RE+QR ++ELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD +
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            K+ +FQ+ T++M L+D+V L+D +   D +S ADI AIC EAG+ A+R+ R  +  +DF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

Query: 543 EK 548
           +K
Sbjct: 420 KK 421



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>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score =  233 bits (595), Expect = 2e-61
 Identities = 106/182 (58%), Positives = 150/182 (82%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DAI T R+D+ +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +RE+QR ++ELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD +
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            K+ +FQ+ T++M L+D+V L+D +   D +S ADI AIC EAG+ A+R+ R  +  +DF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

Query: 543 EK 548
           +K
Sbjct: 420 KK 421



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>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score =  233 bits (595), Expect = 2e-61
 Identities = 106/182 (58%), Positives = 150/182 (82%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DAI T R+D+ +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +RE+QR ++ELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD +
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            K+ +FQ+ T++M L+D+V L+D +   D +S ADI AIC EAG+ A+R+ R  +  +DF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

Query: 543 EK 548
           +K
Sbjct: 420 KK 421



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>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score =  230 bits (587), Expect = 2e-60
 Identities = 104/182 (57%), Positives = 149/182 (81%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+ P+I+FIDE+DAI T R+D+ +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNS 299

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +RE+QR ++ELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD +
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            K+ +FQ+ T++M L+D+V L++ +   D +S ADI AIC EAG+ A+R+ R  +  +DF
Sbjct: 360 TKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

Query: 543 EK 548
           +K
Sbjct: 420 KK 421



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>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score =  229 bits (585), Expect = 4e-60
 Identities = 106/182 (58%), Positives = 149/182 (81%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A E +P+I+FIDE+DA+ T R+DA +
Sbjct: 248 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHS 307

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +RE+QR ++ELLNQ+DGFD   +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 308 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 367

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +R +FQ+ T+KM L+D+V+LE++V   D+ S ADI AIC EAG+ A+R+ R  +   DF
Sbjct: 368 TRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 427

Query: 543 EK 548
           +K
Sbjct: 428 KK 429



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>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score =  229 bits (585), Expect = 4e-60
 Identities = 107/197 (54%), Positives = 153/197 (77%), Gaps = 5/197 (2%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DA+ T R+D+ +
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNS 298

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +RE+QR ++ELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD +
Sbjct: 299 GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 358

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            KR +F + T++M L+++V+L + +   D +S ADI AIC EAG+ A+R+ R  +  +DF
Sbjct: 359 TKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 418

Query: 543 EKG-----YRTNVKKPE 578
           +K      YR     PE
Sbjct: 419 KKSKESVLYRKKEGTPE 435



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>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score =  216 bits (549), Expect = 5e-56
 Identities = 100/182 (54%), Positives = 143/182 (78%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+R+VGSE +QKYLG+GPR+ R +F++A ENAP+I+FIDE+DAI T R+D+ +
Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNS 296

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +RE+QR ++ELLNQ+DGFD   +VKVIMATN+ +TLDPAL+RPGR+DRKI F  PD  
Sbjct: 297 GGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLS 356

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            K+ +  + T+KMNLS++V+LE  V+  D +S ADI A+C EAG+ A+R+ R  +  +DF
Sbjct: 357 TKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDF 416

Query: 543 EK 548
           ++
Sbjct: 417 KQ 418



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>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score =  210 bits (535), Expect = 2e-54
 Identities = 104/195 (53%), Positives = 147/195 (75%), Gaps = 1/195 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A F+RVVGSE +QKYLG+GPR+VR +F  A+E++P+I+FIDE+DAI T R+DAQ+
Sbjct: 246 ANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQS 305

Query: 183 GADREVQRILMELLNQMDGFDQTV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           GA+RE+QR ++ELLNQ+DGFD +  ++KVIMATNR   LDPAL+RPGR+DRKI F  PD 
Sbjct: 306 GAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDE 365

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
             KR +F + T+KMNL ++V+LE+ +   D +S A+I AI  EAG+ A+R+ R  ++  D
Sbjct: 366 ATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDD 425

Query: 540 FEKGYRTNVKKPESD 584
           F +  R  V K + +
Sbjct: 426 FRQA-REKVLKTKDE 439



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>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score =  204 bits (518), Expect = 2e-52
 Identities = 106/190 (55%), Positives = 135/190 (71%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRVVGSEFVQKY+GEG R+VR+VF+LAKE AP+IIFIDE+DAIA  R ++ T
Sbjct: 196 ANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDT 255

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR +M+LL ++DGFD   +VKVI ATNR D LDPA+LRPGR DR IE PLP   
Sbjct: 256 SGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFE 315

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++ T KM L+++VD ++     +  S ADI AIC EAGM A+R+ R  +   DF
Sbjct: 316 GRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDF 375

Query: 543 EKGYRTNVKK 572
            K     +KK
Sbjct: 376 TKAIEKVLKK 385



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>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score =  202 bits (513), Expect = 8e-52
 Identities = 102/190 (53%), Positives = 135/190 (71%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A FIRVVGSE V+K++GEG  +V+D+F+LAKE AP+IIFIDE+DAIA  R DA T
Sbjct: 225 ATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALT 284

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G DREVQR LM+LL +MDGFD   +VK+I ATNR D LDPA+LRPGR DR IE P PD +
Sbjct: 285 GGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEK 344

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ T KMNL+++V+LE+     +    A++ AIC EAGM+A+R+ R  +   DF
Sbjct: 345 GRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDF 404

Query: 543 EKGYRTNVKK 572
            K     ++K
Sbjct: 405 RKAVEKIMEK 414



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>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score =  201 bits (510), Expect = 2e-51
 Identities = 95/181 (52%), Positives = 134/181 (74%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R ++ +
Sbjct: 203 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 262

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P+  
Sbjct: 263 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEE 322

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L          S A++  +C EAGM+A+R+ R  +  +DF
Sbjct: 323 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 382

Query: 543 E 545
           E
Sbjct: 383 E 383



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>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score =  201 bits (510), Expect = 2e-51
 Identities = 95/181 (52%), Positives = 134/181 (74%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R ++ +
Sbjct: 200 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 259

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P+  
Sbjct: 260 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEE 319

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L          S A++  +C EAGM+A+R+ R  +  +DF
Sbjct: 320 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 379

Query: 543 E 545
           E
Sbjct: 380 E 380



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>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score =  200 bits (509), Expect = 2e-51
 Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 1/194 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R D+  
Sbjct: 200 AHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSG 259

Query: 183 GA-DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           G+ D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P  
Sbjct: 260 GSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSA 319

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
             +  + ++ +  MNL+  +DL+    + +  S A++  +C EAGM A+R+ R  +  +D
Sbjct: 320 EARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQED 379

Query: 540 FEKGYRTNVKKPES 581
           FE      + K +S
Sbjct: 380 FELAVAKVLNKGDS 393



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>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score =  200 bits (508), Expect = 3e-51
 Identities = 94/181 (51%), Positives = 132/181 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV G+E VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I + R +   
Sbjct: 203 AHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSG 262

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ + N+K+IMATNR D LDPALLRPGR+DRKIEFP P   
Sbjct: 263 GGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVA 322

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L     + +  S AD+  +C EAGM+A+R+ R  +  +DF
Sbjct: 323 ARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDF 382

Query: 543 E 545
           E
Sbjct: 383 E 383



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>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score =  197 bits (502), Expect = 1e-50
 Identities = 96/180 (53%), Positives = 125/180 (69%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F++A+     I+F DEVDAI  ARFD   
Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++E++NQ+DGFD   N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD  
Sbjct: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++ T  MN   ++  E         + ADI ++C EAGM+A+R  R  +  KDF
Sbjct: 343 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402



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>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score =  197 bits (502), Expect = 1e-50
 Identities = 96/180 (53%), Positives = 125/180 (69%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F++A+     I+F DEVDAI  ARFD   
Sbjct: 222 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 281

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++E++NQ+DGFD   N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD  
Sbjct: 282 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 341

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++ T  MN   ++  E         + ADI ++C EAGM+A+R  R  +  KDF
Sbjct: 342 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 401



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>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score =  197 bits (501), Expect = 2e-50
 Identities = 94/181 (51%), Positives = 132/181 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R +  +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+  
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L          S A++  +C EAGM+A+R+ R  +  +DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383

Query: 543 E 545
           E
Sbjct: 384 E 384



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>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score =  197 bits (501), Expect = 2e-50
 Identities = 94/181 (51%), Positives = 132/181 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R +  +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+  
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L          S A++  +C EAGM+A+R+ R  +  +DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383

Query: 543 E 545
           E
Sbjct: 384 E 384



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>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score =  197 bits (501), Expect = 2e-50
 Identities = 94/181 (51%), Positives = 132/181 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R +  +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+  
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L          S A++  +C EAGM+A+R+ R  +  +DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383

Query: 543 E 545
           E
Sbjct: 384 E 384



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>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score =  197 bits (501), Expect = 2e-50
 Identities = 94/181 (51%), Positives = 132/181 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R +  +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+  
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L          S A++  +C EAGM+A+R+ R  +  +DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383

Query: 543 E 545
           E
Sbjct: 384 E 384



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>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score =  197 bits (501), Expect = 2e-50
 Identities = 94/181 (51%), Positives = 132/181 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R +  +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+  
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L          S A++  +C EAGM+A+R+ R  +  +DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383

Query: 543 E 545
           E
Sbjct: 384 E 384



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>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score =  197 bits (500), Expect = 3e-50
 Identities = 96/180 (53%), Positives = 125/180 (69%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F++A+     I+F DEVDAI  ARFD   
Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++E++NQ+DGFD   N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD  
Sbjct: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++ T  MN   ++  E         + ADI ++C EAGM+A+R  R  +  KDF
Sbjct: 343 GRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402



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>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score =  197 bits (500), Expect = 3e-50
 Identities = 96/180 (53%), Positives = 125/180 (69%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F++A+     I+F DEVDAI  ARFD   
Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++E++NQ+DGFD   N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD  
Sbjct: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++ T  MN   ++  E         + ADI ++C EAGM+A+R  R  +  KDF
Sbjct: 343 GRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402



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>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein|
           homolog 10) (Fragment)
          Length = 389

 Score =  196 bits (499), Expect = 3e-50
 Identities = 97/191 (50%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R ++ +
Sbjct: 186 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGS 245

Query: 183 GA-DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           G  D EVQR ++ELLNQ+DGF+ T N+KV+M TNR D LDPALLRPGR+DRKIEFP P  
Sbjct: 246 GGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGD 305

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
             +  + ++ + KMNL+  ++L+    + +  S A++ A+C EAGM+A+R+ R  +  +D
Sbjct: 306 AGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQED 365

Query: 540 FEKGYRTNVKK 572
           FE      +KK
Sbjct: 366 FEMAVSKVMKK 376



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>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score =  195 bits (496), Expect = 7e-50
 Identities = 102/198 (51%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+H  A FIR+   E VQK++GEG R+VR++F LA+E AP+IIFIDE+DAI   R    T
Sbjct: 234 ANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDAT 293

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR L +LL +MDGFD   ++KVI ATNR D LDPALLRPGR DR I+ PLPD  
Sbjct: 294 SGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEE 353

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++ T  MNL+++VDL+      +  S ADI AIC EAGM A+R++R ++   DF
Sbjct: 354 GRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDF 413

Query: 543 EKGY-RTNVKKPESDFDF 593
            K   R   KK E   +F
Sbjct: 414 LKAVDRVMGKKEEESGEF 431



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>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score =  195 bits (495), Expect = 1e-49
 Identities = 98/180 (54%), Positives = 126/180 (70%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AH T A FI++V SEFV+KY+GEG R+VR VF LAKE +P+IIFIDE+DA+A  R  + T
Sbjct: 206 AHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSST 265

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR LM+LL ++DGF+   NV ++ ATNR D LDPALLRPGR DR IE PLP+  
Sbjct: 266 SGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNED 325

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +R + ++ T+ M L++EVD+E      D  S AD+ AIC EAGM A+R  R  +   DF
Sbjct: 326 GRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385



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>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score =  195 bits (495), Expect = 1e-49
 Identities = 93/198 (46%), Positives = 133/198 (67%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE+DAI T RFD++ 
Sbjct: 231 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 290

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     +KVI ATNRAD LDPAL+R GRLDRKIEFP P   
Sbjct: 291 SGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEE 350

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KMN++ +V+ E+     D  + A + A+C EAGM A+R++   +  +DF
Sbjct: 351 ARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 410

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      K +S  ++Y
Sbjct: 411 NEGIIQVQAKKKSSLNYY 428



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>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score =  194 bits (494), Expect = 1e-49
 Identities = 100/197 (50%), Positives = 136/197 (69%), Gaps = 1/197 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A+F+RVVGSE V+K++GEG ++VRDVF+LAKE +P IIFIDE+DA+A+ R ++ T
Sbjct: 203 AYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLT 262

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G DREVQR LM+LL +MDGFD   +VK+I ATNR D LDPA+LRPGR DR IE  +PD  
Sbjct: 263 GGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDED 322

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ T KMNL   VDL +     + +  AD+ A+C EAGM A+R+ R  I   DF
Sbjct: 323 GRLEILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDF 381

Query: 543 EKGY-RTNVKKPESDFD 590
            +   +   KK +  +D
Sbjct: 382 REAISKITGKKEKCSYD 398



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>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding|
           protein homolog)
          Length = 414

 Score =  194 bits (493), Expect = 2e-49
 Identities = 100/201 (49%), Positives = 139/201 (69%), Gaps = 2/201 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDA-Q 179
           AHHT   FIRV GSE VQKY+GEG +MVR++F +A+E+AP+IIF+DE+D+I + R +  +
Sbjct: 211 AHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGK 270

Query: 180 TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            G D EVQR ++ELLNQ+DGF+ T N+K+IMATNR D LDPALLRPGR+DRKIEFP P+ 
Sbjct: 271 GGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNE 330

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
             +  + ++ + +MNL+  ++L    S     S A+I A C EAGM A+R+ R  +  +D
Sbjct: 331 LARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQED 390

Query: 540 FEKGYRTNVKK-PESDFDFYK 599
            E      +K+  ES+  F K
Sbjct: 391 LEMAVAKVMKRGDESNMSFKK 411



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>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score =  193 bits (490), Expect = 4e-49
 Identities = 92/198 (46%), Positives = 133/198 (67%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE+DAI T RFD++ 
Sbjct: 225 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 284

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     +KVI ATNRAD LDPAL+R GRLDRKIEFP P   
Sbjct: 285 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 344

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KMN++ +V+ E+     D  + A + A+C EAGM A+R++   +  +DF
Sbjct: 345 ARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDF 404

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      K ++  ++Y
Sbjct: 405 NEGIIQVQAKKKASLNYY 422



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>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score =  193 bits (490), Expect = 4e-49
 Identities = 93/198 (46%), Positives = 132/198 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F+LAKE AP IIFIDE+DAI T RFD++ 
Sbjct: 226 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEV 285

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     +KVI ATNRAD LDPAL+R GRLDRKIEFP P   
Sbjct: 286 SGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 345

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KMN+  +V+ E+     D  + A + A+C EAGM A+R++   +  +DF
Sbjct: 346 ARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 405

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      K ++  ++Y
Sbjct: 406 NEGIIQVQAKKKASLNYY 423



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>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score =  192 bits (488), Expect = 6e-49
 Identities = 94/198 (47%), Positives = 132/198 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI T RFD++ 
Sbjct: 241 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 300

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     VKVI ATNR D LDPALLR GRLDRKIEFP+P+  
Sbjct: 301 AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 360

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KMN+S +V+ E+     D  + A   A+C EAGM A+R+    +  +D+
Sbjct: 361 ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      K +++  +Y
Sbjct: 421 MEGILEVQAKKKANLQYY 438



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>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score =  192 bits (488), Expect = 6e-49
 Identities = 94/198 (47%), Positives = 132/198 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI T RFD++ 
Sbjct: 241 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 300

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     VKVI ATNR D LDPALLR GRLDRKIEFP+P+  
Sbjct: 301 AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 360

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KMN+S +V+ E+     D  + A   A+C EAGM A+R+    +  +D+
Sbjct: 361 ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDY 420

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      K +++  +Y
Sbjct: 421 MEGILEVQAKKKANLQYY 438



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>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score =  192 bits (488), Expect = 6e-49
 Identities = 94/181 (51%), Positives = 131/181 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I + R +  +
Sbjct: 199 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGS 257

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+  
Sbjct: 258 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 317

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KMNL+  ++L          S A++  +C EAGM+A+R+ R  +  +DF
Sbjct: 318 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 377

Query: 543 E 545
           E
Sbjct: 378 E 378



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>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score =  191 bits (486), Expect = 1e-48
 Identities = 91/180 (50%), Positives = 129/180 (71%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AH T A FIRVVGSE VQKY+G+G ++VR++F +A++ AP+IIFIDE+D+IA  R +  T
Sbjct: 214 AHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETT 273

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQR LM+LL +MDGFD+  N+++I ATNR D LDPA+LRPGR DR +  P+P   
Sbjct: 274 GADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIE 333

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++   KM L+ ++D +      + +S AD+ AI  EAGM AVRK++ ++  +DF
Sbjct: 334 ARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDF 393



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>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score =  191 bits (485), Expect = 1e-48
 Identities = 96/192 (50%), Positives = 129/192 (67%), Gaps = 2/192 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F++VV S  V KY+GE  RM+R++F  A+++ P I+F+DE+DAI   RF   T ADRE+Q
Sbjct: 212 FLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQ 271

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           R LMELLNQ+DGFD    VKVIMATNR DTLDPALLRPGRLDRKIE  LP+ + +  + +
Sbjct: 272 RTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILK 331

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRT- 560
           + + K+    E+D E  V   D  SAAD+  +C EAGM A+R  R  ++ +DF K  R  
Sbjct: 332 IHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391

Query: 561 -NVKKPESDFDF 593
            + K+ E+  D+
Sbjct: 392 GDAKRLETKLDY 403



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>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score =  191 bits (485), Expect = 1e-48
 Identities = 103/182 (56%), Positives = 122/182 (67%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+H  A FIRVVGSE V+K++GEG R+V ++F LAKE AP IIFIDE+DAI   R D  T
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 252

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +REV R LM+LL +MDGFD   NVKVI ATNR D LDPALLRPGR DR IE PLPD +
Sbjct: 253 GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQ 312

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V T KMNL   VDL       +  S AD+ AI  EAGM A+R  R  +   DF
Sbjct: 313 GRLEILKVHTRKMNLKG-VDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDF 371

Query: 543 EK 548
            K
Sbjct: 372 LK 373



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>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score =  191 bits (485), Expect = 1e-48
 Identities = 95/189 (50%), Positives = 126/189 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+     +IF DE+DAI  ARFD   
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++EL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD  
Sbjct: 290 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 349

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++    M++  ++  E         + A+I ++C EAGM A+R  R V   KDF
Sbjct: 350 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 409

Query: 543 EKGYRTNVK 569
            +     +K
Sbjct: 410 LEAVNKVIK 418



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>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score =  191 bits (484), Expect = 2e-48
 Identities = 94/189 (49%), Positives = 126/189 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+     +IF DE+DAI  ARFD   
Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++EL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD  
Sbjct: 289 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 348

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++    M++  ++  E         + A+I ++C EAGM A+R  R +   KDF
Sbjct: 349 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 408

Query: 543 EKGYRTNVK 569
            +     +K
Sbjct: 409 LEAVNKVIK 417



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>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score =  191 bits (484), Expect = 2e-48
 Identities = 94/189 (49%), Positives = 126/189 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+     +IF DE+DAI  ARFD   
Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++EL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD  
Sbjct: 289 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 348

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++    M++  ++  E         + A+I ++C EAGM A+R  R +   KDF
Sbjct: 349 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 408

Query: 543 EKGYRTNVK 569
            +     +K
Sbjct: 409 LEAVNKVIK 417



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>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score =  191 bits (484), Expect = 2e-48
 Identities = 102/182 (56%), Positives = 121/182 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AH   A FIRVVGSE V+KY+GEG R+V ++F LAKE AP IIFIDE+DAI   R D  T
Sbjct: 195 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 254

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +REV R LM+LL +MDGFD   NVKVI ATNR D LDPALLRPGR DR IE PLPD  
Sbjct: 255 GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFE 314

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V T +M L   VDL       +  S AD+ AI  EAGM A+R+ R  +  +DF
Sbjct: 315 GRLEILKVHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDF 373

Query: 543 EK 548
            K
Sbjct: 374 LK 375



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>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score =  191 bits (484), Expect = 2e-48
 Identities = 93/198 (46%), Positives = 132/198 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI   RFD++ 
Sbjct: 206 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEK 265

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF  T  VKVI ATNR D LDPALLR GRLDRKIEFP+P+  
Sbjct: 266 AGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 325

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KMN+S +V+ E+     D  + A   A+C EAG+ A+R+    +  +D+
Sbjct: 326 ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDY 385

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      K +++  +Y
Sbjct: 386 MEGILEVQAKKKANLQYY 403



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>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score =  190 bits (483), Expect = 2e-48
 Identities = 102/182 (56%), Positives = 122/182 (67%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AH   A FIRVVGSE V+KY+GEG R+V ++F LAKE AP IIFIDE+DAI   R D  T
Sbjct: 195 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 254

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +REV R LM+LL +MDGFD   NVKVI ATNR D LDPALLRPGR DR IE PLPD  
Sbjct: 255 GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFE 314

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V T +M L + VDL       +  S AD+ AI  EAGM A+R+ R  +  +DF
Sbjct: 315 GRLEILKVHTRRMKLKN-VDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDF 373

Query: 543 EK 548
            K
Sbjct: 374 LK 375



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>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score =  190 bits (483), Expect = 2e-48
 Identities = 89/180 (49%), Positives = 130/180 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AH T A FIRVVGSE VQKY+G+G ++VR++F +A++ AP+IIFIDE+D+IA  R +  T
Sbjct: 214 AHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETT 273

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           GADREVQR LM+LL +MDGFD+  N+++I ATNR D LDPA+LRPGR DR +  P+P   
Sbjct: 274 GADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIE 333

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++   KM L++++D +      + +S AD+ AI  EAGM AVR+++ ++  ++F
Sbjct: 334 ARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEF 393



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>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score =  190 bits (483), Expect = 2e-48
 Identities = 94/198 (47%), Positives = 131/198 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI T RFD++ 
Sbjct: 244 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 303

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     VKVI ATNR D LDPALLR GRLDRKIEFP+P+  
Sbjct: 304 AGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 363

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KMN+S +V+ E+     D  + A   A+C EAGM A+R+    +  +D 
Sbjct: 364 ARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDH 423

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      K +++  +Y
Sbjct: 424 MEGILEVQAKKKANLQYY 441



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>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score =  190 bits (483), Expect = 2e-48
 Identities = 92/198 (46%), Positives = 132/198 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F LAKE +P IIFIDE+DAI T RFD++ 
Sbjct: 221 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEV 280

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     +KVI ATNRAD LDPAL+R GRLDRKIEFP P   
Sbjct: 281 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEE 340

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KMN++ +V+ E+     D  + A + A+C EAGM A+R++   +  +DF
Sbjct: 341 ARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 400

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      K ++  ++Y
Sbjct: 401 NEGIIQVQAKKKASLNYY 418



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>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score =  189 bits (480), Expect = 5e-48
 Identities = 102/182 (56%), Positives = 121/182 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           AH   A FIRVVGSE V+KY+GEG R+V ++F LAKE AP IIFIDE+DAI   R D  T
Sbjct: 192 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETT 251

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G +REV R LM+LL +MDGFD   NVKVI ATNR D LDPALLRPGR DR IE PLPD  
Sbjct: 252 GGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFE 311

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V T +M L   VDL       +  S AD+ AI  EAGM A+R+ R  +  +DF
Sbjct: 312 GRLEILKVHTRRMKLRG-VDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDF 370

Query: 543 EK 548
            K
Sbjct: 371 LK 372



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>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score =  188 bits (477), Expect = 1e-47
 Identities = 93/189 (49%), Positives = 125/189 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FI V+GSE VQKY+GEG RMVR++F +A+     +IF DE+DAI  ARFD   
Sbjct: 229 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++EL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD  
Sbjct: 289 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLE 348

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++    M++  ++  E         + A+I ++C EAGM A+R  R +   KDF
Sbjct: 349 GRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF 408

Query: 543 EKGYRTNVK 569
            +     +K
Sbjct: 409 LEAVNKVIK 417



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>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score =  186 bits (473), Expect = 3e-47
 Identities = 92/189 (48%), Positives = 126/189 (66%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+     +IF DE+DA+  ARFD   
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++EL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRK+EF LPD  
Sbjct: 292 GGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLA 351

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++   +M++  ++  +         + A+I ++C EAGM A+R  R V   KDF
Sbjct: 352 GRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDF 411

Query: 543 EKGYRTNVK 569
            +     VK
Sbjct: 412 LEAINKVVK 420



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>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score =  186 bits (472), Expect = 4e-47
 Identities = 92/198 (46%), Positives = 125/198 (63%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++   + VQ Y+GEG ++VRD F LAKE AP IIFIDE+DAI T RFD++ 
Sbjct: 236 AAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEK 295

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     VKV+ ATNR D LDPALLR GRLDRKIEFPLP   
Sbjct: 296 SGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSED 355

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + Q+ + KM   D+++ ++     D+ + A + A+  EAGM A+R  +  +  +DF
Sbjct: 356 SRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDF 415

Query: 543 EKGYRTNVKKPESDFDFY 596
            +G      +      FY
Sbjct: 416 VEGISEVQARKSKSVSFY 433



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>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score =  185 bits (469), Expect = 1e-46
 Identities = 95/182 (52%), Positives = 124/182 (68%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A FIRVVGSE V K++GEG R+VR++FRLA+E AP+I+FIDE+DAIA+ R D  T
Sbjct: 194 AGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGT 253

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR +++LL ++DGFD   NVKVI ATNR D +DPA+LRPGR DR IE PLP  R
Sbjct: 254 SGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLR 313

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +  + T K  ++ +VDLE      +  S AD+ A+  EAG +A+R+   VI   D 
Sbjct: 314 GRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDM 373

Query: 543 EK 548
            K
Sbjct: 374 IK 375



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>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score =  184 bits (466), Expect = 2e-46
 Identities = 86/181 (47%), Positives = 131/181 (72%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A+FI++ GSE V K++GEG ++VRD+F++A+++ PA++FIDE+DAIA+ R D++T
Sbjct: 204 ASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKT 263

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             D EVQR +M+LL++MDGFD+  ++++I ATNR D LD A+LRPGR DR IE P P+  
Sbjct: 264 SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVG 323

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++ T  MN++D VD  +  +    +S AD+ AIC EAGM A+R +R  +  +DF
Sbjct: 324 GREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDF 383

Query: 543 E 545
           +
Sbjct: 384 Q 384



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>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score =  182 bits (463), Expect = 5e-46
 Identities = 93/192 (48%), Positives = 125/192 (65%), Gaps = 2/192 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F++VV S  V KY+GE  R++R++F  A+++ P IIF+DE+DAI   RF   T ADRE+Q
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 254

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           R LMELLNQMDGFD    VK+IMATNR DTLDPALLRPGRLDRKI   LP+ + +  + +
Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR-- 557
           +    +    E+D E  V   D  + AD+  +C EAGM A+R +   ++ +DF K  R  
Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374

Query: 558 TNVKKPESDFDF 593
            + KK ES  D+
Sbjct: 375 ADSKKLESKLDY 386



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>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score =  182 bits (463), Expect = 5e-46
 Identities = 93/192 (48%), Positives = 125/192 (65%), Gaps = 2/192 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F++VV S  V KY+GE  R++R++F  A+++ P IIF+DE+DAI   RF   T ADRE+Q
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 254

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           R LMELLNQMDGFD    VK+IMATNR DTLDPALLRPGRLDRKI   LP+ + +  + +
Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR-- 557
           +    +    E+D E  V   D  + AD+  +C EAGM A+R +   ++ +DF K  R  
Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374

Query: 558 TNVKKPESDFDF 593
            + KK ES  D+
Sbjct: 375 ADSKKLESKLDY 386



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>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score =  182 bits (463), Expect = 5e-46
 Identities = 93/192 (48%), Positives = 125/192 (65%), Gaps = 2/192 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F++VV S  V KY+GE  R++R++F  A+++ P IIF+DE+DAI   RF   T ADRE+Q
Sbjct: 195 FLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 254

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           R LMELLNQMDGFD    VK+IMATNR DTLDPALLRPGRLDRKI   LP+ + +  + +
Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR-- 557
           +    +    E+D E  V   D  + AD+  +C EAGM A+R +   ++ +DF K  R  
Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374

Query: 558 TNVKKPESDFDF 593
            + KK ES  D+
Sbjct: 375 ADSKKLESKLDY 386



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>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score =  182 bits (461), Expect = 8e-46
 Identities = 100/196 (51%), Positives = 122/196 (62%), Gaps = 2/196 (1%)
 Frame = +3

Query: 18  AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197
           A FI    S  V KY+GE  R++R++F  AKE+ P IIF+DEVDAI   RF   T ADRE
Sbjct: 241 ANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADRE 300

Query: 198 VQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 377
           +QR LMELL QMDGFD     K+IMATNR DTLDPALLRPGRLDRK+E PLP+   +  +
Sbjct: 301 IQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEI 360

Query: 378 FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR 557
           F++ TAK+  + E D E  V   D  + ADI     EAG  A+R +R  I P D  K  R
Sbjct: 361 FKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVR 420

Query: 558 --TNVKKPESDFDFYK 599
               VKK E   ++ K
Sbjct: 421 KVAEVKKLEGTIEYQK 436



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>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score =  181 bits (460), Expect = 1e-45
 Identities = 90/182 (49%), Positives = 122/182 (67%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+     IIF DE+DA+  ARFD   
Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGA 323

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++EL+ Q+DGFD   N+KV+ ATNR +TLDPALLRPGR+DRK+EF LPD  
Sbjct: 324 GGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLE 383

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F++ +  M++   +  E         + A++ ++C EAGM A+R  R V   KDF
Sbjct: 384 GRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDF 443

Query: 543 EK 548
            K
Sbjct: 444 LK 445



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>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score =  181 bits (459), Expect = 1e-45
 Identities = 86/194 (44%), Positives = 133/194 (68%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A+FI++ GSE V+K++GEG R+VRD+F LA++  PAIIFIDE+DA+A  R D++T
Sbjct: 207 ANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKT 266

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             D EVQR +M+LL++MDGFD+  ++++I ATNR D LD A+LRPGR DR IE P P+  
Sbjct: 267 SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPD 326

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++   +MN++D VD  D  +   + S A + ++  EAGM A+R +R  +  +DF
Sbjct: 327 ARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDF 386

Query: 543 EKGYRTNVKKPESD 584
           +  Y   V + +++
Sbjct: 387 DDAYEKLVAEGDTE 400



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>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score =  179 bits (455), Expect = 4e-45
 Identities = 92/194 (47%), Positives = 125/194 (64%), Gaps = 2/194 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F++VV S  V KY+GE  R++R++F  AKE+ P +IF+DE+DAI   RF   T ADRE+Q
Sbjct: 194 FLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQ 253

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           R LMELLNQMDGFD     K+IMATNR DTLDPALLRPGRLDRKIE PLP+   +  + +
Sbjct: 254 RTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILK 313

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYR-- 557
           +   K++   E+D E  V   D  + AD+  +  EAG  A++++R  ++  D     R  
Sbjct: 314 IHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKV 373

Query: 558 TNVKKPESDFDFYK 599
            ++KK E   D+ K
Sbjct: 374 ADLKKLEGTIDYQK 387



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>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score =  179 bits (453), Expect = 7e-45
 Identities = 88/183 (48%), Positives = 125/183 (68%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  + A F+++   + VQ ++G+G ++VRD F LAKE +PAIIFIDE+DAI T RFD++ 
Sbjct: 240 AAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEK 299

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF     VKVI ATNR DTLDPALLR GRLDRK+EFPLP+  
Sbjct: 300 AGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEE 359

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++ + KM + D+++ E+     D+ + A + ++C EAGM A+R+    I  + F
Sbjct: 360 ARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHF 419

Query: 543 EKG 551
             G
Sbjct: 420 MDG 422



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>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score =  179 bits (453), Expect = 7e-45
 Identities = 94/191 (49%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  + A FI VV SEF QK++GEG R+VR++F +AK  AP+IIFIDE+DAI   R D  T
Sbjct: 189 ATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT 248

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +RE+QR LM+LL ++DGFD   NVK+I ATNR D LDPALLRPGR DR IE PLPD +
Sbjct: 249 SGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFK 308

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  +F +   KM + D ++LE      +  S ADI  +C EA   A+R  R  +   D 
Sbjct: 309 GRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDL 368

Query: 543 -EKGYRTNVKK 572
            E   + NVK+
Sbjct: 369 VEAINKINVKR 379



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>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score =  176 bits (447), Expect = 4e-44
 Identities = 89/189 (47%), Positives = 121/189 (64%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A FIRV+GSE VQKY+GEG RMVR++F +A+     IIF DE+DAI  ARFD   
Sbjct: 234 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGA 293

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G D EVQR ++EL+ Q+DGFD   N+KV+ ATNR +TLD AL+RPGR+DRK+EF LPD  
Sbjct: 294 GGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLE 353

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++    M +  ++  E         + A++ ++C EAGM A+R  R V   KDF
Sbjct: 354 GRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDF 413

Query: 543 EKGYRTNVK 569
               +  VK
Sbjct: 414 LDAVQKVVK 422



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>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score =  176 bits (447), Expect = 4e-44
 Identities = 88/170 (51%), Positives = 117/170 (68%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI T RFD++ 
Sbjct: 225 AAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEK 284

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             DREVQR ++ELLNQ+DGF   + VKVI ATNR D LDPALLR GRLDRKIEFP+P+  
Sbjct: 285 AGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEE 344

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
            +  + Q+ + KMN+S +V+ E+    P    A        EAGM A+R+
Sbjct: 345 ARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALRR 394



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>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score =  169 bits (428), Expect = 6e-42
 Identities = 85/172 (49%), Positives = 113/172 (65%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  + A FI+VV SEF QK++GEG R+VR+VF LA+  AP+I+FIDE+DAI   R D  T
Sbjct: 189 ATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT 248

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +RE+QR LM+LL ++DGF    NVK+I ATNR D LDPALLRPGR DR IE PLP+  
Sbjct: 249 SGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFE 308

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518
            ++ +F++   KM     +  +   S  +  S A+I  +C EAG  A+R  R
Sbjct: 309 GRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGR 360



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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score =  147 bits (371), Expect = 2e-35
 Identities = 75/170 (44%), Positives = 111/170 (65%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+   A FI + G E + KY GE  + +R++F  AKENAP+IIFIDE+D+IA  R +   
Sbjct: 237 ANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTG 296

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   R++ +LL  MDG +   +V VI ATNR D +DPAL RPGR DR+IE  +PD+ 
Sbjct: 297 EVER---RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKE 353

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
            ++ + ++ T KM L+++VDLE+     +    AD+ A+C+EA MHA+R+
Sbjct: 354 GRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRR 403



 Score =  141 bits (356), Expect = 1e-33
 Identities = 70/170 (41%), Positives = 112/170 (65%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+ + A FI V G E + K++GE  + VR++FR A++ AP +IF DE+D++A  R     
Sbjct: 510  ANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR--GGI 567

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
            G     +R++ +LL ++DG ++  +V VI ATNR D +DPALLRPGRL+R I  P PD++
Sbjct: 568  GDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKK 627

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
             +  +F++      L+D+V++E+   + +  S ADI A+C+EAGM A+R+
Sbjct: 628  ARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRE 677



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>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score =  146 bits (368), Expect = 5e-35
 Identities = 74/171 (43%), Positives = 116/171 (67%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+ + A FI V G E   K++GE  + +R++FR A+++AP IIF DE+DAIA  R    +
Sbjct: 507  ANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLS 566

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             A  +  +++ +LL ++DG ++  +V VI ATNR D +DPALLRPGRLDR I  P+PD +
Sbjct: 567  SAVTD--KVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEK 624

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  +F++ T  MNL+++V+LE+   + +  + ADI A+C+EA M AVR++
Sbjct: 625  ARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRES 675



 Score =  132 bits (331), Expect = 1e-30
 Identities = 80/201 (39%), Positives = 114/201 (56%), Gaps = 6/201 (2%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+   A F  + G E + KY+GE    +R +F  A+ENAP+IIFIDE+DAIA  R +A  
Sbjct: 234 ANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATG 293

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   R++ +LL  MDG      V VI ATNR + LDPAL RPGR DR+I   +PDR 
Sbjct: 294 EVER---RLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDRE 350

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILP--- 533
            ++ + Q+ T  M L+++VDL+           AD+ A+C+EA M A+R+    +LP   
Sbjct: 351 GRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRR----VLPSID 406

Query: 534 ---KDFEKGYRTNVKKPESDF 587
              ++  K    N+K    DF
Sbjct: 407 LEAEEIPKEVLDNLKVTMDDF 427



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>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  144 bits (363), Expect = 2e-34
 Identities = 78/196 (39%), Positives = 109/196 (55%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI V G E +  + GE    VR++F  A+++AP ++F DE+D+IAT R  +  
Sbjct: 536  ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSG 595

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             A     R+L +LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD  
Sbjct: 596  DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDED 655

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  +F+ C  K  LS ++DL          S AD+T ICQ A  +A+R+N    + KD 
Sbjct: 656  SRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIREN----IEKDI 711

Query: 543  EKGYRTNVKKPESDFD 590
            E+  R        D D
Sbjct: 712  EREKRRQENPDSMDED 727



 Score =  115 bits (289), Expect = 7e-26
 Identities = 68/175 (38%), Positives = 98/175 (56%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAP+IIFIDE+D+IA  R     
Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG     +V V+ ATNR +++DPAL R GR DR+I+  +PD  
Sbjct: 323 EVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  V  + T  M L++EVDLE           AD+ A+C EA +  +R+   V+
Sbjct: 380 GRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVL 434



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>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
            (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  140 bits (353), Expect = 3e-33
 Identities = 77/193 (39%), Positives = 112/193 (58%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI + G E +  + GE    VR++F  A+++AP ++F DE+D+IAT R ++  
Sbjct: 536  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVG 595

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             A     R+L +LL +MDG +    V +I ATNR D +DPALLRPGRLD+ I  PLPD  
Sbjct: 596  DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEE 655

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  +F+ C  K  ++ +VDL          S ADIT ICQ +  +A+R+N    + KD 
Sbjct: 656  SRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIREN----IEKDI 711

Query: 543  EKGYRTNVKKPES 581
            EK  R   + PE+
Sbjct: 712  EK-ERKRAESPEA 723



 Score =  116 bits (291), Expect = 4e-26
 Identities = 68/175 (38%), Positives = 99/175 (56%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAP+IIFIDE+D+IA  R     
Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG     +V V+ ATNR +++DPAL R GR DR+I+  +PD  
Sbjct: 323 EVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 379

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  V ++ T  M L+++VDLE           AD+ A+C EA +  +R+   VI
Sbjct: 380 GRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVI 434



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>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
            protein homolog) (VCP)
          Length = 807

 Score =  140 bits (352), Expect = 4e-33
 Identities = 78/193 (40%), Positives = 110/193 (56%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI V G E +  + GE    VR++F  A+++AP ++F DE+D+IAT R  +  
Sbjct: 536  ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVG 595

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             A     R+L +LL +MDG      V +I ATNR D +DPALLRPGRLD+ I  PLPD  
Sbjct: 596  DAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDED 655

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  +F+ C  K  ++  VDL          S ADIT ICQ A  +A+R+N    + KD 
Sbjct: 656  SRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIREN----IEKDI 711

Query: 543  EKGYRTNVKKPES 581
            E+  R + + PE+
Sbjct: 712  ER-ERKSRENPEA 723



 Score =  121 bits (303), Expect = 2e-27
 Identities = 71/175 (40%), Positives = 99/175 (56%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAP+IIFIDE+D+IA  R     
Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG     +V VI ATNR +++DPAL R GR DR+I+  +PD  
Sbjct: 323 EVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  V ++ T  M LSD+VDLE           AD+ A+C EA +  +R+   VI
Sbjct: 380 GRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434



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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score =  136 bits (342), Expect = 5e-32
 Identities = 72/182 (39%), Positives = 109/182 (59%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A   +  F R+ GS+F++ ++G G   VRD+F+ A+E AP IIFIDE+DAI  +R +A  
Sbjct: 195 AGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAIGKSRLNAIH 254

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             D E ++ L +LL +MDGFD T  + ++ ATNR D LDPALLRPGR DR++    PD +
Sbjct: 255 SND-EREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLK 313

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + ++    + L+ EVDL+         S AD+  +  EA + AVR  R  ++  D 
Sbjct: 314 GREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDL 373

Query: 543 EK 548
           ++
Sbjct: 374 DE 375



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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score =  135 bits (341), Expect = 7e-32
 Identities = 79/205 (38%), Positives = 110/205 (53%), Gaps = 13/205 (6%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A      FI V GSEF++ ++G GP  VRD+F LA++NAP I+FIDE+DA+   R     
Sbjct: 361 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 420

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G   E +  L +LL +MDGF+ T NV ++  TNR D LDPALLRPGR DR+I    PD +
Sbjct: 421 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK 480

Query: 363 QKRLVFQVCTAKMNLSDEVDLE----DYVSRPDKISAADITAICQEAGMHAVRKNRYVIL 530
            +  +F+V    + L   ++ +       S     S AD+  +C EA + A R     I 
Sbjct: 481 GRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAIN 540

Query: 531 PKDFEKGY---------RTNVKKPE 578
            K FE+           +T V +PE
Sbjct: 541 EKHFEQAIERVIGGLEKKTQVLQPE 565



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>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score =  135 bits (340), Expect = 9e-32
 Identities = 71/171 (41%), Positives = 105/171 (61%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A  + A FI + G E + K++GE  + +R++F+ AK+ APAI+F+DE+D+IA  R    T
Sbjct: 522  ATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRR--GTT 579

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
                  +RI+ +LL  +DG +    V VI ATNR D +DPALLR GR D+ I  P PD+ 
Sbjct: 580  SDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKE 639

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  + +V T  M L+ +VDL D   R +    AD+  +C+EAGM+A R+N
Sbjct: 640  ARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYREN 690



 Score =  120 bits (301), Expect = 3e-27
 Identities = 67/175 (38%), Positives = 104/175 (59%), Gaps = 5/175 (2%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ + A F+ + G E + KY G+  + +R++F  A+E AP+IIFIDE+D+IA  R + Q 
Sbjct: 245 ANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQG 304

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   R++ +LL  MDG  +  +V VI ATNR D +DPAL RPGR DR+IE  +PDR 
Sbjct: 305 EVER---RVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRN 361

Query: 363 QKRLVFQVCTAKMNLSDEVD-----LEDYVSRPDKISAADITAICQEAGMHAVRK 512
            ++ +  + T  M L    +     LE+          AD+ A+ +E+ M+A+R+
Sbjct: 362 GRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRR 416



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>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
            (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  135 bits (339), Expect = 1e-31
 Identities = 76/193 (39%), Positives = 111/193 (57%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI V G E +  + GE    VR++F  A+++AP ++F DE+D+IAT R ++  
Sbjct: 535  ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAG 594

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             A     R+L +LL +MDG +    V +I ATNR D +D ALLRPGRLD+ I  PLPD  
Sbjct: 595  DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDED 654

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  +F+ C  K  ++ +VD+          S ADIT ICQ A  +A+R+N    + KD 
Sbjct: 655  SRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIREN----IEKDI 710

Query: 543  EKGYRTNVKKPES 581
            E   R + + PE+
Sbjct: 711  ENERRRS-QNPEA 722



 Score =  116 bits (291), Expect = 4e-26
 Identities = 68/175 (38%), Positives = 99/175 (56%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAP+IIFIDE+D+IA  R     
Sbjct: 262 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNG 321

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG     +V V+ ATNR +++DPAL R GR DR+I+  +PD  
Sbjct: 322 EVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 378

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  V ++ T  M L+++VDLE           AD+ A+C EA +  +R+   VI
Sbjct: 379 GRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVI 433



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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score =  135 bits (339), Expect = 1e-31
 Identities = 79/205 (38%), Positives = 110/205 (53%), Gaps = 13/205 (6%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A      FI V GSEF++ ++G GP  VRD+F LA++NAP I+FIDE+DA+   R     
Sbjct: 362 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 421

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G   E +  L +LL +MDGF+ T NV ++  TNR D LDPALLRPGR DR+I    PD +
Sbjct: 422 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK 481

Query: 363 QKRLVFQVCTAKMNLSDEVDLE----DYVSRPDKISAADITAICQEAGMHAVRKNRYVIL 530
            +  +F+V    + L   ++ +       S     S AD+  +C EA + A R     I 
Sbjct: 482 GRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSIN 541

Query: 531 PKDFEKGY---------RTNVKKPE 578
            K FE+           +T V +PE
Sbjct: 542 QKHFEQAIERVIGGLEKKTQVLQPE 566



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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score =  134 bits (338), Expect = 2e-31
 Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 1/176 (0%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADR-EV 200
           FI V GS+FV+ ++G G   VRD+F  AK++AP IIFIDE+DA+  AR     G    E 
Sbjct: 216 FISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDER 275

Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
           ++ L +LL +MDGFD +  + VI ATNR D LDPALLRPGR DR+I  P PD R +  + 
Sbjct: 276 EQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEIL 335

Query: 381 QVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           +V      L+ +VDLE         + AD+  +  EA + A RK +  I  ++ E+
Sbjct: 336 KVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEE 391



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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score =  134 bits (336), Expect = 3e-31
 Identities = 73/174 (41%), Positives = 101/174 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  +++ AP IIFIDE+DA+   R     G   E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGFD    + +I ATNR D LDPALLRPGR DR+I   LPD R +  + Q
Sbjct: 273 QTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQ 332

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545
           V   K+ L + VD           S AD+  +  EA + A R NR V++  DFE
Sbjct: 333 VHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFE 386



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>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score =  133 bits (335), Expect = 3e-31
 Identities = 72/170 (42%), Positives = 106/170 (62%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+   A FI V G E + K+ GE  + +R++F+ A+ENAP+IIFIDE+DAIA  R D   
Sbjct: 267 ANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTG 326

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             ++   R++ +LL  MDG      V VI ATNR D +DPAL RPGR DR+IE   PD +
Sbjct: 327 EVEK---RVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTK 383

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
            ++ + QV T  M ++D+VDL+         + AD+ A+ +EA ++A+R+
Sbjct: 384 GRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRR 433



 Score =  126 bits (316), Expect = 6e-29
 Identities = 69/170 (40%), Positives = 105/170 (61%), Gaps = 1/170 (0%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR-FDAQ 179
            A  + A FI V G E + K++GE  + +R++FR A++ AP +IF DE+D+IA  R     
Sbjct: 542  ATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTD 601

Query: 180  TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            +G     +RI+ +LL +MDG      V +I ATNR D LDPALLRPGR DR I  P PD+
Sbjct: 602  SGV---TERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDK 658

Query: 360  RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509
              +  + +V T  + L+++V LED   + +  + AD+ A+ +EA ++A+R
Sbjct: 659  TARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708



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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score =  133 bits (334), Expect = 5e-31
 Identities = 68/165 (41%), Positives = 97/165 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GSEFV+ ++G G   VRD+F+ AK+NAP I+FIDE+DA+   R     G + E +
Sbjct: 234 FFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGGNDERE 293

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF+    V VI ATNRAD LD ALLRPGR DR++   +PD R +  + +
Sbjct: 294 QTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILE 353

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518
           V      +  +V LE    R    S AD+  +  EA +   R+ +
Sbjct: 354 VHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRK 398



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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score =  132 bits (333), Expect = 6e-31
 Identities = 70/170 (41%), Positives = 104/170 (61%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T+A+F  + G E + KY GE  + +R++F  AK+++P+IIFIDE+D+IA  R D   
Sbjct: 244 ANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTG 303

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   R++ +LL  MDG +    V VI ATNR D +DPAL RPGR DR+IE  +PD  
Sbjct: 304 EVER---RVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEI 360

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
            +  + ++ T  M LSD+V+L            ADI ++ +EA M A+R+
Sbjct: 361 GREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRR 410



 Score =  119 bits (299), Expect = 5e-27
 Identities = 61/169 (36%), Positives = 99/169 (58%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+ T A FI V G + + K++GE  + +R  FR A++ AP +IF DE+D++A  R   QT
Sbjct: 517  ANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGR--GQT 574

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
            G +   +R++ +LL ++DG ++   V VI ATNR D +DPAL+R GR DR ++   P   
Sbjct: 575  GGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIE 634

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509
             +  + ++ T    L+ +V L +   R D    +D+  I +EA + A+R
Sbjct: 635  GREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALR 683



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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score =  132 bits (332), Expect = 8e-31
 Identities = 73/175 (41%), Positives = 103/175 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  A+++AP IIFIDE+DA+   R     G   E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGFD    V +I ATNR D LDPALLRPGR DR++   LPD R ++ + +
Sbjct: 273 QTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILK 332

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V   K+ LS++VD           S AD+  +  EA + A R N  V+    FEK
Sbjct: 333 VHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEK 387



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>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score =  132 bits (331), Expect = 1e-30
 Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 3/181 (1%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            F+ V G E   KY+GE  R +R++FR A+  AP+IIF DE+DA++  R  + T A     
Sbjct: 578  FLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA---AN 634

Query: 204  RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
             +L  LLN++DG ++   V ++ ATNR D +D ALLRPGRLDR I    PD   +  + +
Sbjct: 635  HVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILK 694

Query: 384  VCTAKMNLSDE-VDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYV--ILPKDFEKGY 554
             CT K N  +  VDL +   R +  S A++  +CQEAG+ A+ ++  V  +  + FEK +
Sbjct: 695  KCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAF 754

Query: 555  R 557
            +
Sbjct: 755  K 755



 Score =  103 bits (257), Expect = 4e-22
 Identities = 62/175 (35%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ + A  + + G   V KYLGE    +RD+F  A++  P+IIFIDE+D+IA  R +  +
Sbjct: 300 ANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDS 359

Query: 183 GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           G   EV+ R++  LL  MDG      V VI ATNR +++DPAL RPGR D+++E  +PD 
Sbjct: 360 G---EVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDV 416

Query: 360 RQKRLV----FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
             +  +    F   ++  ++ D   ++   S+      AD+TA+C+E+ M  +++
Sbjct: 417 DARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471



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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score =  131 bits (330), Expect = 1e-30
 Identities = 71/181 (39%), Positives = 104/181 (57%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A   +  F  + GSEFV+ ++G G   VRD+F+ AK+NAP ++FIDE+DA+   R     
Sbjct: 208 AGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAGIG 267

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G + E ++ L +LL +MDGF+    V VI ATNR D LD ALLRPGR DR+I   +PD +
Sbjct: 268 GGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVK 327

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V   +  L  +V LE    R    + AD+  +  EA + AVR+    I  K+ 
Sbjct: 328 SRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEI 387

Query: 543 E 545
           +
Sbjct: 388 D 388



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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score =  131 bits (330), Expect = 1e-30
 Identities = 73/181 (40%), Positives = 103/181 (56%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A   +A F  + GSEFV+ ++G G   VRD+F+ AKE AP I+FIDE+DA+   R     
Sbjct: 225 AGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIG 284

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G + E ++ L +LL +MDGF     V V+ ATNR D LD ALLRPGR DR+I   LP+  
Sbjct: 285 GGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNIN 344

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V + K  +  +V LE    R    S AD+  +  EA +  VR+ +  I  K+ 
Sbjct: 345 GRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEI 404

Query: 543 E 545
           E
Sbjct: 405 E 405



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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  131 bits (329), Expect = 2e-30
 Identities = 70/175 (40%), Positives = 102/175 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+ AP IIFIDE+DA+   R     G   E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGF+    + VI ATNR D LDPALLRPGR DR++   LPD R +  + +
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V   ++ L+ ++D           S AD+  +  EA + A R N+ V+   +FEK
Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387



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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  131 bits (329), Expect = 2e-30
 Identities = 70/175 (40%), Positives = 102/175 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+ AP IIFIDE+DA+   R     G   E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGF+    + VI ATNR D LDPALLRPGR DR++   LPD R +  + +
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V   ++ L+ ++D           S AD+  +  EA + A R N+ V+   +FEK
Sbjct: 333 VHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387



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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  131 bits (329), Expect = 2e-30
 Identities = 70/175 (40%), Positives = 102/175 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+ AP IIFIDE+DA+   R     G   E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGF+    + VI ATNR D LDPALLRPGR DR++   LPD R +  + +
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V   ++ L+ ++D           S AD+  +  EA + A R N+ V+   +FEK
Sbjct: 333 VHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387



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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score =  131 bits (329), Expect = 2e-30
 Identities = 71/169 (42%), Positives = 98/169 (57%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+     F  V GSEFV+ ++G G   VRD+F+ A ENAP I+FIDE+DA+   R     
Sbjct: 240 ANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVG 299

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G + E ++ L +LL +MDGF +   V V+ ATNRAD LD ALLRPGR DR++   LPDR 
Sbjct: 300 GGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRL 359

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509
            +  + +V      L ++V L    +R    S AD+  +  EA + A R
Sbjct: 360 GRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATR 408



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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  131 bits (329), Expect = 2e-30
 Identities = 70/175 (40%), Positives = 102/175 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+ AP IIFIDE+DA+   R     G   E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGF+    + VI ATNR D LDPALLRPGR DR++   LPD R +  + +
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V   ++ L+ ++D           S AD+  +  EA + A R N+ V+   +FEK
Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387



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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  131 bits (329), Expect = 2e-30
 Identities = 70/175 (40%), Positives = 102/175 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+ AP IIFIDE+DA+   R     G   E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGF+    + VI ATNR D LDPALLRPGR DR++   LPD R +  + +
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V   ++ L+ ++D           S AD+  +  EA + A R N+ V+   +FEK
Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387



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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  130 bits (327), Expect = 3e-30
 Identities = 71/175 (40%), Positives = 101/175 (57%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+NAP +IFIDE+DA+   R     G   E +
Sbjct: 222 FFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDERE 281

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF     + +I ATNRAD LDPALLRPGR DR+I    PD   +  V +
Sbjct: 282 QTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLK 341

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V      L + V+L+    R    S AD+  +  EA + A R+N+  I  +D ++
Sbjct: 342 VHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDE 396



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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score =  130 bits (327), Expect = 3e-30
 Identities = 69/175 (39%), Positives = 101/175 (57%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+NAP +IFIDE+DA+   R     G   E +
Sbjct: 212 FFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDERE 271

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGF     V VI ATNR D LDPAL RPGR DR++   LPD + +  + +
Sbjct: 272 QTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILK 331

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V   K++++ +VD           S AD+  +  EA + A R N+  +   +FEK
Sbjct: 332 VHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEK 386



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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score =  130 bits (327), Expect = 3e-30
 Identities = 73/177 (41%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+ AP+IIFIDE+DA+   R     G + E +
Sbjct: 254 FYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDERE 313

Query: 204 RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
           + L +LL +MDGF    N V VI ATNR+D LDPALLRPGR DRK+    PD + +  V 
Sbjct: 314 QTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVL 373

Query: 381 QVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKG 551
           +V      L+ +VDL +  ++      AD+  +  EA + A R+N+  I   D ++G
Sbjct: 374 KVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEG 430



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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  130 bits (326), Expect = 4e-30
 Identities = 66/164 (40%), Positives = 96/164 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GSEFV+ ++G G   VRD+F  AK NAP I+FIDE+DA+   R     G + E +
Sbjct: 222 FFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDERE 281

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF+    + ++ ATNR D LD AL+RPGR DR++    PD   +R +  
Sbjct: 282 QTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILN 341

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
           V      LS +VDL+    R    + AD++ +  EA + A R+N
Sbjct: 342 VHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRN 385



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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score =  130 bits (326), Expect = 4e-30
 Identities = 70/162 (43%), Positives = 97/162 (59%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+NAP IIFIDE+DA+   R     G   E +
Sbjct: 227 FFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDERE 286

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF     + +I ATNRAD LDPALLRPGR DR+I+   PD   +  V +
Sbjct: 287 QTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLK 346

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509
           V      L+D+V+L+   +R    S AD+  +  EA + A R
Sbjct: 347 VHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAAR 388



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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score =  130 bits (326), Expect = 4e-30
 Identities = 69/168 (41%), Positives = 99/168 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+N+P IIF+DE+DA+   R     G   E +
Sbjct: 224 FFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHDERE 283

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF     V +I ATNR D LDPALLRPGR DR+I    PD   +R V +
Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
           V +    ++D+ DL+    R   ++ AD+  +  EA +   R+N  VI
Sbjct: 344 VHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVI 391



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>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  129 bits (325), Expect = 5e-30
 Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 1/194 (0%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI V G E +  + GE    VR++F  A+++AP ++F DE+D+IAT R     
Sbjct: 535  ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSG 594

Query: 183  G-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            G       R+L +LL +MDG +    V +I ATNR D +D ALLRPGRLD+ I  PLPD 
Sbjct: 595  GDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDE 654

Query: 360  RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
              +  +F+    K  ++ +VD+          S ADIT ICQ A  +A+R+N    + KD
Sbjct: 655  DSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIREN----IEKD 710

Query: 540  FEKGYRTNVKKPES 581
             EK  R + + PE+
Sbjct: 711  IEKEKRRS-ENPEA 723



 Score =  116 bits (291), Expect = 4e-26
 Identities = 68/175 (38%), Positives = 99/175 (56%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAP+IIFIDE+D+IA  R     
Sbjct: 262 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNG 321

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG     +V V+ ATNR +++DPAL R GR DR+I+  +PD  
Sbjct: 322 EVER---RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 378

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  V ++ T  M L+++VDLE           AD+ A+C EA +  +R+   VI
Sbjct: 379 GRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVI 433



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>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  129 bits (325), Expect = 5e-30
 Identities = 73/175 (41%), Positives = 102/175 (58%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAPAIIFIDE+DAIA  R     
Sbjct: 259 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 318

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG  Q  +V V+ ATNR +++DPAL R GR DR+++  +PD  
Sbjct: 319 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  + Q+ T  M LSD+VDLE   +       AD+ A+C EA + A+RK   +I
Sbjct: 376 GRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430



 Score =  121 bits (304), Expect = 1e-27
 Identities = 63/171 (36%), Positives = 98/171 (57%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI + G E +  + GE    VR++F  A++ AP ++F DE+D+IA AR     
Sbjct: 532  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 591

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
                   R++ ++L +MDG     NV +I ATNR D +DPA+LRPGRLD+ I  PLPD +
Sbjct: 592  DGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 651

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  + +    K  ++ +VD++      +  S AD+T ICQ A   A+R++
Sbjct: 652  SRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRES 702



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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  129 bits (324), Expect = 7e-30
 Identities = 69/175 (39%), Positives = 104/175 (59%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VR +F  AK+ APAIIFIDE+DA+   R     G + E +
Sbjct: 248 FFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDERE 307

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF+    + VI ATNR+D LDPALLRPGR DRK+    PD + +  + +
Sbjct: 308 QTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILK 367

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V      L+++VDL+    +      AD+  +  EA + A R+N+ +I   D ++
Sbjct: 368 VHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDE 422



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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  129 bits (324), Expect = 7e-30
 Identities = 69/175 (39%), Positives = 104/175 (59%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VR +F  AK+ APAIIFIDE+DA+   R     G + E +
Sbjct: 248 FFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDERE 307

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF+    + VI ATNR+D LDPALLRPGR DRK+    PD + +  + +
Sbjct: 308 QTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILK 367

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V      L+++VDL+    +      AD+  +  EA + A R+N+ +I   D ++
Sbjct: 368 VHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDE 422



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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score =  129 bits (323), Expect = 9e-30
 Identities = 66/168 (39%), Positives = 96/168 (57%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GSEFV+ ++G G   VRD+F+ AKENAP ++FIDE+DA+   R     G + E +
Sbjct: 272 FFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDERE 331

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF+    + VI ATNR D LD ALLRPGR DR++    PD + + L+  
Sbjct: 332 QTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILA 391

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
           +      L +EV L     R    + AD+  +  EA +   R+ +  I
Sbjct: 392 IHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAI 439



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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score =  129 bits (323), Expect = 9e-30
 Identities = 65/168 (38%), Positives = 97/168 (57%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GSEFV+ ++G G   VRD+F+ AKENAP +IFIDE+DA+   R     G + E +
Sbjct: 233 FFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDERE 292

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF+    + +I ATNR D LD AL+RPGR DR++    PD   ++ + +
Sbjct: 293 QTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILE 352

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
           V      L+ EV ++    R    S AD+  +  EA +   R+ +  I
Sbjct: 353 VHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAI 400



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>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score =  129 bits (323), Expect = 9e-30
 Identities = 71/175 (40%), Positives = 99/175 (56%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F +  GS F    +G G + VRD+F  AK+ AP IIFIDE+D++ + R   +  +   V+
Sbjct: 289 FFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVE 348

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF     V V+ ATNR D LD ALLRPGR DR I+  LPD +++  + Q
Sbjct: 349 QTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQ 408

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V     NLS ++ L D   R    S A +  +  EA + AVR NR  I   D ++
Sbjct: 409 VHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDE 463



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>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  128 bits (322), Expect = 1e-29
 Identities = 72/175 (41%), Positives = 102/175 (58%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAPAIIFIDE+DAIA  R     
Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 317

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG  Q  +V V+ ATNR +++DPAL R GR DR+++  +PD  
Sbjct: 318 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  + Q+ T  M L+D+VDLE   +       AD+ A+C EA + A+RK   +I
Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 429



 Score =  125 bits (313), Expect = 1e-28
 Identities = 68/194 (35%), Positives = 107/194 (55%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI + G E +  + GE    VR++F  A++ AP ++F DE+D+IA AR     
Sbjct: 531  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 590

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
                   R++ ++L +MDG     NV +I ATNR D +DPA+LRPGRLD+ I  PLPD +
Sbjct: 591  DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 650

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  + +    K  ++ +VDLE      +  S AD+T ICQ A   A+R++    + ++ 
Sbjct: 651  SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 710

Query: 543  EKGYRTNVKKPESD 584
            E+    +  + E D
Sbjct: 711  ERQTNPSAMEVEED 724



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>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  128 bits (322), Expect = 1e-29
 Identities = 72/175 (41%), Positives = 102/175 (58%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAPAIIFIDE+DAIA  R     
Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 317

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG  Q  +V V+ ATNR +++DPAL R GR DR+++  +PD  
Sbjct: 318 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  + Q+ T  M L+D+VDLE   +       AD+ A+C EA + A+RK   +I
Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 429



 Score =  125 bits (313), Expect = 1e-28
 Identities = 68/194 (35%), Positives = 107/194 (55%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI + G E +  + GE    VR++F  A++ AP ++F DE+D+IA AR     
Sbjct: 531  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 590

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
                   R++ ++L +MDG     NV +I ATNR D +DPA+LRPGRLD+ I  PLPD +
Sbjct: 591  DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 650

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  + +    K  ++ +VDLE      +  S AD+T ICQ A   A+R++    + ++ 
Sbjct: 651  SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 710

Query: 543  EKGYRTNVKKPESD 584
            E+    +  + E D
Sbjct: 711  ERQTNPSAMEVEED 724



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>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  128 bits (322), Expect = 1e-29
 Identities = 72/175 (41%), Positives = 102/175 (58%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAPAIIFIDE+DAIA  R     
Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 317

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG  Q  +V V+ ATNR +++DPAL R GR DR+++  +PD  
Sbjct: 318 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  + Q+ T  M L+D+VDLE   +       AD+ A+C EA + A+RK   +I
Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 429



 Score =  125 bits (313), Expect = 1e-28
 Identities = 68/194 (35%), Positives = 107/194 (55%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI + G E +  + GE    VR++F  A++ AP ++F DE+D+IA AR     
Sbjct: 531  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 590

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
                   R++ ++L +MDG     NV +I ATNR D +DPA+LRPGRLD+ I  PLPD +
Sbjct: 591  DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 650

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  + +    K  ++ +VDLE      +  S AD+T ICQ A   A+R++    + ++ 
Sbjct: 651  SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 710

Query: 543  EKGYRTNVKKPESD 584
            E+    +  + E D
Sbjct: 711  ERQTNPSAMEVEED 724



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>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  128 bits (322), Expect = 1e-29
 Identities = 72/175 (41%), Positives = 102/175 (58%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAPAIIFIDE+DAIA  R     
Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 317

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG  Q  +V V+ ATNR +++DPAL R GR DR+++  +PD  
Sbjct: 318 EVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  + Q+ T  M L+D+VDLE   +       AD+ A+C EA + A+RK   +I
Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 429



 Score =  125 bits (313), Expect = 1e-28
 Identities = 68/194 (35%), Positives = 107/194 (55%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI + G E +  + GE    VR++F  A++ AP ++F DE+D+IA AR     
Sbjct: 531  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIG 590

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
                   R++ ++L +MDG     NV +I ATNR D +DPA+LRPGRLD+ I  PLPD +
Sbjct: 591  DGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 650

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  + +    K  ++ +VDLE      +  S AD+T ICQ A   A+R++    + ++ 
Sbjct: 651  SRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER 710

Query: 543  EKGYRTNVKKPESD 584
            E+    +  + E D
Sbjct: 711  ERQTNPSAMEVEED 724



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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score =  128 bits (322), Expect = 1e-29
 Identities = 69/175 (39%), Positives = 103/175 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  ++++AP IIFIDE+DA+   R     G   E +
Sbjct: 213 FFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDERE 272

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L ++L +MDGFD    + +I ATNR D LDPALLRPGR DR++   LPD R +  + +
Sbjct: 273 QTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILK 332

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V   K+ LS +VD           S AD+  +  EA + A R ++ V+   +FE+
Sbjct: 333 VHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFER 387



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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score =  127 bits (320), Expect = 2e-29
 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A      FI V GSEF++ ++G GP  VRD+F +A+++AP I+FIDE+DAI   R     
Sbjct: 228 AGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHL 287

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G   E +  L ++L +MDGF+ + NV V+  TNR D LDPAL RPGR DR+I    PD +
Sbjct: 288 GGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIK 347

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSR-----PDKISAADITAICQEAGMHAVRKNRYVI 527
            +  +F+V    + L   +  +D +SR         + ADI+ +C EA + A R     +
Sbjct: 348 GRSSIFKVHLRPLKLDGSLS-KDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSV 406

Query: 528 LPKDFEK 548
             + FE+
Sbjct: 407 QERHFEQ 413



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>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
            (p97/CDC48 homolog 2)
          Length = 810

 Score =  127 bits (318), Expect = 3e-29
 Identities = 69/171 (40%), Positives = 98/171 (57%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI + G E +  + GE    VRDVF  A+  AP ++F DE+D+IA AR  +  
Sbjct: 537  ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVG 596

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             A     R++ ++L +MDG +   NV +I ATNR D +DPA+LRPGRLD+ I  PLPD  
Sbjct: 597  DAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEA 656

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  +F+    K  LS ++DL          S AD+T ICQ A   A+R++
Sbjct: 657  SRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707



 Score =  113 bits (282), Expect = 5e-25
 Identities = 64/175 (36%), Positives = 98/175 (56%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F   ++N+PAI+FIDE+DAIA  R  A  
Sbjct: 264 ANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHG 323

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             ++   RI+ +LL  MDG     +V VI ATNR +++D AL R GR DR+I+  +PD  
Sbjct: 324 EVEK---RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 380

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  + ++ T  M L ++VDLE   +       AD+ ++C EA +  +R+   +I
Sbjct: 381 GRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELI 435



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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  127 bits (318), Expect = 3e-29
 Identities = 68/168 (40%), Positives = 98/168 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+N+P IIF+DE+DA+   R     G   E +
Sbjct: 224 FFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDERE 283

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF     V +I ATNR D LDPALLRPGR DR+I    PD   +R V +
Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
           V +    ++ + DL+    R   ++ AD+  +  EA +   R+N  VI
Sbjct: 344 VHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVI 391



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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  127 bits (318), Expect = 3e-29
 Identities = 68/168 (40%), Positives = 98/168 (58%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GS+FV+ ++G G   VRD+F  AK+N+P IIF+DE+DA+   R     G   E +
Sbjct: 224 FFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDERE 283

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF     V +I ATNR D LDPALLRPGR DR+I    PD   +R V +
Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
           V +    ++ + DL+    R   ++ AD+  +  EA +   R+N  VI
Sbjct: 344 VHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVI 391



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>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score =  127 bits (318), Expect = 3e-29
 Identities = 70/175 (40%), Positives = 99/175 (56%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F +  GS F    +G G + VRD+F  AK+ AP IIFIDE+D++ + R   +  +   V+
Sbjct: 292 FFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVE 351

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF     V V+ ATNR D LD ALLRPGR DR I+  LPD +++  + +
Sbjct: 352 QTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILK 411

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
           V     NLS ++ L D   R    S A +  +  EA + AVR NR  I   D ++
Sbjct: 412 VHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDE 466



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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score =  126 bits (317), Expect = 4e-29
 Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 2/177 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFD-AQTGADREV 200
           F  + GSEFV+ ++G G   VRD+F  AK+ AP I+FIDE+DAI  +R   A  G + E 
Sbjct: 235 FFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAFMGGNDER 294

Query: 201 QRILMELLNQMDGFDQT-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 377
           ++ L +LL +MDGF      V V+ ATNR +TLDPALLRPGR DR++    PD   +  +
Sbjct: 295 EQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKI 354

Query: 378 FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
            ++   K+ L  EV+L++  +R    + AD+  +  EA + A R  +  +   DF +
Sbjct: 355 LEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFRE 411



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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score =  125 bits (315), Expect = 7e-29
 Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 3/178 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQ-TGADREV 200
           F  V GSEFV+ ++G G   VRD+F+ A+ENAP+I+FIDE+DAI  AR     +GA+ E 
Sbjct: 409 FYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDER 468

Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
           +  L ++L +MDGF    +V V+  TNR D LD ALLRPGR DR I    P+   ++ +F
Sbjct: 469 ENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIF 528

Query: 381 QVCTAKMNLSDEV-DLEDYVSR-PDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
            V    + L+ E+ DL++ ++      S ADI  +C EA + A R +   +    FE+
Sbjct: 529 AVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQ 586



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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score =  125 bits (314), Expect = 9e-29
 Identities = 64/165 (38%), Positives = 94/165 (56%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GSEFV+ ++G G   VRD+F+ AKEN+P I+FIDE+DA+   R     G + E +
Sbjct: 234 FFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIGGGNDERE 293

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + L +LL +MDGF+    + +I ATNR D LD ALLRPGR DR++   +PD + +  +  
Sbjct: 294 QTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILN 353

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518
           V      L   + LE    R    S AD+  +  EA +   R+ +
Sbjct: 354 VHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRK 398



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>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score =  124 bits (310), Expect = 3e-28
 Identities = 70/175 (40%), Positives = 100/175 (57%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++NAPAIIFIDE+D+IA  R     
Sbjct: 269 ANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNG 328

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   R++ +LL  MDG     NV VI ATNR +++DPAL R GR DR+++  +PD  
Sbjct: 329 EVER---RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDAT 385

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  V ++ T  M L+D+VDLE   +       ADI ++C EA M  +R+   +I
Sbjct: 386 GRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLI 440



 Score =  115 bits (289), Expect = 7e-26
 Identities = 64/169 (37%), Positives = 92/169 (54%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A   +A FI V G E +  + GE    +RD+F  A+  AP ++F+DE+D+IA AR  +  
Sbjct: 542  ATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLG 601

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             A     R++ +LL +MDG +   NV VI ATNR D +DPA+LRPGRLD+ I  PLPD  
Sbjct: 602  DAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDEN 661

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509
             +  +      K  L   ++L          S AD+  I Q A  +A++
Sbjct: 662  ARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIK 710



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>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
            (p97/CDC48 homolog 1)
          Length = 809

 Score =  121 bits (303), Expect = 2e-27
 Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI + G E +  + GE    VRDVF  A+  AP ++F DE+D+IA AR     
Sbjct: 538  ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAG 597

Query: 183  G-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            G       R++ ++L +MDG +   NV +I ATNR D +DPA+LRPGRLD+ I  PLPD 
Sbjct: 598  GDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDE 657

Query: 360  RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
              +  + +    K  LS ++DL          S AD+T ICQ A   A+R++
Sbjct: 658  ASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709



 Score =  112 bits (280), Expect = 8e-25
 Identities = 64/175 (36%), Positives = 97/175 (55%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T + F  + G E + K  GE    +R  F   ++N PAI+FIDE+DAIA  R     
Sbjct: 265 ANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNG 324

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   RI+ +LL  MDG     N+ VI ATNR +++D AL R GR DR+I+  +PD  
Sbjct: 325 EVER---RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 381

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  + ++ T  M L+D+VDLE   +       AD+ ++C EA +  +R+   +I
Sbjct: 382 GRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELI 436



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>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score =  121 bits (303), Expect = 2e-27
 Identities = 64/182 (35%), Positives = 104/182 (57%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A      F  +  S FV+ Y+G G + VR++F+ A++ APAIIFIDE+DA+  +R     
Sbjct: 266 AGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIG 325

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G + E ++ L ++L +MDG ++   + ++ ATNR D LDPALLRPGR DR I   LPD +
Sbjct: 326 GGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIK 385

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
           ++  + ++ +    LS E+  +    R    S A +  +  EA + +VR+   VI+    
Sbjct: 386 EREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQI 445

Query: 543 EK 548
           ++
Sbjct: 446 DE 447



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>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score =  120 bits (301), Expect = 3e-27
 Identities = 64/175 (36%), Positives = 102/175 (58%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A FI V G E +  + GE    VRD+F  A+  +P IIF DE+D++A  R ++ T
Sbjct: 989  ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNT 1047

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
              D    R++ ++L ++DG ++   + +I ATNR D LD AL RPGRLD+ I   LPD +
Sbjct: 1048 NNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
             +  +F+       L+++VD+ D   R +  S ADIT +CQ A   A+++  +++
Sbjct: 1107 SRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLL 1161



 Score =  114 bits (284), Expect = 3e-25
 Identities = 60/171 (35%), Positives = 97/171 (56%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+ + A    + G E + K++GE  + +R +F+ A E  P IIFIDE+D+IA  R  +  
Sbjct: 582  ANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNN 641

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
              ++   R++ +LL  MDG  +  NV V+ ATNR +++DPAL R GR DR+IE P+PD +
Sbjct: 642  ELEK---RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQ 698

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  +    T KM L  +V+L            AD+  +C EA +  ++++
Sbjct: 699  GRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEH 749



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>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score =  119 bits (299), Expect = 5e-27
 Identities = 65/175 (37%), Positives = 100/175 (57%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+ T A F  + G E + K  GE    +R  F  A++N+PAIIFIDE+D+IA  R     
Sbjct: 279 ANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 338

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
             +R   R++ +LL  MDG     NV V+ ATNR +++DPAL R GR DR+++  +PD  
Sbjct: 339 EVER---RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPT 395

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
            +  + ++ T  M L+D+VDLE   +       +D+ ++C EA M  +R+   +I
Sbjct: 396 GRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMI 450



 Score =  117 bits (294), Expect = 2e-26
 Identities = 68/183 (37%), Positives = 101/183 (55%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+  +A FI V G E +  + GE    VRD+F  A+  AP ++F+DE+D+IA AR  A  
Sbjct: 552  ANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKAR-GASA 610

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
            G      R++ +LL +MDG +   NV VI ATNR D +DPAL+RPGRLD+ I  PLPD  
Sbjct: 611  GDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEE 670

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
             +  + Q       ++++VDL          S AD+  + Q A   A++ +    + ++ 
Sbjct: 671  ARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKREN 730

Query: 543  EKG 551
            E G
Sbjct: 731  ETG 733



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>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
            protein) (NVLp)
          Length = 855

 Score =  119 bits (298), Expect = 7e-27
 Identities = 69/175 (39%), Positives = 104/175 (59%), Gaps = 5/175 (2%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+ +   FI V G E +  Y+GE  R VR VF+ AK +AP +IF DEVDA+   R D +T
Sbjct: 635  ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 694

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
            GA     R++ +LL +MDG +    V ++ ATNR D +DPA+LRPGRLD+ +   LP   
Sbjct: 695  GAS---VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 751

Query: 363  QKRLVFQVCT---AKMNLSDEVDLEDYVS--RPDKISAADITAICQEAGMHAVRK 512
             +  + +  T    K  L ++V+LE   +  R +  + AD+TA+ +EA + A+R+
Sbjct: 752  DRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQ 806



 Score =  102 bits (253), Expect = 1e-21
 Identities = 63/184 (34%), Positives = 94/184 (51%)
 Frame = +3

Query: 27  IRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQR 206
           ++V   E V    GE  + +R++F  A  NAP I+FIDE+DAI   R  A    +R +  
Sbjct: 326 LKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVA 385

Query: 207 ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 386
            L+  ++ ++    T  V VI ATNR D+LDPAL R GR DR++   +PD   +  + Q 
Sbjct: 386 QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQT 445

Query: 387 CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 566
              K+ L +  +             AD+ A+C+EA M AV  NR ++  +  +K      
Sbjct: 446 LCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAV--NRVLMKQQAQQK------ 497

Query: 567 KKPE 578
           KKPE
Sbjct: 498 KKPE 501



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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  118 bits (296), Expect = 1e-26
 Identities = 67/185 (36%), Positives = 95/185 (51%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F     SEFV+ ++G G   VRD+F  AK  AP I+FIDE+DA+   R     G + E +
Sbjct: 314 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDERE 373

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL +MDGF     V V+ ATNR D LD ALLRPGR DR++    PD   +  + Q
Sbjct: 374 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQ 433

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563
           V +    L+ +VD E    R    + AD+  +  EA + A R+    I   +        
Sbjct: 434 VHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERI 493

Query: 564 VKKPE 578
           +  PE
Sbjct: 494 IAGPE 498



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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  117 bits (293), Expect = 3e-26
 Identities = 66/185 (35%), Positives = 94/185 (50%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F     SEFV+ ++G G   VRD+F  AK  AP I+FIDE+DA+   R     G + E +
Sbjct: 323 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDERE 382

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL +MDGF     V V+ ATNR D LD ALLRPGR DR++    PD   +  + Q
Sbjct: 383 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 442

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563
           V +    L  +VD +    R    + AD+  +  EA + A R+    I   +        
Sbjct: 443 VHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERI 502

Query: 564 VKKPE 578
           +  PE
Sbjct: 503 IAGPE 507



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>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
            protein) (NVLp)
          Length = 856

 Score =  117 bits (292), Expect = 3e-26
 Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+ +   FI V G E +  Y+GE  R VR VF+ AK +AP +IF DEVDA+   R D +T
Sbjct: 636  ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 695

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
            GA     R++ +LL +MDG +    V ++ ATNR D +DPA+LRPGRLD+ +   LP   
Sbjct: 696  GAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 752

Query: 363  QKRLVFQVCT---AKMNLSDEVDLEDYVS--RPDKISAADITAICQEAGMHAVRK 512
             +  + +  T    K  L  +V+LE      R D  + AD++A+ +EA + A+R+
Sbjct: 753  DRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 807



 Score =  104 bits (259), Expect = 2e-22
 Identities = 59/162 (36%), Positives = 83/162 (51%)
 Frame = +3

Query: 27  IRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQR 206
           ++V   E V    GE  + +R++F  A  NAP IIFIDE+DAI   R  A    +R +  
Sbjct: 327 LKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVA 386

Query: 207 ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 386
            L+  ++ ++    T  V VI ATNR D+LDPAL R GR DR+I   +PD   +  + Q 
Sbjct: 387 QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQT 446

Query: 387 CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
              K+ L    D             AD+ A+C+EA M AV +
Sbjct: 447 LCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 488



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>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score =  116 bits (291), Expect = 4e-26
 Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+   A+F  +  +E    Y+GEG  ++R+ F+ A+  +P+IIF DE D +A  R D  +
Sbjct: 341 ANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESS 400

Query: 183 GADREV-QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
                V +R+L  LL +MDG ++   + V+ ATNR   +D AL+RPGR D  +  P PD 
Sbjct: 401 SNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDL 460

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  + QV T  M L D+VDL       D  + A++  +C+E+G  ++R+N
Sbjct: 461 EARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLREN 512



 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
 Frame = +3

Query: 60  YLGEGPRMVRDVFRLAKENA----PAIIFIDEVDAIATARFDAQTGADREVQRILMELLN 227
           + GE  +++R+ F  A  +A    P++IFIDE+D +   R DA+   D  +   L  L++
Sbjct: 96  HAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARREQDVRIASQLFTLMD 154

Query: 228 QMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL 407
                     V V+ +TNR D +DPAL R GR D  +E   P+   +  + Q+ T K+NL
Sbjct: 155 SNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNL 214

Query: 408 SDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK--NRYVILPKDFE 545
              VDL+      +    AD+ A+C+EA + A ++  +  ++  +DF+
Sbjct: 215 DPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFK 262



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>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score =  116 bits (290), Expect = 6e-26
 Identities = 66/174 (37%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF-DAQ 179
           A   +  F  + GS F++ ++G G   VRD+F +AK+ AP+IIFIDE+DAI  +R     
Sbjct: 230 AGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGM 289

Query: 180 TGADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 356
              + E ++ L +LL +MDGF  +   V V+ ATNR + LDPALLRPGR DR++    PD
Sbjct: 290 ISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPD 349

Query: 357 RRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518
            + +  + +V    + L+++VDL++       ++ AD+  I  EA + A R N+
Sbjct: 350 FKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQ 403



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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  115 bits (289), Expect = 7e-26
 Identities = 65/185 (35%), Positives = 94/185 (50%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F     SEFV+ ++G G   VRD+F  AK  AP I+FIDE+DA+   R     G + E +
Sbjct: 311 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDERE 370

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL +MDGF     V V+ ATNR D LD ALLRPGR DR++    PD   +  + +
Sbjct: 371 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILK 430

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563
           V +    +  +VD E    R    + AD+  +  EA + A R+    I   +        
Sbjct: 431 VHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERI 490

Query: 564 VKKPE 578
           +  PE
Sbjct: 491 IAGPE 495



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>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score =  115 bits (289), Expect = 7e-26
 Identities = 75/191 (39%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFD--A 176
           A      F+ V GSEFV+ ++G G   VRD+F  A+  AP+IIFIDE+DAI   R    A
Sbjct: 342 AGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGA 401

Query: 177 QTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 356
             GA+ E +  L +LL +MDGF  +  V V+  TNR D LD AL+RPGR DR I+   PD
Sbjct: 402 LGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPD 461

Query: 357 RRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKI-------SAADITAICQEAGMHAVRKN 515
              ++ ++ V   ++NL D +  +D  +   K+       + ADI   C EA + A R N
Sbjct: 462 VNGRQQIYLVHLKRLNL-DPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHN 520

Query: 516 RYVILPKDFEK 548
              I    FE+
Sbjct: 521 DPYITIHHFEQ 531



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>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  115 bits (288), Expect = 1e-25
 Identities = 65/185 (35%), Positives = 95/185 (51%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F     SEFV+ ++G G   VRD+F  AK  AP I+FIDE+DA+   R     G + E +
Sbjct: 314 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDERE 373

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL +MDGF     V V+ ATNR D LD ALLRPGR DR++    PD   +  + Q
Sbjct: 374 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 433

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563
           V +    L+ +VD +    R    +  D+  +  EA + A R++   I   +        
Sbjct: 434 VHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERI 493

Query: 564 VKKPE 578
           +  PE
Sbjct: 494 IAGPE 498



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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score =  114 bits (286), Expect = 2e-25
 Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 3/177 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREV 200
           F+ + G EFV+   G G   VR +F+ A+  AP I++IDE+DA+   R    +G ++ E 
Sbjct: 370 FLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEE 429

Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
           ++ L +LL +MDG   T +V V+ +TNRAD LD AL+RPGRLDR +   LP  +++R +F
Sbjct: 430 EQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIF 489

Query: 381 Q--VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545
           +  + + K+  S     +         S ADI  IC EA +HA R+    +   +FE
Sbjct: 490 EQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFE 546



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>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score =  114 bits (286), Expect = 2e-25
 Identities = 63/168 (37%), Positives = 95/168 (56%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A  +   FI V G E + KY+G   + VRD+F  A+   P I+F DE ++IA  R    T
Sbjct: 895  ARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNT 954

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
            G      R++ +LL Q+DG +    V V+ AT+R D +DPALLRPGRLD+ +  P PD+ 
Sbjct: 955  GV---TDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQV 1011

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAV 506
             +  +  V +  + L+D+VDL+   S  D  + AD+ A+   A + A+
Sbjct: 1012 SRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEAL 1059



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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  114 bits (284), Expect = 3e-25
 Identities = 65/182 (35%), Positives = 94/182 (51%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A      F  + GS+FV+ ++G G   VRD+F   K NAP IIFIDE+DA+   R     
Sbjct: 209 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMG 268

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G + E ++ L ++L +MDGF+    V +I ATNR D LD ALLRPGR DR+I    PD  
Sbjct: 269 GGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDIN 328

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V   K+  +  V            S A++  +  EA + A R  +  +   D 
Sbjct: 329 GREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDM 388

Query: 543 EK 548
           E+
Sbjct: 389 EE 390



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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  114 bits (284), Expect = 3e-25
 Identities = 65/182 (35%), Positives = 94/182 (51%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A      F  + GS+FV+ ++G G   VRD+F   K NAP IIFIDE+DA+   R     
Sbjct: 209 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMG 268

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G + E ++ L ++L +MDGF+    V +I ATNR D LD ALLRPGR DR+I    PD  
Sbjct: 269 GGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDIN 328

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V   K+  +  V            S A++  +  EA + A R  +  +   D 
Sbjct: 329 GREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDM 388

Query: 543 EK 548
           E+
Sbjct: 389 EE 390



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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  113 bits (282), Expect = 5e-25
 Identities = 64/185 (34%), Positives = 95/185 (51%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F     SEFV+ ++G G   VR +F  AK  AP I+FIDE+DA+   R     G + E +
Sbjct: 291 FFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDERE 350

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL +MDGF     V V+ ATNR D LD ALLRPG+ DR++    PD   +  + Q
Sbjct: 351 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQ 410

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTN 563
           V +    L+ +VD +    R    + AD+  +  EA + A R++   I   +        
Sbjct: 411 VHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 470

Query: 564 VKKPE 578
           +  PE
Sbjct: 471 IAGPE 475



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>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score =  112 bits (281), Expect = 6e-25
 Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 10/194 (5%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+ + A FI + G E + KY+GE  R +R VF  A+ + P +IF DE+DA+   R    T
Sbjct: 588  ANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRR---DT 644

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
                   R++  LL ++DG +    + VI ATNR D +DPA+LRPGRLD+ +   LP+  
Sbjct: 645  SLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTE 704

Query: 363  QKRLVFQVCTAKMN--LSDEVDLEDYV--SRPDKISAADITAICQEAGMHAVRKNRY--- 521
            +K  + +  T      LS +VD E+ +   + +  S AD+ A+ +E+ + A+++  +   
Sbjct: 705  EKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSE 764

Query: 522  ---VILPKDFEKGY 554
                +L  D +K +
Sbjct: 765  EIQSVLDNDLDKEF 778



 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           FI +     V    GE  + +RD+F  A+  AP ++F DE+DAI   R     GA RE++
Sbjct: 267 FISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR---DGGAQREME 323

Query: 204 R-ILMELLNQMDGFDQTVN----VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
           R I+ +LL  MD           V +I ATNR D+LD AL R GR DR+I   +P+   +
Sbjct: 324 RRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSR 383

Query: 369 RLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
             + +  +  + +   +D             AD+ A+   AG  A+++
Sbjct: 384 LHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKR 431



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>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score =  111 bits (277), Expect = 2e-24
 Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF-DAQTGADREV 200
           F  + GS F++ ++G G   VRD+F  AK+ AP+IIFIDE+DAI  +R        + E 
Sbjct: 231 FFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDER 290

Query: 201 QRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 377
           ++ L +LL +MDGF  +   V V+ ATNR + LDPAL+RPGR DR++    PD   +  +
Sbjct: 291 EQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEI 350

Query: 378 FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518
            +V    + L+++V+L++       ++ AD+  I  EA + A R N+
Sbjct: 351 LKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQ 397



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>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score =  110 bits (276), Expect = 2e-24
 Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF-DAQTGADREV 200
           F  + GS F++ ++G G   VRD+F  AK+ AP+IIFIDE+DAI  +R        + E 
Sbjct: 231 FFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDER 290

Query: 201 QRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 377
           ++ L +LL +MDGF  +   V V+ ATNR + LDPAL+RPGR DR++    PD   +  +
Sbjct: 291 EQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEI 350

Query: 378 FQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518
            +V    + L+++V+L++       ++ AD+  I  EA + A R N+
Sbjct: 351 LKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQ 397



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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score =  107 bits (267), Expect = 3e-23
 Identities = 63/174 (36%), Positives = 95/174 (54%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  + GSEF + Y+G G + +RD+F  A+  APAIIFIDE+DAI   R        ++  
Sbjct: 342 FFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAYAKQT- 400

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
             L +LL ++DGF QT  + +I ATN  + LD AL RPGR D+ +   LPD R +  + +
Sbjct: 401 --LNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILK 458

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545
               K+ L+D VD          +S A++  +  +A ++A +KN   +    FE
Sbjct: 459 HHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFE 512



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>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score =  107 bits (266), Expect = 3e-23
 Identities = 60/163 (36%), Positives = 88/163 (53%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            FI + G E + KY+G   + VR++F  A+   P I+F DE D+IA  R    TG      
Sbjct: 861  FISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV---TD 917

Query: 204  RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
            R++ ++L QMDG +    V V+ AT+R D +D ALLRPGRLD+ +   +PD   +  + Q
Sbjct: 918  RVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQ 977

Query: 384  VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
              T  MN+S  V+L          S AD+ A+   A + AV +
Sbjct: 978  SVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHE 1020



 Score = 31.2 bits (69), Expect = 2.4
 Identities = 24/139 (17%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
 Frame = +3

Query: 90  DVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILME-LLNQMDGFDQTVN--V 260
           D+F      AP+++ ++++D++  A    Q  +D    R L E  ++++    QT+N  +
Sbjct: 569 DIFSEVSWKAPSLLILEDLDSLIPAE---QEHSDSSQSRQLSEYFISKLSA--QTINRDI 623

Query: 261 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL--SDEVDLEDY 434
            ++ ++   ++L+  +     ++   +   PD+  ++ + Q     +N+  S+   L + 
Sbjct: 624 TILASSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNI 683

Query: 435 VSRPDKISAADITAICQEA 491
               +     D+  +C  A
Sbjct: 684 AVETEGYLPKDLKVLCDRA 702



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>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 981

 Score =  105 bits (263), Expect = 8e-23
 Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A   +  F+ V G E +  Y+G+    VR+VF  A+  AP IIF DE+D++A +R   ++
Sbjct: 759  ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR--GRS 816

Query: 183  GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            G    V  R++ +LL ++DG   T +V VI ATNR D LDPALLRPGR D+ +     + 
Sbjct: 817  GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 876

Query: 360  RQKRL-VFQVCTAKMNLSDEVDLEDYVS-RPDKISAADITAICQEAGMHAVRKNRYVILP 533
            R  +L V    T K  L   V L + +   P +++ AD+ ++C +A M A+++       
Sbjct: 877  RASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRR-----V 931

Query: 534  KDFEKG 551
            +D E+G
Sbjct: 932  RDLEEG 937



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>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 978

 Score =  105 bits (262), Expect = 1e-22
 Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A   +  F+ V G E +  Y+G+    VR+VF  A+  AP IIF DE+D++A +R   ++
Sbjct: 756  ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR--GRS 813

Query: 183  GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            G    V  R++ +LL ++DG   T +V VI ATNR D LDPALLRPGR D+ +     + 
Sbjct: 814  GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873

Query: 360  RQKRL-VFQVCTAKMNLSDEVDLEDYVS-RPDKISAADITAICQEAGMHAVRKNRYVILP 533
            R  +L V    T K  L   V L + +   P +++ AD+ ++C +A M A+++       
Sbjct: 874  RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRR-----V 928

Query: 534  KDFEKG 551
            +D E+G
Sbjct: 929  RDLEEG 934



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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score =  105 bits (261), Expect = 1e-22
 Identities = 60/164 (36%), Positives = 87/164 (53%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F    GSEF +  +G+G R VRD+F  AK  AP IIFIDE+D++ + R            
Sbjct: 262 FFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKR--VSNSIHPYAN 319

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL++MDGF +   + VI ATNR D LD ALLRPGR D ++  P PD   +  +F 
Sbjct: 320 QTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFN 379

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
              +K+  S  +D +         + ADI  +  +A + A   N
Sbjct: 380 FYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDN 423



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>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score =  105 bits (261), Expect = 1e-22
 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
 Frame = +3

Query: 21  AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 200
           AF    G++ + K++GE  R +R +F  A +  PAIIF DE+D +A  R   Q   D+  
Sbjct: 147 AFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVRSSRQ---DQIH 203

Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
             I+  LL  MDG D    + VI ATNR D++DPAL RPGR DR+  F LPD+  ++ + 
Sbjct: 204 SSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEIL 263

Query: 381 QVCTAKMNLSD-EVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           ++ T   N    ++ LE+          ADI +IC EA + A+R+
Sbjct: 264 KIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRR 308



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>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 980

 Score =  104 bits (260), Expect = 2e-22
 Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A   +  F+ V G E +  Y+G+    VR+VF  A+  AP IIF DE+D++A +R   ++
Sbjct: 758  ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR--GRS 815

Query: 183  GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            G    V  R++ +LL ++DG   T +V VI ATNR D LDPALLRPGR D+ +     + 
Sbjct: 816  GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 875

Query: 360  RQKRL-VFQVCTAKMNLSDEVDLEDYVS-RPDKISAADITAICQEAGMHAVRKNRYVILP 533
            R  +L V    T K  L   V L + +   P +++ AD+ ++C +A M A  K R   L 
Sbjct: 876  RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDA-MTAALKRRVHDLE 934

Query: 534  KDFEKG 551
            +  E G
Sbjct: 935  EGLEPG 940



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>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score =  104 bits (260), Expect = 2e-22
 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 1/178 (0%)
 Frame = +3

Query: 39  GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILME 218
           G++ + K++GE  R +R +F  AK++ P+IIF DE+D +A  R   Q      +   L+ 
Sbjct: 485 GADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLA 544

Query: 219 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAK 398
           L   MDG D    V VI ATNR D +DPAL RPGR DR+  FPLPD + +  + Q+ T K
Sbjct: 545 L---MDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRK 601

Query: 399 MNLSDEVDLEDYVSRPDK-ISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 569
            +     +  D ++   K    AD+ ++C EA + +++++        F + YR+N K
Sbjct: 602 WSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRS--------FPQIYRSNDK 651



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>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score =  104 bits (259), Expect = 2e-22
 Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 8/198 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200
           F  V  +    KY GE  ++VR +F +A+  AP+ IFIDE+D+I + R    TG++ E  
Sbjct: 295 FFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKR---GTGSEHEAS 351

Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +R+  ELL QMDG        + +  V V+ ATN    +D AL R  RL+++I  PLP+ 
Sbjct: 352 RRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPEI 409

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
             +  + ++   ++ L+D++DL+    + D  S ADIT +C++A M A+R+    + P++
Sbjct: 410 DGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRRRIQGLRPEE 469

Query: 540 FEKGYRTNVKKPESDFDF 593
                +  + +P +  DF
Sbjct: 470 IRHIPKEELNQPSTPADF 487



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>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score =  103 bits (257), Expect = 4e-22
 Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
 Frame = +3

Query: 21  AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 200
           AF    G++ + K++GE  R +R +F  A +  P+IIF DE+D +A  R   Q   D+  
Sbjct: 492 AFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQ---DQIH 548

Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
             I+  LL  MDG D    + VI ATNR D++DPAL RPGR DR+  F LPD+  ++ + 
Sbjct: 549 SSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEIL 608

Query: 381 QVCTAKMNLSD-EVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           ++ T   N    +  LE+          ADI +IC EA + A+R+
Sbjct: 609 KIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRR 653



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>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score =  103 bits (257), Expect = 4e-22
 Identities = 62/171 (36%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A+   A F+ + G+E + KY+GE    +R +F+ A+  AP +IF DEVDA+ T+R   + 
Sbjct: 583  ANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSR--GKE 640

Query: 183  GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
            GA   V+R+L + L ++DG ++  NV VI ATNR D +DPA LRPGR    +  PLP+  
Sbjct: 641  GA-WVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNAD 698

Query: 363  QKRLVFQVCTAKMNLSDEVDLEDYV-SRPDKISAADITAICQEAGMHAVRK 512
            ++  + +    K  +   VDL+    +  +  S AD+  + Q+A   AV +
Sbjct: 699  ERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEE 749



 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A+     F ++  +E +    G     +R++F  A   AP+I+FIDE+DAI + R + Q 
Sbjct: 288 ANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQR 347

Query: 183 GADREVQRILMELLNQMDGFDQTVN----------VKVIMATNRADTLDPALLRPGRLDR 332
             ++   RI+ +LL  MDG     +          V VI ATNR D LDPAL R GR + 
Sbjct: 348 EMEK---RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFET 404

Query: 333 KIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +I    PD   +  +  V   K+ L    D +           AD+ ++   AG  A+++
Sbjct: 405 EIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKR 464



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>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score =  103 bits (256), Expect = 5e-22
 Identities = 62/165 (37%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
 Frame = +3

Query: 21  AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 200
           AF    G++ + K++GE  R +R +F  A +  P+IIF DE+D +A  R   Q   D+  
Sbjct: 323 AFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQ---DQIH 379

Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
             I+  LL  MDG D    + VI ATNR D +DPAL RPGR DR+  F LPD+  ++ + 
Sbjct: 380 SSIVSTLLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEIL 439

Query: 381 QVCTAKMNLSD-EVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           ++ T   N    +  LE+          ADI +IC EA + A+R+
Sbjct: 440 KIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAALCALRR 484



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>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score =  102 bits (254), Expect = 9e-22
 Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
 Frame = +3

Query: 21  AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV 200
           AF    G++ + K++GE  R +R +F  A    P+IIF DE+D +A  R   Q   D+  
Sbjct: 457 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQ---DQIH 513

Query: 201 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
             I+  LL  MDG D    V VI ATNR DTLDPAL RPGR DR++ F LPD   +R + 
Sbjct: 514 ASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQIL 573

Query: 381 QVCTAKMNLSDEV--DLEDYVSRPDKISAADITAICQEAGMHAVRKNRY 521
            + T+K   +  +   L+    R      AD+  +C EA +  +R +RY
Sbjct: 574 DIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLR-SRY 621



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>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score =  101 bits (251), Expect = 2e-21
 Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF---DAQTGADR 194
            F  V G E +  Y+GE    VR VF+ A++  P ++F DE+D++A  R    D+    DR
Sbjct: 1055 FFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDR 1114

Query: 195  EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             V ++L EL     G D +  V VI ATNR D LDPALLRPGR D+ +   + D   K+L
Sbjct: 1115 IVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQL 1174

Query: 375  -VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512
             + +  T K  L   V L     + P   + AD  A+C +A + AV +
Sbjct: 1175 KILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTR 1222



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>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1017

 Score =  101 bits (251), Expect = 2e-21
 Identities = 61/166 (36%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            F  V G E +  Y+GE    VR VF+ A++  P +IF DEVD++A  R + Q  +   + 
Sbjct: 779  FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKRGN-QGDSGGVMD 837

Query: 204  RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-V 377
            RI+ +LL ++DG     + V +I ATNR D LD ALLRPGR D+ I   + D R+K+  +
Sbjct: 838  RIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANI 897

Query: 378  FQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512
             +  T K  +S +++ ++ VS  P   + AD  A+C +A + A+ +
Sbjct: 898  MRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTR 943



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>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score =  100 bits (250), Expect = 2e-21
 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200
           F  V  S    KY GE  ++VR +F +A+  +PA IFIDE+D+I + R    T  + E  
Sbjct: 270 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEAS 326

Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +R+  ELL QMDG        D +  V V+ ATN    +D AL R  RL+++I  PLP  
Sbjct: 327 RRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSA 384

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           + +  + ++   ++ L+D+VDL       +  S ADIT +C++A + A+R+    + P++
Sbjct: 385 KGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 444

Query: 540 FEKGYRTNVKKPESDFDF 593
                +  +  P +  DF
Sbjct: 445 IRNLSKEEMHMPTTMEDF 462



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>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score =  100 bits (250), Expect = 2e-21
 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200
           F  +  S    KY GE  ++VR +F +A+  AP  IFIDE+D+I + R    T  + E  
Sbjct: 267 FFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSEEHEAS 323

Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +R+  ELL QMDG        D +  V V+ ATN    +D AL R  RL+++I  PLP  
Sbjct: 324 RRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSA 381

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           + +  + ++   ++ L+D+V++E      D  S ADIT +C++A + A+R+    + P++
Sbjct: 382 KGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEE 441

Query: 540 FEKGYRTNVKKPESDFDF 593
                R ++  P +  DF
Sbjct: 442 IRNLSRDDMHMPTTMEDF 459



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>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score =  100 bits (248), Expect = 4e-21
 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200
           F  V  S    KY GE  ++VR +F +A+  +PA IFIDE+D+I + R    T  + E  
Sbjct: 270 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEAS 326

Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +R+  ELL QMDG        D +  V V+ ATN    +D AL R  RL+++I  PLP  
Sbjct: 327 RRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSA 384

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           + +  + ++   ++ L+D+V+L       +  S ADIT +C++A + A+R+    + P++
Sbjct: 385 KGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 444

Query: 540 FEKGYRTNVKKPESDFDF 593
                R  +  P +  DF
Sbjct: 445 IRNLSREEMHMPTTMEDF 462



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>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS8)
          Length = 1030

 Score = 99.8 bits (247), Expect = 6e-21
 Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            F  V G E +  Y+GE    VR VF+ A+E  P +IF DE+D++A  R + Q  +   + 
Sbjct: 793  FFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGN-QGDSGGVMD 851

Query: 204  RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-V 377
            RI+ +LL ++DG     + V VI ATNR D LD ALLRPGR D+ +   +PD   K+L +
Sbjct: 852  RIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNI 911

Query: 378  FQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512
             +  T K  L ++V L +     P   + AD  A+C +A ++A+ +
Sbjct: 912  LEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMSR 957



 Score = 29.6 bits (65), Expect = 7.0
 Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
 Frame = +3

Query: 117 APAIIFIDEVDAIATARFDAQTGADREV----QRILMELLNQMDGFD-QTVNVKVIMATN 281
           +PA+IF+  +D+I     D     D E     + I  E+   +D F  +      + + N
Sbjct: 541 SPAVIFLAHLDSIL---LDVNANQDPEAIKLQKSINFEMSKLLDDFTFKFPGTTFVGSVN 597

Query: 282 RADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISA 461
             D +  +     R +  I  P+P   Q+  +FQ   +   L+ +V  +  VS  D IS 
Sbjct: 598 NIDNVPSSFRSHMRFE--ILVPVPSEAQRLRIFQWYLSSHELNRDVQQKVPVSYMDNISF 655

Query: 462 ADITA 476
           + +++
Sbjct: 656 SSLSS 660



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>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200
           F  V  S    KY GE  ++VR +F +A+  +PA IFIDE+D+I + R    T  + E  
Sbjct: 270 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEAS 326

Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +R+  ELL QMDG        D +  V V+ ATN    +D AL R  RL+++I  PLP  
Sbjct: 327 RRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSA 384

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           + +  + ++   ++ L+D+V+L       +  S ADIT +C++A + A+R+    + P++
Sbjct: 385 KGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEE 444

Query: 540 FEKGYRTNVKKPESDFDF 593
                R  +  P +  DF
Sbjct: 445 IRNLSREAMHMPTTMEDF 462



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>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS5)
          Length = 1165

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 5/190 (2%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF---DAQTGADR 194
            F  V G E +  Y+GE    VR VF+ A++  P ++F DE+D++A  R    D++   DR
Sbjct: 880  FFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSVAPKRGNQGDSEGVMDR 939

Query: 195  EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR- 371
             V ++L EL + M G D    V V+ ATNR D LD ALLRPGR D+ +   + D  +K+ 
Sbjct: 940  IVSQLLAEL-DGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQS 998

Query: 372  LVFQVCTAKMNLSDEVDLEDYV-SRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEK 548
             + +  + K +L   VDL+    S P   + AD  A+C +A ++A+ +    I     EK
Sbjct: 999  KIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAMTR----IANTVDEK 1054

Query: 549  GYRTNVKKPE 578
              R N + PE
Sbjct: 1055 IKRYNEELPE 1064



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>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200
           F  V  S    KY GE  ++VR +F +A+  AP  IFIDE+D+I + R    T  + E  
Sbjct: 269 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEAS 325

Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +R+  ELL QMDG        D +  V V+ ATN    +D AL R  RL+++I  PLP  
Sbjct: 326 RRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTA 383

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           + +  + ++   ++ L  ++ LED   + +  S ADIT +C++A + A+R+    + P++
Sbjct: 384 KGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEE 443

Query: 540 FEKGYRTNVKKPESDFDF 593
                +  ++ P +  DF
Sbjct: 444 IRALSKEELQMPVTKGDF 461



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>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF---DAQTGADR 194
            F  V G E +  Y+GE    VR VF+ A++  P ++F DE+D++A  R    D+    DR
Sbjct: 1052 FFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDR 1111

Query: 195  EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             V ++L EL     G      V VI ATNR D LDPALLRPGR D+ +   + D   K++
Sbjct: 1112 IVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQV 1171

Query: 375  -VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRKNRYVI 527
             + +  T K  L   V L     R P   + AD  A+C +A + AV +   ++
Sbjct: 1172 TIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAVTRQATLV 1224



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>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAY4)
          Length = 1024

 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            F  V G E +  Y+GE    VR VF+ A++  P ++F DE+D++A  R + Q  +   + 
Sbjct: 780  FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQRGN-QGDSGGVMD 838

Query: 204  RILMELLNQMDGFDQT--VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK-RL 374
            RI+ +LL ++DG        V V+ ATNR D LD ALLRPGR D+ +   + D  +K + 
Sbjct: 839  RIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQT 898

Query: 375  VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512
            + +  T K  L+ +V LE    R P   + AD  A+C +A ++A+ +
Sbjct: 899  IMEALTRKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLNAMTR 945



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>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 97.1 bits (240), Expect = 4e-20
 Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F  V  +    K+ GE  RMVR +F LA+  AP+ IFIDE+D++  +R    +G     +
Sbjct: 300 FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR--GGSGEHESSR 357

Query: 204 RILMELLNQMDGFDQTVN--------VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           R+  ELL Q+DG   T          V V+ ATN    +D AL R  RL+++I  PLPD 
Sbjct: 358 RVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDF 415

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
             ++ +  +    + ++ +V++ED   R +  S  D+T +C++A M+ +R+
Sbjct: 416 ESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRR 466



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>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 97.1 bits (240), Expect = 4e-20
 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200
           F  V  S    KY GE  ++VR +F +A+  AP  IFIDE+D+I + R    T  + E  
Sbjct: 267 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEAS 323

Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +R+  ELL QMDG        D +  V V+ ATN    +D AL R  RL+++I  PLP  
Sbjct: 324 RRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTA 381

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           + +  + ++   ++ L  +V LED   + +  S ADIT IC++A + A+R+    + P++
Sbjct: 382 KGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEE 441

Query: 540 FEKGYRTNVKKP 575
                +  ++ P
Sbjct: 442 IRALSKEELQMP 453



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>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1021

 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            F  V G E +  Y+GE    VR VF+ A++  P +IF DE+D++A  R + Q  +   + 
Sbjct: 784  FFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGN-QGDSGGVMD 842

Query: 204  RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-V 377
            RI+ +LL ++DG     + + VI ATNR D LD ALLRPGR D+ +   + D  +K+  +
Sbjct: 843  RIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANI 902

Query: 378  FQVCTAKMNLSDEVDLEDY-VSRPDKISAADITAICQEAGMHAVRK 512
             +  T K  L  +V L+D   S P   + AD  A+C +A ++A+ +
Sbjct: 903  LRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAMTR 948



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>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV- 200
           F  V  S    KY GE  ++VR +F +A+  AP  IFIDE+D+I + R    T  + E  
Sbjct: 267 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSDEHEAS 323

Query: 201 QRILMELLNQMDGF-------DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +R+  ELL QMDG        D +  V V+ ATN    +D AL R  RL+++I  PLP  
Sbjct: 324 RRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTA 381

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKD 539
           + +  + ++   ++ L  ++ LED   + +  S ADIT IC++A + A+R+    + P++
Sbjct: 382 KGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEE 441

Query: 540 FEKGYRTNVKKP 575
                +  ++ P
Sbjct: 442 IRALSKEELQMP 453



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>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494|
          Length = 371

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 56/183 (30%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR-FDAQ 179
           A  T ++FI V   E + +++G+  +M+R++++ A E+AP I+FIDE+DAI  +R + + 
Sbjct: 175 ATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAIGLSREYQSL 234

Query: 180 TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            G   +V  ++  LL ++DG  +   V  I ATN    LDPA+    R + +IEF LP+ 
Sbjct: 235 RG---DVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPND 289

Query: 360 RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMH-AVRKNRYVILPK 536
            ++  + ++   KM L  + +L+++V +    S  DI     +  +H A+ ++R  +  +
Sbjct: 290 EERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIKEKFLKPALHRAILEDRDYVSKE 349

Query: 537 DFE 545
           D E
Sbjct: 350 DLE 352



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>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1000

 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 3/166 (1%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            F  V G E +  Y+GE    VR VF+ A++  P +IF DE+D++A  R + Q  +   + 
Sbjct: 763  FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGN-QGDSGGVMD 821

Query: 204  RILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-V 377
            RI+ +LL ++DG     + V VI ATNR D LD ALLRPGR D+ +   + D  +K+  +
Sbjct: 822  RIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANI 881

Query: 378  FQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512
             +  T K  L   +D+ D   + P   + AD  A+C +A ++A+ +
Sbjct: 882  IKALTRKFTLESGIDILDIAKKCPFNYTGADFYALCSDALLNAMTR 927



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>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1198

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            F  V G E +  Y+GE    VR VF+ A++  P +IF DE+D++A  R + Q  +   + 
Sbjct: 900  FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGN-QGDSGGVMD 958

Query: 204  RILMELLNQMDGFDQTV-----NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
            RI+ +LL ++DG           V V+ ATNR D LD ALLRPGR D+ +   + D  +K
Sbjct: 959  RIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEK 1018

Query: 369  R-LVFQVCTAKMNLSDEVDLEDYVSRPD-KISAADITAICQEAGMHAVRK 512
            +  + +  T K  L+D VDL +   R     + AD  A+C ++ ++A+ +
Sbjct: 1019 QSKILEALTRKFKLADNVDLYEIAKRCSFTFTGADFYALCSDSMLNAMTR 1068



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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 55/174 (31%), Positives = 91/174 (52%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F    GSEF + ++G G   +R++FR AK NAP +IFIDE+D++   R ++        +
Sbjct: 400 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYS--R 457

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL +MDGF     V +I ATN  + LD AL+RPGR D ++  P PD + +  + +
Sbjct: 458 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 517

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545
               K+     VD E         S A++  +  +A + A    + ++  K+ E
Sbjct: 518 WYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 571



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>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR---FDAQTGADR 194
            F  V G E +  Y+GE    VR VF+ A++  P +IF DE+D++A  R    D+    DR
Sbjct: 874  FFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDR 933

Query: 195  EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             V ++L E L+ M G +    V V+ ATNR D LD ALLRPGR D+ +   + D  +K+ 
Sbjct: 934  IVSQLLAE-LDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQA 992

Query: 375  -VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512
             + Q  T K  L   VDL       P   + AD  A+C +A ++A+ +
Sbjct: 993  KIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAMTR 1040



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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 55/174 (31%), Positives = 91/174 (52%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F    GSEF + ++G G   +R++FR AK NAP +IFIDE+D++   R +         +
Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPMHPYS--R 399

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + +++LL +MDGF     V +I ATN  + LD AL+RPGR D ++  P PD + +  + +
Sbjct: 400 QTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 459

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545
               K+     VD E         S A++  +  +A + A    + ++  K+ E
Sbjct: 460 WYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513



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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 55/174 (31%), Positives = 91/174 (52%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F    GSEF + ++G G   +R++FR AK NAP +IFIDE+D++   R ++        +
Sbjct: 342 FYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYS--R 399

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL +MDGF     V +I ATN  + LD AL+RPGR D ++  P PD + +  + +
Sbjct: 400 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 459

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFE 545
               K+     VD E         S A++  +  +A + A    + ++  K+ E
Sbjct: 460 WYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELE 513



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>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF---DAQTGADR 194
            F  V G E +  Y+GE    VR VF+ A++  P ++F DE+D++A  R    D+    DR
Sbjct: 1091 FFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDR 1150

Query: 195  EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD-RRQKR 371
             V ++L EL     G + +  V VI ATNR D LD ALLRPGR D+ +   + D  R++ 
Sbjct: 1151 IVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQA 1210

Query: 372  LVFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512
             + +  T K  L  +V L+    + P   + AD+ A+C +A + A+ +
Sbjct: 1211 TILEALTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR 1258



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>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 948

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            F+ + G E +  Y+GE    VR+VF  A+ ++P +IF DE+D+IA  R ++ + +   + 
Sbjct: 716  FVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNS-SDSGNVMD 774

Query: 204  RILMELLNQMDGFDQTVN--VKVIMATNRADTLDPALLRPGRLDRKIEFPL-PDRRQKRL 374
            R++ +LL ++D   +  N  V VI ATNR D LDP+LLRPGR D+ +   +      K  
Sbjct: 775  RVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKAS 834

Query: 375  VFQVCTAKMNLSDEVDLEDYVSR-PDKISAADITAICQEAGMHAVRK 512
            + +  T    L + +DL +         + AD+ A+C +A + A+++
Sbjct: 835  MLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKR 881



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>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 2/167 (1%)
 Frame = +3

Query: 18  AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197
           + F  +  S+ V K+LGE  ++V+++F+LA+EN P+IIFIDE+D++  +R + ++ A R 
Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAAR- 252

Query: 198 VQRILMELLNQMDGFD-QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             RI  E L QM G       + V+ ATN    LD A+ R  R +++I  PLP+   +  
Sbjct: 253 --RIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAA 308

Query: 375 VFQV-CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +F++   +  N   E D ++   + D  S ADI+ I ++A M  VRK
Sbjct: 309 MFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRK 355



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>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
 Frame = +3

Query: 24   FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
            FI V G E + K++G   + +R++F  A+   P I+F DE D+IA  R    TG      
Sbjct: 759  FISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGV---TD 815

Query: 204  RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
            R++ +LL QMDG +    V ++ AT+R D +D ALLRPGRLD+ +   +P   ++  + Q
Sbjct: 816  RVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQ 875

Query: 384  VCT---------AKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
                         K  L    DL+    +    S AD+  +C  A + +V +
Sbjct: 876  AIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHR 927



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>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 824

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 12/172 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVFRLAKE--------NAPAIIFIDEVDAIATARFDAQTGA 188
           V G + + KY+GE    VR +F  A+E        +   II  DE+DAI   R  +  G+
Sbjct: 362 VNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQR-GSMAGS 420

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 ++ +LL++MDG +Q  N+ VI  TNR D +D ALLRPGRL+ ++E  LPD   +
Sbjct: 421 SSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGR 480

Query: 369 RLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
             + ++ TA+M     +   VDLED   R    S A++  + + A   A+ +
Sbjct: 481 LQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNR 532



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>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVFRLAK--------ENAPAIIFIDEVDAIATARFDAQTGA 188
           V G E + KY+G+    VR +F  A+        E+   II  DE+DAI   R    +G 
Sbjct: 336 VNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR--GSSGG 393

Query: 189 DREV-QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 365
           D  V  +++ +LL +MDG DQ  N+ VI  TNR D +D ALLRPGRL+  +E  LPD   
Sbjct: 394 DTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHG 453

Query: 366 KRLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILP 533
           +  + ++ T++M     L ++VD+E+  S     S A+I  + + A   A  ++  V   
Sbjct: 454 RLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTT 513

Query: 534 KDFEKGYRTNVKKPESDF 587
                G   N+K   +DF
Sbjct: 514 AAV-SGNLENIKVNRNDF 530



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>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 12/197 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVFRLAKENAPA--------IIFIDEVDAIATARFDAQTGA 188
           V G E + K++GE  + VRD+F  A+++           +I  DE+DAI  +R   + G 
Sbjct: 282 VNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGT 341

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 I+ +LL ++DG +   NV +I  TNR D LD ALLRPGRL+ ++E  LPD   +
Sbjct: 342 GVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGR 400

Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPK 536
             + Q+ T KM     L  +++L++  +R    S A++  + + A  +A+  NR + +  
Sbjct: 401 LQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYAL--NRQLSMDD 458

Query: 537 DFEKGYRTNVKKPESDF 587
             +     N+K    DF
Sbjct: 459 LTKPVEEENIKITMEDF 475



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>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
 Frame = +3

Query: 18  AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197
           + F  +  S+ V K+LGE  ++V+++F+LA+EN P+IIFIDE+D++  +R + ++ A R 
Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAAR- 252

Query: 198 VQRILMELLNQMDGFD-QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             RI  E L QM G       + V+ ATN    LD A+ R  R +++I  PLP+   +  
Sbjct: 253 --RIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAA 308

Query: 375 VFQV-CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +F++      N   E D  +   + D  S ADI+ I ++A M  VRK
Sbjct: 309 MFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355



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>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18|
          Length = 758

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 12/172 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVFRLAK--------ENAPAIIFIDEVDAIATARFDAQTGA 188
           V G E + KY+G     +R++F+ A+        E++  II  DE+D++   R     G 
Sbjct: 306 VNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGT 365

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 ++ +LL +MDG DQ  N+ VI  TNR D +D ALLRPGR + ++E  LPD + +
Sbjct: 366 GVG-DNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGR 424

Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
             +F + T KM     +SD+V+L +  +     S A+I  + + A   A+ K
Sbjct: 425 LQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINK 476



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>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 52/173 (30%), Positives = 94/173 (54%), Gaps = 12/173 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVFRLAK--------ENAPAIIFIDEVDAIATARFDAQTGA 188
           V G E + KY+G     +R++F+ A+        ++   +I  DE+D++   R   ++  
Sbjct: 342 VNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGSGKSDG 401

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 ++ +LL++MDG DQ  N+ VI  TNR D +D ALLRPGR + +IE  LPD + +
Sbjct: 402 TGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGR 461

Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
           + +F + T K+     LS +V+ ++  +     + A+I  +C  A  +A+ ++
Sbjct: 462 KDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRH 514



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>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c|
          Length = 609

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 51/123 (41%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA----PAIIFIDEVDAIATARF 170
           AH   + F+ + G E + K++GE  R +R +F+ A+E A    P I+F DE+D+I   R 
Sbjct: 322 AHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR- 380

Query: 171 DAQTGADREVQR-ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 347
              TG   +V+  ++ +LL+++DG +   NV VI A+NR D +DPA+LRPGRLD KI+  
Sbjct: 381 --GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIE 438

Query: 348 LPD 356
            PD
Sbjct: 439 RPD 441



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>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175|
          Length = 609

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 51/123 (41%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA----PAIIFIDEVDAIATARF 170
           AH   + F+ + G E + K++GE  R +R +F+ A+E A    P I+F DE+D+I   R 
Sbjct: 322 AHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR- 380

Query: 171 DAQTGADREVQR-ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 347
              TG   +V+  ++ +LL+++DG +   NV VI A+NR D +DPA+LRPGRLD KI+  
Sbjct: 381 --GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIE 438

Query: 348 LPD 356
            PD
Sbjct: 439 RPD 441



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>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188
           V G E + KY+GE    +R +F        RL   +   II  DE+DAI   R  +  G+
Sbjct: 285 VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR-GSMAGS 343

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 ++ +LL+++DG +Q  N+ VI  TNR D +D ALLRPGRL+ K+E  LPD + +
Sbjct: 344 TGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGR 403

Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  + TA+M     LS +VD+++        S A++  + + A   A+ ++
Sbjct: 404 LQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRH 456



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>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188
           V G E + KY+GE    +R +F        RL   +   II  DE+DAI   R  +  G+
Sbjct: 285 VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR-GSMAGS 343

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 ++ +LL+++DG +Q  N+ VI  TNR D +D ALLRPGRL+ K+E  LPD + +
Sbjct: 344 TGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGR 403

Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  + TA+M     LS +VD+++        S A++  + + A   A+ ++
Sbjct: 404 LQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRH 456



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>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188
           V G E + KY+GE    +R +F        RL   +   II  DE+DAI   R  +  G+
Sbjct: 285 VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR-GSMAGS 343

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 ++ +LL+++DG +Q  N+ VI  TNR D +D ALLRPGRL+ K+E  LPD + +
Sbjct: 344 TGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGR 403

Query: 369 RLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
             +  + TA+M     LS +VD+++        S A++  + + A   A+ ++
Sbjct: 404 LQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRH 456



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>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A    + F  V  S+ V K++GE  ++V+ +F +A+EN P+IIFIDEVDA+   R + ++
Sbjct: 187 ATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGES 246

Query: 183 GADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
            A R   RI  ELL QM+G  + +  V V+ ATN    LD A+ R  R +R+I  PLPD 
Sbjct: 247 EASR---RIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDL 301

Query: 360 RQKRLVFQVCTAKMNLSDE---VDLEDY---VSRPDKISAADITAICQEAGMHAVRK 512
             +  +F++     N+ D    +  EDY    +  +  S +DI  + ++A M  +RK
Sbjct: 302 AARTTMFEI-----NVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRK 353



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>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 4/174 (2%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  +++ F  V  ++   K+ G+  ++VR +F LA+  AP+IIFIDE+D +   R    +
Sbjct: 247 ASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR--GNS 304

Query: 183 GADREVQRILMELLNQMDG----FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 350
           G     +R+  E L QMDG    FD    V V+ ATN    LD AL R  R +++I  PL
Sbjct: 305 GEHEASRRVKSEFLVQMDGSQNKFDSR-RVFVLAATNIPWELDEALRR--RFEKRIFIPL 361

Query: 351 PDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           PD   ++ + +        SDE++ +D  +R +  S AD+ ++C+ A ++ +R+
Sbjct: 362 PDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRR 415



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>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 56/168 (33%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
 Frame = +3

Query: 18  AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197
           + F  +  S+ V K++GE  R+VR +F +A+E  P+IIFIDE+D++  +R + ++ + R 
Sbjct: 188 STFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSR- 246

Query: 198 VQRILMELLNQMDGFDQTVN-VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             RI  E L QM+G  +  + V V+ ATN   TLD A+ R  R +++I  PLP+   +  
Sbjct: 247 --RIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARAR 302

Query: 375 VFQVCTAKM--NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +F++   K+   L+ + D ++     D  S +DI+ + ++A M  VR+
Sbjct: 303 MFELNVGKIPSELTSQ-DFKELAKMTDGYSGSDISIVVRDAIMEPVRR 349



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>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316|
          Length = 609

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA----PAIIFIDEVDAIATARF 170
           A    + F+ + G E + K++GE  R +R +F+ A+E A    P I+F DE+D+I   R 
Sbjct: 322 AREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR- 380

Query: 171 DAQTGADREVQR-ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP 347
              TG   +V+  ++ +LL+++DG +   NV VI A+NR D +DPA+LRPGRLD KI+  
Sbjct: 381 --GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIE 438

Query: 348 LPD 356
            PD
Sbjct: 439 RPD 441



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>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 13/195 (6%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A  + + F  V  S  + KYLGE  ++VR +F +AK+ +P+IIFIDE+D++ TAR D + 
Sbjct: 525  ATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNEN 584

Query: 183  GADREVQRILMELLNQMDGFDQTV------------NVKVIMATNRADTLDPALLRPGRL 326
             + R   RI  ELL Q                     V V+ ATN    +D A  R  R 
Sbjct: 585  ESSR---RIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RF 639

Query: 327  DRKIEFPLPDRRQKRLVFQVCTAKM-NLSDEVDLEDYVSRPDKISAADITAICQEAGMHA 503
             RK+  PLPD   +    +   AK  N   ++D E      +  S +D+T++ +EA M  
Sbjct: 640  SRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEP 699

Query: 504  VRKNRYVILPKDFEK 548
            +R     ++  DF+K
Sbjct: 700  IRDLGDKLMFADFDK 714



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>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 50/164 (30%), Positives = 83/164 (50%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           F+   GS F +  +G G   +R +F  AK+N+P ++FIDE+D++   R    +       
Sbjct: 227 FLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNR--TFSPHHPFAN 284

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
           + + +LL +MDGF     + V+ ATN+A+ LD ALLRPGR D +I    P    +  +  
Sbjct: 285 QTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLN 344

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKN 515
           +   K+     +D+E         + ADI  +  +A + A  +N
Sbjct: 345 LYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRN 388



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>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive|
           fusion protein 1) (NEM-sensitive fusion protein 1)
           (dNsf-1) (Protein comatose)
          Length = 745

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188
           V G + + KY+GE    VR +F        RL   +   II  DE+DAI   R  +  G 
Sbjct: 285 VNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQR-GSVAGN 343

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 ++ +LL ++DG DQ  N+ VI  TNR D +D ALLRPGRL+ ++E  LP+ + +
Sbjct: 344 SGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGR 403

Query: 369 RLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
             +  + T +M     ++D+VD ++  +     S A++  + + A   A+ +
Sbjct: 404 VQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNR 455



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>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  + A F  +  +    KY+GEG ++VR +F +A+E  P+IIFIDEVD++   R + + 
Sbjct: 394 AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEH 453

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPD 356
            A R   R+  E L + DG     + +V++  ATNR   LD A+LR  R  +++   LP+
Sbjct: 454 DASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPN 508

Query: 357 RRQKRLVFQVCTAKMNLS-DEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
              + L+ +    K      + +L       D  S +D+TA+ ++A +  +R+
Sbjct: 509 EETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 561



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>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a|
          Length = 437

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 56/168 (33%), Positives = 97/168 (57%), Gaps = 3/168 (1%)
 Frame = +3

Query: 18  AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197
           + F  V  S+ + K+LGE  ++V+++F LA+++ P+IIFIDEVD++  +R + ++ A R 
Sbjct: 187 STFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAAR- 245

Query: 198 VQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             RI  E L QM G  +      V+ ATN    LD A+ R  R +++I  PLP+   +  
Sbjct: 246 --RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQ 301

Query: 375 VFQ--VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +F+  + +   NL+D  ++ +   + +  S ADI+ I +++ M  VRK
Sbjct: 302 MFRLHLGSTPHNLTD-ANIHELARKTEGYSGADISIIVRDSLMQPVRK 348



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>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)|
           (VPS4-1)
          Length = 437

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 56/168 (33%), Positives = 97/168 (57%), Gaps = 3/168 (1%)
 Frame = +3

Query: 18  AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE 197
           + F  V  S+ + K+LGE  ++V+++F LA+++ P+IIFIDEVD++  +R + ++ A R 
Sbjct: 187 STFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAAR- 245

Query: 198 VQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             RI  E L QM G  +      V+ ATN    LD A+ R  R +++I  PLP+   +  
Sbjct: 246 --RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQ 301

Query: 375 VFQ--VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +F+  + +   NL+D  ++ +   + +  S ADI+ I +++ M  VRK
Sbjct: 302 MFRLHLGSTPHNLTD-ANIHELARKTEGYSGADISIIVRDSLMQPVRK 348



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>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  + A F  +  +    KY+GEG ++VR +F +A+E  P+IIFIDEVD++   R + + 
Sbjct: 396 AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEH 455

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPD 356
            A R   R+  E L + DG     + +V++  ATNR   LD A+LR  R  +++   LP+
Sbjct: 456 DASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPN 510

Query: 357 RRQKRLVFQVCTAKMNLS-DEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
              + L+ +    K      + +L       D  S +D+TA+ ++A +  +R+
Sbjct: 511 EETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 563



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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 45/122 (36%), Positives = 67/122 (54%)
 Frame = +3

Query: 183 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 362
           G   E ++ L ++L +MDGF     V VI ATNR D LDPAL RPGR DR++   LPD +
Sbjct: 11  GGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVK 70

Query: 363 QKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDF 542
            +  + +V   K++++ +VD           S AD+  +  EA + A R N+  +   +F
Sbjct: 71  GREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEF 130

Query: 543 EK 548
           EK
Sbjct: 131 EK 132



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>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIA-TARFDAQTGADREVQRI 209
           +  +  + +++G+G R + +++ LA + AP++IFIDE+DAI    R+ +  G   +V  +
Sbjct: 188 IKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRYQSLRG---DVSEV 244

Query: 210 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 389
           +  LL +MDG +Q   V  I ATN  + LD A+    R + +IEF LPD  +++L+ +  
Sbjct: 245 VNALLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPDDEERKLMLEKY 302

Query: 390 TAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMH 500
              M L  +  ++  V    ++S  DI     +  +H
Sbjct: 303 IETMPLKVDFPVDKLVKLTREMSGRDIKDRVLKTALH 339



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>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive|
           fusion protein 2) (NEM-sensitive fusion protein 2)
           (dNsf-2)
          Length = 752

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGA 188
           V G + + KY+GE    +R +F        RL   +   II  DE+DAI  AR  +  G 
Sbjct: 290 VNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKAR-GSVAGN 348

Query: 189 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 368
                 ++ +LL ++DG +Q  N+ VI  TNR D +D ALLRPGRL+ ++E  LP+ + +
Sbjct: 349 SGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGR 408

Query: 369 RLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
             +  + T +M     ++ +VD  +  ++    S A++  + + A   A+ +
Sbjct: 409 VQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNR 460



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>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           FI +  S    K+ GE  ++   VF LA +  P+IIFIDE+D+    R    + +D E  
Sbjct: 158 FINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEAT 213

Query: 204 RIL-MELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
            ++  + ++  DG D   N +VI+  ATNR   LD A+LR  R+  +     P+ RQ++ 
Sbjct: 214 AMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKD 271

Query: 375 VFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509
           + ++     N+   V+L +   + D  S +D+  +C++A +  VR
Sbjct: 272 ILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVR 316



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>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
 Frame = +3

Query: 33  VVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIA-TARFDAQTGADREVQRI 209
           +  +  + +++G+G R + +++ LA + AP++IFIDE+DAI    RF +  G   +V  +
Sbjct: 188 IKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSLRG---DVSEV 244

Query: 210 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 389
           +  LL +MDG +Q   V  I ATN  + LD A+    R + +IEF LP   ++R++ +  
Sbjct: 245 VNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKY 302

Query: 390 TAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMH 500
              M L  +  ++  V     +S  DI     +  +H
Sbjct: 303 IETMPLDVDFSVDKLVKLTKGMSGRDIKERVLKTALH 339



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>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           FI +  S    K+ GE  ++   VF LA +  P IIF+DE+D+    R    +  D E  
Sbjct: 157 FINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNR----SSMDHEAT 212

Query: 204 RIL-MELLNQMDGFDQTVN--VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
            ++  + ++  DG D   N  V V+ ATNR   +D A+LR  R+       LP+  Q+  
Sbjct: 213 AMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREE 270

Query: 375 VFQVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVR 509
           + ++  +  NLS+ ++L++  S+ +  S +D+  +C++A M+ VR
Sbjct: 271 ILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVR 315



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>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           A  + A FI +  S  + K+ GE  ++V  +F LA +  P IIFIDE+D+    R    +
Sbjct: 147 AKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRER----S 202

Query: 183 GADREVQRIL-MELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
             D EV   L  E +   DG      V +I ATNR + +D A LR  RL ++    LP  
Sbjct: 203 STDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGS 260

Query: 360 RQKRLVFQVCTAKMNL-SDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
            Q+  +  V      L  DE DL+         S +D+  +C+EA + A ++
Sbjct: 261 DQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKE 312



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>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 48/163 (29%), Positives = 81/163 (49%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           FI +  S    K+ GE  ++   VF LA +  P+IIFIDE+D+    R  +   A   ++
Sbjct: 154 FINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK 213

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
              M L + +D  D +  V V+ ATNR   LD A++R  R+  +     P  +Q+  + +
Sbjct: 214 AQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILK 270

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +     N+   VDL +     D  S +D+  +C++A +  VR+
Sbjct: 271 LILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313



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>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 48/163 (29%), Positives = 81/163 (49%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           FI +  S    K+ GE  ++   VF LA +  P+IIFIDE+D+    R  +   A   ++
Sbjct: 154 FINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK 213

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
              M L + +D  D +  V V+ ATNR   LD A++R  R+  +     P  +Q+  + +
Sbjct: 214 AQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILK 270

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +     N+   VDL +     D  S +D+  +C++A +  VR+
Sbjct: 271 LILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313



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>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 48/163 (29%), Positives = 81/163 (49%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           FI +  S    K+ GE  ++   VF LA +  P+IIFIDE+D+    R  +   A   ++
Sbjct: 154 FINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMK 213

Query: 204 RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ 383
              M L + +D  D +  V V+ ATNR   LD A++R  R+  +     P  +Q+  + +
Sbjct: 214 AQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILK 270

Query: 384 VCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRK 512
           +     N+   VDL +     D  S +D+  +C++A +  VR+
Sbjct: 271 LILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313



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>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)|
          Length = 890

 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 18/146 (12%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
           ++     ++ V GS+F  +  G     V D+F+  +  +P I++IDE+D+IA  R +A  
Sbjct: 399 SYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANK 458

Query: 183 -------------GADREVQR-----ILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 308
                        G++  + +     +LM+ L  MDG+ +  ++ +I ATNR +TLD A+
Sbjct: 459 QLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAI 518

Query: 309 LRPGRLDRKIEFPLPDRRQKRLVFQV 386
           +RPGR DR+I F  P   +++ + ++
Sbjct: 519 MRPGRFDRQIVFSPPFFEERKDILRI 544



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>MSP1_CAEEL (P54815) Protein MSP1 homolog|
          Length = 342

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
 Frame = +3

Query: 24  FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ 203
           FI +  S    K+ GE  ++   VF +A++  P IIFIDE+D+      D Q+       
Sbjct: 145 FINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLR---DRQSHDHESTA 201

Query: 204 RILMELLNQMDGFDQTVNVKVIM-ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 380
            +  + +   DGF  + +  ++M ATNR   +D A+LR  R+  + + P+P+ +Q+  + 
Sbjct: 202 MMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVPNAKQRSQIL 259

Query: 381 QVCTAKMNLSDEVDLEDYVSRPDKISAADITAICQEA 491
            V      +++ V+L +     + +S +D+  +C+ A
Sbjct: 260 NVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVCRLA 296



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>SAP1_YEAST (P39955) Protein SAP1|
          Length = 897

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
 Frame = +3

Query: 3    AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 182
            A  + + F  +  S    KYLGE  ++VR +F +AK+ +P+IIF+DE+D+I  +R     
Sbjct: 659  ATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSR--NNE 716

Query: 183  GADREVQRILMELLNQ--------------------MDGFDQTVNVKVIMATNRADTLDP 302
              +   +RI  E L Q                     +G +    V V+ ATN   ++D 
Sbjct: 717  NENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDE 776

Query: 303  ALLRPGRLDRKIEFPLPDRRQKRLVF-QVCTAKMNLSDEVDLEDYVSRPDKISAADITAI 479
            A  R  R  R+   PLP+ + + + F ++ + + +   E D ++ V   +  S +DIT++
Sbjct: 777  AARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSL 834

Query: 480  CQEAGMHAVR 509
             ++A M  +R
Sbjct: 835  AKDAAMGPLR 844



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>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
 Frame = +3

Query: 63  LGEGPRMVRDVFRLAKENAPAIIFIDEVD-AIATARFDAQTGADREVQRILMELLNQMDG 239
           +GE    VR + + A+  +P I++IDE+D A   + F+  +G  + V    +  L++   
Sbjct: 316 IGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKRVFGTFITWLSEKKS 375

Query: 240 FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLS--D 413
                 V V+   N  D+L P LLR GR D      LPD +++  +F+V   K+      
Sbjct: 376 -----PVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWS 430

Query: 414 EVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518
             D E   ++ ++ S A+I     EA   A  +NR
Sbjct: 431 TYDTEILSAQSNRFSGAEIEESIYEAMHIAFNENR 465



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>FTSH_CHLVU (P56369) Cell division protein ftsH homolog|
          Length = 1720

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 30/100 (30%), Positives = 53/100 (53%)
 Frame = +3

Query: 207  ILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 386
            +L +LL ++DG      V +  ATNR + LDPALLRPGR D+ ++  LP ++++  + Q 
Sbjct: 1154 LLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQF 1213

Query: 387  CTAKMNLSDEVDLEDYVSRPDKISAADITAICQEAGMHAV 506
                +     +    +  R    +AAD+  +  E+ + A+
Sbjct: 1214 YGQTLGYQKTMPWAYFGERTVGFTAADLATLMNESALKAI 1253



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>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL|
          Length = 330

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 1/182 (0%)
 Frame = +3

Query: 30  RVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRI 209
           RV     +  YLGE    +R  F  A++  P ++F DE DA+A  R D  +G   E++R+
Sbjct: 148 RVKLDRLISSYLGETATNIRKTFEFARKQ-PCVLFFDEFDALARTRDD--SGEHNELRRV 204

Query: 210 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 389
           +  LL  +D         +I ATN   +LD A+ R  R D  + F   DR +  ++ +  
Sbjct: 205 VNSLLLFIDNMQP--KGFLIAATNLDRSLDAAIWR--RFDEVLWF---DRPEAAMIGRFL 257

Query: 390 TAKM-NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPKDFEKGYRTNV 566
             K  N+    D     +  +  S A+I  +C +A    + + R  +  +DF +  +   
Sbjct: 258 KLKFKNVPVAFDPARNSAALEGYSFAEIERVCTQAIKAMIIERRKQVQERDFNRALQDEA 317

Query: 567 KK 572
           ++
Sbjct: 318 RR 319



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>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)|
          Length = 491

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVD-AIATARFDAQ 179
           A+  T   +R+   +     +GE    +R++  +A+  +P +++IDE+D A +       
Sbjct: 280 ANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGD 339

Query: 180 TGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 359
           +G    V    +  L++     +T  V V+   N    L   +LR GR D      LP+ 
Sbjct: 340 SGTSARVFGTFITWLSE-----KTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNN 394

Query: 360 RQKRLVFQVCTAKM 401
            ++ L+FQ+  A++
Sbjct: 395 EERELIFQIHLARI 408



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>YCF2_MARPO (P09975) Protein ycf2|
          Length = 2136

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
 Frame = +3

Query: 69   EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 248
            E  R +      AK+ +P II+I  +  +   R      +D      ++    Q D F +
Sbjct: 1451 ESLRRLNLTLDFAKKMSPCIIWIQNIHQLNVNRLTQNVESDPTFLLGILLKYFQTD-FSK 1509

Query: 249  TV--NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 422
            T   N+ VI +T+    +DPAL+ P RLD+ I   L +  Q++  F +   K N   + +
Sbjct: 1510 TKKNNIIVIGSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLKEN 1569

Query: 423  ---LEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
               L ++ SR    +  D++A+  E  + ++ KNR  I
Sbjct: 1570 LFFLNEFGSRTMGYNLRDLSALTNEVLLISITKNRSFI 1607



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>YCF2_ADICA (Q85B60) Protein ycf2|
          Length = 2104

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
 Frame = +3

Query: 21   AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE- 197
            +F   V   F+ K   E    +  VF +AKE +P  ++I ++  +   R   +  AD + 
Sbjct: 1430 SFFNNVRGNFISK---ESVHRLNIVFEIAKEMSPCTLWIQDIHELNICRSYNKLEADPKF 1486

Query: 198  -VQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 374
             + +IL  + +++   D   NV VI  T+    +DPAL+ P RL++ I F   + RQ++ 
Sbjct: 1487 LLCQILKSIGHKLGNSDIRENV-VIATTHVPARIDPALVAPNRLNQLINFRRSNGRQRQK 1545

Query: 375  VFQVCTAKMNL---SDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNR 518
               +          ++   LE  VS     S  D+  +  EA +    K R
Sbjct: 1546 ELSILLRIKGFEVGANPTLLESTVSGTAGYSKRDLLLLANEALLIGTSKGR 1596



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>YCF2_PINTH (P41653) Protein ycf2|
          Length = 2054

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
 Frame = +3

Query: 102  LAKENAPAIIFIDEVDAI----ATARFDAQTGADREVQRILMELLNQMDGF-DQTVNVKV 266
            LAK  +P II+I  +  +    AT         D  +  ++  L    DG  D   N+ V
Sbjct: 1440 LAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLFRFRDGEKDSMRNILV 1499

Query: 267  IMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRP 446
            I +T+    +DPAL+ P RLDR I   +    Q++  F +      L      +++ S  
Sbjct: 1500 IASTHIPQRVDPALIAPNRLDRSINIRMLVIPQRQREFPILLCSKGLYSVKFPDEFGSIT 1559

Query: 447  DKISAADITAICQEAGMHAVRKNRYVI 527
               +  D+ A+  EA + ++ +N+ VI
Sbjct: 1560 IDYAVRDLAALADEALILSITRNKSVI 1586



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>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 419

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +3

Query: 123 AIIFIDEVDAIATARF--DAQTGADREVQRILME-LLNQMDGFDQTVNVKVIMATNRADT 293
           +II +++VDA   +R        A + + R+    LLN +DG   T    V M TN  D 
Sbjct: 277 SIILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLNALDGVASTEARIVFMTTNHIDR 336

Query: 294 LDPALLRPGRLDRK 335
           LDPAL+RPGR+D K
Sbjct: 337 LDPALIRPGRVDVK 350



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>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)|
          Length = 419

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 22/39 (56%), Positives = 25/39 (64%)
 Frame = +3

Query: 219 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRK 335
           LLN +DG   T    V M TN  D LDPAL+RPGR+D K
Sbjct: 312 LLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLK 350



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>YCF2_PINKO (Q85WV5) Protein ycf2|
          Length = 1320

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
 Frame = +3

Query: 96   FRLAKENAPAIIFID---EVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKV 266
            F LAK  +P II+I    E++   T       G       +L+  +++    D   N+  
Sbjct: 692  FELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYISRGGEKDSIRNILF 751

Query: 267  IMATNRADTLDPALLRPGRLDRKIEFPL--PDRRQKRLVFQVCTAKMNLSDEVDLED-YV 437
            I +T+    +DPAL+ P RLD  I   +    +RQ+     +C+  +    EV   D + 
Sbjct: 752  IASTHIPQRVDPALIAPNRLDSSINIRMLVIPQRQREFPILLCSKGLYSEKEVSCPDEFG 811

Query: 438  SRPDKISAADITAICQEAGMHAVRKNRYVI 527
            S      A D+ A+  EA + ++ + + VI
Sbjct: 812  SITIDSDARDLAALANEALITSITRKKSVI 841



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>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1|
          Length = 456

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +3

Query: 123 AIIFIDEVDAIATARFDAQTGADREVQRILME-LLNQMDGFDQTVNVKVIMATNRADTLD 299
           +I+ ++++DA    R  +QTG       +    LLN +DG   +      M TN  + LD
Sbjct: 314 SILLLEDIDAAFNKR--SQTGEQGFHSSVTFSGLLNALDGVTSSEETITFMTTNHPEKLD 371

Query: 300 PALLRPGRLDRKI 338
            A++RPGR+D K+
Sbjct: 372 AAIMRPGRIDYKV 384



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>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 418

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 22/39 (56%), Positives = 25/39 (64%)
 Frame = +3

Query: 219 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRK 335
           LLN +DG   T    V M TN  D LDPAL+RPGR+D K
Sbjct: 312 LLNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVDLK 350



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>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 28/108 (25%), Positives = 56/108 (51%)
 Frame = +3

Query: 63  LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF 242
           +GE    +R +  +A+  +P I++IDE+D  A +  D++ G      R+L   ++ +   
Sbjct: 300 VGESESRLRQMIDVAETLSPCILWIDEMDK-AFSNNDSR-GDSGTSNRVLATFISWLS-- 355

Query: 243 DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV 386
           ++T  V V+   N  D L   ++R GR D      LP+  +++ +F++
Sbjct: 356 EKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKI 403



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>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 449

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +3

Query: 123 AIIFIDEVDAIATARF-DAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLD 299
           A++ +++VD+    R    + G    V      LLN +DG   +    + M TN  + LD
Sbjct: 296 AVVLLEDVDSAFQGRERSGEVGFHANVT--FSGLLNALDGVTSSDERIIFMTTNHPEKLD 353

Query: 300 PALLRPGRLDRK 335
           PAL+RPGR+D K
Sbjct: 354 PALVRPGRVDVK 365



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>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 420

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
 Frame = +3

Query: 123 AIIFIDEVDAIATARFDAQTGADREVQRI----LMELLNQMDGFDQTVNVKVIMATNRAD 290
           +II +++VDA   +R    T      Q +       LLN +DG   +    V M TN  +
Sbjct: 277 SIILLEDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDGVASSEARIVFMTTNFIE 336

Query: 291 TLDPALLRPGRLDRK 335
            LDPAL+RPGR+D K
Sbjct: 337 RLDPALVRPGRVDLK 351



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>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)|
          Length = 69

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = +3

Query: 258 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 422
           V V+  TNR D LDPAL+RPGR  R+I    P  + +  +F+V    + L   ++
Sbjct: 1   VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLN 55



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>YCF2_PHYPA (P61243) Protein ycf2|
          Length = 2259

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
 Frame = +3

Query: 63   LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE-VQRILMELLNQMDG 239
            L E  R +  +  LA++ +P II++  +  +   R      +D   +  I ++       
Sbjct: 1601 LMESLRRLNLILELAEKLSPCIIWMPNIHELNVNRSTQNVESDPTFLLGIFLKYFQTGFS 1660

Query: 240  FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIE---FPLPDRRQK---RLVFQVCTAKM 401
               T N+ +I +T+    +DPAL+ P RLDR I    F +  R++K    L  +      
Sbjct: 1661 KKNTNNIIIIGSTHLPKKVDPALISPNRLDRLINIRTFNILQRQKKISILLYSKYSKYFY 1720

Query: 402  NLSDEVDLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVILPK 536
            +   +  L ++ SR    +A D+  +  E  + ++ +N+  I  K
Sbjct: 1721 SKKKKSSLNEFGSRTIGYNARDLAGLINEILLISINQNQSTIQKK 1765



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>YCF2_ANTFO (Q859W7) Protein ycf2|
          Length = 2392

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
 Frame = +3

Query: 93   VFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE-VQRILMELLNQMDGFDQTVNVKVI 269
            +  LAK+ +P II+I ++  +   R      +D   +  IL++  +       T  + +I
Sbjct: 1713 ILELAKKMSPCIIWIQDIHELNVNRSTENVESDPTFLLGILLKYFHTEFISKSTKGIIII 1772

Query: 270  MATNRADTLDPALLRPGRLDRKIEFPLPD--RRQKRLVFQVCTAKMNLSDE-VDLEDYVS 440
             +T+    +DPAL+ P RLD+ +   + D   RQ++    + + +    ++ +   ++  
Sbjct: 1773 GSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHFNEFAY 1832

Query: 441  RPDKISAADITAICQEAGM 497
            R    +  D+ A+  E  +
Sbjct: 1833 RTMGYNGRDLVALANEVSL 1851



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>TRP13_RAT (Q5XHZ9) Thyroid receptor-interacting protein 13 (Thyroid hormone|
           receptor interactor 13) (Trip-13)
          Length = 432

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
 Frame = +3

Query: 27  IRVVGSEFVQKYLGEGPRMVRDVFRLAKE-----NAPAIIFIDEVDAIATARFDAQTGAD 191
           I +       K+  E  ++V  +F+  ++      A   + IDEV+++  AR   + GA+
Sbjct: 210 IEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVESLTAARNACRAGAE 269

Query: 192 -REVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALL 311
             +  R++  +L Q+D   +  NV ++  +N  + +D A +
Sbjct: 270 PSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFV 310



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>TRP13_MOUSE (Q3UA06) Thyroid receptor-interacting protein 13 (Thyroid hormone|
           receptor interactor 13) (Trip-13)
          Length = 432

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
 Frame = +3

Query: 27  IRVVGSEFVQKYLGEGPRMVRDVFRLAKE-----NAPAIIFIDEVDAIATARFDAQTGAD 191
           I +       K+  E  ++V  +F+  ++      A   + IDEV+++  AR   + GA+
Sbjct: 210 IEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVESLTAARNACRAGAE 269

Query: 192 -REVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALL 311
             +  R++  +L Q+D   +  NV ++  +N  + +D A +
Sbjct: 270 PSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFV 310



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>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2|
          Length = 424

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
 Frame = +3

Query: 9   HTTAAFIRVVGSEFVQKYLGEGPRMVRDVF----RLAK-ENAPAIIFIDEVDAIATARFD 173
           ++ +  + +       K+  E  ++V+ +F     LA+ E     + IDEV+++   R  
Sbjct: 204 YSKSVMLEINSHSLFSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLIDEVESLGMCRES 263

Query: 174 AQTGAD-REVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALL 311
           + + ++  +  R +  LL Q+D   +  NV ++  +N   TLD AL+
Sbjct: 264 SSSRSEPSDAIRAVNALLTQIDRIRRRDNVLILCTSNLESTLDKALV 310



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>PCH2_YEAST (P38126) Pachytene checkpoint protein 2|
          Length = 536

 Score = 36.2 bits (82), Expect = 0.075
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
 Frame = +3

Query: 57  KYLGEGPRMVRDVFR----LAKENAPAIIFI----DEVDAIATARFD-AQTGADREVQRI 209
           K+ GE  + +  VF+    L K N    IFI    DEV+AIA++R + +      +  R+
Sbjct: 363 KWFGESSKNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSSRNESTDGIRV 422

Query: 210 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALL 311
           +  LL Q+D   +  N   +  +N  D+LD A +
Sbjct: 423 VNTLLTQLDRLKKYHNFLALATSNLLDSLDDAFV 456



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>YCF2_PSINU (Q8WHW9) Protein ycf2|
          Length = 2313

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
 Frame = +3

Query: 42   SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQ--RILM 215
            S+ V  + GE  R +   F L K  +P I++I ++  +   R   +   D +     +L 
Sbjct: 1644 SKSVVLFPGESVRRLTLTFELVKRMSPCIVWIQDIHELNLDRVMNELEVDPKYLFCSLLK 1703

Query: 216  ELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKI 338
             L N    +    N+ +I  T+    +DP+ + P RLD+ I
Sbjct: 1704 CLSNNSSNYYVRNNI-IIAPTHIPSKVDPSFISPNRLDQLI 1743



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>NADA_RHOBA (Q7UNR5) Quinolinate synthetase A|
          Length = 392

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
 Frame = +3

Query: 285 ADTLDPALLRPGRLD----RKIEFPLPDRR------QKRLVFQVCTAKMNLSDEVDLEDY 434
           A+T D    RP R++    R+++  LPD            + QV  A  ++S+ +D E  
Sbjct: 99  AETADILANRPDRIEARDGRRVDVLLPDMAAGCSMADMAAIAQVEAAWADMSEVIDTEQV 158

Query: 435 VSRPDKISAADITAIC-QEAGMHAVRKNRYVILPKDFEKGYR 557
           +      SAA + A C +  G+     N   +L   FE+G R
Sbjct: 159 IPVTYINSAASLKAFCGRHGGIVCTSSNARAVLEWAFERGQR 200



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>YCF2_EPIVI (P30072) Protein ycf2|
          Length = 2216

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = +3

Query: 219  LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDR--KIEFPLPDRRQKRLVFQVCT 392
            L+N +     T N+ VI +T+    +DPALL P +L+   KI   L  +++K       T
Sbjct: 1690 LVNHLSERCSTNNIIVIASTHIPKKVDPALLAPNKLNTCIKIRRLLIPQQRKHFCTLSYT 1749

Query: 393  AKMNLSDEV-DLEDYVSRPDKISAADITAICQEAGMHAVRKNRYVI 527
               +L +++     + S     SA D+ A+  EA   ++ +N+ ++
Sbjct: 1750 RGFHLENKIFHTNGFGSITMGSSARDLVALTNEALSISITQNKSIL 1795



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>HSLU_BARHE (Q6G5G0) ATP-dependent hsl protease ATP-binding subunit hslU|
          Length = 436

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +3

Query: 78  RMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADRE-VQRILMELL 224
           +++++  R+A+ +   I+FIDE+D IAT    A     RE VQR L+ L+
Sbjct: 231 QIIQEALRVAENDG--IVFIDEIDKIATRDGGASAAVSREGVQRDLLPLV 278


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,609,008
Number of Sequences: 219361
Number of extensions: 1778147
Number of successful extensions: 6430
Number of sequences better than 10.0: 275
Number of HSP's better than 10.0 without gapping: 5904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6253
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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