ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdf07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107574.1| Zea mays PCO137295 mRNA sequence Length = 719 Score = 125 bits (63), Expect = 2e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 162 caagaaggtcttctccctcaccggccagaagttcgaaacaccagaggagagggagcccct 221 ||||||||||| |||| | |||||||||||||||| | || |||||||||||||| || Sbjct: 322 caagaaggtctactccttgcccggccagaagttcgatcctccggaggagagggagcctct 381 Query: 222 caggatcttctacgaatcgctctccaagcagatcccatccagcgagatggcccaattctg 281 |||||| |||||||| || || |||||||||||||| ||||| |||||||| ||||||| Sbjct: 382 caggattttctacgagtcactgtccaagcagatcccctccagtgagatggctgaattctg 441 Query: 282 gttaatggagcatgggctgctatctccggaaagagcaaagcaagcctacgacaggaagct 341 ||| ||||||||||| || | ||||| || ||||||| | | || || || ||||||| Sbjct: 442 gttgatggagcatggtatgttgtctcctgagagagcaaggaaggcatatgaaaggaagca 501 Query: 342 caaacggcagcagca 356 || ||||||||||| Sbjct: 502 aaagcggcagcagca 516
>ref|XM_476038.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 495 Score = 99.6 bits (50), Expect = 9e-18 Identities = 140/170 (82%) Strand = Plus / Plus Query: 163 aagaaggtcttctccctcaccggccagaagttcgaaacaccagaggagagggagcccctc 222 |||||||||| ||| || | |||||||| ||||| | || |||||||| ||||| ||| Sbjct: 136 aagaaggtctactcgctgccaggccagaaattcgacccccctgaggagagagagcctctc 195 Query: 223 aggatcttctacgaatcgctctccaagcagatcccatccagcgagatggcccaattctgg 282 ||||| |||||||| || | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 196 aggatattctacgagtccttatccaagcagataccctccagtgagatggctgaattctgg 255 Query: 283 ttaatggagcatgggctgctatctccggaaagagcaaagcaagcctacga 332 || ||||| || ||| || ||||||| |||||||||||| |||| ||||| Sbjct: 256 ttgatggaacacgggttgttatctcccgaaagagcaaagaaagcatacga 305
>dbj|AK108209.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D08, full insert sequence Length = 934 Score = 99.6 bits (50), Expect = 9e-18 Identities = 140/170 (82%) Strand = Plus / Plus Query: 163 aagaaggtcttctccctcaccggccagaagttcgaaacaccagaggagagggagcccctc 222 |||||||||| ||| || | |||||||| ||||| | || |||||||| ||||| ||| Sbjct: 318 aagaaggtctactcgctgccaggccagaaattcgacccccctgaggagagagagcctctc 377 Query: 223 aggatcttctacgaatcgctctccaagcagatcccatccagcgagatggcccaattctgg 282 ||||| |||||||| || | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 378 aggatattctacgagtccttatccaagcagataccctccagtgagatggctgaattctgg 437 Query: 283 ttaatggagcatgggctgctatctccggaaagagcaaagcaagcctacga 332 || ||||| || ||| || ||||||| |||||||||||| |||| ||||| Sbjct: 438 ttgatggaacacgggttgttatctcccgaaagagcaaagaaagcatacga 487
>dbj|AK107887.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E01, full insert sequence Length = 509 Score = 97.6 bits (49), Expect = 3e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 163 aagaaggtcttctccctcaccggccagaagttcgaaacaccagaggagagggagcccctc 222 |||||||||| ||| || | |||||||| ||||| | || |||||||| ||||| ||| Sbjct: 341 aagaaggtctactcgctgccaggccagaaattcgacccccctgaggagagagagcctctc 400 Query: 223 aggatcttctacgaatcgctctccaagcagatcccatccagcgagatggcccaattctgg 282 ||||| |||||||| || | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 401 aggatattctacgagtccttatccaagcagataccctccagtgagatggctgaattctgg 460 Query: 283 ttaatggagcatgggctgctatctccggaaagagcaaagcaagcctacg 331 || ||||| || ||| || ||||||| |||||||||||| |||| |||| Sbjct: 461 ttgatggaacacgggttgttatctcccgaaagagcaaagaaagcatacg 509
>dbj|AK062521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-D04, full insert sequence Length = 943 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 163 aagaaggtcttctccctcaccggccagaagttcgaaacaccagaggagagggagcccctc 222 |||||||||| ||| || | |||||||| ||||| | || |||||||| ||||| ||| Sbjct: 327 aagaaggtctactcgctgccaggccagaaattcgacccccctgaggagagagagcctctc 386 Query: 223 aggatcttctacgaatcgctctccaagcagatcccatccagcgagatggcccaattctgg 282 ||||| |||||||| || | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 387 aggatattctacgagtccttatccaagcagataccctccagtgagatggctgaattctgg 446 Query: 283 t 283 | Sbjct: 447 t 447 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 281 ggttaatggagcatgggctgctatctccggaaagagcaaagcaagcctacga 332 |||| ||||| || ||| || ||||||| |||||||||||| |||| ||||| Sbjct: 883 ggttgatggaacacgggttgttatctcccgaaagagcaaagaaagcatacga 934
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 209 agagggagcccctcaggatcttctacgaatcgctctccaagcagatcccatccagcgaga 268 |||| ||||| |||||||| |||||||| || | ||||||||||| || ||||| |||| Sbjct: 121736 agagagagcctctcaggatattctacgagtccttatccaagcagataccctccagtgaga 121677 Query: 269 tggcccaattctggt 283 |||| ||||||||| Sbjct: 121676 tggctgaattctggt 121662 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 281 ggttaatggagcatgggctgctatctccggaaagagcaaagcaagcctacga 332 |||| ||||| || ||| || ||||||| |||||||||||| |||| ||||| Sbjct: 121226 ggttgatggaacacgggttgttatctcccgaaagagcaaagaaagcatacga 121175
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 209 agagggagcccctcaggatcttctacgaatcgctctccaagcagatcccatccagcgaga 268 |||| ||||| |||||||| |||||||| || | ||||||||||| || ||||| |||| Sbjct: 29473711 agagagagcctctcaggatattctacgagtccttatccaagcagataccctccagtgaga 29473652 Query: 269 tggcccaattctggt 283 |||| ||||||||| Sbjct: 29473651 tggctgaattctggt 29473637 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 281 ggttaatggagcatgggctgctatctccggaaagagcaaagcaagcctacga 332 |||| ||||| || ||| || ||||||| |||||||||||| |||| ||||| Sbjct: 29473201 ggttgatggaacacgggttgttatctcccgaaagagcaaagaaagcatacga 29473150
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 209 agagggagcccctcaggatcttctacgaatcgctctccaagcagatcccatccagcgaga 268 |||| ||||| |||||||| |||||||| || | ||||||||||| || ||||| |||| Sbjct: 57981 agagagagcctctcaggatattctacgagtccttatccaagcagataccctccagtgaga 57922 Query: 269 tggcccaattctggt 283 |||| ||||||||| Sbjct: 57921 tggctgaattctggt 57907 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 281 ggttaatggagcatgggctgctatctccggaaagagcaaagcaagcctacga 332 |||| ||||| || ||| || ||||||| |||||||||||| |||| ||||| Sbjct: 57471 ggttgatggaacacgggttgttatctcccgaaagagcaaagaaagcatacga 57420
>emb|CR769763.8| Zebrafish DNA sequence from clone CH211-200N13 in linkage group 11, complete sequence Length = 102709 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 337 aagctcaaacggcagcagcagatc 360 |||||||||||||||||||||||| Sbjct: 35768 aagctcaaacggcagcagcagatc 35745
>gb|DQ023263.1| Macaca mulatta 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 40709 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcca 118 ||||||||||||||||||||||| Sbjct: 21614 cgccgcggccaccgccaccgcca 21592
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 93 gctcgccgcggccaccgccaccg 115 ||||||||||||||||||||||| Sbjct: 2121376 gctcgccgcggccaccgccaccg 2121354
>ref|XM_523654.1| PREDICTED: Pan troglodytes alpha-N-acetylglucosaminidase (LOC468265), mRNA Length = 1917 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 27 cgccgcggccaccgccaccgcc 6
>ref|XM_473887.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3105 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 373 cgccgcggccaccgccaccgcc 352 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gccgcggccaccgccaccgc 116 |||||||||||||||||||| Sbjct: 33 gccgcggccaccgccaccgc 14
>ref|NM_195283.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0040E17.29), mRNA Length = 1764 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 639 cgccgcggccaccgccaccgcc 618
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 95177 cgccgcggccaccgccaccgcc 95156 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gccgcggccaccgccaccgc 116 |||||||||||||||||||| Sbjct: 94837 gccgcggccaccgccaccgc 94818
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 127701 cgccgcggccaccgccaccgcc 127722
>gb|DQ023266.1| Pan troglodytes HSD17B1P pseudogene, complete sequence; and 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 200028 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 29237 cgccgcggccaccgccaccgcc 29216
>gb|DQ023265.1| Hylobates klossii HSD17B1P pseudogene, complete sequence; and 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 46648 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 5782 cgccgcggccaccgccaccgcc 5761
>ref|NM_000263.3| Homo sapiens N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB) (NAGLU), mRNA Length = 2798 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 367 cgccgcggccaccgccaccgcc 346
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 31273575 cgccgcggccaccgccaccgcc 31273554 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gccgcggccaccgccaccgc 116 |||||||||||||||||||| Sbjct: 31273235 gccgcggccaccgccaccgc 31273216 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gctcgccgcggccaccgccaccgc 116 ||||||||| |||||||||||||| Sbjct: 24030176 gctcgccgccgccaccgccaccgc 24030199 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcc 117 |||||||||||||||||||| Sbjct: 6665564 ccgcggccaccgccaccgcc 6665583 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 agctcgccgcggccaccgcc 111 |||||||||||||||||||| Sbjct: 4704927 agctcgccgcggccaccgcc 4704908
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 18349581 cgccgcggccaccgccaccgcc 18349560 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 25590962 ctcgccgccgccaccgccaccgcc 25590939 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 20441586 ctcgccgccgccaccgccaccgcc 20441563
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 5938612 cgccgcggccaccgccaccgcc 5938591 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 11471038 ccgcggccaccgccaccgcca 11471058
>gb|AC067852.23| Homo sapiens chromosome 17, clone RP11-400F19, complete sequence Length = 179146 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 141729 cgccgcggccaccgccaccgcc 141750
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 4987487 cgccgcggccaccgccaccgcc 4987508
>dbj|AK120766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007L18, full insert sequence Length = 3476 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 473 cgccgcggccaccgccaccgcc 452 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gccgcggccaccgccaccgc 116 |||||||||||||||||||| Sbjct: 133 gccgcggccaccgccaccgc 114
>gb|BC053991.1| Homo sapiens N-acetylglucosaminidase, alpha- (Sanfilippo disease IIIB), mRNA (cDNA clone MGC:59849 IMAGE:6213852), complete cds Length = 2502 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 50 cgccgcggccaccgccaccgcc 29
>gb|U34879.1|HSU34879 Human 17-beta-hydroxysteroid dehydrogenase (EDH17B2) gene, complete cds Length = 46610 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 10976 cgccgcggccaccgccaccgcc 10955
>gb|U43573.1|HSU43573 Human alpha-N-acetylglucosaminidase (NAGLU) mRNA, complete cds Length = 2458 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 27 cgccgcggccaccgccaccgcc 6
>gb|U43572.1|HSU43572 Human alpha-N-acetylglucosaminidase (NAGLU) gene, complete cds Length = 10127 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 1443 cgccgcggccaccgccaccgcc 1422
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 5939798 cgccgcggccaccgccaccgcc 5939777 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 11477478 ccgcggccaccgccaccgcca 11477498
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 18275902 cgccgcggccaccgccaccgcc 18275881 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 25519138 ctcgccgccgccaccgccaccgcc 25519115 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 20367800 ctcgccgccgccaccgccaccgcc 20367777
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 21413 cgccgcggccaccgccaccgcc 21434
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 1482 cgccgcggccaccgccaccgcc 1461
>gb|AC140403.3| Mus musculus BAC clone RP23-144M22 from 15, complete sequence Length = 192144 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 aacaccagaggagagggagcccctca 223 |||| ||||||||||||||||||||| Sbjct: 48693 aacagcagaggagagggagcccctca 48718
>gb|L78464.1|HUMUFHS Human alpha-N-acetylglucosaminidase (ufHSD1) mRNA, complete cds Length = 2446 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 33 cgccgcggccaccgccaccgcc 12
>gb|U40846.1|HSU40846 Human alpha-N-acetylglucosaminidase (NAG) mRNA, complete cds Length = 2575 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccgcc 117 |||||||||||||||||||||| Sbjct: 128 cgccgcggccaccgccaccgcc 107
>ref|NM_184794.1| Oryza sativa (japonica cultivar-group), mRNA Length = 879 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tcgccgcggccaccgccaccg 115 ||||||||||||||||||||| Sbjct: 64 tcgccgcggccaccgccaccg 44
>ref|NM_196155.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0095C06.6), mRNA Length = 432 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 385 ccgcggccaccgccaccgcca 365
>ref|XM_369191.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00053.4) partial mRNA Length = 2283 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 caagggcaaggcggccaagaa 167 ||||||||||||||||||||| Sbjct: 1857 caagggcaaggcggccaagaa 1877
>gb|BC004907.2| Homo sapiens EPS8-like 1, transcript variant 3, mRNA (cDNA clone MGC:4642 IMAGE:3529476), complete cds Length = 2160 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 aggcagcctgtcctccttctccagg 33 ||||||||||||||||| ||||||| Sbjct: 83 aggcagcctgtcctcctcctccagg 107
>ref|NM_139204.1| Homo sapiens EPS8-like 1 (EPS8L1), transcript variant 3, mRNA Length = 2162 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 aggcagcctgtcctccttctccagg 33 ||||||||||||||||| ||||||| Sbjct: 83 aggcagcctgtcctcctcctccagg 107
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tcgccgcggccaccgccaccg 115 ||||||||||||||||||||| Sbjct: 22107940 tcgccgcggccaccgccaccg 22107960 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 3628802 ccgcggccaccgccaccgcca 3628822 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 ccaagggcaaggcggccaagaagg 169 ||||| |||||||||||||||||| Sbjct: 24115292 ccaagagcaaggcggccaagaagg 24115269
>ref|XM_807073.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510305.50) partial mRNA Length = 5778 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gccaccgccaccgccaagaaa 123 ||||||||||||||||||||| Sbjct: 5205 gccaccgccaccgccaagaaa 5185
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 aaggccaagggcaaggcggcc 162 ||||||||||||||||||||| Sbjct: 3778798 aaggccaagggcaaggcggcc 3778818
>emb|X55693.1|LEEXTEN13 Tomato mRNA for a glycine-rich protein (clone w10-1) Length = 402 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 356 ccgcggccaccgccaccgcca 336
>gb|AC011476.8| Homo sapiens chromosome 19 clone CTC-550B14, complete sequence Length = 187064 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 aggcagcctgtcctccttctccagg 33 ||||||||||||||||| ||||||| Sbjct: 174848 aggcagcctgtcctcctcctccagg 174872
>dbj|AK093429.1| Homo sapiens cDNA FLJ36110 fis, clone TESTI2021939 Length = 1686 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gccgcggccaccgccaccgcc 117 ||||||||||||||||||||| Sbjct: 1032 gccgcggccaccgccaccgcc 1052
>dbj|AK001399.1| Homo sapiens cDNA FLJ10537 fis, clone NT2RP2001119 Length = 2361 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ggaaggccaagggcaaggcgg 160 ||||||||||||||||||||| Sbjct: 994 ggaaggccaagggcaaggcgg 974
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 152575 ccgcggccaccgccaccgcca 152555
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 55031 ccgcggccaccgccaccgcca 55051
>gb|AC068234.8| Homo sapiens chromosome 17, clone RP11-290H9, complete sequence Length = 174566 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gccgcggccaccgccaccgcc 117 ||||||||||||||||||||| Sbjct: 66590 gccgcggccaccgccaccgcc 66610
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 gctcgccgcggccaccgccaccgcc 117 ||||||||| ||||||||||||||| Sbjct: 7875396 gctcgccgccgccaccgccaccgcc 7875372
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tcgccgcggccaccgccaccg 115 ||||||||||||||||||||| Sbjct: 22100969 tcgccgcggccaccgccaccg 22100989 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 3628913 ccgcggccaccgccaccgcca 3628933 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 ccaagggcaaggcggccaagaagg 169 ||||| |||||||||||||||||| Sbjct: 24032357 ccaagagcaaggcggccaagaagg 24032334
>gb|AC048338.29| Homo sapiens 12 BAC RP11-512M8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186945 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ggaaggccaagggcaaggcgg 160 ||||||||||||||||||||| Sbjct: 105671 ggaaggccaagggcaaggcgg 105651
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tcgccgcggccaccgccaccg 115 ||||||||||||||||||||| Sbjct: 40342 tcgccgcggccaccgccaccg 40322
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tcgccgcggccaccgccaccg 115 ||||||||||||||||||||| Sbjct: 116922 tcgccgcggccaccgccaccg 116902
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 146455 ccgcggccaccgccaccgcca 146475
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0090H20 Length = 132628 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 gctcgccgcggccaccgccaccgcc 117 ||||||||| ||||||||||||||| Sbjct: 106683 gctcgccgccgccaccgccaccgcc 106659
>dbj|AP005410.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0038P10 Length = 148527 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 gctcgccgcggccaccgccaccgcc 117 ||||||||| ||||||||||||||| Sbjct: 65287 gctcgccgccgccaccgccaccgcc 65263
>emb|X55694.1|LEEXTEN14 Tomato extensin mRNA (clone w10-1 L) Length = 402 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 47 ccgcggccaccgccaccgcca 67
>emb|X55692.1|LEEXTEN12 Tomato extensin mRNA (clone w1-8 L) Length = 619 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 218 ccgcggccaccgccaccgcca 238
>emb|X55691.1|LEEXTEN11 Tomato mRNA for a glycine-rich protein (clone w1-8) Length = 619 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 402 ccgcggccaccgccaccgcca 382
>emb|X55690.1|LEEXTEN10 Tomato mRNA for a glycine-rich protein (clone uE-7) Length = 385 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 132 ccgcggccaccgccaccgcca 112
>emb|X55689.1|LEEXTEN9 Tomato mRNA for a glycine-rich protein (clone wN) Length = 586 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 333 ccgcggccaccgccaccgcca 313
>emb|X55688.1|LEEXTEN8 Tomato mRNA for a glycine-rich protein (clone wM) Length = 693 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 441 ccgcggccaccgccaccgcca 421
>ref|XM_563948.1| Anopheles gambiae str. PEST ENSANGP00000028566 (ENSANGG00000010039), partial mRNA Length = 1611 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gcggccaccgccaccgccaag 120 ||||||||||||||||||||| Sbjct: 699 gcggccaccgccaccgccaag 719
>dbj|AK070468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D05, full insert sequence Length = 2146 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcca 118 ||||||||||||||||||||| Sbjct: 111 ccgcggccaccgccaccgcca 131
>gb|BC044604.1| Homo sapiens chromosome 17 open reading frame 57, mRNA (cDNA clone IMAGE:4817444), with apparent retained intron Length = 1488 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 gccgcggccaccgccaccgcc 117 ||||||||||||||||||||| Sbjct: 77 gccgcggccaccgccaccgcc 57
>ref|NM_193983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 1386 ctcgccgccgccaccgccaccgcc 1409
>ref|XM_468974.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1559 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ccaagggcaaggcggccaagaagg 169 ||||| |||||||||||||||||| Sbjct: 81 ccaagagcaaggcggccaagaagg 104
>ref|XM_472909.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1665 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gctcgccgcggccaccgccaccgc 116 ||||||||| |||||||||||||| Sbjct: 45 gctcgccgccgccaccgccaccgc 68
>ref|XM_866545.1| PREDICTED: Bos taurus similar to Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3) (LOC614900), mRNA Length = 2709 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcc 117 |||||||||||||||||||| Sbjct: 2342 ccgcggccaccgccaccgcc 2361
>gb|AC166827.2| Mus musculus BAC clone RP23-359M9 from chromosome 12, complete sequence Length = 219729 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 caggaagctcaaacggcagcagca 356 ||||||||||| |||||||||||| Sbjct: 150545 caggaagctcacacggcagcagca 150568
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ccaagggcaaggcggccaagaagg 169 ||||| |||||||||||||||||| Sbjct: 108540 ccaagagcaaggcggccaagaagg 108563
>gb|AY186602.1| Chlamydomonas reinhardtii long flagella (LF3) gene, complete cds Length = 7467 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 gccgcggccaccgccaccgccaag 120 ||||| |||||||||||||||||| Sbjct: 2787 gccgccgccaccgccaccgccaag 2764
>gb|AY162971.1| Micromonospora chersina dynemicin enediyne iterative type I polyketide synthase gene locus, partial sequence Length = 6653 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccg 115 |||||||||||||||||||| Sbjct: 4534 cgccgcggccaccgccaccg 4515
>emb|CR974413.1| M.murinus DNA sequence from clone CH257-4B4, complete sequence Length = 270722 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cagcctgtcctccttctcca 31 |||||||||||||||||||| Sbjct: 246697 cagcctgtcctccttctcca 246716
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 agctcgccgcggccaccgcc 111 |||||||||||||||||||| Sbjct: 95060 agctcgccgcggccaccgcc 95041
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccgcggccaccgccaccgcc 117 |||||||||||||||||||| Sbjct: 86520 ccgcggccaccgccaccgcc 86539
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gctcgccgcggccaccgccaccgc 116 ||||||||| |||||||||||||| Sbjct: 27155 gctcgccgccgccaccgccaccgc 27178
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 cgccgcggccaccgccaccgccaa 119 |||||||||||||||||| ||||| Sbjct: 2866979 cgccgcggccaccgccacggccaa 2867002
>gb|AC008453.6| Homo sapiens chromosome 5 clone CTC-345K18, complete sequence Length = 145064 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 96091 ctcgccgccgccaccgccaccgcc 96114
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tcgccgcggccaccgccacc 114 |||||||||||||||||||| Sbjct: 3516421 tcgccgcggccaccgccacc 3516440
>dbj|AB169068.1| Macaca fascicularis testis cDNA, clone: QtsA-17009, similar to human chromosome 14 open reading frame 9 (C14orf9), mRNA, RefSeq: NM_144568.1 Length = 1576 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 tcgccgcggccaccgccaccgcca 118 ||||||| |||||||||||||||| Sbjct: 52 tcgccgcagccaccgccaccgcca 29
>gb|AY155576.1| Bordetella avium strain 197N ABC transporter gene, partial cds; and adhesin FhaB (fhaB), complete cds; fimbrial gene cluster, complete sequence; and FHA accessory protein FhaC (fhaC) gene, complete cds Length = 16356 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 tcgccgcggccaccgccaccgcca 118 ||||||| |||||||||||||||| Sbjct: 7911 tcgccgccgccaccgccaccgcca 7934
>gb|AC116574.6| Mus musculus BAC clone RP23-234F20 from chromosome 12, complete sequence Length = 191808 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 caggaagctcaaacggcagcagca 356 ||||||||||| |||||||||||| Sbjct: 77985 caggaagctcacacggcagcagca 78008
>gb|AF113013.1|AF113013 Homo sapiens PRO0806 mRNA, complete cds Length = 851 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 accagaggagagggagcccc 220 |||||||||||||||||||| Sbjct: 92 accagaggagagggagcccc 73
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgcggccaccgccaccgcca 118 |||||||||||||||||||| Sbjct: 10403569 cgcggccaccgccaccgcca 10403588
>gb|AC092135.4| Homo sapiens chromosome 16 clone RP11-274A11, complete sequence Length = 185193 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 accagaggagagggagcccc 220 |||||||||||||||||||| Sbjct: 178808 accagaggagagggagcccc 178827
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgcggccaccgccaccgcca 118 |||||||||||||||||||| Sbjct: 27542589 cgcggccaccgccaccgcca 27542608 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 14421089 ctcgccgccgccaccgccaccgcc 14421066
>gb|AC092139.5| Homo sapiens chromosome 16 clone RP11-391L3, complete sequence Length = 191731 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 accagaggagagggagcccc 220 |||||||||||||||||||| Sbjct: 68245 accagaggagagggagcccc 68264
>gb|AF546156.1| Micromonospora chersinia UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10136 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgccgcggccaccgccaccg 115 |||||||||||||||||||| Sbjct: 7765 cgccgcggccaccgccaccg 7746
>gb|DQ072862.1| Uncultured bacterium clone A4 16S ribosomal RNA gene, partial sequence Length = 772 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gggcaaggcggccaagaagg 169 |||||||||||||||||||| Sbjct: 753 gggcaaggcggccaagaagg 734
>dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1125_C04 Length = 98476 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgcggccaccgccaccgcca 118 |||||||||||||||||||| Sbjct: 63292 cgcggccaccgccaccgcca 63311
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgcggccaccgccaccgcca 118 |||||||||||||||||||| Sbjct: 9883 cgcggccaccgccaccgcca 9902
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgcggccaccgccaccgcca 118 |||||||||||||||||||| Sbjct: 111274 cgcggccaccgccaccgcca 111293
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgcggccaccgccaccgcca 118 |||||||||||||||||||| Sbjct: 3948 cgcggccaccgccaccgcca 3967
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 82486 ctcgccgccgccaccgccaccgcc 82463
>dbj|AK111510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I04, full insert sequence Length = 1560 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ccaagggcaaggcggccaagaagg 169 ||||| |||||||||||||||||| Sbjct: 82 ccaagagcaaggcggccaagaagg 105
>dbj|AK109889.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-E03, full insert sequence Length = 1992 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gctcgccgcggccaccgccaccgc 116 ||||||||| |||||||||||||| Sbjct: 55 gctcgccgccgccaccgccaccgc 78
>dbj|AK108664.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G02, full insert sequence Length = 1469 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 29 ctcgccgccgccaccgccaccgcc 52
>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full insert sequence Length = 1799 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 1479 ctcgccgccgccaccgccaccgcc 1502
>gb|AY106030.1| Zea mays PCO144919 mRNA sequence Length = 423 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cgcggccaccgccaccgcca 118 |||||||||||||||||||| Sbjct: 22 cgcggccaccgccaccgcca 41
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgcggccaccgccaccgcc 117 |||||||||||||||||||| Sbjct: 4559734 ccgcggccaccgccaccgcc 4559715
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 82756 ctcgccgccgccaccgccaccgcc 82779
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ctcgccgcggccaccgccaccgcc 117 |||||||| ||||||||||||||| Sbjct: 70115 ctcgccgccgccaccgccaccgcc 70138
>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete sequence Length = 222330 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 agcctgtcctccttctccag 32 |||||||||||||||||||| Sbjct: 90650 agcctgtcctccttctccag 90669 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,019,783 Number of Sequences: 3902068 Number of extensions: 4019783 Number of successful extensions: 96618 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94098 Number of HSP's gapped (non-prelim): 2519 length of query: 521 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 498 effective length of database: 17,143,297,704 effective search space: 8537362256592 effective search space used: 8537362256592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
