>FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolase FAF (EC|
            3.1.2.15) (Ubiquitin thioesterase FAF) (Ubiquitin
            specific-processing protease FAF) (Deubiquitinating
            enzyme FAF) (Protein fat facets)
          Length = 2778

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 211  REPLRIFYESLSKQIPSSEMAQFWLMEHGLLSP 309
            R P+  +Y++LS  I SS + + W   H LLSP
Sbjct: 2165 RGPVMEWYDALSHHIRSSALVRKWFANHALLSP 2197

>FUS_MEASZ (P69358) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 550

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 504 LGGLIGIPALICCCR 518

>FUS_MEASP (P69357) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 550

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 504 LGGLIGIPALICCCR 518

>FUS_MEASL (P69356) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 550

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 504 LGGLIGIPALICCCR 518

>FUS_MEASH (P69355) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 550

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 504 LGGLIGIPALICCCR 518

>FUS_MEASF (P69354) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 550

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 504 LGGLIGIPALICCCR 518

>FUS_MEASE (P69353) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 550

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 504 LGGLIGIPALICCCR 518

>FUS_MEASA (P35973) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 550

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 504 LGGLIGIPALICCCR 518

>FUS_MEASY (P26032) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 534

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 504 LGGLIGIPALICCCR 518

>FUS_MEASI (P26031) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 529

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 389 LDALIGVPDLICCCR 345
           L  LIG+P LICCCR
Sbjct: 507 LGGLIGIPALICCCR 521

>MSH5_MOUSE (Q9QUM7) MutS protein homolog 5|
          Length = 833

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +1

Query: 196 ETPEEREPLRIFYESLSKQIPSSEMAQFWLMEHGLLSP--ERAKQAYDRKLKRQQQIKSG 369
           ET E+ E L  FY+ L + + S+  A     + GL  P   R K+  D        I+SG
Sbjct: 729 ETCEDGEDLVFFYQ-LCQGVASASHASHTAAQAGLPDPLIARGKEVSDL-------IRSG 780

Query: 370 TPIKASN 390
            PIKA+N
Sbjct: 781 KPIKATN 787

>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +1

Query: 175  SLTGQKFETPEEREPLRIFYESLSKQIPSSEMAQFWLMEHGLLSPERAKQAYDRKLKRQQ 354
            ++  Q  E+ +E + L+     L  Q+   E A     EH  L  E+AK  YD K ++ Q
Sbjct: 1574 AVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAA----EHYKLQMEKAKTHYDAKKQQNQ 1629

Query: 355  QIK 363
            +++
Sbjct: 1630 ELQ 1632

>DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 295

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +1

Query: 184 GQKFETPEEREPLRIFYESLSKQIPSSEMAQFWLMEHGLLSPERAKQAY 330
           G+  ++PEER  L   YE +     S+    +W  +   L P    QAY
Sbjct: 177 GEHLQSPEERRRLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQAY 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.127    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,487,144
Number of Sequences: 219361
Number of extensions: 750342
Number of successful extensions: 1792
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)