Clone Name | basdf08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_465282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1517 Score = 823 bits (415), Expect = 0.0 Identities = 556/603 (92%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 708 ggcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagta 767 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 768 cctgggtgagggacctaggatggttcgagatgtattccgtttggctaaagagaatgcccc 827 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 ||||| |||||||| |||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 828 agctatcatattcatcgatgaggttgatgctatagcaactgctcgttttgatgctcagac 887 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 888 tggtgctgaccgagaagttcagcgtattcttatggaactactcaatcagatggatggatt 947 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||| |||||||||||||||||||||||||| ||||| |||| ||||| ||||| || Sbjct: 948 tgatcaaacagtgaatgtgaaggttataatggcgaccaacagggcggataccctagaccc 1007 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggag 361 ||||||| | |||||||| ||| ||||||||||||| ||||||||||| || ||||| | Sbjct: 1008 tgctctgttacgtccaggtagattggacaggaaaatcgagttccctcttccagatcgtcg 1067 Query: 362 gcagaagaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttga 421 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1068 gcagaagaggcttgttttccaagtctgtactgctaaaatgaacttgagtgatgaggttga 1127 Query: 422 tttggaagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttg 481 ||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||| || Sbjct: 1128 tttggaagattatgtttccagaccagataaaattagtgctgctgatattgctgctatctg 1187 Query: 482 ccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggactt 541 || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1188 tcaagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctccccaaggactt 1247 Query: 542 cgagaagggttaccgaaccaatgtcaagaagcctgagtcagactttgacttctacaaatg 601 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1248 cgagaagggttaccgaaccaatgtcaagaagcctgagactgactttgacttctacaaatg 1307 Query: 602 agg 604 ||| Sbjct: 1308 agg 1310
>dbj|AK071476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091H23, full insert sequence Length = 1518 Score = 823 bits (415), Expect = 0.0 Identities = 556/603 (92%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 708 ggcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagta 767 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 768 cctgggtgagggacctaggatggttcgagatgtattccgtttggctaaagagaatgcccc 827 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 ||||| |||||||| |||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 828 agctatcatattcatcgatgaggttgatgctatagcaactgctcgttttgatgctcagac 887 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 888 tggtgctgaccgagaagttcagcgtattcttatggaactactcaatcagatggatggatt 947 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||| |||||||||||||||||||||||||| ||||| |||| ||||| ||||| || Sbjct: 948 tgatcaaacagtgaatgtgaaggttataatggcgaccaacagggcggataccctagaccc 1007 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggag 361 ||||||| | |||||||| ||| ||||||||||||| ||||||||||| || ||||| | Sbjct: 1008 tgctctgttacgtccaggtagattggacaggaaaatcgagttccctcttccagatcgtcg 1067 Query: 362 gcagaagaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttga 421 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1068 gcagaagaggcttgttttccaagtctgtactgctaaaatgaacttgagtgatgaggttga 1127 Query: 422 tttggaagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttg 481 ||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||| || Sbjct: 1128 tttggaagattatgtttccagaccagataaaattagtgctgctgatattgctgctatctg 1187 Query: 482 ccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggactt 541 || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1188 tcaagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctccccaaggactt 1247 Query: 542 cgagaagggttaccgaaccaatgtcaagaagcctgagtcagactttgacttctacaaatg 601 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1248 cgagaagggttaccgaaccaatgtcaagaagcctgagactgactttgacttctacaaatg 1307 Query: 602 agg 604 ||| Sbjct: 1308 agg 1310
>dbj|AB070253.1| Oryza sativa (japonica cultivar-group) OsRPT3 mRNA for 26S proteasome regulatory particle triple-A ATPase subunit3, partial cds Length = 1375 Score = 823 bits (415), Expect = 0.0 Identities = 556/603 (92%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 507 ggcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagta 566 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 567 cctgggtgagggacctaggatggttcgagatgtattccgtttggctaaagagaatgcccc 626 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 ||||| |||||||| |||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 627 agctatcatattcatcgatgaggttgatgctatagcaactgctcgttttgatgctcagac 686 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 687 tggtgctgaccgagaagttcagcgtattcttatggaactactcaatcagatggatggatt 746 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||| |||||||||||||||||||||||||| ||||| |||| ||||| ||||| || Sbjct: 747 tgatcaaacagtgaatgtgaaggttataatggcgaccaacagggcggataccctagaccc 806 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggag 361 ||||||| | |||||||| ||| ||||||||||||| ||||||||||| || ||||| | Sbjct: 807 tgctctgttacgtccaggtagattggacaggaaaatcgagttccctcttccagatcgtcg 866 Query: 362 gcagaagaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttga 421 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 867 gcagaagaggcttgttttccaagtctgtactgctaaaatgaacttgagtgatgaggttga 926 Query: 422 tttggaagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttg 481 ||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||| || Sbjct: 927 tttggaagattatgtttccagaccagataaaattagtgctgctgatattgctgctatctg 986 Query: 482 ccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggactt 541 || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 987 tcaagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctccccaaggactt 1046 Query: 542 cgagaagggttaccgaaccaatgtcaagaagcctgagtcagactttgacttctacaaatg 601 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1047 cgagaagggttaccgaaccaatgtcaagaagcctgagactgactttgacttctacaaatg 1106 Query: 602 agg 604 ||| Sbjct: 1107 agg 1109
>dbj|AK059237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F02, full insert sequence Length = 1293 Score = 815 bits (411), Expect = 0.0 Identities = 555/603 (92%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 459 ggcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagta 518 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 519 cctgggtgagggacctaggatggttcgagatgtattccgtttggctaaagagaatgcccc 578 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 ||||| |||||||| |||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 579 agctatcatattcatcgatgaggttgatgctatagcaactgctcgttttgatgctcagac 638 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 639 tggtgctgaccgaggagttcagcgtattcttatggaactactcaatcagatggatggatt 698 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||| |||||||||||||||||||||||||| ||||| |||| ||||| ||||| || Sbjct: 699 tgatcaaacagtgaatgtgaaggttataatggcgaccaacagggcggataccctagaccc 758 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggag 361 ||||||| | |||||||| ||| ||||||||||||| ||||||||||| || ||||| | Sbjct: 759 tgctctgttacgtccaggtagattggacaggaaaatcgagttccctcttccagatcgtcg 818 Query: 362 gcagaagaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttga 421 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 819 gcagaagaggcttgttttccaagtctgtactgctaaaatgaacttgagtgatgaggttga 878 Query: 422 tttggaagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttg 481 ||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||| || Sbjct: 879 tttggaagattatgtttccagaccagataaaattagtgctgctgatattgctgctatctg 938 Query: 482 ccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggactt 541 || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 939 tcaagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctccccaaggactt 998 Query: 542 cgagaagggttaccgaaccaatgtcaagaagcctgagtcagactttgacttctacaaatg 601 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 999 cgagaagggttaccgaaccaatgtcaagaagcctgagactgactttgacttctacaaatg 1058 Query: 602 agg 604 ||| Sbjct: 1059 agg 1061
>gb|AY104317.1| Zea mays PCO132144 mRNA sequence Length = 1654 Score = 638 bits (322), Expect = e-180 Identities = 533/602 (88%), Gaps = 1/602 (0%) Strand = Plus / Plus Query: 3 gcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtac 62 |||||||| || ||||||||||||||||| || || |||||||||||||| || |||||| Sbjct: 773 gcacatcataccactgctgcttttatcagggtcgtcggttcagagtttgttcaaaagtac 832 Query: 63 ctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccg 122 ||||||||||||| || ||||| || || || ||||| || || || ||||||||||| Sbjct: 833 ttgggtgagggccctagaatggtgcgtgacgtgttccgtttggccaaggagaatgcccca 892 Query: 123 gctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagacc 182 || || || ||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 893 gcaatcattttcattgatgaggttgatgctatagccactgctcgttttgatgctcagact 952 Query: 183 ggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggattt 242 || |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 953 ggtgctgaccgagaagttcagcgtattcttatggagctactcaatcagatggatgggttt 1012 Query: 243 gatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcct 302 ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1013 gatcaaacagtcaatgtgaaggttataatggcaactaatcgggcagacactctagatcct 1072 Query: 303 gctctgctgcgtccaggaagactggacaggaaaattgagttccctct-gccggatcggag 361 ||| || ||||||| || ||||| ||||||||||||||||||||||| ||| || ||| | Sbjct: 1073 gctttgttgcgtcctggtagacttgacaggaaaattgagttccctctggccagaccggcg 1132 Query: 362 gcagaagaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttga 421 ||||||||||||||||| |||||||| ||||| || |||||| |||| ||||||||||| Sbjct: 1133 tcagaagaggcttgtttttcaagtttgcactgccaaaatgaacctgagcgatgaggttga 1192 Query: 422 tttggaagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttg 481 ||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||| || Sbjct: 1193 tttggaagattatgtttccagaccggataagatcagtgctgctgatattgctgctatctg 1252 Query: 482 ccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggactt 541 ||| || |||||||||||||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 1253 ccaagaggctggcatgcatgctgtccgcaaaaaccgatatgtcatcctccccaaggactt 1312 Query: 542 cgagaagggttaccgaaccaatgtcaagaagcctgagtcagactttgacttctacaaatg 601 || ||||| ||||||||||| || |||||||| ||| |||||||||| ||||||||||| Sbjct: 1313 tgaaaagggctaccgaaccaacgtgaagaagcccgagacagactttgatttctacaaatg 1372 Query: 602 ag 603 || Sbjct: 1373 ag 1374
>gb|AY530962.1| Zea mays 26S proteasome regulatory complex ATPase RPT3 mRNA, complete cds Length = 1251 Score = 636 bits (321), Expect = e-179 Identities = 531/601 (88%) Strand = Plus / Plus Query: 3 gcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtac 62 |||||||| || ||||||||||||||||| || || ||||||||| ||| || |||||| Sbjct: 463 gcacatcataccactgctgcttttatcagggtcgtcggttcagagggtgttcaaaagtac 522 Query: 63 ctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccg 122 ||||||||||||| || ||||| || || || ||||| || || || ||||||||||| Sbjct: 523 ttgggtgagggccctagaatggtgcgtgacgtgttccgtttggccaaggagaatgcccca 582 Query: 123 gctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagacc 182 || || || ||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 583 gcaatcattttcattgatgaggttgatgctatagccactgctcgttttgatgctcagact 642 Query: 183 ggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggattt 242 || |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 643 ggtgctgaccgagaagttcagcgtattcttatggagctactcaatcagatggatgggttt 702 Query: 243 gatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcct 302 ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 703 gatcaaacagtcaatgtgaaggttataatggcaactaatcgggcagacactctagatcct 762 Query: 303 gctctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggagg 362 ||| || ||||||| || ||||| |||||||||||||||||||||||||| || ||| | Sbjct: 763 gctttgttgcgtcctggtagacttgacaggaaaattgagttccctctgccagaccggcgt 822 Query: 363 cagaagaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgat 422 ||||||||||||||||| |||||||| ||||| || |||||| |||| |||||||||||| Sbjct: 823 cagaagaggcttgtttttcaagtttgcactgccaaaatgaacctgagcgatgaggttgat 882 Query: 423 ttggaagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttgc 482 |||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||| ||| Sbjct: 883 ttggaagattatgtttccagaccggataagatcagtgctgctgatattgctgctatctgc 942 Query: 483 caggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttc 542 || || |||||||||||||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 943 caagaggctggcatgcatgctgtccgcaaaaaccgatatgtcatcctccccaaggacttt 1002 Query: 543 gagaagggttaccgaaccaatgtcaagaagcctgagtcagactttgacttctacaaatga 602 || ||||| ||||||||||| || |||||||| ||| |||||||||| |||||||||||| Sbjct: 1003 gaaaagggctaccgaaccaacgtgaagaagcccgagacagactttgatttctacaaatga 1062 Query: 603 g 603 | Sbjct: 1063 g 1063
>gb|BT016898.1| Zea mays clone Contig731 mRNA sequence Length = 1066 Score = 444 bits (224), Expect = e-121 Identities = 350/392 (89%) Strand = Plus / Plus Query: 213 atggaactactgaatcagatggatggatttgatcagacagtgaatgtgaaggttataatg 272 ||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 2 atggagctactcaatcagatggatgggtttgatcaaacagtgaatgtgaaggttataatg 61 Query: 273 gcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaagactggacagg 332 ||||| ||||||||||| |||||||||||||||||| ||||||| || ||||| |||||| Sbjct: 62 gcaactaatcgggcagacactctagatcctgctctgttgcgtcctggtagacttgacagg 121 Query: 333 aaaattgagttccctctgccggatcggaggcagaagaggcttgttttccaagtttgtact 392 ||||||||||||||| |||| || ||| | ||||||||||||||||||||||| || ||| Sbjct: 122 aaaattgagttccctttgccagaccggcgtcagaagaggcttgttttccaagtctgcact 181 Query: 393 gctaagatgaacttgagtgatgaggttgatttggaagattatgtctccagacctgataaa 452 || || |||||| ||||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 182 gccaaaatgaacctgagtgacgaggttgatttggaagactatgtttccagaccggataag 241 Query: 453 atcagtgctgctgatatcactgctatttgccaggaagctggcatgcatgctgtccgcaaa 512 ||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||| Sbjct: 242 atcagtgctgctgatattgctgctatctgtcaagaagctggcatgcatgctgtccgcaaa 301 Query: 513 aatcggtatgttatcctccccaaggacttcgagaagggttaccgaaccaatgtcaagaag 572 || || ||||| ||||||||||||||||| |||||||| ||||||||||| || || ||| Sbjct: 302 aaccgatatgtcatcctccccaaggactttgagaagggctaccgaaccaacgtgaaaaag 361 Query: 573 cctgagtcagactttgacttctacaaatgagg 604 |||||| | ||||| || |||||||||||||| Sbjct: 362 cctgagacggacttcgatttctacaaatgagg 393
>emb|AJ006095.1|CAR6095 Cicer arietinum mRNA for putative 26S protease regulatory subunit 6, partial Length = 763 Score = 323 bits (163), Expect = 4e-85 Identities = 439/531 (82%) Strand = Plus / Plus Query: 68 tgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggctat 127 |||||| ||| | ||||| || |||||||| || | ||||||||||||||||| || || Sbjct: 1 tgagggtccacgaatggtccgtgatgtatttcgtcttgctaaagagaatgcccctgcaat 60 Query: 128 aatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggggc 187 ||||| ||||||||||||||||| ||||| |||||| | || ||||| || || || || Sbjct: 61 tatatttattgatgaggttgatgcgatagctactgctaggtttgatgcccaaactggagc 120 Query: 188 tgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgatca 247 |||| ||||||| || ||||| || |||||||| |||||||||||||||| || ||||| Sbjct: 121 tgacagagaagtacaacgtatcctcatggaacttttgaatcagatggatggtttcgatca 180 Query: 248 gacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgctct 307 |||||||||||| ||||| ||||||||||||||||||||||| ||| | |||||||| || Sbjct: 181 gacagtgaatgttaaggtcataatggcaaccaatcgggcagacactttggatcctgccct 240 Query: 308 gctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcagaa 367 ||||||| ||||| || || | ||||||||||||||| |||| ||| | |||| || Sbjct: 241 cttgcgtcctggaaggcttgatcgcaaaattgagttccctttgcctgatagacggcaaaa 300 Query: 368 gaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttgga 427 ||||||||| || || ||||| || || || |||||||||||||||||||| || |||| Sbjct: 301 gaggcttgtatttcaggtttgcacagccaaaatgaacttgagtgatgaggtggacctgga 360 Query: 428 agattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttgccagga 487 |||||||| ||| | ||||| ||||| ||||||||||| || |||||||||| || || Sbjct: 361 ggattatgtttcccgtcctgacaaaattagtgctgctgagatatctgctatttgtcaaga 420 Query: 488 agctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcgagaa 547 ||| || ||||||||||| || || ||| | ||||| || || || |||||||||||||| Sbjct: 421 agcaggaatgcatgctgttcgtaagaatagatatgtcatactgccgaaggacttcgagaa 480 Query: 548 gggttaccgaaccaatgtcaagaagcctgagtcagactttgacttctacaa 598 ||||||| | || ||||| ||||||||||| | |||||||| || ||||| Sbjct: 481 gggttacaggacaaatgtgaagaagcctgatacggactttgaattttacaa 531
>gb|BT012705.1| Lycopersicon esculentum clone 113583F, mRNA sequence Length = 1608 Score = 280 bits (141), Expect = 5e-72 Identities = 462/569 (81%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| || || |||||||| ||||| || || ||||||||| || Sbjct: 701 catcacactacggccgctttcataagggtggttggctcagaattcgttcagaagtacttg 760 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 |||||||| || | |||||||| ||||| ||||| | || ||||| ||||| || || Sbjct: 761 ggtgagggtccgcgaatggttcgtgatgtgttccgtcttgccaaagaaaatgctcctgcc 820 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || ||||| ||||||||||| ||||| || |||||||| | || |||||||| || || Sbjct: 821 attatatttattgatgaggtagatgcaattgccactgcgaggtttgatgctcaaactgga 880 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 ||||| | || || |||||||| ||||||| | || ||||| |||||||||||||| Sbjct: 881 gctgatagggaggtccagcgtatcttgatggagttgcttaatcaaatggatggatttgac 940 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgct 305 ||||| ||||||||||| ||||| |||||||| || | || |||||| | |||||||| Sbjct: 941 cagactgtgaatgtgaaagttatcatggcaactaacagagctgatactttggatcctgca 1000 Query: 306 ctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcag 365 || |||||||| ||||| || || |||| ||||| || ||| |||| ||| || | || Sbjct: 1001 cttctgcgtcctggaaggcttgatcggaagattgaatttcctttgcctgataggcgtcaa 1060 Query: 366 aagaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttg 425 |||||||||||||| || || |||||||||||||||||||| |||| |||||||| ||| Sbjct: 1061 aagaggcttgtttttcaggtctgtactgctaagatgaacttaggtgacgaggttgacttg 1120 Query: 426 gaagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttgccag 485 ||||||||||| || | ||||||||||| ||||||||||| || | ||||| || ||| Sbjct: 1121 gaagattatgtttctcgccctgataaaattagtgctgctgagattgcagctatatgtcag 1180 Query: 486 gaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcgag 545 ||||| || |||||||| || || || ||||| ||||| || |||||||||||||| || Sbjct: 1181 gaagcaggtatgcatgcagtgcgaaagaatcgatatgtcatactccccaaggactttgaa 1240 Query: 546 aagggttaccgaaccaatgtcaagaagcc 574 ||||||||| | |||||||| |||||||| Sbjct: 1241 aagggttacaggaccaatgtgaagaagcc 1269
>ref|NM_125214.4| Arabidopsis thaliana RPT3; ATPase AT5G58290 (RPT3) mRNA, complete cds Length = 1518 Score = 238 bits (120), Expect = 2e-59 Identities = 456/568 (80%) Strand = Plus / Plus Query: 7 atcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgg 66 ||||||| |||||||| || || || || ||||| || ||||||||||| ||||| || | Sbjct: 709 atcacacaactgctgccttcattagggttgttggatccgagtttgtgcaaaagtatctcg 768 Query: 67 gtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggcta 126 | ||||| || | |||||||| ||||| ||||| | || || || ||||| || |||| Sbjct: 769 gcgagggacctcgtatggttcgtgatgtcttccgtcttgccaaggaaaatgctccagcta 828 Query: 127 taatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccgggg 186 | || |||||||||||||| ||||| || || |||||| | || |||||||| || || | Sbjct: 829 tcatcttcattgatgaggtagatgccatcgctactgctaggtttgatgctcaaacaggag 888 Query: 187 ctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgatc 246 | || | ||||||||||||||||| ||||| || || |||||||||||||||||||| | Sbjct: 889 ccgatagggaagttcagcgtattctcatggagcttcttaatcagatggatggatttgacc 948 Query: 247 agacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgctc 306 |||| |||||||| ||||| ||||||||||| || ||||||| |||||||||||||||| Sbjct: 949 agaccgtgaatgtcaaggtcataatggcaacaaacagggcagacactctagatcctgctc 1008 Query: 307 tgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcaga 366 | | ||||| |||||||| || | || ||||||||||| || || ||| | | || | Sbjct: 1009 tcttacgtcctggaagacttgatcgtaagattgagttcccccttcctgatagacgtcaaa 1068 Query: 367 agaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttgg 426 |||||||||||||||| || || || | || |||||| | || ||||||||||| |||| Sbjct: 1069 agaggcttgttttccaggtatgcacctccaaaatgaaccttagcgatgaggttgacttgg 1128 Query: 427 aagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttgccagg 486 |||| ||||| || | ||||||||||| || |||||||| || | || |||||||||| Sbjct: 1129 aagactatgtttcacggcctgataaaattagcgctgctgagatagcagcaatttgccagg 1188 Query: 487 aagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcgaga 546 ||||||| |||||||| || || || || | ||||| || || || ||||| ||||||| Sbjct: 1189 aagctggtatgcatgcggtgcgaaagaacagatatgtgatactacctaaggatttcgaga 1248 Query: 547 agggttaccgaaccaatgtcaagaagcc 574 |||| ||||| | ||||| |||||||| Sbjct: 1249 agggctaccgcgcaaatgttaagaagcc 1276
>gb|BT020373.1| Arabidopsis thaliana At5g58290 gene, complete cds Length = 1227 Score = 238 bits (120), Expect = 2e-59 Identities = 456/568 (80%) Strand = Plus / Plus Query: 7 atcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgg 66 ||||||| |||||||| || || || || ||||| || ||||||||||| ||||| || | Sbjct: 632 atcacacaactgctgccttcattagggttgttggatccgagtttgtgcaaaagtatctcg 691 Query: 67 gtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggcta 126 | ||||| || | |||||||| ||||| ||||| | || || || ||||| || |||| Sbjct: 692 gcgagggacctcgtatggttcgtgatgtcttccgtcttgccaaggaaaatgctccagcta 751 Query: 127 taatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccgggg 186 | || |||||||||||||| ||||| || || |||||| | || |||||||| || || | Sbjct: 752 tcatcttcattgatgaggtagatgccatcgctactgctaggtttgatgctcaaacaggag 811 Query: 187 ctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgatc 246 | || | ||||||||||||||||| ||||| || || |||||||||||||||||||| | Sbjct: 812 ccgatagggaagttcagcgtattctcatggagcttcttaatcagatggatggatttgacc 871 Query: 247 agacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgctc 306 |||| |||||||| ||||| ||||||||||| || ||||||| |||||||||||||||| Sbjct: 872 agaccgtgaatgtcaaggtcataatggcaacaaacagggcagacactctagatcctgctc 931 Query: 307 tgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcaga 366 | | ||||| |||||||| || | || ||||||||||| || || ||| | | || | Sbjct: 932 tcttacgtcctggaagacttgatcgtaagattgagttcccccttcctgatagacgtcaaa 991 Query: 367 agaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttgg 426 |||||||||||||||| || || || | || |||||| | || ||||||||||| |||| Sbjct: 992 agaggcttgttttccaggtatgcacctccaaaatgaaccttagcgatgaggttgacttgg 1051 Query: 427 aagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttgccagg 486 |||| ||||| || | ||||||||||| || |||||||| || | || |||||||||| Sbjct: 1052 aagactatgtttcacggcctgataaaattagcgctgctgagatagcagcaatttgccagg 1111 Query: 487 aagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcgaga 546 ||||||| |||||||| || || || || | ||||| || || || ||||| ||||||| Sbjct: 1112 aagctggtatgcatgcggtgcgaaagaacagatatgtgatactacctaaggatttcgaga 1171 Query: 547 agggttaccgaaccaatgtcaagaagcc 574 |||| ||||| | ||||| |||||||| Sbjct: 1172 agggctaccgcgcaaatgttaagaagcc 1199
>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 1950 Score = 238 bits (120), Expect = 2e-59 Identities = 456/568 (80%) Strand = Plus / Plus Query: 7 atcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgg 66 ||||||| |||||||| || || || || ||||| || ||||||||||| ||||| || | Sbjct: 1148 atcacacaactgctgccttcattagggttgttggatccgagtttgtgcaaaagtatctcg 1207 Query: 67 gtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggcta 126 | ||||| || | |||||||| ||||| ||||| | || || || ||||| || |||| Sbjct: 1208 gcgagggacctcgtatggttcgtgatgtcttccgtcttgccaaggaaaatgctccagcta 1267 Query: 127 taatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccgggg 186 | || |||||||||||||| ||||| || || |||||| | || |||||||| || || | Sbjct: 1268 tcatcttcattgatgaggtagatgccatcgctactgctaggtttgatgctcaaacaggag 1327 Query: 187 ctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgatc 246 | || | ||||||||||||||||| ||||| || || |||||||||||||||||||| | Sbjct: 1328 ccgatagggaagttcagcgtattctcatggagcttcttaatcagatggatggatttgacc 1387 Query: 247 agacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgctc 306 |||| |||||||| ||||| ||||||||||| || ||||||| |||||||||||||||| Sbjct: 1388 agaccgtgaatgtcaaggtcataatggcaacaaacagggcagacactctagatcctgctc 1447 Query: 307 tgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcaga 366 | | ||||| |||||||| || | || ||||||||||| || || ||| | | || | Sbjct: 1448 tcttacgtcctggaagacttgatcgtaagattgagttcccccttcctgatagacgtcaaa 1507 Query: 367 agaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttgg 426 |||||||||||||||| || || || | || |||||| | || ||||||||||| |||| Sbjct: 1508 agaggcttgttttccaggtatgcacctccaaaatgaaccttagcgatgaggttgacttgg 1567 Query: 427 aagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttgccagg 486 |||| ||||| || | ||||||||||| || |||||||| || | || |||||||||| Sbjct: 1568 aagactatgtttcacggcctgataaaattagcgctgctgagatagcagcaatttgccagg 1627 Query: 487 aagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcgaga 546 ||||||| |||||||| || || || || | ||||| || || || ||||| ||||||| Sbjct: 1628 aagctggtatgcatgcggtgcgaaagaacagatatgtgatactacctaaggatttcgaga 1687 Query: 547 agggttaccgaaccaatgtcaagaagcc 574 |||| ||||| | ||||| |||||||| Sbjct: 1688 agggctaccgcgcaaatgttaagaagcc 1715
>gb|AF123392.1|AF123392 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, complete cds Length = 1301 Score = 238 bits (120), Expect = 2e-59 Identities = 456/568 (80%) Strand = Plus / Plus Query: 7 atcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgg 66 ||||||| |||||||| || || || || ||||| || ||||||||||| ||||| || | Sbjct: 673 atcacacaactgctgccttcattagggttgttggatccgagtttgtgcaaaagtatctcg 732 Query: 67 gtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggcta 126 | ||||| || | |||||||| ||||| ||||| | || || || ||||| || |||| Sbjct: 733 gcgagggacctcgtatggttcgtgatgtcttccgtcttgccaaggaaaatgctccagcta 792 Query: 127 taatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccgggg 186 | || |||||||||||||| ||||| || || |||||| | || |||||||| || || | Sbjct: 793 tcatcttcattgatgaggtagatgccatcgctactgctaggtttgatgctcaaacaggag 852 Query: 187 ctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgatc 246 | || | ||||||||||||||||| ||||| || || |||||||||||||||||||| | Sbjct: 853 ccgatagggaagttcagcgtattctcatggagcttcttaatcagatggatggatttgacc 912 Query: 247 agacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgctc 306 |||| |||||||| ||||| ||||||||||| || ||||||| |||||||||||||||| Sbjct: 913 agaccgtgaatgtcaaggtcataatggcaacaaacagggcagacactctagatcctgctc 972 Query: 307 tgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcaga 366 | | ||||| |||||||| || | || ||||||||||| || || ||| | | || | Sbjct: 973 tcttacgtcctggaagacttgatcgtaagattgagttcccccttcctgatagacgtcaaa 1032 Query: 367 agaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttgg 426 |||||||||||||||| || || || | || |||||| | || ||||||||||| |||| Sbjct: 1033 agaggcttgttttccaggtatgcacctccaaaatgaaccttagcgatgaggttgacttgg 1092 Query: 427 aagattatgtctccagacctgataaaatcagtgctgctgatatcactgctatttgccagg 486 |||| ||||| || | ||||||||||| || |||||||| || | || |||||||||| Sbjct: 1093 aagactatgtttcacggcctgataaaattagcgctgctgagatagcagcaatttgccagg 1152 Query: 487 aagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcgaga 546 ||||||| |||||||| || || || || | ||||| || || || ||||| ||||||| Sbjct: 1153 aagctggtatgcatgcggtgcgaaagaacagatatgtgatactacctaaggatttcgaga 1212 Query: 547 agggttaccgaaccaatgtcaagaagcc 574 |||| ||||| | ||||| |||||||| Sbjct: 1213 agggctaccgcgcaaatgttaagaagcc 1240
>emb|BX831136.1|CNS09ZEE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1414 Score = 224 bits (113), Expect = 3e-55 Identities = 456/569 (80%), Gaps = 1/569 (0%) Strand = Plus / Plus Query: 7 atcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgg 66 ||||||| |||||||| || || || || ||||| || ||||||||||| ||||| || | Sbjct: 662 atcacacaactgctgccttcattagggttgttggatccgagtttgtgcaaaagtatctcg 721 Query: 67 gtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggcta 126 | ||||| || | |||||||| ||||| ||||| | || || || ||||| || |||| Sbjct: 722 gcgagggacctcgtatggttcgtgatgtcttccgtcttgccaaggaaaatgctccagcta 781 Query: 127 taatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccgggg 186 | || |||||||||||||| ||||| || || |||||| | || |||||||| || || | Sbjct: 782 tcatcttcattgatgaggtagatgccatcgctactgctaggtttgatgctcaaacaggag 841 Query: 187 ctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgatc 246 | || | ||||||||||||||||| ||||| || || |||||||||||||||||||| | Sbjct: 842 ccgatagggaagttcagcgtattctcatggagcttcttaatcagatggatggatttgacc 901 Query: 247 agacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgctc 306 |||| |||||||| ||||| ||||||||||| || ||||||| |||||||||||||||| Sbjct: 902 agaccgtgaatgtcaaggtcataatggcaacaaacagggcagacactctagatcctgctc 961 Query: 307 tgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcaga 366 | | ||||| |||||||| || | || ||||||||||| || || ||| | | || | Sbjct: 962 tcttacgtcctggaagacttgatcgtaagattgagttcccccttcctgatagacgtcaaa 1021 Query: 367 agaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttgg 426 |||||||||||||||| || || || | || |||||| | || ||||||||||| |||| Sbjct: 1022 agaggcttgttttccaggtatgcacctccaaaatgaaccttagcgatgaggttgacttgg 1081 Query: 427 aagattat-gtctccagacctgataaaatcagtgctgctgatatcactgctatttgccag 485 |||| ||| || || | ||||||||||| || |||||||| || | || ||||||||| Sbjct: 1082 aagactatcgtttcacggcctgataaaattagcgctgctgagatagcagcaatttgccag 1141 Query: 486 gaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcgag 545 |||||||| |||||||| || || || || | ||||| || || || ||||| |||||| Sbjct: 1142 gaagctggtatgcatgcggtgcgaaagaacagatatgtgatactacctaaggatttcgag 1201 Query: 546 aagggttaccgaaccaatgtcaagaagcc 574 ||||| ||||| | ||||| |||||||| Sbjct: 1202 aagggctaccgcgcaaatgttaagaagcc 1230
>emb|BX831437.1|CNS09ZEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1389 Score = 216 bits (109), Expect = 6e-53 Identities = 455/569 (79%), Gaps = 1/569 (0%) Strand = Plus / Plus Query: 7 atcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgg 66 ||||||| |||||||| || || || || ||||| || ||||||||||| ||||| || | Sbjct: 737 atcacacaactgctgccttcattagggttgttggatccgagtttgtgcaaaagtatctcg 796 Query: 67 gtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggcta 126 | ||||| || | |||||||| ||||| ||||| | || || || ||||| || |||| Sbjct: 797 gcgagggacctcgtatggttcgtgatgtcttccgtcttgccaaggaaaatgctccagcta 856 Query: 127 taatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccgggg 186 | || |||||||||||||| ||||| || || |||||| | || |||||||| || || | Sbjct: 857 tcatcttcattgatgaggtagatgccatcgctactgctaggtttgatgctcaaacaggag 916 Query: 187 ctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgatc 246 | || | ||||||||||||||||| ||||| || || |||||||||||||||| ||| | Sbjct: 917 ccgatagggaagttcagcgtattctcatggagcttctcaatcagatggatggatctgacc 976 Query: 247 agacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgctc 306 |||| |||||||| ||||| ||||||||||| || ||||||| |||||||||||||||| Sbjct: 977 agaccgtgaatgtcaaggtcataatggcaacaaacagggcagacactctagatcctgctc 1036 Query: 307 tgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcaga 366 | | ||||| |||||||| || | || ||||||||||| || || ||| | | || | Sbjct: 1037 tcttacgtcctggaagacttgatcgtaagattgagttcccccttcctgatagacgtcaaa 1096 Query: 367 agaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttgg 426 ||||||| |||||||| || || || | || |||||| | || ||||||||||| |||| Sbjct: 1097 agaggctcgttttccaggtatgcacctccaaaatgaaccttagcgatgaggttgacttgg 1156 Query: 427 aagattat-gtctccagacctgataaaatcagtgctgctgatatcactgctatttgccag 485 |||| ||| ||||| | ||||||||||| || |||||||| || | || ||||||||| Sbjct: 1157 aagactatcgtctcacggcctgataaaattagcgctgctgagatagcagcaatttgccag 1216 Query: 486 gaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcgag 545 |||||||| |||||||| || || || || | ||||| || || || ||||| |||||| Sbjct: 1217 gaagctggtatgcatgcggtgcgaaagaacagatatgtgatactacctaaggatttcgag 1276 Query: 546 aagggttaccgaaccaatgtcaagaagcc 574 ||||| ||||| | ||||| |||||||| Sbjct: 1277 aagggctaccgcgcaaatgttaagaagcc 1305
>emb|BX831143.1|CNS09ZD2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 210 bits (106), Expect = 4e-51 Identities = 456/570 (80%), Gaps = 2/570 (0%) Strand = Plus / Plus Query: 7 atcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgg 66 ||||||| |||||||| || || || || ||||| || ||||||||||| ||||| || | Sbjct: 681 atcacacaactgctgccttcattagggttgttggatccgagtttgtgcaaaagtatctcg 740 Query: 67 gtgagggcccaaggatgg-ttcgagatgtattccgcttagctaaagagaatgccccggct 125 | ||||| || | |||| |||| ||||| ||||| | || || || ||||| || ||| Sbjct: 741 gcgagggacctcgtatgggttcgtgatgtcttccgtcttgccaaggaaaatgctccagct 800 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || || |||||||||||||| ||||| || || |||||| | || |||||||| || || Sbjct: 801 atcatcttcattgatgaggtagatgccatcgctactgctaggtttgatgctcaaacagga 860 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 || || | ||||||||||||||||| ||||| || || |||||||||||||||||||| Sbjct: 861 gccgatagggaagttcagcgtattctcatggagcttcttaatcagatggatggatttgac 920 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgct 305 ||||| |||||||| ||||| ||||||||||| || ||||||| ||||||||||||||| Sbjct: 921 cagaccgtgaatgtcaaggtcataatggcaacaaacagggcagacactctagatcctgct 980 Query: 306 ctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggaggcag 365 || | ||||| |||||||| || | || ||||||||||| || || ||| | | || Sbjct: 981 ctcttacgtcctggaagacttgatcgtaagattgagttcccccttcctgatagacgtcaa 1040 Query: 366 aagaggcttgttttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttg 425 ||||||||||||||||| || || || | || |||||| | || ||||||||||| ||| Sbjct: 1041 aagaggcttgttttccaggtatgcacctccaaaatgaaccttagcgatgaggttgacttg 1100 Query: 426 gaagattat-gtctccagacctgataaaatcagtgctgctgatatcactgctatttgcca 484 ||||| ||| || || | ||||||||||| || |||||||| || | || |||||||| Sbjct: 1101 gaagactatcgtttcacggcctgataaaattagcgctgctgagatagcagcaatttgcca 1160 Query: 485 ggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaaggacttcga 544 ||||||||| |||||||| || || || || | ||||| || || || ||||| ||||| Sbjct: 1161 ggaagctggtatgcatgcggtgcgaaagaacagatatgtgatactacctaaggatttcga 1220 Query: 545 gaagggttaccgaaccaatgtcaagaagcc 574 |||||| ||||| | ||||| |||||||| Sbjct: 1221 gaagggctaccgcgcaaatgttaagaagcc 1250
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 208 bits (105), Expect = 2e-50 Identities = 126/133 (94%) Strand = Plus / Plus Query: 472 ctgctatttgccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctcc 531 ||||||| || || |||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 13062491 ctgctatctgtcaagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctcc 13062550 Query: 532 ccaaggacttcgagaagggttaccgaaccaatgtcaagaagcctgagtcagactttgact 591 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 13062551 ccaaggacttcgagaagggttaccgaaccaatgtcaagaagcctgagactgactttgact 13062610 Query: 592 tctacaaatgagg 604 ||||||||||||| Sbjct: 13062611 tctacaaatgagg 13062623 Score = 208 bits (105), Expect = 2e-50 Identities = 141/153 (92%) Strand = Plus / Plus Query: 78 aggatggttcgagatgtattccgcttagctaaagagaatgccccggctataatattcatt 137 ||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 13060089 aggatggttcgagatgtattccgtttggctaaagagaatgccccagctatcatattcatc 13060148 Query: 138 gatgaggttgatgctatagccactgctcgattcgatgctcagaccggggctgaccgagaa 197 |||||||||||||||||||| |||||||| || ||||||||||| || |||||||||||| Sbjct: 13060149 gatgaggttgatgctatagcaactgctcgttttgatgctcagactggtgctgaccgagaa 13060208 Query: 198 gttcagcgtattctgatggaactactgaatcag 230 |||||||||||||| ||||||||||| |||||| Sbjct: 13060209 gttcagcgtattcttatggaactactcaatcag 13060241 Score = 186 bits (94), Expect = 6e-44 Identities = 142/158 (89%) Strand = Plus / Plus Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 13060480 cagatggatggatttgatcaaacagtgaatgtgaaggttataatggcgaccaacagggcg 13060539 Query: 288 gatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccct 347 ||||| ||||| ||||||||| | |||||||| ||| ||||||||||||| ||||||||| Sbjct: 13060540 gataccctagaccctgctctgttacgtccaggtagattggacaggaaaatcgagttccct 13060599 Query: 348 ctgccggatcggaggcagaagaggcttgttttccaagt 385 || || ||||| ||||||||||||||||||||||||| Sbjct: 13060600 cttccagatcgtcggcagaagaggcttgttttccaagt 13060637 Score = 133 bits (67), Expect = 7e-28 Identities = 85/91 (93%) Strand = Plus / Plus Query: 377 tttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttggaagattatgt 436 |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 13061612 tttccaggtctgtactgctaaaatgaacttgagtgatgaggttgatttggaagattatgt 13061671 Query: 437 ctccagacctgataaaatcagtgctgctgat 467 |||||||| |||||||| |||||||||||| Sbjct: 13061672 ttccagaccagataaaattagtgctgctgat 13061702 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 13059513 ggcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagta 13059572 Query: 62 cctgggtgagg 72 ||||||||||| Sbjct: 13059573 cctgggtgagg 13059583 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 210 ctgatggaactactgaatcagatggatggatttgat 245 ||||||||||| || |||||| | |||||||||||| Sbjct: 5597039 ctgatggaactgctaaatcagttagatggatttgat 5597004
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 208 bits (105), Expect = 2e-50 Identities = 126/133 (94%) Strand = Plus / Plus Query: 472 ctgctatttgccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctcc 531 ||||||| || || |||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 39068 ctgctatctgtcaagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctcc 39127 Query: 532 ccaaggacttcgagaagggttaccgaaccaatgtcaagaagcctgagtcagactttgact 591 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 39128 ccaaggacttcgagaagggttaccgaaccaatgtcaagaagcctgagactgactttgact 39187 Query: 592 tctacaaatgagg 604 ||||||||||||| Sbjct: 39188 tctacaaatgagg 39200 Score = 208 bits (105), Expect = 2e-50 Identities = 141/153 (92%) Strand = Plus / Plus Query: 78 aggatggttcgagatgtattccgcttagctaaagagaatgccccggctataatattcatt 137 ||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 36666 aggatggttcgagatgtattccgtttggctaaagagaatgccccagctatcatattcatc 36725 Query: 138 gatgaggttgatgctatagccactgctcgattcgatgctcagaccggggctgaccgagaa 197 |||||||||||||||||||| |||||||| || ||||||||||| || |||||||||||| Sbjct: 36726 gatgaggttgatgctatagcaactgctcgttttgatgctcagactggtgctgaccgagaa 36785 Query: 198 gttcagcgtattctgatggaactactgaatcag 230 |||||||||||||| ||||||||||| |||||| Sbjct: 36786 gttcagcgtattcttatggaactactcaatcag 36818 Score = 186 bits (94), Expect = 6e-44 Identities = 142/158 (89%) Strand = Plus / Plus Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 37057 cagatggatggatttgatcaaacagtgaatgtgaaggttataatggcgaccaacagggcg 37116 Query: 288 gatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccct 347 ||||| ||||| ||||||||| | |||||||| ||| ||||||||||||| ||||||||| Sbjct: 37117 gataccctagaccctgctctgttacgtccaggtagattggacaggaaaatcgagttccct 37176 Query: 348 ctgccggatcggaggcagaagaggcttgttttccaagt 385 || || ||||| ||||||||||||||||||||||||| Sbjct: 37177 cttccagatcgtcggcagaagaggcttgttttccaagt 37214 Score = 133 bits (67), Expect = 7e-28 Identities = 85/91 (93%) Strand = Plus / Plus Query: 377 tttccaagtttgtactgctaagatgaacttgagtgatgaggttgatttggaagattatgt 436 |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 38189 tttccaggtctgtactgctaaaatgaacttgagtgatgaggttgatttggaagattatgt 38248 Query: 437 ctccagacctgataaaatcagtgctgctgat 467 |||||||| |||||||| |||||||||||| Sbjct: 38249 ttccagaccagataaaattagtgctgctgat 38279 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 36090 ggcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagta 36149 Query: 62 cctgggtgagg 72 ||||||||||| Sbjct: 36150 cctgggtgagg 36160
>dbj|AK153991.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430019J12 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1409 Score = 168 bits (85), Expect = 1e-38 Identities = 280/345 (81%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 714 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 773 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 774 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 833 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 834 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 893 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 894 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 953 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 954 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 1013 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 1014 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1058
>dbj|AK160718.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010086G18 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1375 Score = 168 bits (85), Expect = 1e-38 Identities = 280/345 (81%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 685 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 744 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 745 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 804 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 805 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 864 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 865 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 924 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 925 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 984 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 985 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1029
>dbj|AK160644.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810035H13 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1382 Score = 168 bits (85), Expect = 1e-38 Identities = 280/345 (81%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 693 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 752 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 753 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 812 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 813 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 872 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 873 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 932 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 933 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 992 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 993 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1037
>dbj|AK167041.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0028L02 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1374 Score = 168 bits (85), Expect = 1e-38 Identities = 280/345 (81%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 676 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 735 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 736 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 795 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 796 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 855 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 856 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 915 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 916 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 975 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 976 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1020
>dbj|AK169224.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920092H04 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1388 Score = 168 bits (85), Expect = 1e-38 Identities = 280/345 (81%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 694 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 753 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 754 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 813 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 814 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 873 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 874 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 933 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 934 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 993 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 994 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1038
>dbj|AK077507.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730428I01 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1388 Score = 168 bits (85), Expect = 1e-38 Identities = 280/345 (81%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 694 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 753 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 754 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 813 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 814 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 873 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 874 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 933 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 934 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 993 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 994 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1038
>gb|U43398.1|STU43398 Solanum tuberosum POTATP1 mRNA, complete cds Length = 1473 Score = 168 bits (85), Expect = 1e-38 Identities = 208/249 (83%) Strand = Plus / Plus Query: 33 gtggttggttcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagat 92 |||||||| ||||| ||||| ||||||||| |||| ||||| ||| | |||||||| ||| Sbjct: 695 gtggttggctcagaatttgttcagaagtacttgggcgagggtccacgaatggttcgtgat 754 Query: 93 gtattccgcttagctaaagagaatgccccggctataatattcattgatgaggttgatgct 152 || |||||| | || ||||| ||||| || || || || || ||||||||||||||||| Sbjct: 755 gtcttccgccttgccaaagaaaatgctccagcaatcatttttattgatgaggttgatgca 814 Query: 153 atagccactgctcgattcgatgctcagaccggggctgaccgagaagttcagcgtattctg 212 || || |||||| | || ||||||||||| || ||||| |||| || |||||||| || Sbjct: 815 attgctactgctaggtttgatgctcagactggagctgatagagaggtccagcgtatcctc 874 Query: 213 atggaactactgaatcagatggatggatttgatcagacagtgaatgtgaaggttataatg 272 ||||| ||||| |||||||||||||| ||||| || |||||||||||||| ||||| ||| Sbjct: 875 atggagctactaaatcagatggatgggtttgaccaaacagtgaatgtgaaagttattatg 934 Query: 273 gcaaccaat 281 ||||||||| Sbjct: 935 gcaaccaat 943 Score = 155 bits (78), Expect = 2e-34 Identities = 174/206 (84%) Strand = Plus / Plus Query: 393 gctaagatgaacttgagtgatgaggttgatttggaagattatgtctccagacctgataaa 452 |||||||||||||| ||||||||||||| |||||||||||||| || | ||||||||| Sbjct: 1055 gctaagatgaacttaggtgatgaggttgacttggaagattatgtttctcgccctgataaa 1114 Query: 453 atcagtgctgctgatatcactgctatttgccaggaagctggcatgcatgctgtccgcaaa 512 |||||||||||||| || || ||||| || || |||||||| |||||||| || ||||| Sbjct: 1115 atcagtgctgctgagattacggctatctgtcaagaagctggtatgcatgcagtgcgcaag 1174 Query: 513 aatcggtatgttatcctccccaaggacttcgagaagggttaccgaaccaatgtcaagaag 572 ||||| ||||| ||||| || |||||||| || ||||||||| | || || || |||||| Sbjct: 1175 aatcgatatgtcatccttccaaaggactttgaaaagggttacaggacaaacgtgaagaag 1234 Query: 573 cctgagtcagactttgacttctacaa 598 ||||| | |||||||| |||||||| Sbjct: 1235 cctgacactgactttgaattctacaa 1260
>gb|BC012708.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:13997 IMAGE:4211677), complete cds Length = 1406 Score = 161 bits (81), Expect = 3e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 692 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 751 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 752 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 811 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 812 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 871 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||| ||||||||||| ||||||||||| Sbjct: 872 aggagctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatt 931 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 932 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 991 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 992 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1036
>dbj|AK150989.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830019K15 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 972 Score = 161 bits (81), Expect = 3e-36 Identities = 225/273 (82%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 686 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 745 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 746 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 805 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 806 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 865 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 866 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 925 Query: 242 tgatcagacagtgaatgtgaaggttataatggc 274 ||| |||| || ||||||||||| || ||||| Sbjct: 926 tgaccagaacgtcaatgtgaaggtaatcatggc 958
>dbj|AK167528.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018N08 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1380 Score = 161 bits (81), Expect = 3e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| ||||||| Sbjct: 686 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttaagaagta 745 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 746 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 805 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 806 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 865 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 866 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 925 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 926 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 985 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 986 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1030
>dbj|AK169244.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920097L15 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1883 Score = 161 bits (81), Expect = 3e-36 Identities = 225/273 (82%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 1194 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 1253 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 1254 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 1313 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 1314 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 1373 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 1374 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 1433 Query: 242 tgatcagacagtgaatgtgaaggttataatggc 274 ||| |||| || ||||||||||| || ||||| Sbjct: 1434 tgaccagaacgtcaatgtgaaggtaatcatggc 1466
>dbj|AK050677.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030002E20 product:proteasome (prosome, macropain) 26S subunit, ATPase, 4, full insert sequence Length = 1403 Score = 161 bits (81), Expect = 3e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 709 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 768 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 769 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 828 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| ||||||||| ||||| Sbjct: 829 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatggccagac 888 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||||||||||||||| ||||||||||| Sbjct: 889 aggagctgacagggaggttcagaggatcctgctggaactactgaatcaaatggatggatt 948 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 949 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 1008 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 1009 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1053
>gb|BC094063.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone IMAGE:4160213), partial cds Length = 777 Score = 161 bits (81), Expect = 3e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 49 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 108 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 109 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 168 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 169 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 228 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||| ||||||||||| ||||||||||| Sbjct: 229 aggagctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatt 288 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 289 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 348 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 349 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 393
>gb|BC092265.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:103150 IMAGE:3671250), complete cds Length = 1411 Score = 161 bits (81), Expect = 3e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 675 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 734 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 735 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 794 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 795 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 854 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||| ||||||||||| ||||||||||| Sbjct: 855 aggagctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatt 914 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 915 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 974 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 975 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1019
>ref|NM_011874.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4 (Psmc4), mRNA Length = 1371 Score = 161 bits (81), Expect = 3e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 682 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 741 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 742 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 801 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 802 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 861 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||| ||||||||||| ||||||||||| Sbjct: 862 aggagctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatt 921 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 922 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 981 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 982 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1026
>gb|L76223.1|MUSCIP21R Mus musculus 26S proteasome ATPase (CIP21) mRNA, complete cds Length = 1371 Score = 161 bits (81), Expect = 3e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || || |||||||| |||||||| Sbjct: 682 ggcacatcacacgacagctgcatttatccgtgtggtgggctcggagtttgttcagaagta 741 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| ||||||| || ||||| |||||| ||||||| |||||||| || Sbjct: 742 cctgggtgagggcccccggatggtccgggatgtgttccgcctagctaaggagaatgcacc 801 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 802 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 861 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||| ||||||||||| ||||||||||| Sbjct: 862 aggagctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatt 921 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| |||| || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 922 tgaccagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 981 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||| ||||| |||||| | |||||| | |||||||| ||||| Sbjct: 982 agctctactgcggccaggacgcctggaccgaaaaattgaattccc 1026
>ref|NM_001008009.1| Xenopus tropicalis rpt3 protein (rpt3), mRNA Length = 1567 Score = 145 bits (73), Expect = 2e-31 Identities = 274/341 (80%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| ||||| |||||| | ||||| || || ||||| || |||||||||||| Sbjct: 845 catcacactacagctgcctttatccgtgtggtgggctccgagttcgttcagaagtacctg 904 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 || |||||||| | ||||| || ||||| ||||| | || |||||||||||||| || Sbjct: 905 ggagagggccctcgcatggtgcgggatgttttccggctggccaaagagaatgcccccgcc 964 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || ||||| ||||||||| | ||||| || ||||| || || ||||| ||||| || Sbjct: 965 attatatttattgatgagatcgatgccatcgccacaaagcgctttgatgcccagacagga 1024 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 || ||||| || || ||||| |||||| |||| || || || |||||||| |||||||| Sbjct: 1025 gccgaccgcgaggtgcagcgaattctgctggagctccttaaccagatggacggatttgac 1084 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgct 305 |||| |||||||| ||||| || ||||| ||||| |||||||| || |||||||| || Sbjct: 1085 cagaacgtgaatgtaaaggtaatcatggccaccaaccgggcagacacactagatccggca 1144 Query: 306 ctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||||||||| || | || ||||||||||| || ||||| Sbjct: 1145 ctgctgcgtcccgggcgtctcgacaggaaaatagaattccc 1185
>gb|BC080888.1| Xenopus tropicalis rpt3 protein, mRNA (cDNA clone MGC:79492 IMAGE:6976743), complete cds Length = 1567 Score = 145 bits (73), Expect = 2e-31 Identities = 274/341 (80%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| ||||| |||||| | ||||| || || ||||| || |||||||||||| Sbjct: 845 catcacactacagctgcctttatccgtgtggtgggctccgagttcgttcagaagtacctg 904 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 || |||||||| | ||||| || ||||| ||||| | || |||||||||||||| || Sbjct: 905 ggagagggccctcgcatggtgcgggatgttttccggctggccaaagagaatgcccccgcc 964 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || ||||| ||||||||| | ||||| || ||||| || || ||||| ||||| || Sbjct: 965 attatatttattgatgagatcgatgccatcgccacaaagcgctttgatgcccagacagga 1024 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 || ||||| || || ||||| |||||| |||| || || || |||||||| |||||||| Sbjct: 1025 gccgaccgcgaggtgcagcgaattctgctggagctccttaaccagatggacggatttgac 1084 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgct 305 |||| |||||||| ||||| || ||||| ||||| |||||||| || |||||||| || Sbjct: 1085 cagaacgtgaatgtaaaggtaatcatggccaccaaccgggcagacacactagatccggca 1144 Query: 306 ctgctgcgtccaggaagactggacaggaaaattgagttccc 346 ||||||||||| || | || ||||||||||| || ||||| Sbjct: 1145 ctgctgcgtcccgggcgtctcgacaggaaaatagaattccc 1185
>emb|CR760183.2| Xenopus tropicalis finished cDNA, clone TNeu103i01 Length = 1379 Score = 137 bits (69), Expect = 5e-29 Identities = 273/341 (80%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| ||||| |||||| | ||||| || || ||||| || |||||||||||| Sbjct: 675 catcacactacagctgcctttatccgtgtggtgggctccgagttcgttcagaagtacctg 734 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 || |||||||| | ||||| || ||||| ||||| | || |||||||||||||| || Sbjct: 735 ggagagggccctcgcatggtgcgggatgttttccggctggccaaagagaatgcccccgcc 794 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || ||||| ||||||||| | ||||| || ||||| || || ||||| ||||| || Sbjct: 795 attatatttattgatgagatcgatgccatcgccacaaagcgctttgatgcccagacagga 854 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 || ||||| || || ||||| |||||| |||| || || || |||||||| |||||||| Sbjct: 855 gccgaccgcgaggtgcagcgaattctgctggagctccttaaccagatggacggatttgac 914 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgct 305 |||| |||||||| ||||| || ||||| ||||| |||||||| || |||||||| || Sbjct: 915 cagaacgtgaatgtaaaggtaatcatggccaccaaccgggcagacacactagatccggca 974 Query: 306 ctgctgcgtccaggaagactggacaggaaaattgagttccc 346 |||||||| || || | || ||||||||||| || ||||| Sbjct: 975 ctgctgcgccccgggcgtctcgacaggaaaatagaattccc 1015
>gb|BC060362.1| Xenopus laevis proteasome 26S ATPase subunit 4 isoform 1, mRNA (cDNA clone MGC:68784 IMAGE:4202064), complete cds Length = 1397 Score = 133 bits (67), Expect = 7e-28 Identities = 250/311 (80%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| ||||| |||||| | ||||| || || |||||||| |||||||||||| Sbjct: 681 catcacactacagctgcctttatccgtgtggtgggctccgagtttgtacagaagtacctg 740 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 || ||||| || | ||||| || ||||| |||||| | || ||||||||||||||||| Sbjct: 741 ggagaggggcctcgcatggtgcgggatgttttccgcctggccaaagagaatgccccggcc 800 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || ||||| |||||||| | ||||| || ||||| | || ||||| || || || Sbjct: 801 attatatttattgatgaaatcgatgccattgccacaaagaggtttgatgcccaaacggga 860 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 ||||||||||| |||||| | |||||| ||||||| || || ||||||||||||||||| Sbjct: 861 gctgaccgagaggttcagagaattctgctggaacttcttaaccagatggatggatttgac 920 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgct 305 |||| |||||||| || || || ||||| ||||| |||| || || | ||||| ||| Sbjct: 921 cagaacgtgaatgtaaaagtaatcatggccaccaacagggcggacacattggatccggct 980 Query: 306 ctgctgcgtcc 316 ||||||||||| Sbjct: 981 ctgctgcgtcc 991
>dbj|AB168803.1| Macaca fascicularis testis cDNA, clone: QtsA-14940, similar to human proteasome (prosome, macropain) 26S subunit, ATPase, 4(PSMC4), transcript variant 1, mRNA, RefSeq: NM_006503.2 Length = 1654 Score = 133 bits (67), Expect = 7e-28 Identities = 271/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || ||||||||||| |||||||| Sbjct: 835 ggcacatcacacaacagctgcattcatccgggtcgtgggctcagagtttgtacagaagta 894 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 895 cctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 954 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| |||||| ||||||| || ||||| |||||||||||||||| Sbjct: 955 tgccatcatcttcatagatgagattgatgccattgccaccaagagattcgatgctcagac 1014 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || || ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 1015 gggagccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 1074 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 1075 tgatcagaatgtcaatgtcaaggtgatcatggccacaaacagagcagacaccctggatcc 1134 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 1135 agccctgctacggccaggacggctggaccgtaaaattga 1173
>gb|BC063145.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:72664 IMAGE:6889167), complete cds Length = 1401 Score = 131 bits (66), Expect = 3e-27 Identities = 294/370 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || ||||||||||| |||||||| Sbjct: 679 ggcacatcacacgacagctgcatttatccgtgtggtgggctcagagtttgttcagaagta 738 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 739 cctgggtgagggcccccgaatggtccgggatgtgttccgcctggccaaggagaatgcacc 798 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 799 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 858 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||| ||||||||||| ||||||||||| Sbjct: 859 aggagctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatt 918 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| || | || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 919 tgaccaaaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 978 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggag 361 ||||| || || |||||| | |||||| | |||||||| ||||| || || ||||| | Sbjct: 979 agctctacttcggccaggacgcctggaccgcaaaattgaattcccactccctgatcgtcg 1038 Query: 362 gcagaagagg 371 ||||||||| Sbjct: 1039 ccagaagagg 1048
>ref|NM_057122.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase, 4 (Psmc4), mRNA Length = 1376 Score = 131 bits (66), Expect = 3e-27 Identities = 294/370 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || ||||||||||| |||||||| Sbjct: 669 ggcacatcacacgacagctgcatttatccgtgtggtgggctcagagtttgttcagaagta 728 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 729 cctgggtgagggcccccgaatggtccgggatgtgttccgcctggccaaggagaatgcacc 788 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 789 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 848 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||| ||||||||||| ||||||||||| Sbjct: 849 aggagctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatt 908 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| || | || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 909 tgaccaaaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 968 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggag 361 ||||| || || |||||| | |||||| | |||||||| ||||| || || ||||| | Sbjct: 969 agctctacttcggccaggacgcctggaccgcaaaattgaattcccactccctgatcgtcg 1028 Query: 362 gcagaagagg 371 ||||||||| Sbjct: 1029 ccagaagagg 1038
>dbj|AK117042.1| Ciona intestinalis cDNA, clone:cits021e02, full insert sequence Length = 1474 Score = 131 bits (66), Expect = 3e-27 Identities = 374/474 (78%), Gaps = 2/474 (0%) Strand = Plus / Plus Query: 51 gtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaa 110 |||||||| || |||||||| || ||||||||||| || ||||||||| | | || ||| Sbjct: 747 gtgcagaaatatctgggtgaaggaccaaggatggtacgggatgtattcagacttgccaaa 806 Query: 111 gagaatgccccggctataatattcattgatgaggttgatgctatagccactgctcgattc 170 ||||| |||| || || || ||||||||||| | ||||| || |||||| || || Sbjct: 807 gagaactcccctgccattatcttcattgatgaaatagatgcgatcgccactaagcgtttt 866 Query: 171 gatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaatcag 230 || ||||| || || || || || || || || ||||| || |||||||||| || ||| Sbjct: 867 gacgctcaaactggtgcagatcgtgaggtgcaacgtatcttgctggaactacttaaccag 926 Query: 231 atggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagat 290 |||||||| || ||||| || || ||||| |||||||| ||||| ||||| || || || Sbjct: 927 atggatggcttcgatcaaactgttaatgttaaggttattatggccaccaaccgagctgac 986 Query: 291 actctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccctctg 350 || || |||||||||||||||||||| || | ||||| |||| ||||| ||||| || Sbjct: 987 acgctcgatcctgctctgctgcgtcctggtcgtctggatcggaagattgaattcccgctt 1046 Query: 351 ccggatcggaggcagaagaggcttgttttc-caagtttgtactgctaagatgaacttgag 409 ||||||||||| |||||| | || || ||| | | | | ||||| ||||||||| | || Sbjct: 1047 ccggatcggagacagaagcgtctcgtcttctccactat-tactgggaagatgaacctcag 1105 Query: 410 tgatgaggttgatttggaagattatgtctccagacctgataaaatcagtgctgctgatat 469 ||||| || ||||||||||||||||| || ||||||| ||||||| || ||||||||| Sbjct: 1106 cgatgaagtggatttggaagattatgttgcccgacctgacaaaatcactggtgctgatat 1165 Query: 470 cactgctatttgccaggaagctggcatgcatgctgtccgcaaaaatcggtatgt 523 | ||| |||||||| ||||| ||||||| ||| || || |||| |||||||| Sbjct: 1166 aaatgcaatttgccaagaagcaggcatgcttgcagttcgtgaaaaccggtatgt 1219
>dbj|D50695.1|RATTBP7B Rattus norvegicus mRNA for proteasomal ATPase (Tat-binding protein7), complete cds Length = 1397 Score = 131 bits (66), Expect = 3e-27 Identities = 294/370 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| |||||| | ||||| || ||||||||||| |||||||| Sbjct: 669 ggcacatcacacgacagctgcatttatccgtgtggtgggctcagagtttgttcagaagta 728 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 ||||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 729 cctgggtgagggcccccgaatggtccgggatgtgttccgcctggccaaggagaatgcacc 788 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| ||||| ||||||| || ||||| |||||||||| ||||| Sbjct: 789 tgccatcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagac 848 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 || |||||| | || |||||| | || ||| |||| ||||||||||| ||||||||||| Sbjct: 849 aggagctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatt 908 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 ||| || | || ||||||||||| || ||||| || || | ||||| || | ||||| Sbjct: 909 tgaccaaaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatcc 968 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattgagttccctctgccggatcggag 361 ||||| || || |||||| | |||||| | |||||||| ||||| || || ||||| | Sbjct: 969 agctctacttcggccaggacgcctggaccgcaaaattgaattcccactccctgatcgtcg 1028 Query: 362 gcagaagagg 371 ||||||||| Sbjct: 1029 ccagaagagg 1038
>ref|NM_153001.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 (PSMC4), transcript variant 2, mRNA Length = 1363 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 601 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 660 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 661 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 720 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 721 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 780 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 781 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 840 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 841 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 900 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 901 ggccctgctacggccaggacggctggaccgtaaaattga 939
>ref|NM_006503.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 (PSMC4), transcript variant 1, mRNA Length = 1450 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 694 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 753 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 754 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 813 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 814 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 873 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 874 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 933 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 934 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 993 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 994 ggccctgctacggccaggacggctggaccgtaaaattga 1032
>gb|BC010396.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant 2, mRNA (cDNA clone MGC:13687 IMAGE:4046205), complete cds Length = 1363 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 601 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 660 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 661 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 720 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 721 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 780 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 781 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 840 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 841 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 900 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 901 ggccctgctacggccaggacggctggaccgtaaaattga 939
>gb|BC014488.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant 1, mRNA (cDNA clone MGC:23214 IMAGE:4899042), complete cds Length = 1433 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 677 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 736 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 737 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 796 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 797 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 856 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 857 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 916 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 917 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 976 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 977 ggccctgctacggccaggacggctggaccgtaaaattga 1015
>gb|BC000343.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant 1, mRNA (cDNA clone MGC:8570 IMAGE:2823007), complete cds Length = 1426 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 677 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 736 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 737 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 796 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 797 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 856 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 857 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 916 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 917 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 976 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 977 ggccctgctacggccaggacggctggaccgtaaaattga 1015
>gb|BT008218.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 mRNA, partial cds Length = 1257 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 657 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 716 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 717 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 776 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 777 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 836 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 837 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 896 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 897 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 956 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 957 ggccctgctacggccaggacggctggaccgtaaaattga 995
>gb|BT007232.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 mRNA, complete cds Length = 1257 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 657 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 716 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 717 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 776 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 777 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 836 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 837 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 896 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 897 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 956 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 957 ggccctgctacggccaggacggctggaccgtaaaattga 995
>emb|CR624768.1| full-length cDNA clone CS0DB003YP08 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1094 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 371 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 430 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 431 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 490 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 491 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 550 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 551 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 610 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 611 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 670 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 671 ggccctgctacggccaggacggctggaccgtaaaattga 709
>emb|CR624681.1| full-length cDNA clone CS0DI024YO05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1392 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 674 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 733 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 734 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 793 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 794 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 853 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 854 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 913 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 914 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 973 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 974 ggccctgctacggccaggacggctggaccgtaaaattga 1012
>emb|CR621309.1| full-length cDNA clone CS0DD009YP22 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1375 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 671 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 730 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 731 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 790 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 791 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 850 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 851 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 910 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 911 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 970 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 971 ggccctgctacggccaggacggctggaccgtaaaattga 1009
>emb|CR619473.1| full-length cDNA clone CS0DH005YK15 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1393 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 690 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 749 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 750 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 809 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 810 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 869 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 870 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 929 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 930 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 989 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 990 ggccctgctacggccaggacggctggaccgtaaaattga 1028
>emb|CR616731.1| full-length cDNA clone CS0DI027YF12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1374 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 677 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 736 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 737 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 796 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 797 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 856 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 857 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 916 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 917 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 976 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 977 ggccctgctacggccaggacggctggaccgtaaaattga 1015
>emb|CR607304.1| full-length cDNA clone CS0DI054YC02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1371 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 690 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 749 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 750 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 809 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 810 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 869 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 870 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 929 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 930 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 989 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 990 ggccctgctacggccaggacggctggaccgtaaaattga 1028
>emb|CR606858.1| full-length cDNA clone CS0DI008YH10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1355 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 667 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 726 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 727 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 786 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 787 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 846 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 847 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 906 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 907 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 966 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 967 ggccctgctacggccaggacggctggaccgtaaaattga 1005
>emb|CR604327.1| full-length cDNA clone CS0DE011YH14 of Placenta of Homo sapiens (human) Length = 1403 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 689 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 748 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 749 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 808 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 809 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 868 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 869 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 928 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 929 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 988 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 989 ggccctgctacggccaggacggctggaccgtaaaattga 1027
>emb|CR603370.1| full-length cDNA clone CS0DI020YH15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1351 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 689 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 748 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 749 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 808 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 809 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 868 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 869 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 928 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 929 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 988 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 989 ggccctgctacggccaggacggctggaccgtaaaattga 1027
>emb|CR602157.1| full-length cDNA clone CS0DI077YD19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1387 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 673 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 732 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 733 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 792 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 793 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 852 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 853 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 912 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 913 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 972 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 973 ggccctgctacggccaggacggctggaccgtaaaattga 1011
>emb|CR597394.1| full-length cDNA clone CS0DJ014YC04 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1414 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 690 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 749 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 750 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 809 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 810 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 869 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 870 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 929 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 930 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 989 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 990 ggccctgctacggccaggacggctggaccgtaaaattga 1028
>emb|CR594223.1| full-length cDNA clone CS0DJ006YJ24 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1351 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 676 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 735 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 736 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 795 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 796 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 855 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 856 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 915 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 916 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 975 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 976 ggccctgctacggccaggacggctggaccgtaaaattga 1014
>emb|CR591096.1| full-length cDNA clone CS0DB007YG13 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1385 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 667 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 726 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 727 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 786 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 787 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 846 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 847 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 906 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 907 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 966 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 967 ggccctgctacggccaggacggctggaccgtaaaattga 1005
>ref|XM_942509.1| PREDICTED: Homo sapiens similar to 26S protease regulatory subunit 6B (MIP224) (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (LOC652826), mRNA Length = 1396 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 645 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 704 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 705 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 764 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 765 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 824 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 825 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 884 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 885 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 944 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 945 ggccctgctacggccaggacggctggaccgtaaaattga 983
>gb|AF038965.1| Homo sapiens 26S proteasome ATPase subunit mRNA, complete cds Length = 1439 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 679 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 738 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 739 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 798 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 799 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 858 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 859 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 918 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 919 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 978 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 979 ggccctgctacggccaggacggctggaccgtaaaattga 1017
>gb|AY891402.1| Synthetic construct Homo sapiens clone FLH025948.01L proteasome 26S subunit 4 (PSMC4) mRNA, partial cds Length = 1257 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 657 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 716 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 717 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 776 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 777 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 836 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 837 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 896 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 897 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 956 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 957 ggccctgctacggccaggacggctggaccgtaaaattga 995
>gb|AY891401.1| Synthetic construct Homo sapiens clone FLH025947.01L proteasome 26S subunit 4 (PSMC4) mRNA, partial cds Length = 1257 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 657 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 716 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 717 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 776 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 777 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 836 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 837 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 896 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 897 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 956 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 957 ggccctgctacggccaggacggctggaccgtaaaattga 995
>gb|AY888748.1| Synthetic construct Homo sapiens clone FLH025951.01X proteasome 26S subunit 4 (PSMC4) mRNA, complete cds Length = 1257 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 657 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 716 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 717 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 776 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 777 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 836 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 837 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 896 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 897 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 956 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 957 ggccctgctacggccaggacggctggaccgtaaaattga 995
>gb|U27515.1|HSU27515 Human MIP224 (MIP224) mRNA, complete cds Length = 1425 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 669 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 728 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 729 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 788 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 789 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 848 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 849 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 908 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 909 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 968 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 969 ggccctgctacggccaggacggctggaccgtaaaattga 1007
>gb|AF020736.1|AF020736 Homo sapiens ATPase homolog mRNA, complete cds Length = 1463 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 697 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 756 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 757 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 816 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 817 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 876 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 877 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 936 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 937 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 996 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 997 ggccctgctacggccaggacggctggaccgtaaaattga 1035
>gb|BC018811.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant 1, mRNA (cDNA clone IMAGE:2961362) Length = 1426 Score = 117 bits (59), Expect = 4e-23 Identities = 269/339 (79%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 677 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 736 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 737 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 796 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 797 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 856 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 857 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 916 Query: 242 tgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| || ||||| ||||| || ||||| || || | ||||| || || ||||| Sbjct: 917 tgatcagaatgtcaatgtcaaggtaatcatggccacaaacagagcagacaccctggatcc 976 Query: 302 tgctctgctgcgtccaggaagactggacaggaaaattga 340 || ||||| || |||||| | |||||| | |||||||| Sbjct: 977 ggccctgctacggccaggacggctggaccgtaaaattga 1015
>emb|CR611800.1| full-length cDNA clone CS0DF038YP01 of Fetal brain of Homo sapiens (human) Length = 1532 Score = 113 bits (57), Expect = 7e-22 Identities = 213/265 (80%) Strand = Plus / Plus Query: 2 ggcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||||||| || ||||| || ||| | || || || || |||||||| |||||||| Sbjct: 690 ggcacatcacacaacagctgcattcatccgggtcgtgggctcggagtttgtacagaagta 749 Query: 62 cctgggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgcccc 121 |||||||||||||| | ||||| || ||||| |||||| | || || |||||||| || Sbjct: 750 tctgggtgagggcccccgcatggtccgggatgtgttccgcctggccaaggagaatgcacc 809 Query: 122 ggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagac 181 || || || ||||| || ||| ||||||| || ||||| |||||||||||||||| Sbjct: 810 tgccatcatcttcatagacgagattgatgccatcgccaccaagagattcgatgctcagac 869 Query: 182 cggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatt 241 ||||| ||| | || |||||| | || ||| |||| || |||||||||||||||||||| Sbjct: 870 aggggccgacagggaggttcagaggatcctgctggagctgctgaatcagatggatggatt 929 Query: 242 tgatcagacagtgaatgtgaaggtt 266 |||||||| || ||||| |||||| Sbjct: 930 tgatcagaatgtcaatgtcaaggtt 954
>gb|BC055215.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:63709 IMAGE:2601666), complete cds Length = 1630 Score = 107 bits (54), Expect = 4e-20 Identities = 240/302 (79%) Strand = Plus / Plus Query: 45 gagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgctta 104 ||||||||||||||||| || |||||||| ||| | ||||| |||||||| || || | Sbjct: 715 gagtttgtgcagaagtatcttggtgagggtccacgcatggtgcgagatgtctttcggctg 774 Query: 105 gctaaagagaatgccccggctataatattcattgatgaggttgatgctatagccactgct 164 || ||||||||||| || || || || |||||||||||| | ||||| || || || Sbjct: 775 gccaaagagaatgcaccagccatcatcttcattgatgagatcgatgccattgctacgaag 834 Query: 165 cgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactg 224 || || ||||| ||||| || |||||| ||||||| ||| | || ||| | || || || Sbjct: 835 cgttttgatgcacagactggagctgacagagaagtacagagaatcctgcttgagcttctc 894 Query: 225 aatcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgg 284 ||||| |||||||| |||||||||| ||||| ||||||||||| ||||| ||||| || Sbjct: 895 aatcaaatggatgggtttgatcagaatgtgaacgtgaaggttatcatggccaccaacagg 954 Query: 285 gcagatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttc 344 || || || || || ||||| |||||| ||||||| ||| ||||| | || ||||||||| Sbjct: 955 gctgacacactggaccctgccctgctgtgtccaggtagattggaccgtaagattgagttc 1014 Query: 345 cc 346 || Sbjct: 1015 cc 1016
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 107 bits (54), Expect = 4e-20 Identities = 129/154 (83%) Strand = Plus / Plus Query: 229 agatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcag 288 |||||||||||||||| ||||| |||||||| ||||| ||||||||||| || |||||| Sbjct: 43423 agatggatggatttgaccagaccgtgaatgtcaaggtcataatggcaacaaacagggcag 43482 Query: 289 atactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccctc 348 | ||||||||||||||||| | ||||| |||||||| || | || ||||||||||| | Sbjct: 43483 acactctagatcctgctctcttacgtcctggaagacttgatcgtaagattgagttccccc 43542 Query: 349 tgccggatcggaggcagaagaggcttgttttcca 382 | || ||| | | || ||||||||||||||||| Sbjct: 43543 ttcctgatagacgtcaaaagaggcttgttttcca 43576 Score = 60.0 bits (30), Expect = 9e-06 Identities = 120/150 (80%) Strand = Plus / Plus Query: 81 atggttcgagatgtattccgcttagctaaagagaatgccccggctataatattcattgat 140 |||||||| ||||| ||||| | || || || ||||| || ||||| || ||||||||| Sbjct: 43175 atggttcgtgatgtcttccgtcttgccaaggaaaatgctccagctatcatcttcattgat 43234 Query: 141 gaggttgatgctatagccactgctcgattcgatgctcagaccggggctgaccgagaagtt 200 ||||| ||||| || || |||||| | || |||||||| || || || || | |||||| Sbjct: 43235 gaggtagatgccatcgctactgctaggtttgatgctcaaacaggagccgatagggaagtt 43294 Query: 201 cagcgtattctgatggaactactgaatcag 230 ||||||||||| ||||| || || |||||| Sbjct: 43295 cagcgtattctcatggagcttcttaatcag 43324 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 477 atttgccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctccccaag 536 ||||||||||||||||| |||||||| || || || || | ||||| || || || ||| Sbjct: 44119 atttgccaggaagctggtatgcatgcggtgcgaaagaacagatatgtgatactacctaag 44178 Query: 537 gacttcgagaagggttaccgaaccaatgtcaagaagcc 574 || ||||||||||| ||||| | ||||| |||||||| Sbjct: 44179 gatttcgagaagggctaccgcgcaaatgttaagaagcc 44216 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 411 gatgaggttgatttggaagattatgtctccagacctgataaaatcagtgctgctga 466 ||||||||||| |||||||| ||||| || | ||||||||||| || |||||||| Sbjct: 43730 gatgaggttgacttggaagactatgtttcacggcctgataaaattagcgctgctga 43785
>ref|NM_199750.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 4 (psmc4), mRNA Length = 1630 Score = 107 bits (54), Expect = 4e-20 Identities = 240/302 (79%) Strand = Plus / Plus Query: 45 gagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgctta 104 ||||||||||||||||| || |||||||| ||| | ||||| |||||||| || || | Sbjct: 715 gagtttgtgcagaagtatcttggtgagggtccacgcatggtgcgagatgtctttcggctg 774 Query: 105 gctaaagagaatgccccggctataatattcattgatgaggttgatgctatagccactgct 164 || ||||||||||| || || || || |||||||||||| | ||||| || || || Sbjct: 775 gccaaagagaatgcaccagccatcatcttcattgatgagatcgatgccattgctacgaag 834 Query: 165 cgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactg 224 || || ||||| ||||| || |||||| ||||||| ||| | || ||| | || || || Sbjct: 835 cgttttgatgcacagactggagctgacagagaagtacagagaatcctgcttgagcttctc 894 Query: 225 aatcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgg 284 ||||| |||||||| |||||||||| ||||| ||||||||||| ||||| ||||| || Sbjct: 895 aatcaaatggatgggtttgatcagaatgtgaacgtgaaggttatcatggccaccaacagg 954 Query: 285 gcagatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttc 344 || || || || || ||||| |||||| ||||||| ||| ||||| | || ||||||||| Sbjct: 955 gctgacacactggaccctgccctgctgtgtccaggtagattggaccgtaagattgagttc 1014 Query: 345 cc 346 || Sbjct: 1015 cc 1016
>gb|AY431597.1| Aedes aegypti ASAP ID: 36999 proteasome regulatory particle subunit mRNA sequence Length = 1252 Score = 101 bits (51), Expect = 3e-18 Identities = 264/335 (78%) Strand = Plus / Plus Query: 24 tttatcagagtggttggttcagagtttgtgcagaagtacctgggtgagggcccaaggatg 83 ||||| ||||| ||||| || |||||||| ||||| || ||||| || || || | ||| Sbjct: 685 tttattagagttgttggctccgagtttgtccagaaatatctgggcgaaggtcctcgtatg 744 Query: 84 gttcgagatgtattccgcttagctaaagagaatgccccggctataatattcattgatgag 143 || || ||||||||||| || || ||||| ||| |||| |||||||| ||||||||||| Sbjct: 745 gtgcgtgatgtattccgtttggcaaaagaaaattccccagctataattttcattgatgaa 804 Query: 144 gttgatgctatagccactgctcgattcgatgctcagaccggggctgaccgagaagttcag 203 | || || || |||||| || ||||||||||| || || || ||| | ||||| || Sbjct: 805 atcgacgcaattgccactaagcgtttcgatgctcaaactggcgccgacagggaagtgcaa 864 Query: 204 cgtattctgatggaactactgaatcagatggatggatttgatcagacagtgaatgtgaag 263 ||||| || ||||| || ||||||| ||||| ||||||||||| || || || || Sbjct: 865 cgtatcctactggaattattgaatcaaatggacggatttgatcaaacgaccaacgttaaa 924 Query: 264 gttataatggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaaga 323 ||||| ||||| |||||||| || ||||| |||||||| || ||||||||||||||| | Sbjct: 925 gttatcatggctaccaatcgtgctgatacactagatcccgcactgctgcgtccaggacgt 984 Query: 324 ctggacaggaaaattgagttccctctgccggatcg 358 |||| |||||||| || || ||| |||| ||||| Sbjct: 985 ttggataggaaaatcgaatttcctttgcccgatcg 1019 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 468 atcactgctatttgccaggaagctggcatgcatgctgtccgcaaaaatcggta 520 |||| ||| ||||| ||||||||||||||||| ||||| ||| ||||| |||| Sbjct: 1129 atcaatgcaatttgtcaggaagctggcatgcacgctgtgcgcgaaaataggta 1181
>dbj|AK174288.1| Ciona intestinalis cDNA, clone:cicl025a20, full insert sequence Length = 1481 Score = 99.6 bits (50), Expect = 1e-17 Identities = 266/338 (78%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgag 90 |||| ||||| ||||| || |||||||| || |||||||| || ||||||||||| || | Sbjct: 734 gagtcgttggatcagaattcgtgcagaaatatctgggtgaaggaccaaggatggtacggg 793 Query: 91 atgtattccgcttagctaaagagaatgccccggctataatattcattgatgaggttgatg 150 |||||||| | | || |||||||| |||| || || || ||||||||||| | |||| Sbjct: 794 atgtattcagacttgccaaagagaactcccctgccattatcttcattgatgaaatagatg 853 Query: 151 ctatagccactgctcgattcgatgctcagaccggggctgaccgagaagttcagcgtattc 210 | || ||||| || || || ||||| || || || || || || || || ||||| Sbjct: 854 cgatcgccacgaagcgttttgacgctcaaactggtgcagatcgtgaggtgcaacgtatct 913 Query: 211 tgatggaactactgaatcagatggatggatttgatcagacagtgaatgtgaaggttataa 270 || |||||||||| || ||||||||||| || ||||| || || ||||| |||||||| | Sbjct: 914 tgctggaactacttaaccagatggatggcttcgatcaaactgttaatgttaaggttatta 973 Query: 271 tggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaagactggaca 330 |||| ||||| || || || || || |||||||||||||||||||| || | ||||| Sbjct: 974 tggccaccaaccgagctgacacgctcgatcctgctctgctgcgtcctggtcgtctggatc 1033 Query: 331 ggaaaattgagttccctctgccggatcggaggcagaag 368 |||| ||||| ||||| || ||||||||||| |||||| Sbjct: 1034 ggaagattgaattcccgcttccggatcggagacagaag 1071 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 396 aagatgaacttgagtgatgaggttgatttggaagattatgtctccagacctgataaaatc 455 ||||||||| | || ||||| || ||||||||||||||||| |||||||||| |||||| Sbjct: 1099 aagatgaacctcagcgatgaagtggatttggaagattatgttgccagacctgacaaaatc 1158 Query: 456 agtgctgctgatatcactgctatttgccaggaagctggcatgcatgctgtccgcaaaaat 515 | || ||||||||| | ||| |||||||| ||||| ||||||| ||| || || |||| Sbjct: 1159 actggtgctgatataaatgcaatttgccaagaagcaggcatgcttgcagttcgtgaaaac 1218 Query: 516 cggtatgt 523 |||||||| Sbjct: 1219 cggtatgt 1226
>ref|XM_512659.1| PREDICTED: Pan troglodytes similar to proteasome 26S ATPase subunit 4 isoform 2; protease 26S subunit 6; Tat-binding protein 7; MB67 interacting protein (LOC456032), mRNA Length = 1506 Score = 97.6 bits (49), Expect = 4e-17 Identities = 166/205 (80%) Strand = Plus / Plus Query: 45 gagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgctta 104 |||||||| |||||||| || ||||||||||| | ||||| || ||||| |||||| | Sbjct: 1174 gagtttgtacagaagtatctaggtgagggcccccgcatggtccgggatgtgttccgcctg 1233 Query: 105 gctaaagagaatgccccggctataatattcattgatgaggttgatgctatagccactgct 164 || || |||||||| || || || || ||||| || ||| ||||||| || ||||| Sbjct: 1234 gccaaggagaatgcacctgccatcatcttcatagacgagattgatgccattgccaccaag 1293 Query: 165 cgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactg 224 |||||||||||||||| ||||| ||| | || |||||| | || ||| |||| || ||| Sbjct: 1294 agattcgatgctcagacaggggccgacagggaggttcagaggatcctgctggagctgctg 1353 Query: 225 aatcagatggatggatttgatcaga 249 ||||||||||||||||||||||||| Sbjct: 1354 aatcagatggatggatttgatcaga 1378
>ref|XM_861938.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7), transcript variant 3 (LOC476459), mRNA Length = 1455 Score = 97.6 bits (49), Expect = 4e-17 Identities = 214/269 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 |||||||| || ||||| |||||| | || || || ||||||||||| |||||||||||| Sbjct: 735 catcacacgacagctgcatttatccgggtcgtgggctcagagtttgtccagaagtacctg 794 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 || |||||||| | ||||| || || || |||||| | || || |||||||| || ||| Sbjct: 795 ggcgagggccctcgcatggtccgggacgtgttccgcctggccaaggagaatgcacctgct 854 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || || ||||| |||||| | ||||| || ||||| |||| ||||| ||||| || Sbjct: 855 atcatcttcatagatgagatcgatgccattgccaccaagagatttgatgcccagacagga 914 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 |||||| | || |||||| | || ||| |||| ||||||||||| |||||||||||||| Sbjct: 915 gctgacagggaggttcagagaatcctgctggagctactgaatcaaatggatggatttgac 974 Query: 246 cagacagtgaatgtgaaggttataatggc 274 |||| || ||||| ||||| || ||||| Sbjct: 975 cagaacgttaatgtcaaggtgatcatggc 1003
>ref|XM_861928.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7), transcript variant 2 (LOC476459), mRNA Length = 1307 Score = 97.6 bits (49), Expect = 4e-17 Identities = 214/269 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 |||||||| || ||||| |||||| | || || || ||||||||||| |||||||||||| Sbjct: 587 catcacacgacagctgcatttatccgggtcgtgggctcagagtttgtccagaagtacctg 646 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 || |||||||| | ||||| || || || |||||| | || || |||||||| || ||| Sbjct: 647 ggcgagggccctcgcatggtccgggacgtgttccgcctggccaaggagaatgcacctgct 706 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || || ||||| |||||| | ||||| || ||||| |||| ||||| ||||| || Sbjct: 707 atcatcttcatagatgagatcgatgccattgccaccaagagatttgatgcccagacagga 766 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 |||||| | || |||||| | || ||| |||| ||||||||||| |||||||||||||| Sbjct: 767 gctgacagggaggttcagagaatcctgctggagctactgaatcaaatggatggatttgac 826 Query: 246 cagacagtgaatgtgaaggttataatggc 274 |||| || ||||| ||||| || ||||| Sbjct: 827 cagaacgttaatgtcaaggtgatcatggc 855
>ref|XM_533670.2| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7), transcript variant 1 (LOC476459), mRNA Length = 1411 Score = 97.6 bits (49), Expect = 4e-17 Identities = 214/269 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 |||||||| || ||||| |||||| | || || || ||||||||||| |||||||||||| Sbjct: 691 catcacacgacagctgcatttatccgggtcgtgggctcagagtttgtccagaagtacctg 750 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 || |||||||| | ||||| || || || |||||| | || || |||||||| || ||| Sbjct: 751 ggcgagggccctcgcatggtccgggacgtgttccgcctggccaaggagaatgcacctgct 810 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || || ||||| |||||| | ||||| || ||||| |||| ||||| ||||| || Sbjct: 811 atcatcttcatagatgagatcgatgccattgccaccaagagatttgatgcccagacagga 870 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 |||||| | || |||||| | || ||| |||| ||||||||||| |||||||||||||| Sbjct: 871 gctgacagggaggttcagagaatcctgctggagctactgaatcaaatggatggatttgac 930 Query: 246 cagacagtgaatgtgaaggttataatggc 274 |||| || ||||| ||||| || ||||| Sbjct: 931 cagaacgttaatgtcaaggtgatcatggc 959
>gb|AC158220.4| Mus musculus chromosome 7, clone RP23-278M8, complete sequence Length = 189304 Score = 93.7 bits (47), Expect = 6e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 18 gctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgggtgagggccca 77 ||||| |||||| | ||||| || || |||||||| ||||||||||||||||||||||| Sbjct: 118452 gctgcatttatccgtgtggtgggctcggagtttgttcagaagtacctgggtgagggcccc 118511 Query: 78 aggatggttcgagatgtattccgcttagctaaagagaatgccccggctataatattcatt 137 ||||||| || ||||| |||||| ||||||| |||||||| || || || || ||||| Sbjct: 118512 cggatggtccgggatgtgttccgcctagctaaggagaatgcacctgccatcatcttcata 118571 Query: 138 gatgaggttgatgctatagccac 160 ||||| ||||||| || ||||| Sbjct: 118572 gatgaaattgatgccattgccac 118594 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 214 tggaactactgaatcagatggatggatttgatcagacagtgaatgtgaaggtt 266 |||||||||||||||| |||||||||||||| |||| || |||||||||||| Sbjct: 118730 tggaactactgaatcaaatggatggatttgaccagaacgtcaatgtgaaggtt 118782
>gb|AY112326.1| Zea mays CL40761_1 mRNA sequence Length = 1098 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 389 tactgctaagatgaacttgagtgatgaggttgatttggaagattatgtctccagacctga 448 ||||||||||||| | ||||||||||||| |||||||||||||||||| | |||||| || Sbjct: 653 tactgctaagatggatttgagtgatgaggctgatttggaagattatgtttgcagaccgga 594 Query: 449 taaaatcagtgctgctgat 467 ||| ||||||||| ||||| Sbjct: 593 taagatcagtgctactgat 575
>dbj|AB040869.2| Mus musculus TBP7/PSMC4 gene for proteasomal ATPase, complete cds Length = 2371 Score = 91.7 bits (46), Expect = 3e-15 Identities = 118/142 (83%) Strand = Plus / Plus Query: 19 ctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgggtgagggcccaa 78 |||| |||||| | ||||| || || |||||||| ||||||||||||||||||||||| Sbjct: 1299 ctgcatttatccgtgtggtgggctcggagtttgttcagaagtacctgggtgagggccccc 1358 Query: 79 ggatggttcgagatgtattccgcttagctaaagagaatgccccggctataatattcattg 138 ||||||| || ||||| |||||| ||||||| |||||||| || || || || ||||| | Sbjct: 1359 ggatggtccgggatgtgttccgcctagctaaggagaatgcacctgccatcatcttcatag 1418 Query: 139 atgaggttgatgctatagccac 160 |||| ||||||| || ||||| Sbjct: 1419 atgaaattgatgccattgccac 1440 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 tggaactactgaatcagatggatggatttgatcagacagtgaatgtgaag 263 |||| ||||||||||| |||||||||||||| |||| || ||||||||| Sbjct: 1594 tggagctactgaatcaaatggatggatttgaccagaacgtcaatgtgaag 1643
>ref|XM_861948.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7), transcript variant 4 (LOC476459), mRNA Length = 1413 Score = 89.7 bits (45), Expect = 1e-14 Identities = 186/233 (79%) Strand = Plus / Plus Query: 42 tcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgc 101 ||||||||||| |||||||||||||| |||||||| | ||||| || || || |||||| Sbjct: 729 tcagagtttgtccagaagtacctgggcgagggccctcgcatggtccgggacgtgttccgc 788 Query: 102 ttagctaaagagaatgccccggctataatattcattgatgaggttgatgctatagccact 161 | || || |||||||| || ||||| || ||||| |||||| | ||||| || ||||| Sbjct: 789 ctggccaaggagaatgcacctgctatcatcttcatagatgagatcgatgccattgccacc 848 Query: 162 gctcgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaacta 221 |||| ||||| ||||| || |||||| | || |||||| | || ||| |||| ||| Sbjct: 849 aagagatttgatgcccagacaggagctgacagggaggttcagagaatcctgctggagcta 908 Query: 222 ctgaatcagatggatggatttgatcagacagtgaatgtgaaggttataatggc 274 |||||||| |||||||||||||| |||| || ||||| ||||| || ||||| Sbjct: 909 ctgaatcaaatggatggatttgaccagaacgttaatgtcaaggtgatcatggc 961
>gb|AY609898.1| Sus scrofa clone Clu_40992.scr.msk.p1.Contig1, mRNA sequence Length = 1412 Score = 85.7 bits (43), Expect = 2e-13 Identities = 247/315 (78%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 |||||||| || ||||| || ||| |||| || || ||||||||||| |||||||||||| Sbjct: 701 catcacacgacagctgcattcatccgagtcgtgggctcagagtttgtacagaagtacctg 760 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||||||||| | ||||| || ||||| |||||| | || || ||||| || || || Sbjct: 761 ggtgagggccctcgcatggtccgggatgtgttccgcctggccaaggagaacgcacctgcc 820 Query: 126 ataatattcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggg 185 || || ||||| |||||| | ||||| || ||||| |||| ||||| ||||| ||| Sbjct: 821 atcatcttcatagatgagatcgatgccattgccaccaagagatttgatgcccagacaggg 880 Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 |||||| | || |||||| | || ||| |||| ||||| ||||| |||||||| || || Sbjct: 881 gctgacagggaggttcagagaatcctgctggagctactcaatcaaatggatgggttcgac 940 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgct 305 || | || ||||| ||||| || ||||| || || | ||||| || || |||||||| Sbjct: 941 caaaatgtcaatgtcaaggtgatcatggccacaaacagagcagacaccctggatcctgcc 1000 Query: 306 ctgctgcgtccagga 320 |||||||| |||||| Sbjct: 1001 ctgctgcggccagga 1015 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 414 gaggttgatttggaagattatgt 436 ||||||||||||||||||||||| Sbjct: 1109 gaggttgatttggaagattatgt 1131
>ref|XM_452488.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C06534g predicted mRNA Length = 1287 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||||||||| ||| |||| || ||||| || ||||| |||| || |||| | | Sbjct: 844 ttcgatgctcagacagggtctgatcgtgaagtccaacgtatattgattgagttacttact 903 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 || |||||||| ||||||||| || ||||| || |||||||||||||||||||| || Sbjct: 904 caaatggatggttttgatcagtcaacaaatgttaaagttataatggcaaccaatcgtgct 963 Query: 288 gatactctagatcc 301 |||||||||||||| Sbjct: 964 gatactctagatcc 977 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 42 tcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgt 94 |||||||||||||| || ||| | ||||| || ||||| |||||| ||||||| Sbjct: 718 tcagagtttgtgcataaatacttaggtgaagggccaagaatggttagagatgt 770
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||||||||| ||| |||| || ||||| || ||||| |||| || |||| | | Sbjct: 573062 ttcgatgctcagacagggtctgatcgtgaagtccaacgtatattgattgagttacttact 573121 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 || |||||||| ||||||||| || ||||| || |||||||||||||||||||| || Sbjct: 573122 caaatggatggttttgatcagtcaacaaatgttaaagttataatggcaaccaatcgtgct 573181 Query: 288 gatactctagatcc 301 |||||||||||||| Sbjct: 573182 gatactctagatcc 573195 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 42 tcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgt 94 |||||||||||||| || ||| | ||||| || ||||| |||||| ||||||| Sbjct: 572936 tcagagtttgtgcataaatacttaggtgaagggccaagaatggttagagatgt 572988
>ref|XM_679369.1| PREDICTED: Danio rerio similar to B4galt3-prov protein (LOC556544), mRNA Length = 4364 Score = 83.8 bits (42), Expect = 6e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 225 aatcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgg 284 ||||| |||||||| |||||||||| ||||| ||||||||||| ||||| ||||| || Sbjct: 1069 aatcaaatggatgggtttgatcagaatgtgaacgtgaaggttatcatggccaccaacagg 1128 Query: 285 gcagatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttc 344 || || || || || ||||| |||||||||||||| ||| ||||| | || ||||||||| Sbjct: 1129 gctgacacactggaccctgccctgctgcgtccaggtagattggaccgtaagattgagttc 1188 Query: 345 cc 346 || Sbjct: 1189 cc 1190
>gb|AC147002.20| Medicago truncatula clone mth2-151m16, complete sequence Length = 128621 Score = 79.8 bits (40), Expect = 1e-11 Identities = 121/148 (81%) Strand = Plus / Minus Query: 229 agatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcag 288 ||||||| || ||||| ||||| |||||||| || || ||||||||||| ||||| |||| Sbjct: 7538 agatggacggttttgaccagaccgtgaatgttaaagtcataatggcaacaaatcgtgcag 7479 Query: 289 atactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccctc 348 | ||| | |||||||| || ||||||| |||||||| || | ||||||||||||||| Sbjct: 7478 acactttggatcctgccctcttgcgtcctggaagacttgatcgcaaaattgagttccctt 7419 Query: 349 tgccggatcggaggcagaagaggcttgt 376 |||| ||| | | || ||||||||||| Sbjct: 7418 tgcctgatagacgccaaaagaggcttgt 7391 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 79 ggatggttcgagatgtattccgcttagctaaagagaatgccccggctataatattcattg 138 |||||||||| ||||| || || | || ||||| || ||||| || || ||||| || | Sbjct: 7880 ggatggttcgtgatgtgtttcgtcttgcaaaagaaaacgcccctgcaattatatttatcg 7821 Query: 139 atgaggttgatgctatagccactgctcgattcgatgctcagaccggggctgaccgagaag 198 ||||||||||||| ||||| |||||| |||| ||||| || || || ||||| |||||| Sbjct: 7820 atgaggttgatgcgatagctactgctagatttgatgcccaaacaggagctgatagagaag 7761 Query: 199 ttcagcgtattctgatggaactactgaatcag 230 | |||||||| || |||||||| |||||||| Sbjct: 7760 tacagcgtatcctcatggaacttttgaatcag 7729 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 15 actgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 ||||||||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 9483 actgctgctttcatcagggttgttggatctgagtttgtgcagaagta 9437 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 399 atgaacttgagtgatgaggttgatttggaagattatgtctccagacctgataaaatcagt 458 ||||| ||||||||||| || || ||||||||||||| ||| | ||||| ||||| ||| Sbjct: 6385 atgaatttgagtgatgaagtggacctggaagattatgtttcccgccctgacaaaattagt 6326 Query: 459 gctgc 463 ||||| Sbjct: 6325 gctgc 6321 Score = 46.1 bits (23), Expect = 0.13 Identities = 83/103 (80%) Strand = Plus / Minus Query: 472 ctgctatttgccaggaagctggcatgcatgctgtccgcaaaaatcggtatgttatcctcc 531 |||||||||| || ||||| || ||||||||||| || || ||| | ||||| || || | Sbjct: 5707 ctgctatttgtcaagaagcaggaatgcatgctgttcgtaagaatagatatgtcatactac 5648 Query: 532 ccaaggacttcgagaagggttaccgaaccaatgtcaagaagcc 574 | |||||||| ||||| ||||| | ||||| || |||||||| Sbjct: 5647 caaaggactttgagaaaggttataggaccaacgtgaagaagcc 5605
>emb|BX049202.1|CNS09A4M Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24DH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 498 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Minus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || || || || || |||||||||||| | || || || || Sbjct: 386 ttcgatgcgcagaccggtgccgatcgggaggtgcagcgtattctgctcgagctgctcaac 327 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| || |||||||| ||| |||||||| || ||||| || || ||||| Sbjct: 326 cagatggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccgggcc 267 Query: 288 gatactctagatcctgctctgctgcgtcc 316 ||||| || ||||| |||||||||||||| Sbjct: 266 gatacgctcgatccggctctgctgcgtcc 238
>emb|BX009899.1|CNS08FSV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15DH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 367 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Minus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || || || || || |||||||||||| | || || || || Sbjct: 320 ttcgatgcgcagaccggtgccgatcgggaggtgcagcgtattctgctcgagctgctcaac 261 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| || |||||||| ||| |||||||| || ||||| || || ||||| Sbjct: 260 cagatggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccgggcc 201 Query: 288 gatactctagatcctgctctgctgcgtcc 316 ||||| || ||||| |||||||||||||| Sbjct: 200 gatacgctcgatccggctctgctgcgtcc 172
>ref|XM_393513.2| PREDICTED: Apis mellifera similar to DEAD-box ATPase (LOC410026), mRNA Length = 1399 Score = 73.8 bits (37), Expect = 6e-10 Identities = 229/293 (78%) Strand = Plus / Plus Query: 12 actactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgggtgag 71 ||||||||||| ||||| | || || || ||||| ||||| ||||| || | ||||| Sbjct: 705 actactgctgcatttattcgtgtagtaggatcagaatttgtacagaaatatttaggtgaa 764 Query: 72 ggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggctataata 131 || ||||| ||||| ||||||| ||||| ||||||||||| ||| | || |||||||| Sbjct: 765 gggccaagaatggtgagagatgtcttccgtttagctaaagaaaattcaccagctataatt 824 Query: 132 ttcattgatgaggttgatgctatagccactgctcgattcgatgctcagaccggggctgac 191 || ||||||| | ||||||||||| || |||| || |||||||| || ||||| Sbjct: 825 tttgttgatgaaatcgatgctatagctacaaaaagatttgacgctcagactggtgctgat 884 Query: 192 cgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgatcagaca 251 || ||||| || |||||||| ||||| | || ||||| |||||||| |||||||| || Sbjct: 885 cgtgaagtgcaacgtattcttttggaattgcttaatcaaatggatggttttgatcaaact 944 Query: 252 gtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgc 304 ||||| || |||||||||||||| ||| | || ||||| |||||||||| Sbjct: 945 actaatgttaaagttataatggcaacgaatagagctgatacattagatcctgc 997
>gb|AY809946.1| Schistosoma japonicum clone SJCHGC01629 unknown mRNA Length = 590 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 165 cgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactg 224 ||||| |||||||| || || |||||||| ||||| ||||||||| || | ||||| || Sbjct: 55 cgatttgatgctcaaactggagctgaccgtgaagtacagcgtattttgttagaactgttg 114 Query: 225 aatcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgg 284 || || ||||||||||| || |||| || || || |||||||| ||||| |||||||| Sbjct: 115 aaccaaatggatggattcgaccagaatgtcaacgtaaaggttatcatggctaccaatcgt 174 Query: 285 gcagatactctagatcc 301 || || ||||||||||| Sbjct: 175 gctgacactctagatcc 191
>ref|XM_631330.1| Dictyostelium discoideum HIV1 TAT-binding protein (DDB0191435), partial mRNA Length = 1212 Score = 69.9 bits (35), Expect = 9e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 ||||| || |||||||| |||||||| |||||| || ||||||| |||||||| |||||| Sbjct: 796 gctgatcgtgaagttcaacgtattcttatggaattattgaatcaaatggatggttttgat 855 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgc 304 | || ||||| ||||| || |||||||||||||| ||||||| |||||||||| Sbjct: 856 gtatctgtaaatgtaaaggtaattatggcaaccaatcgtcaagatactttagatcctgc 914
>ref|XM_962883.1| PREDICTED: Tribolium castaneum similar to CG16916-PA (LOC656344), mRNA Length = 1230 Score = 69.9 bits (35), Expect = 9e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 9 cacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgggt 68 ||||| |||||||| || |||||||| || || || ||||| || ||||||||||| || Sbjct: 637 cacaccactgctgcgttcatcagagttgtggggtcggagttcgtccagaagtacctaggg 696 Query: 69 gagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggctata 128 ||||| || ||||||||||| || || ||||| | ||||| |||||| | || ||||| Sbjct: 697 gaggggcctaggatggttcgggacgtgttccgactggctaaggagaattcaccagctatt 756 Query: 129 atattcattgatgaggttgatgc 151 || |||||||| ||| ||||||| Sbjct: 757 atcttcattgacgagattgatgc 779
>gb|L16578.1|DDITATBPA Dictyostelium discoideum HIV1 TAT-binding protein homologous protein mRNA, complete cds Length = 1383 Score = 69.9 bits (35), Expect = 9e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 ||||| || |||||||| |||||||| |||||| || ||||||| |||||||| |||||| Sbjct: 966 gctgatcgtgaagttcaacgtattcttatggaattattgaatcaaatggatggttttgat 1025 Query: 246 cagacagtgaatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgc 304 | || ||||| ||||| || |||||||||||||| ||||||| |||||||||| Sbjct: 1026 gtatctgtaaatgtaaaggtaattatggcaaccaatcgtcaagatactttagatcctgc 1084
>ref|XM_662535.1| Cryptosporidium hominis TU502 26S proteasome AAA-ATPase subunit RPT3 (Chro.40284) partial mRNA Length = 1206 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 389 tactgctaagatgaacttgagtgatgaggttgatttggaagattatgtctccagacctga 448 |||||| ||||||||||||||||| || |||||| | ||||| |||||||||||||| || Sbjct: 990 tactgcaaagatgaacttgagtgaagaagttgatcttgaagaatatgtctccagaccaga 1049 Query: 449 taaaat 454 ||||| Sbjct: 1050 aaaaat 1055 Score = 44.1 bits (22), Expect = 0.53 Identities = 52/62 (83%) Strand = Plus / Plus Query: 24 tttatcagagtggttggttcagagtttgtgcagaagtacctgggtgagggcccaaggatg 83 ||||| ||||| ||||| || |||||||| || || || ||||||| |||||||||||| Sbjct: 625 tttattagagtcgttgggtcggagtttgtacaaaaatatttgggtgaaggcccaaggatg 684 Query: 84 gt 85 || Sbjct: 685 gt 686
>ref|XM_625842.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit 26b like AAA ATpase (cgd4_2540), partial mRNA Length = 1206 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 389 tactgctaagatgaacttgagtgatgaggttgatttggaagattatgtctccagacctga 448 |||||| ||||||||||||||||| || |||||| | ||||| |||||||||||||| || Sbjct: 990 tactgcaaagatgaacttgagtgaagaagttgatcttgaagaatatgtctccagaccaga 1049 Query: 449 taaaat 454 ||||| Sbjct: 1050 aaaaat 1055 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 24 tttatcagagtggttggttcagagtttgtgcagaagtacctgggtgagggcccaaggatg 83 ||||| ||||| ||||| ||||||||||| || || || ||||||| |||||||||||| Sbjct: 625 tttattagagtcgttgggtcagagtttgtacaaaaatatttgggtgaaggcccaaggatg 684 Query: 84 gt 85 || Sbjct: 685 gt 686
>gb|BC012411.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone IMAGE:3501138), complete cds Length = 660 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 214 tggaactactgaatcagatggatggatttgatcagacagtgaatgtgaaggtt 266 |||||||||||||||| |||||||||||||| |||| || |||||||||||| Sbjct: 23 tggaactactgaatcaaatggatggatttgaccagaacgtcaatgtgaaggtt 75
>ref|XM_749387.1| Aspergillus fumigatus Af293 proteasome regulatory particle subunit Rpt3 (Afu3g11390) partial mRNA Length = 1398 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 165 cgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactg 224 ||||||||||| ||||| || || || || |||||||||||||| ||| | || || || Sbjct: 820 cgattcgatgcccagactggtgccgatcgtgaagttcagcgtatcctgcttgagctcctc 879 Query: 225 aatcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgg 284 ||||||||||| || || || |||||| ||||||||||| || ||||| ||||| || Sbjct: 880 aatcagatggacggcttcgaacagacaagcaatgtgaaggtcatcatggccaccaaccga 939 Query: 285 gcagatactctagatcc 301 || |||||||| ||||| Sbjct: 940 gcggatactctggatcc 956
>emb|BX064829.1|CNS09M6P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC48BH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 655 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Minus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || || || || || |||||||||||| | || || || || Sbjct: 560 ttcgatgcgcagaccggtgccgatcgggaggtgcagcgtattctgctcgagctgctcaac 501 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| || |||||||| ||| |||||||| || ||||| || || ||||| Sbjct: 500 cagatggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccgggcc 441 Query: 288 gatactctagatcctgctctgctgcgtcc 316 ||||| || ||||| || ||||||||||| Sbjct: 440 gatacgctcgatccggccctgctgcgtcc 412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 193 aaggacttcgagaagggttac 173
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 45 gagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgctta 104 |||||||| || |||||||| || || || || |||||||| || ||||| |||||||| Sbjct: 1144723 gagtttgttcacaagtaccttggagaaggtcccaggatggtgcgcgatgtcttccgcttg 1144782 Query: 105 gctaaagagaatgccccggctataatattcattgatgaggttgat 149 || | ||||||||||||| | || || ||||||||||| |||||| Sbjct: 1144783 gcgagagagaatgccccgtcgattattttcattgatgaagttgat 1144827
>ref|XM_311871.2| Anopheles gambiae str. PEST ENSANGP00000023984 (ENSANGG00000015165), partial mRNA Length = 1374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || || || || || |||||||||||| | || || || || Sbjct: 811 ttcgatgcgcagaccggtgccgatcgggaggtgcagcgtattctgctcgagctgctcaac 870 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| || |||||||| ||| |||||||| || ||||| || || ||||| Sbjct: 871 cagatggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccgggcc 930 Query: 288 gatactctagatcctgctctgctgcgtcc 316 ||||| || ||||| || ||||||||||| Sbjct: 931 gatacgctcgatccggccctgctgcgtcc 959 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 1177 aaggacttcgagaagggttac 1197
>ref|XM_311870.2| Anopheles gambiae str. PEST ENSANGP00000017654 (ENSANGG00000015165), partial mRNA Length = 1449 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || || || || || |||||||||||| | || || || || Sbjct: 886 ttcgatgcgcagaccggtgccgatcgggaggtgcagcgtattctgctcgagctgctcaac 945 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| || |||||||| ||| |||||||| || ||||| || || ||||| Sbjct: 946 cagatggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccgggcc 1005 Query: 288 gatactctagatcctgctctgctgcgtcc 316 ||||| || ||||| || ||||||||||| Sbjct: 1006 gatacgctcgatccggccctgctgcgtcc 1034 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 1252 aaggacttcgagaagggttac 1272
>ref|NM_211296.1| Eremothecium gossypii AFR394Wp (AFR394W), mRNA Length = 1419 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 45 gagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgctta 104 |||||||| || |||||||| || || || || |||||||| || ||||| |||||||| Sbjct: 838 gagtttgttcacaagtaccttggagaaggtcccaggatggtgcgcgatgtcttccgcttg 897 Query: 105 gctaaagagaatgccccggctataatattcattgatgaggttgat 149 || | ||||||||||||| | || || ||||||||||| |||||| Sbjct: 898 gcgagagagaatgccccgtcgattattttcattgatgaagttgat 942
>ref|XM_390945.1| Gibberella zeae PH-1 chromosome 3 PRS6_ASPNG 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG (FG10769.1) partial mRNA Length = 1266 Score = 63.9 bits (32), Expect = 6e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 165 cgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactg 224 |||||||||||||| || || || ||| ||||||| |||||||||||| | || ||||| Sbjct: 820 cgattcgatgctcaaactggtgccgacagagaagtccagcgtattctgcttgagctactc 879 Query: 225 aatcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgg 284 || ||||||||||| || || ||||| | || || ||||| || ||||| ||||| || Sbjct: 880 aaccagatggatggtttcgaccagactgctaacgtcaaggtcatcatggccaccaaccga 939 Query: 285 gcagatactctagatcctgc 304 || |||||||| || ||||| Sbjct: 940 gctgatactctggaccctgc 959 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgag 90 |||| |||||||| ||||| || ||||| ||||||||||||||||| | ||||| |||| Sbjct: 686 gagttgttggttctgagttcgtccagaaatacctgggtgagggcccccgaatggtccgag 745 Query: 91 atgtattccg 100 |||| ||||| Sbjct: 746 atgttttccg 755
>emb|CR318611.4| Zebrafish DNA sequence from clone DKEY-199F5 in linkage group 16, complete sequence Length = 162349 Score = 63.9 bits (32), Expect = 6e-07 Identities = 98/120 (81%) Strand = Plus / Minus Query: 24 tttatcagagtggttggttcagagtttgtgcagaagtacctgggtgagggcccaaggatg 83 |||||| | ||||| || || ||||||||||||||||| || |||||||| ||| | ||| Sbjct: 59436 tttatccgtgtggtgggatctgagtttgtgcagaagtatcttggtgagggtccacgcatg 59377 Query: 84 gttcgagatgtattccgcttagctaaagagaatgccccggctataatattcattgatgag 143 || |||||||| || || | || ||||||||||| || || || || |||||||||||| Sbjct: 59376 gtgcgagatgtctttcggctggccaaagagaatgcaccagccatcatcttcattgatgag 59317 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 262 aggttataatggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaa 321 ||||||| ||||| ||||| |||| || || || || ||||| |||||||||||||| | Sbjct: 58375 aggttatcatggccaccaacagggctgacacactggaccctgccctgctgcgtccaggta 58316 Query: 322 gactggacaggaaaattgagttccc 346 || ||||| | || ||||||||||| Sbjct: 58315 gattggaccgtaagattgagttccc 58291
>gb|BC102595.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 4, mRNA (cDNA clone MGC:127979 IMAGE:7961736), complete cds Length = 1498 Score = 63.9 bits (32), Expect = 6e-07 Identities = 158/200 (79%) Strand = Plus / Plus Query: 42 tcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgc 101 |||||||| || |||||||||||||| |||||||| | ||||| || || || |||||| Sbjct: 739 tcagagttcgtacagaagtacctgggcgagggccctcgcatggtccgggacgtgttccgc 798 Query: 102 ttagctaaagagaatgccccggctataatattcattgatgaggttgatgctatagccact 161 | || || ||||| || || || || || ||||| |||||| ||||||| || ||||| Sbjct: 799 ctggccaaggagaacgcacctgccatcatcttcatagatgagattgatgccatcgccacc 858 Query: 162 gctcgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaacta 221 |||| ||||| ||||| ||||||||| | || |||||| | || || |||| ||| Sbjct: 859 aagagatttgatgcccagacaggggctgacagggaggttcagagaatcctactggagcta 918 Query: 222 ctgaatcagatggatggatt 241 |||||||| ||||||||||| Sbjct: 919 ctgaatcaaatggatggatt 938
>ref|NM_001035083.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 4 (PSMC4), mRNA Length = 1498 Score = 63.9 bits (32), Expect = 6e-07 Identities = 158/200 (79%) Strand = Plus / Plus Query: 42 tcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgc 101 |||||||| || |||||||||||||| |||||||| | ||||| || || || |||||| Sbjct: 739 tcagagttcgtacagaagtacctgggcgagggccctcgcatggtccgggacgtgttccgc 798 Query: 102 ttagctaaagagaatgccccggctataatattcattgatgaggttgatgctatagccact 161 | || || ||||| || || || || || ||||| |||||| ||||||| || ||||| Sbjct: 799 ctggccaaggagaacgcacctgccatcatcttcatagatgagattgatgccatcgccacc 858 Query: 162 gctcgattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaacta 221 |||| ||||| ||||| ||||||||| | || |||||| | || || |||| ||| Sbjct: 859 aagagatttgatgcccagacaggggctgacagggaggttcagagaatcctactggagcta 918 Query: 222 ctgaatcagatggatggatt 241 |||||||| ||||||||||| Sbjct: 919 ctgaatcaaatggatggatt 938
>ref|XM_502714.1| Yarrowia lipolytica CLIB122, YALI0D11770g predicted mRNA Length = 1215 Score = 61.9 bits (31), Expect = 2e-06 Identities = 142/179 (79%) Strand = Plus / Plus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || ||| |||| || |||||||| ||| |||| || || || Sbjct: 772 ttcgatgcacagaccggtgccgacagagaggtccagcgtatcctgctggagctgctcaac 831 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 |||||||| || || || ||||| || || ||||| || ||||| ||||| || ||| Sbjct: 832 cagatggacggtttcgaccagacctccaacgtcaaggtgatcatggccaccaaccgagca 891 Query: 288 gatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 || || || |||||||||||||||||||| || |||||||| | || || |||||||| Sbjct: 892 gacacactggatcctgctctgctgcgtcccggtcgactggaccgaaagatcgagttccc 950
>emb|CR622224.1| full-length cDNA clone CS0DK006YK15 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 549 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 222 ctgaatcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaat 281 |||||||||||||||||||||||||||| || ||||| ||||| || ||||| || || Sbjct: 37 ctgaatcagatggatggatttgatcagaatgtcaatgtcaaggtaatcatggccacaaac 96 Query: 282 cgggcagatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattga 340 | ||||| || || ||||| || ||||| || |||||| | |||||| | |||||||| Sbjct: 97 agagcagacaccctggatccggccctgctacggccaggacggctggaccgtaaaattga 155
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 61.9 bits (31), Expect = 2e-06 Identities = 142/179 (79%) Strand = Plus / Minus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || ||| |||| || |||||||| ||| |||| || || || Sbjct: 1459828 ttcgatgcacagaccggtgccgacagagaggtccagcgtatcctgctggagctgctcaac 1459769 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 |||||||| || || || ||||| || || ||||| || ||||| ||||| || ||| Sbjct: 1459768 cagatggacggtttcgaccagacctccaacgtcaaggtgatcatggccaccaaccgagca 1459709 Query: 288 gatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccc 346 || || || |||||||||||||||||||| || |||||||| | || || |||||||| Sbjct: 1459708 gacacactggatcctgctctgctgcgtcccggtcgactggaccgaaagatcgagttccc 1459650
>ref|XM_781784.1| PREDICTED: Strongylocentrotus purpuratus similar to proteasome (prosome, macropain) 26S subunit, ATPase, 4 (LOC581800), mRNA Length = 906 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 18 gctgcttttatcagagtggttggttcagagtttgtgcagaagtacctgggtgagggccca 77 |||||||| || |||| ||||||||||||||||| |||||||| || || || |||||| Sbjct: 547 gctgctttcattcgagtcgttggttcagagtttgttcagaagtatctaggagaaggccca 606 Query: 78 aggatggttcgagatgtattccgcttagctaaagagaatgccccggctataatattcatt 137 | ||||| | ||||| ||| | | |||||||||||||| || || || || |||||| Sbjct: 607 cgtatggtgagggatgtgttcagactggctaaagagaatgctcctgcaatcatcttcatt 666 Query: 138 gatgag 143 |||||| Sbjct: 667 gatgag 672
>emb|BX049214.1|CNS09A4Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24DH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 452 Score = 60.0 bits (30), Expect = 9e-06 Identities = 121/150 (80%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || || || || || |||||||||||| | || || || || Sbjct: 309 ttcgatgcgcagaccggtgccgatcgggaggtgcagcgtattctgctcgagctgctcaac 250 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| || |||||||| ||| |||||||| || ||||| || || ||||| Sbjct: 249 cagatggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccgggcc 190 Query: 288 gatactctagatcc-tgctctgctgcgtcc 316 ||||| || ||||| |||||||||||||| Sbjct: 189 gatacgctcgatccaggctctgctgcgtcc 160
>emb|BX031109.1|CNS08W61 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA46BG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 794 Score = 60.0 bits (30), Expect = 9e-06 Identities = 121/150 (80%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| |||||||| || || || || || |||||||||||| | || || || || Sbjct: 565 ttcgatgcgcagaccggtgccgatcgggaggtgcagcgtattctgctcgagctgctcaac 506 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatc-gggc 286 ||||||||||| || |||||||| ||| |||||||| || ||||| || || | |||| Sbjct: 505 cagatggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccggggc 446 Query: 287 agatactctagatcctgctctgctgcgtcc 316 ||||| || ||||| |||||||||||||| Sbjct: 445 cgatacgctcgatccggctctgctgcgtcc 416 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 9 cacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagta 61 |||||||| ||||| ||||| | ||||| ||||| ||||| ||||||||||| Sbjct: 724 cacactacagctgcctttattcgtgtggtcggttccgagttcgtgcagaagta 672 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 198 aaggacttcgagaagggttac 178
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 198 gttcagcgtattctgatggaactactgaatcagatggatggatttgatcagacagtgaat 257 ||||| |||||||| ||||||| || || ||||||||||| ||||| || | ||| Sbjct: 1872671 gttcaacgtattcttctggaactcctcaaccagatggatggttttgagcaatcgagcaat 1872730 Query: 258 gtgaaggttataatggcaaccaatcgggcagatactctagatcctgctctgctgcgtcca 317 || ||||| || ||||| || || ||||| |||||| | ||||||||||||||||||||| Sbjct: 1872731 gttaaggtcattatggctactaaccgggccgatactttggatcctgctctgctgcgtcca 1872790 Query: 318 gg 319 || Sbjct: 1872791 gg 1872792
>gb|AC007842.1|AC007842 Homo sapiens chromosome 19, BAC 331191 (CIT-B-471f3), complete sequence Length = 174009 Score = 60.0 bits (30), Expect = 9e-06 Identities = 114/142 (80%) Strand = Plus / Plus Query: 45 gagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgctta 104 |||||||| |||||||| |||||||||||||| | ||||| || ||||| |||||| | Sbjct: 98085 gagtttgtacagaagtatctgggtgagggcccccgcatggtccgggatgtgttccgcctg 98144 Query: 105 gctaaagagaatgccccggctataatattcattgatgaggttgatgctatagccactgct 164 || || |||||||| || || || || ||||| || ||| ||||||| || ||||| Sbjct: 98145 gccaaggagaatgcacctgccatcatcttcatagacgagattgatgccatcgccaccaag 98204 Query: 165 cgattcgatgctcagaccgggg 186 |||||||||||||||| |||| Sbjct: 98205 agattcgatgctcagacagggg 98226 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 222 ctgaatcagatggatggatttgatcagacagtgaatgtgaaggtt 266 |||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 98347 ctgaatcagatggatggatttgatcagaatgtcaatgtcaaggtt 98391
>emb|BX064588.1|CNS09M00 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC46DG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 522 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| || |||||||| ||| |||||||| || ||||| || || ||||| Sbjct: 500 cagatggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccgggcc 441 Query: 288 gatactctagatcctgctctgctgcgtcc 316 ||||| || ||||| |||||||||||||| Sbjct: 440 gatacgctcgatccggctctgctgcgtcc 412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 194 aaggacttcgagaagggttac 174
>ref|XM_817508.1| Trypanosoma brucei TREU927 protease regulatory ATPase subunit 4 (Tb10.70.3930) partial mRNA Length = 1200 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 189 gaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttga 244 ||||| || |||||||||| || |||||||||||| ||||||||||||| ||||| Sbjct: 775 gaccgcgaggttcagcgtacgctaatggaactactgcatcagatggatggctttga 830
>emb|CR690609.3|CNS0FVTP Tetraodon nigroviridis full-length cDNA Length = 440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| ||| |||| || ||||| |||||||| ||||| || || Sbjct: 179 catcacactacggcggctttcatccgagttgtgggttctgagtttgttcagaaatatttg 238 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||| || || | ||||| || ||||| || || || || ||||| || || || || Sbjct: 239 ggtgaaggtcctcgtatggtccgtgatgtctttcgtttggcaaaagaaaacgcacctgcc 298 Query: 126 ataatattcattgatgaggttgatgctatagccact 161 || ||||||||||||||| ||||||| || |||||| Sbjct: 299 atcatattcattgatgagattgatgccatcgccact 334
>emb|CR685247.2|CNS0FROR Tetraodon nigroviridis full-length cDNA Length = 423 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| ||| |||| || ||||| |||||||| ||||| || || Sbjct: 162 catcacactacggcggctttcatccgagttgtgggttctgagtttgttcagaaatatttg 221 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||| || || | ||||| || ||||| || || || || ||||| || || || || Sbjct: 222 ggtgaaggtcctcgtatggtccgtgatgtctttcgtttggcaaaagaaaacgcacctgcc 281 Query: 126 ataatattcattgatgaggttgatgctatagccact 161 || ||||||||||||||| ||||||| || |||||| Sbjct: 282 atcatattcattgatgagattgatgccatcgccact 317
>emb|CR684460.2|CNS0FR2W Tetraodon nigroviridis full-length cDNA Length = 443 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| ||| |||| || ||||| |||||||| ||||| || || Sbjct: 182 catcacactacggcggctttcatccgagttgtgggttctgagtttgttcagaaatatttg 241 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||| || || | ||||| || ||||| || || || || ||||| || || || || Sbjct: 242 ggtgaaggtcctcgtatggtccgtgatgtctttcgtttggcaaaagaaaacgcacctgcc 301 Query: 126 ataatattcattgatgaggttgatgctatagccact 161 || ||||||||||||||| ||||||| || |||||| Sbjct: 302 atcatattcattgatgagattgatgccatcgccact 337
>emb|CR675713.2|CNS0FKCN Tetraodon nigroviridis full-length cDNA Length = 440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| ||| |||| || ||||| |||||||| ||||| || || Sbjct: 179 catcacactacggcggctttcatccgagttgtgggttctgagtttgttcagaaatatttg 238 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||| || || | ||||| || ||||| || || || || ||||| || || || || Sbjct: 239 ggtgaaggtcctcgtatggtccgtgatgtctttcgtttggcaaaagaaaacgcacctgcc 298 Query: 126 ataatattcattgatgaggttgatgctatagccact 161 || ||||||||||||||| ||||||| || |||||| Sbjct: 299 atcatattcattgatgagattgatgccatcgccact 334
>emb|CR671862.3|CNS0FHDO Tetraodon nigroviridis full-length cDNA Length = 440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| ||| |||| || ||||| |||||||| ||||| || || Sbjct: 179 catcacactacggcggctttcatccgagttgtgggttctgagtttgttcagaaatatttg 238 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||| || || | ||||| || ||||| || || || || ||||| || || || || Sbjct: 239 ggtgaaggtcctcgtatggtccgtgatgtctttcgtttggcaaaagaaaacgcacctgcc 298 Query: 126 ataatattcattgatgaggttgatgctatagccact 161 || ||||||||||||||| ||||||| || |||||| Sbjct: 299 atcatattcattgatgagattgatgccatcgccact 334
>emb|CR671048.2|CNS0FGR2 Tetraodon nigroviridis full-length cDNA Length = 440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| ||| |||| || ||||| |||||||| ||||| || || Sbjct: 179 catcacactacggcggctttcatccgagttgtgggttctgagtttgttcagaaatatttg 238 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||| || || | ||||| || ||||| || || || || ||||| || || || || Sbjct: 239 ggtgaaggtcctcgtatggtccgtgatgtctttcgtttggcaaaagaaaacgcacctgcc 298 Query: 126 ataatattcattgatgaggttgatgctatagccact 161 || ||||||||||||||| ||||||| || |||||| Sbjct: 299 atcatattcattgatgagattgatgccatcgccact 334
>emb|CR652378.2|CNS0F2CG Tetraodon nigroviridis full-length cDNA Length = 440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| ||| |||| || ||||| |||||||| ||||| || || Sbjct: 179 catcacactacggcggctttcatccgagttgtgggttctgagtttgttcagaaatatttg 238 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||| || || | ||||| || ||||| || || || || ||||| || || || || Sbjct: 239 ggtgaaggtcctcgtatggtccgtgatgtctttcgtttggcaaaagaaaacgcacctgcc 298 Query: 126 ataatattcattgatgaggttgatgctatagccact 161 || ||||||||||||||| ||||||| || |||||| Sbjct: 299 atcatattcattgatgagattgatgccatcgccact 334
>gb|AF227502.1| Trypanosoma brucei proteasome regulatory ATPase subunit 4 (Rpt4) gene, complete cds Length = 1637 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 189 gaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttga 244 ||||| || |||||||||| || |||||||||||| ||||||||||||| ||||| Sbjct: 905 gaccgcgaggttcagcgtacgctaatggaactactgcatcagatggatggctttga 960
>gb|AC158188.2| Selaginella moellendorffii clone JGIASXY-5I4, complete sequence Length = 37581 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 255 aatgtgaaggttataatggcaaccaatcgggcagatactctagatcctgctctgctgcgt 314 |||||||||||||| ||||| || ||||| || |||||| | || |||||||| ||| | Sbjct: 21372 aatgtgaaggttatcatggctacaaatcgtgccgatactttggaccctgctctactgagg 21431 Query: 315 ccaggaagactggacaggaaaattgagttccc 346 || ||| |||| |||||||| || |||||||| Sbjct: 21432 cctggacgactcgacaggaagatcgagttccc 21463 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Plus Query: 258 gtgaaggttataatggcaaccaatcgggcagatactctagatcctgctctgctgcgtcca 317 ||||||||||| ||||| || || || || |||||| | || || ||||| ||| | || Sbjct: 10524 gtgaaggttatcatggctacaaaccgtgctgatactttggaccccgctctactgaggcct 10583 Query: 318 ggaagactggacaggaaaattgagttccc 346 |||||||| |||||||| || |||||||| Sbjct: 10584 ggaagactcgacaggaagatcgagttccc 10612
>gb|U15601.1|ANU15601 Aspergillus niger 26S proteasome subunit (tbpA) gene, complete cds Length = 2120 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 118 ccccggctataatattcattgatgaggttgatgctatagccactgctcgattcgatgctc 177 ||||||| || || ||||| |||||| ||||||| || ||||| || ||||| || | Sbjct: 1229 ccccggccatcattttcatcgatgagattgatgccatcgccacgaagcgtttcgacgccc 1288 Query: 178 agaccggggctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatg 237 ||||||| || ||||| || || |||||||||||| |||| || || || |||||||||| Sbjct: 1289 agaccggtgcagaccgtgaggtgcagcgtattctgctggagcttctcaaccagatggatg 1348 Query: 238 gatt 241 |||| Sbjct: 1349 gatt 1352
>ref|XM_710241.1| Candida albicans SC5314 putative 26S proteasome regulatory particle ATPase Rpt3p (CaO19_5793), mRNA Length = 1236 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/139 (79%) Strand = Plus / Plus Query: 166 gattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactga 225 |||| |||||||| || || ||||| || |||||||| | ||| || |||| || ||| Sbjct: 791 gatttgatgctcaaactggtgctgatcgtgaagttcaaagaattttgttggagttattga 850 Query: 226 atcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcggg 285 |||| |||||||| |||||||||||| | ||| || ||||||||||| || || | | Sbjct: 851 atcaaatggatgggtttgatcagacatccactgtcaaagttataatggctactaacagag 910 Query: 286 cagatactctagatcctgc 304 |||||||| |||||||||| Sbjct: 911 cagatactttagatcctgc 929
>ref|XM_710176.1| Candida albicans SC5314 putative 26S proteasome regulatory particle ATPase Rpt3p (CaO19.13215), mRNA Length = 1236 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/139 (79%) Strand = Plus / Plus Query: 166 gattcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactga 225 |||| |||||||| || || ||||| || |||||||| | ||| || |||| || ||| Sbjct: 791 gatttgatgctcaaactggtgctgatcgtgaagttcaaagaattttgttggagttattga 850 Query: 226 atcagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcggg 285 |||| |||||||| |||||||||||| | ||| || ||||||||||| || || | | Sbjct: 851 atcaaatggatgggtttgatcagacatccactgtcaaagttataatggctactaacagag 910 Query: 286 cagatactctagatcctgc 304 |||||||| |||||||||| Sbjct: 911 cagatactttagatcctgc 929
>ref|XM_751600.1| Ustilago maydis 521 26S protease regulatory subunit 6B (UM00546.1) partial mRNA Length = 1155 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 39 ggttcagagtttgtgcagaagtacctgggtgagggcccaaggatggt 85 ||||| || ||||||||||| |||||||| || |||||||||||||| Sbjct: 595 ggttcggaatttgtgcagaaatacctgggcgaaggcccaaggatggt 641
>emb|AL954724.9| Zebrafish DNA sequence from clone CH211-265P12, complete sequence Length = 136892 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 45 gagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgtattccgctta 104 ||||||||||||||||| || |||||||| ||| | ||||| |||||||| || || | Sbjct: 104827 gagtttgtgcagaagtatcttggtgagggtccacgcatggtgcgagatgtctttcggctg 104886 Query: 105 gctaaagagaatgccccggctataatattcattgatgag 143 || |||||||| || || || || || |||||||||||| Sbjct: 104887 gccaaagagaacgcaccagccatcatcttcattgatgag 104925 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 262 aggttataatggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaa 321 ||||||| ||||| ||||| |||| || || || || ||||| |||||||||||||| | Sbjct: 105868 aggttatcatggccaccaacagggctgacacactggaccctgccctgctgcgtccaggta 105927 Query: 322 gactggacaggaaaattgagttccc 346 || ||||| | || ||||||||||| Sbjct: 105928 gattggaccgtaagattgagttccc 105952
>ref|XM_509951.1| PREDICTED: Pan troglodytes similar to Psmc6 protein (LOC452909), mRNA Length = 1167 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 842 cagatacactggatcctgctttgctgcgtccaggaaga 879 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 776 tactgaatcaaatggatggatttgat 801
>gb|AE006877.1| Sulfolobus solfataricus P2 section 236 of 272 of the complete genome Length = 13959 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 114 aatgccccggctataatattcattgatgag 143 ||||||||||| |||||||||||||||||| Sbjct: 4850 aatgccccggcaataatattcattgatgag 4821
>ref|XM_655416.1| Aspergillus nidulans FGSC A4 26S protease regulatory subunit 6B (AN2904.2), mRNA Length = 1293 Score = 52.0 bits (26), Expect = 0.002 Identities = 107/134 (79%) Strand = Plus / Plus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 |||||||| || || || ||||| || || |||||||||||||| ||||||| ||||| Sbjct: 850 ttcgatgcacaaactggtgctgatcgcgaggttcagcgtattctcctggaacttctgaac 909 Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 |||||||| || || || ||||| ||||||||||| || ||||| || || || ||| Sbjct: 910 cagatggacggtttcgagcagactagcaatgtgaaggtcatcatggccactaaccgagca 969 Query: 288 gatactctagatcc 301 ||||| || ||||| Sbjct: 970 gataccctggatcc 983
>gb|BT007531.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 mRNA, partial cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 845 cagatacactggatcctgctttgctgcgtccaggaaga 882 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 779 tactgaatcaaatggatggatttgat 804
>gb|BT006843.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 mRNA, complete cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 845 cagatacactggatcctgctttgctgcgtccaggaaga 882 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 779 tactgaatcaaatggatggatttgat 804
>gb|BC005390.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6, mRNA (cDNA clone MGC:12520 IMAGE:3996906), complete cds Length = 1595 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 865 cagatacactggatcctgctttgctgcgtccaggaaga 902 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 799 tactgaatcaaatggatggatttgat 824
>emb|CR615895.1| full-length cDNA clone CS0DI024YJ06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1509 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 834 cagatacactggatcctgctttgctgcgtccaggaaga 871 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 768 tactgaatcaaatggatggatttgat 793
>ref|NM_002806.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 (PSMC6), mRNA Length = 1590 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 865 cagatacactggatcctgctttgctgcgtccaggaaga 902 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 799 tactgaatcaaatggatggatttgat 824
>emb|CR624028.1| full-length cDNA clone CS0DE008YC13 of Placenta of Homo sapiens (human) Length = 1507 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 840 cagatacactggatcctgctttgctgcgtccaggaaga 877 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 774 tactgaatcaaatggatggatttgat 799
>emb|CR623246.1| full-length cDNA clone CS0DI074YH03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1511 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 841 cagatacactggatcctgctttgctgcgtccaggaaga 878 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 775 tactgaatcaaatggatggatttgat 800
>emb|CR622035.1| full-length cDNA clone CS0DA002YJ02 of Neuroblastoma of Homo sapiens (human) Length = 1498 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 831 cagatacactggatcctgctttgctgcgtccaggaaga 868 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 765 tactgaatcaaatggatggatttgat 790
>emb|CR621047.1| full-length cDNA clone CS0DI018YK19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1536 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 842 cagatacactggatcctgctttgctgcgtccaggaaga 879 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 776 tactgaatcaaatggatggatttgat 801
>emb|CR617697.1| full-length cDNA clone CS0DL004YH06 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1663 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 825 cagatacactggatcctgctttgctgcgtccaggaaga 862 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 759 tactgaatcaaatggatggatttgat 784
>emb|CR611308.1| full-length cDNA clone CS0DE005YE03 of Placenta of Homo sapiens (human) Length = 1459 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 841 cagatacactggatcctgctttgctgcgtccaggaaga 878 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 775 tactgaatcaaatggatggatttgat 800
>emb|CR608774.1| full-length cDNA clone CS0DI016YM01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1528 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 841 cagatacactggatcctgctttgctgcgtccaggaaga 878 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 775 tactgaatcaaatggatggatttgat 800
>emb|CR602871.1| full-length cDNA clone CS0DI005YB20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1511 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 840 cagatacactggatcctgctttgctgcgtccaggaaga 877 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 774 tactgaatcaaatggatggatttgat 799
>emb|CR595318.1| full-length cDNA clone CS0DI061YK22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1506 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 832 cagatacactggatcctgctttgctgcgtccaggaaga 869 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 766 tactgaatcaaatggatggatttgat 791
>emb|CR590720.1| full-length cDNA clone CS0DI025YI08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1514 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 824 cagatacactggatcctgctttgctgcgtccaggaaga 861 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 758 tactgaatcaaatggatggatttgat 783
>emb|CR456709.1| Homo sapiens full open reading frame cDNA clone RZPDo834G013D for gene PSMC6, proteasome (prosome, macropain) 26S subunit, ATPase, 6; complete cds, incl. stopcodon Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 845 cagatacactggatcctgctttgctgcgtccaggaaga 882 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 779 tactgaatcaaatggatggatttgat 804
>gb|AY892558.1| Synthetic construct Homo sapiens clone FLH013619.01L proteasome 26S subunit 6 (PSMC6) mRNA, partial cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 845 cagatacactggatcctgctttgctgcgtccaggaaga 882 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 779 tactgaatcaaatggatggatttgat 804
>gb|AY890076.1| Synthetic construct Homo sapiens clone FLH013623.01X proteasome 26S subunit 6 (PSMC6) mRNA, complete cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 845 cagatacactggatcctgctttgctgcgtccaggaaga 882 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 779 tactgaatcaaatggatggatttgat 804
>gb|AY890075.1| Synthetic construct Homo sapiens clone FLH013622.01X proteasome 26S subunit 6 (PSMC6) mRNA, complete cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 845 cagatacactggatcctgctttgctgcgtccaggaaga 882 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 779 tactgaatcaaatggatggatttgat 804
>emb|AL133453.3|CNS01DV4 Human chromosome 14 DNA sequence BAC R-841O20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 212103 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 184080 cagatacactggatcctgctttgctgcgtccaggaaga 184117 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 184014 tactgaatcaaatggatggatttgat 184039
>gb|AF006305.1|AF006305 Homo sapiens 26S proteasome regulatory subunit (SUG2) mRNA, complete cds Length = 1579 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 860 cagatacactggatcctgctttgctgcgtccaggaaga 897 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 794 tactgaatcaaatggatggatttgat 819
>dbj|D78275.1| Homo sapiens mRNA for proteasome subunit p42, complete cds Length = 1560 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||||||||||||||| Sbjct: 861 cagatacactggatcctgctttgctgcgtccaggaaga 898 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 795 tactgaatcaaatggatggatttgat 820
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 112 agaatgccccggctataatattcattgatgaggttga 148 ||||||||||| |||| ||||||||||||||| |||| Sbjct: 988 agaatgccccgtctatcatattcattgatgagattga 1024
>gb|BC083283.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 6, mRNA (cDNA clone MGC:101799 IMAGE:7231258), complete cds Length = 1561 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaagactggac 329 ||||| ||||| ||| |||| ||| |||||||||| ||||||||||| ||| | |||||| Sbjct: 862 atggccaccaaccggccagacactttagatcctgccctgctgcgtcctggacgtctggac 921 Query: 330 aggaaaatt 338 | |||||| Sbjct: 922 cgaaaaatt 930 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 210 ctgatggaactactgaatcagatggatggatt 241 |||||||| || |||||||||||||||||||| Sbjct: 802 ctgatggagctgctgaatcagatggatggatt 833
>gb|AY648827.1| Danio rerio 26S protease regulatory subunit S10B mRNA, complete cds Length = 1554 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaagactggac 329 ||||| ||||| ||| |||| ||| |||||||||| ||||||||||| ||| | |||||| Sbjct: 852 atggccaccaaccggccagacactttagatcctgccctgctgcgtcctggacgtctggac 911 Query: 330 aggaaaatt 338 | |||||| Sbjct: 912 cgaaaaatt 920 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 210 ctgatggaactactgaatcagatggatggatt 241 |||||||| || |||||||||||||||||||| Sbjct: 792 ctgatggagctgctgaatcagatggatggatt 823
>ref|XM_368336.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00908.4) partial mRNA Length = 1266 Score = 50.1 bits (25), Expect = 0.009 Identities = 118/149 (79%) Strand = Plus / Plus Query: 198 gttcagcgtattctgatggaactactgaatcagatggatggatttgatcagacagtgaat 257 ||||||||||||||| | || || ||||| |||||||| || || || ||||| | || Sbjct: 853 gttcagcgtattctgctcgagcttctgaaccagatggacggtttcgaccagactgccaac 912 Query: 258 gtgaaggttataatggcaaccaatcgggcagatactctagatcctgctctgctgcgtcca 317 || ||||| || ||||||||||| |||| || ||||| |||||||| || || ||||| Sbjct: 913 gtcaaggtcattatggcaaccaacagggccgacactctcgatcctgcccttctccgtccc 972 Query: 318 ggaagactggacaggaaaattgagttccc 346 || || ||||| | || ||||||||||| Sbjct: 973 ggtcgattggaccgtaagattgagttccc 1001
>ref|XM_868959.1| PREDICTED: Bos taurus similar to proteasome 26S ATPase subunit 6 (LOC518637), mRNA Length = 1948 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 213 atggaactactgaatcagatggatggatttgat 245 ||||| ||||||||||| ||||||||||||||| Sbjct: 814 atggagctactgaatcaaatggatggatttgat 846
>ref|XM_813480.1| Trypanosoma cruzi strain CL Brener proteasome regulatory ATPase subunit 3 (Tc00.1047053507603.200) partial mRNA Length = 1212 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 231 atggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcg 283 |||||||| ||||| ||||| ||||||||||||||| |||||||| ||||| Sbjct: 838 atggatggctttgaccagacgacgaatgtgaaggttatcatggcaacaaatcg 890 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 45 gagtttgtgcagaagtacctgggtgaggg 73 |||||||||||||||||||| || ||||| Sbjct: 652 gagtttgtgcagaagtacctcggcgaggg 680
>ref|XM_815076.1| Trypanosoma cruzi strain CL Brener proteasome regulatory ATPase subunit 3 (Tc00.1047053509429.270) partial mRNA Length = 1212 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 231 atggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcg 283 |||||||| ||||| ||||| ||||||||||||||| |||||||| ||||| Sbjct: 838 atggatggctttgaccagacgacgaatgtgaaggttatcatggcaacaaatcg 890
>gb|BC112482.1| Bos taurus similar to proteasome 26S ATPase subunit 6, mRNA (cDNA clone MGC:137217 IMAGE:8014462), complete cds Length = 1605 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 213 atggaactactgaatcagatggatggatttgat 245 ||||| ||||||||||| ||||||||||||||| Sbjct: 809 atggagctactgaatcaaatggatggatttgat 841
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 112 agaatgccccggctataatattcattgatgaggttga 148 ||||||||||| |||| ||||||||||||||| |||| Sbjct: 25548 agaatgccccgtctatcatattcattgatgagattga 25512
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 112 agaatgccccggctataatattcattgatgaggttga 148 ||||||||||| |||| ||||||||||||||| |||| Sbjct: 893 agaatgccccgtctatcatattcattgatgagattga 929
>ref|NM_001003832.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 6 (psmc6), mRNA Length = 1554 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaagactggac 329 ||||| ||||| ||| |||| ||| |||||||||| ||||||||||| ||| | |||||| Sbjct: 852 atggccaccaaccggccagacactttagatcctgccctgctgcgtcctggacgtctggac 911 Query: 330 aggaaaatt 338 | |||||| Sbjct: 912 cgaaaaatt 920 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 210 ctgatggaactactgaatcagatggatggatt 241 |||||||| || |||||||||||||||||||| Sbjct: 792 ctgatggagctgctgaatcagatggatggatt 823
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 112 agaatgccccggctataatattcattgatgaggttga 148 ||||||||||| |||| ||||||||||||||| |||| Sbjct: 988 agaatgccccgtctatcatattcattgatgagattga 1024
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 112 agaatgccccggctataatattcattgatgaggttga 148 ||||||||||| |||| ||||||||||||||| |||| Sbjct: 981 agaatgccccgtctatcatattcattgatgagattga 1017
>emb|AL954679.7| Zebrafish DNA sequence from clone DKEY-63J12 in linkage group 20, complete sequence Length = 132218 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaagactggac 329 ||||| ||||| ||| |||| ||| |||||||||| ||||||||||| ||| | |||||| Sbjct: 95389 atggccaccaaccggccagacactttagatcctgccctgctgcgtcctggacgtctggac 95330 Query: 330 aggaaaatt 338 | |||||| Sbjct: 95329 cgaaaaatt 95321 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctgaatcagatggatggatt 241 |||||||||||||||||||| Sbjct: 95437 ctgaatcagatggatggatt 95418
>gb|BC073644.1| Xenopus laevis similar to proteasome 26S ATPase subunit 6, mRNA (cDNA clone IMAGE:5515801), partial cds Length = 1552 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 |||||||||||| ||||| | | ||| ||||| | ||||| |||||||||||||||||| Sbjct: 755 gctgaccgagaaattcagagaactctaatggagttgctgaaccagatggatggatttgat 814
>gb|DQ440313.1| Aedes aegypti clone AET-397 26S proteasome regulatory chain 4 mRNA, complete cds Length = 1317 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 256 atgtgaaggttataatggcaaccaatcg 283 ||||||||||||| |||||||||||||| Sbjct: 965 atgtgaaggttattatggcaaccaatcg 992
>gb|BC045087.1| Xenopus laevis similar to proteasome 26S ATPase subunit 6, mRNA (cDNA clone IMAGE:5542937), partial cds Length = 1585 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatggatttgat 245 |||||||||||| ||||| | | ||| ||||| | ||||| |||||||||||||||||| Sbjct: 788 gctgaccgagaaattcagagaactctaatggagttgctgaaccagatggatggatttgat 847
>emb|CR699648.2|CNS0G2SS Tetraodon nigroviridis full-length cDNA Length = 441 Score = 48.1 bits (24), Expect = 0.034 Identities = 123/156 (78%) Strand = Plus / Plus Query: 6 catcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtacctg 65 ||||||||||| || ||||| ||| |||| || ||||| |||||||| ||||| || || Sbjct: 180 catcacactacggcggctttcatccgagttgtgggttctgagtttgttcagaaatatttg 239 Query: 66 ggtgagggcccaaggatggttcgagatgtattccgcttagctaaagagaatgccccggct 125 ||||| || || | ||||| || ||||| || || || || || || || || || || Sbjct: 240 ggtgaaggtcctcgtatggtccgtgatgtctttcgtttggcaaaggaaaacgcacctgcc 299 Query: 126 ataatattcattgatgaggttgatgctatagccact 161 || ||||||||||||||| ||||||| || |||||| Sbjct: 300 atcatattcattgatgagattgatgccatcgccact 335
>gb|AF475102.1| Triticum aestivum tat binding protein mRNA, partial cds Length = 564 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Plus Query: 273 gcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaagactggacagg 332 ||||||||||| ||||||| ||| ||||||||| | || ||| | || | |||||||| Sbjct: 409 gcaaccaatcgtgcagatattctcgatcctgctttactccgttctggtcgcctggacaga 468 Query: 333 aaaattgagttccctc 348 || ||||||||||||| Sbjct: 469 aagattgagttccctc 484
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 3 gcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtac 62 ||||||||||| | ||| || || || || ||||| ||||| || ||||||||||||||| Sbjct: 430590 gcacatcacacgaatgcggccttcattagtgtggtgggttcggaatttgtgcagaagtac 430531 Query: 63 ctgggtgaggg 73 || || ||||| Sbjct: 430530 cttggcgaggg 430520 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 231 atggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcg 283 |||||||| |||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 430362 atggatggttttgatcagacaactaacgtgaaagttatcatggcgaccaatcg 430310
>gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7, complete sequence Length = 175357 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 3 gcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtac 62 ||||||||||| | ||| || || || || ||||| ||||| || ||||||||||||||| Sbjct: 82406 gcacatcacacgaatgcggccttcattagtgtggtgggttcggaatttgtgcagaagtac 82347 Query: 63 ctgggtgaggg 73 || || ||||| Sbjct: 82346 cttggcgaggg 82336 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 231 atggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcg 283 |||||||| |||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 82178 atggatggttttgatcagacaactaacgtgaaagttatcatggcgaccaatcg 82126
>ref|XM_821194.1| Trypanosoma brucei TREU927 clone RPCI93-3A7 proteasome regulatory ATPase subunit 3 (Tb927.6.1090) partial mRNA Length = 1212 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 3 gcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtac 62 ||||||||||| | ||| || || || || ||||| ||||| || ||||||||||||||| Sbjct: 610 gcacatcacacgaatgcggccttcattagtgtggtgggttcggaatttgtgcagaagtac 669 Query: 63 ctgggtgaggg 73 || || ||||| Sbjct: 670 cttggcgaggg 680 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 atggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcg 283 |||||||| |||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 838 atggatggttttgatcagacaactaacgtgaaagttatcatggcgaccaatcg 890
>ref|XM_643629.1| Entamoeba histolytica HM-1:IMSS 26s proteasome subunit P45 family protein (402.t00003) partial mRNA Length = 1170 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 444 cctgataaaatcagtgctgctgatatcactgctatttgccaggaagctggcatgcatgc 502 |||||||||||||||| ||| || || || ||||||| || |||||||| |||||||| Sbjct: 1012 cctgataaaatcagtggtgcagaaatagcttctatttgtcaagaagctggtatgcatgc 1070
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 226576 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 297 gatcctgctctgctgcgtccaggaagactggacag 331 |||||||| || || |||||||||||||||||||| Sbjct: 25137 gatcctgcgcttctacgtccaggaagactggacag 25103
>emb|AJ719962.1| Gallus gallus mRNA for hypothetical protein, clone 8n6 Length = 1570 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 223 tgaatcagatggatggatttgat 245 ||||||||||||||||||||||| Sbjct: 800 tgaatcagatggatggatttgat 822
>ref|NM_001006494.1| Gallus gallus proteasome (prosome, macropain) 26S subunit, ATPase, 6 (PSMC6), mRNA Length = 1570 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 223 tgaatcagatggatggatttgat 245 ||||||||||||||||||||||| Sbjct: 800 tgaatcagatggatggatttgat 822
>gb|AF227501.1| Trypanosoma brucei proteasome regulatory ATPase subunit 3 (Rpt3) gene, complete cds Length = 1789 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 3 gcacatcacactactgctgcttttatcagagtggttggttcagagtttgtgcagaagtac 62 ||||||||||| | ||| || || || || ||||| ||||| || ||||||||||||||| Sbjct: 1003 gcacatcacacgaatgcggccttcattagtgtggtgggttcggaatttgtgcagaagtac 1062 Query: 63 ctgggtgaggg 73 || || ||||| Sbjct: 1063 cttggcgaggg 1073 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 atggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcg 283 |||||||| |||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 1231 atggatggttttgatcagacaactaacgtgaaagttatcatggcgaccaatcg 1283
>emb|CR386272.1| Gallus gallus finished cDNA, clone ChEST60c2 Length = 1546 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 223 tgaatcagatggatggatttgat 245 ||||||||||||||||||||||| Sbjct: 791 tgaatcagatggatggatttgat 813
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 262797 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 318 ggaagactggacaggaaaattgagttccctctgcc 352 ||||| || |||||||| ||||||||||||||||| Sbjct: 201237 ggaaggctcgacaggaagattgagttccctctgcc 201203 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 42 tcagagtttgtgcagaagtacctgggtgagggcccaaggatggt 85 |||||||| ||||||||||| || || |||||||| ||||||| Sbjct: 15183 tcagagttcgtgcagaagtatcttggagagggcccgcggatggt 15226
>ref|XM_637738.1| Dictyostelium discoideum hypothetical protein (DDB0168337), partial mRNA Length = 1287 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccagg 319 |||||||||||||| |||||||| | ||||| ||||| || |||||||| Sbjct: 940 atggcaaccaatcgtccagatactttggatccagctcttcttcgtccagg 989
>ref|XM_509208.1| PREDICTED: Pan troglodytes similar to conserved ATPase domain protein 44 (LOC452063), mRNA Length = 927 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 722 tactgaatcaaatggatggatttgat 747
>ref|XM_519765.1| PREDICTED: Pan troglodytes similar to conserved ATPase domain protein 44 (LOC464183), mRNA Length = 1458 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||| ||||||||||| Sbjct: 791 cagatacactggatcctgctttgctgtgtccaggaaga 828 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 725 tactgaatcaaatggatggatttgat 750
>gb|AY348237.1| Drosophila insignita RPT4 (Rpt4) gene, partial cds Length = 458 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccagg 319 |||||||||||||| |||| |||||||| ||||| || |||||||||| Sbjct: 188 atggcaaccaatcgtccagacactctagaccctgccctattgcgtccagg 237
>gb|AY348236.1| Drosophila bipolita RPT4 (Rpt4) gene, partial cds Length = 458 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccagg 319 |||||||||||||| |||| |||||||| ||||| || |||||||||| Sbjct: 178 atggcaaccaatcgtccagacactctagaccctgccctattgcgtccagg 227
>gb|AY348235.1| Drosophila canipolita RPT4 (Rpt4) gene, partial cds Length = 466 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccagg 319 |||||||||||||| |||| |||||||| ||||| || |||||||||| Sbjct: 185 atggcaaccaatcgtccagacactctagaccctgccctattgcgtccagg 234
>gb|AF165146.6| Homo sapiens chromosome 8 clone CTA-397H3 map q12.1, complete sequence Length = 110554 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 20870 tactgaatcaaatggatggatttgat 20845 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||| ||||||||||| Sbjct: 20804 cagatacactggatcctgctttgctgtgtccaggaaga 20767
>ref|XM_535701.2| PREDICTED: Canis familiaris similar to proteasome 26S ATPase subunit 6 (LOC478522), mRNA Length = 1893 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| |||| |||||||||||| Sbjct: 887 cagatacactggatcctgctttgcttcgtccaggaaga 924
>ref|XM_758573.1| Theileria parva strain Muguga chromosome 4 26S proteasome aaa-ATPase subunit Rpt3 (TP04_0031) partial mRNA Length = 1191 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 214 tggaactactgaatcagatggatggatttgatca 247 ||||||| ||||| || ||||||||||||||||| Sbjct: 800 tggaacttctgaaccaaatggatggatttgatca 833
>emb|BX067090.1|CNS09NXI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50CE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1015 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 231 atggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggcagat 290 |||||||| || |||||||| ||| |||||||| || ||||| || || ||||| ||| Sbjct: 896 atggatgggttcgatcagacgacgaacgtgaaggtgatcatggccactaaccgggccgat 955 Query: 291 actctagatcctgctctgctgcgtcc 316 || || ||||| || ||||||||||| Sbjct: 956 acgctcgatccggccctgctgcgtcc 981
>emb|Z38135.1|MSDBATPMR M.sexta mRNA for DEAD-box ATPase Length = 1341 Score = 44.1 bits (22), Expect = 0.53 Identities = 97/122 (79%) Strand = Plus / Plus Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| |||||||| ||| ||||| || || || ||||| || ||||| || Sbjct: 906 cagatggatggctttgatcaaacaaccaatgttaaagtaattatggccacaaatcgtgct 965 Query: 288 gatactctagatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccct 347 ||||| ||||||| ||||| || | || ||| | |||| |||||||||||||||||| Sbjct: 966 gataccttagatcccgctctacttagacctggacgtttggataggaaaattgagttccct 1025 Query: 348 ct 349 || Sbjct: 1026 ct 1027 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 57 aagtacctgggtgagggcccaaggatggttcgagatgtattccg 100 |||||| ||||||| ||||| | |||||||||||||| ||||| Sbjct: 735 aagtacttgggtgaaggccctcgtatggttcgagatgtgttccg 778
>emb|AL031798.1|SPCC576 S.pombe chromosome III cosmid c576 Length = 35566 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 60 tacctgggtgagggcccaaggatggttcgagatgtatt 97 ||||| |||||||| ||| | ||||||||||||||||| Sbjct: 18058 taccttggtgagggtccacgtatggttcgagatgtatt 18021
>gb|BC063157.1| Rattus norvegicus peptidase (prosome, macropain) 26S subunit, ATPase 1, mRNA (cDNA clone MGC:72724 IMAGE:6919865), complete cds Length = 1586 Score = 44.1 bits (22), Expect = 0.53 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaag 79 |||||||||| |||||| || | ||||||||||| ||||| ||||||||| Sbjct: 773 gagtggttggctcagagcttattcagaagtacctaggtgacgggcccaag 822
>gb|AC046176.13| Homo sapiens chromosome 8, clone RP11-446E9, complete sequence Length = 184349 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||| ||||||||||| Sbjct: 4283 cagatacactggatcctgctttgctgtgtccaggaaga 4320 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 4217 tactgaatcaaatggatggatttgat 4242
>gb|AC091671.28| Papio anubis clone rp41-192i11, complete sequence Length = 173021 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 104707 tactgaatcaaatggatggatttgat 104682 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 286 cagatactctagatcctgctctgctgcgtccagg 319 ||||||| || ||||||||| ||||||||||||| Sbjct: 104641 cagatacactggatcctgctttgctgcgtccagg 104608
>gb|AC107376.7| Homo sapiens chromosome 8, clone CTA-397H3, complete sequence Length = 110554 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 20871 tactgaatcaaatggatggatttgat 20846 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||| ||||||||||| Sbjct: 20805 cagatacactggatcctgctttgctgtgtccaggaaga 20768
>gb|AC008971.6| Homo sapiens chromosome 5 clone CTD-2376B17, complete sequence Length = 131856 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 23370 tactgaatcaaatggatggatttgat 23345
>ref|NM_001023428.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC576.10c), partial mRNA Length = 1170 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 60 tacctgggtgagggcccaaggatggttcgagatgtatt 97 ||||| |||||||| ||| | ||||||||||||||||| Sbjct: 622 taccttggtgagggtccacgtatggttcgagatgtatt 659
>gb|AC008954.6|AC008954 Homo sapiens chromosome 5 clone CTD-2340N2, complete sequence Length = 90111 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 58886 tactgaatcaaatggatggatttgat 58861
>ref|NG_002379.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 pseudogene (PSMC6P) on chromosome 8 Length = 1736 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| ||||| ||||||||||| Sbjct: 954 cagatacactggatcctgctttgctgtgtccaggaaga 991 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 888 tactgaatcaaatggatggatttgat 913
>ref|NG_001564.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 pseudogene (LOC160410) on chromosome 12 Length = 1181 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 876 tactgaatcaaatggatggatttgat 901
>gb|AC139783.3| Homo sapiens chromosome 5 clone RP11-1084J3, complete sequence Length = 189108 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 82098 tactgaatcaaatggatggatttgat 82123
>gb|AC008033.9| Homo sapiens 12 BAC RP11-81H14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149136 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 54404 tactgaatcaaatggatggatttgat 54379
>gb|AC116987.2| Dictyostelium discoideum chromosome 2 map 3527441-3568052 strain AX4, complete sequence Length = 40611 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccagg 319 |||||||||||||| |||||||| | ||||| ||||| || |||||||| Sbjct: 39033 atggcaaccaatcgtccagatactttggatccagctcttcttcgtccagg 39082
>ref|NM_057123.1| Rattus norvegicus peptidase (prosome, macropain) 26S subunit, ATPase 1 (Psmc1), mRNA Length = 1556 Score = 44.1 bits (22), Expect = 0.53 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaag 79 |||||||||| |||||| || | ||||||||||| ||||| ||||||||| Sbjct: 761 gagtggttggctcagagcttattcagaagtacctaggtgacgggcccaag 810
>gb|AY609771.1| Sus scrofa clone Clu_3050.scr.msk.p1.Contig3, mRNA sequence Length = 2107 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 286 cagatactctagatcctgctctgctgcgtccaggaaga 323 ||||||| || ||||||||| |||| |||||||||||| Sbjct: 1385 cagatacactggatcctgctttgcttcgtccaggaaga 1422
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/54 (85%) Strand = Plus / Minus Query: 104 agctaaagagaatgccccggctataatattcattgatgaggttgatgctatagc 157 |||| |||||||||| || |||||||||||||||||| |||| |||||||| Sbjct: 1096319 agctgaagagaatgctccaagtataatattcattgatgaaattgacgctatagc 1096266
>gb|U36395.1|STU36395 Spermophilus tridecemlineatus 26S Proteasome S.U. CADp44 - a conserved ATPase domain protein of 44kDa (CADp44) gene, complete cds Length = 1566 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 tactgaatcagatggatggatttgat 245 |||||||||| ||||||||||||||| Sbjct: 788 tactgaatcaaatggatggatttgat 813
>gb|U39304.1|CGU39304 Cricetinae gen. sp. 26S proteasome subunit 4 ATPase mRNA, partial cds Length = 431 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 30 agagtggttggttcagagtttgtgcagaagtacctggg 67 ||||||||||| |||||| || | |||||||||||||| Sbjct: 271 agagtggttggctcagagcttattcagaagtacctggg 308
>dbj|D50696.1|RATPAS Rattus norvegicus mRNA for proteasomal ATPase (S4), complete cds Length = 1556 Score = 44.1 bits (22), Expect = 0.53 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaag 79 |||||||||| |||||| || | ||||||||||| ||||| ||||||||| Sbjct: 761 gagtggttggctcagagcttattcagaagtacctaggtgacgggcccaag 810
>gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome subunit 4-like mRNA, complete cds Length = 1581 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 297 gatcctgctctgctgcgtccaggaagactggacaggaaaattgagttccctct 349 |||||||| || ||||| || || ||| | |||||||| |||||||||||||| Sbjct: 1061 gatcctgccctactgcgacctggtagaatagacaggaagattgagttccctct 1113
>ref|XM_363655.1| Magnaporthe grisea 70-15 hypothetical protein (MG01581.4) partial mRNA Length = 1320 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 51 gtgcagaagtacctgggtgagggcccaaggatggttcgaga 91 |||||||||||| ||||||||||| | | ||||||||||| Sbjct: 754 gtgcagaagtacgtgggtgagggcgcccgtatggttcgaga 794
>gb|BC003860.1| Mus musculus protease (prosome, macropain) 26S subunit, ATPase 1, mRNA (cDNA clone MGC:6597 IMAGE:3486436), complete cds Length = 1541 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 769 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 817
>ref|XM_452489.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C06545g predicted mRNA Length = 198 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 42 tcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgt 94 |||||||||||||| || ||| | ||||| || ||||| |||||| ||||||| Sbjct: 113 tcagagtttgtgcataaatacttaggtgaagggccaagaatggttagagatgt 61
>gb|AY915912.1| Schistosoma japonicum Tat binding protein 7, TBP-7 mRNA, complete cds Length = 592 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 261 aaggttataatggcaaccaatcgggcagatactctagatcc 301 |||||||| ||||| |||||||| || || ||||||||||| Sbjct: 4 aaggttatcatggctaccaatcgtgctgacactctagatcc 44
>gb|AC166349.4| Mus musculus BAC clone RP24-192I21 from chromosome 12, complete sequence Length = 168529 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 90214 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 90262
>ref|XM_448634.1| Candida glabrata CBS138, CAGL0K09526g partial mRNA Length = 1296 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 38 tggttcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgt 94 |||||| || ||||| ||||| ||||||||||| || || || |||||||| ||||| Sbjct: 723 tggttctgaatttgttcagaaatacctgggtgaaggtcctagaatggttcgtgatgt 779 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 ||||||||||| || || |||| || |||||||| |||||| |||| ||| || | | Sbjct: 853 ttcgatgctcaaactggttctgatcgtgaagttcaacgtattttgattgaattattaacc 912 Query: 228 cagatggatggatttgatca 247 ||||||||||| |||||||| Sbjct: 913 cagatggatggttttgatca 932
>emb|CR727357.3|CNS0GO6B Tetraodon nigroviridis full-length cDNA Length = 440 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 129 atattcattgatgaggttgatgctatagccact 161 ||||||||||||||| ||||||| || |||||| Sbjct: 302 atattcattgatgagattgatgccatcgccact 334
>emb|BX067091.1|CNS09NXJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50CE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 832 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Minus Query: 228 cagatggatggatttgatcagacagtgaatgtgaaggttataatggcaaccaatcgggca 287 ||||||||||| || | |||||| ||| |||||||| || ||||| || || ||||| Sbjct: 490 cagatggatgggttcgttcagacgacgaacgtgaaggtgatcatggccactaaccgggcc 431 Query: 288 gatactctagatcctgctctgctgcgtcc 316 ||||| || ||||| || ||||||||||| Sbjct: 430 gatacgctcgatccggccctgctgcgtcc 402 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 185 aaggacttcgagaagggttac 165
>emb|BX057192.1|CNS09GAK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC37AB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 379 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 198 aaggacttcgagaagggttac 178
>emb|BX048935.1|CNS099X7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24BG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 153 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 137 aaggacttcgagaagggttac 117
>emb|BX047011.1|CNS098FR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC20DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 127 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 112 aaggacttcgagaagggttac 92
>emb|BX030223.1|CNS08VHF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA45AE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 138 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 aaggacttcgagaagggttac 554 ||||||||||||||||||||| Sbjct: 134 aaggacttcgagaagggttac 114
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 38 tggttcagagtttgtgcagaagtacctgggtgagggcccaaggatggttcgagatgt 94 |||||| || ||||| ||||| ||||||||||| || || || |||||||| ||||| Sbjct: 939396 tggttctgaatttgttcagaaatacctgggtgaaggtcctagaatggttcgtgatgt 939452 Score = 40.1 bits (20), Expect = 8.2 Identities = 65/80 (81%) Strand = Plus / Plus Query: 168 ttcgatgctcagaccggggctgaccgagaagttcagcgtattctgatggaactactgaat 227 ||||||||||| || || |||| || |||||||| |||||| |||| ||| || | | Sbjct: 939526 ttcgatgctcaaactggttctgatcgtgaagttcaacgtattttgattgaattattaacc 939585 Query: 228 cagatggatggatttgatca 247 ||||||||||| |||||||| Sbjct: 939586 cagatggatggttttgatca 939605
>emb|AL049728.1|SPCC306 S.pombe chromosome III cosmid c306 Length = 25465 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatgg 238 ||||| || ||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 129 gctgatcgtgaaattcagcgtacattgatggaattattgaatcagatggatgg 181
>gb|AC103559.2| Homo sapiens chromosome 3 clone RP11-286L5, complete sequence Length = 184133 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 tgtgaaggttataatggcaac 277 ||||||||||||||||||||| Sbjct: 79957 tgtgaaggttataatggcaac 79977
>gb|AC098481.2| Homo sapiens chromosome 3 clone RP11-349E16, complete sequence Length = 227137 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 tgtgaaggttataatggcaac 277 ||||||||||||||||||||| Sbjct: 203711 tgtgaaggttataatggcaac 203731
>gb|AC087269.5| Homo sapiens chromosome 8, clone RP11-211C9, complete sequence Length = 187924 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 atgaacttgagtgatgaggtt 419 ||||||||||||||||||||| Sbjct: 159070 atgaacttgagtgatgaggtt 159050
>dbj|AK133926.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730529E17 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence Length = 1577 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 787 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 835
>dbj|AK148906.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120461K19 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence Length = 1524 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 775 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 823
>dbj|AK166783.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0012N12 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence Length = 1517 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 768 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 816
>dbj|AK161723.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830416M11 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence Length = 1552 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 803 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 851
>dbj|AK161641.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730432L10 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence Length = 1551 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 802 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 850
>dbj|AK169015.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920075A18 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence Length = 1515 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 766 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 814
>gb|AC159243.2| Mus musculus BAC clone RP24-274F15 from chromosome 12, complete sequence Length = 163575 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 162021 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 162069
>ref|NM_001022802.1| Schizosaccharomyces pombe 972h- 19S proteasome regulatory subunit (SPCC1682.16), partial mRNA Length = 1167 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 186 gctgaccgagaagttcagcgtattctgatggaactactgaatcagatggatgg 238 ||||| || ||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 742 gctgatcgtgaaattcagcgtacattgatggaattattgaatcagatggatgg 794
>dbj|AK088411.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430016A19 product:protease (prosome, macropain) 26S subunit, ATPase 1, full insert sequence Length = 1521 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 783 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 831
>emb|BX936454.25| Zebrafish DNA sequence from clone DKEY-29M11 in linkage group 20, complete sequence Length = 225683 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 270 atggcaaccaatcgggcagatactctagatcctgctctgctgcgtccaggaagactggac 329 ||||| ||||| ||| | || ||| |||||||||| ||||||||||| ||| | |||||| Sbjct: 111402 atggccaccaaccggcctgacactttagatcctgccctgctgcgtcctggacgtctggac 111461 Query: 330 aggaaaatt 338 | |||||| Sbjct: 111462 cgaaaaatt 111470 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ctgaatcagatggatggatt 241 |||||||||||||||||||| Sbjct: 111354 ctgaatcagatggatggatt 111373
>dbj|AK063910.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A05, full insert sequence Length = 1227 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 atattcattgatgaggttgat 149 ||||||||||||||||||||| Sbjct: 111 atattcattgatgaggttgat 131
>gb|AY609476.1| Sus scrofa clone Clu_12870.scr.msk.p1.Contig3, mRNA sequence Length = 1571 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 315 ccaggaagactggacaggaaaattgagtt 343 ||||| |||||||||||||| |||||||| Sbjct: 1071 ccagggagactggacaggaagattgagtt 1099
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 126 ataatattcattgatgaggttgatgctatagcc 158 ||||| |||||||||||| ||||||| |||||| Sbjct: 407982 ataattttcattgatgagcttgatgcaatagcc 408014
>ref|NM_008947.1| Mus musculus protease (prosome, macropain) 26S subunit, ATPase 1 (Psmc1), mRNA Length = 1503 Score = 42.1 bits (21), Expect = 2.1 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 31 gagtggttggttcagagtttgtgcagaagtacctgggtga-gggcccaa 78 |||||||||| |||||| || | ||||||||||| ||||| |||||||| Sbjct: 754 gagtggttggctcagagcttatccagaagtacctaggtgacgggcccaa 802 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,464,021 Number of Sequences: 3902068 Number of extensions: 5464021 Number of successful extensions: 91780 Number of sequences better than 10.0: 378 Number of HSP's better than 10.0 without gapping: 379 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90666 Number of HSP's gapped (non-prelim): 1004 length of query: 604 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 581 effective length of database: 17,143,297,704 effective search space: 9960255966024 effective search space used: 9960255966024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)