Clone Name | basdf06 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_464885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 919 Score = 256 bits (129), Expect = 6e-65 Identities = 207/233 (88%) Strand = Plus / Plus Query: 242 agaggatgccgcggttccggagcctgttgaggtgcagctggctgctgctggcgcggggaa 301 |||||| || ||||| ||||||||||| |||| |||| | || || || ||||| ||||| Sbjct: 245 agaggaggctgcggtgccggagcctgtggaggcgcagatcgcagccgcgggcgccgggaa 304 Query: 302 ggatgccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccgg 361 ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || Sbjct: 305 ggacgccgacatcttcgccgttgtcatgattgggtcgagacagtacattgtgatgcctgg 364 Query: 362 tcggtatatatacacgcagaggctgaaagacgccaatgtcaatgatcagatcattttgaa 421 ||||||||||||||||||||||||||| ||||||||||||||||||||| || || || Sbjct: 365 aaggtatatatacacgcagaggctgaaaggcgccaatgtcaatgatcagataatattaaa 424 Query: 422 caaggtactactagtgtcaactagagacaaagcttatattggcatgccagtgg 474 ||||||| |||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 425 caaggtattactggtatcaactagagacaaggcttacattggcatgccagtgg 477 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 47 ccgcgccccgtccatggccaccgccacgctccctctccgcctcctcccctccagaaccc 105 |||||| ||| ||||||||||||| ||||| || |||||||||||| |||||| ||||| Sbjct: 17 ccgcgcgccggccatggccaccgcgacgctgcccctccgcctcctcgcctccaaaaccc 75
>ref|XM_506768.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0060K08.25 mRNA Length = 940 Score = 256 bits (129), Expect = 6e-65 Identities = 207/233 (88%) Strand = Plus / Plus Query: 242 agaggatgccgcggttccggagcctgttgaggtgcagctggctgctgctggcgcggggaa 301 |||||| || ||||| ||||||||||| |||| |||| | || || || ||||| ||||| Sbjct: 266 agaggaggctgcggtgccggagcctgtggaggcgcagatcgcagccgcgggcgccgggaa 325 Query: 302 ggatgccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccgg 361 ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || Sbjct: 326 ggacgccgacatcttcgccgttgtcatgattgggtcgagacagtacattgtgatgcctgg 385 Query: 362 tcggtatatatacacgcagaggctgaaagacgccaatgtcaatgatcagatcattttgaa 421 ||||||||||||||||||||||||||| ||||||||||||||||||||| || || || Sbjct: 386 aaggtatatatacacgcagaggctgaaaggcgccaatgtcaatgatcagataatattaaa 445 Query: 422 caaggtactactagtgtcaactagagacaaagcttatattggcatgccagtgg 474 ||||||| |||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 446 caaggtattactggtatcaactagagacaaggcttacattggcatgccagtgg 498 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 47 ccgcgccccgtccatggccaccgccacgctccctctccgcctcctcccctccagaaccc 105 |||||| ||| ||||||||||||| ||||| || |||||||||||| |||||| ||||| Sbjct: 38 ccgcgcgccggccatggccaccgcgacgctgcccctccgcctcctcgcctccaaaaccc 96
>dbj|AK104384.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D06, full insert sequence Length = 919 Score = 256 bits (129), Expect = 6e-65 Identities = 207/233 (88%) Strand = Plus / Plus Query: 242 agaggatgccgcggttccggagcctgttgaggtgcagctggctgctgctggcgcggggaa 301 |||||| || ||||| ||||||||||| |||| |||| | || || || ||||| ||||| Sbjct: 245 agaggaggctgcggtgccggagcctgtggaggcgcagatcgcagccgcgggcgccgggaa 304 Query: 302 ggatgccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccgg 361 ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || Sbjct: 305 ggacgccgacatcttcgccgttgtcatgattgggtcgagacagtacattgtgatgcctgg 364 Query: 362 tcggtatatatacacgcagaggctgaaagacgccaatgtcaatgatcagatcattttgaa 421 ||||||||||||||||||||||||||| ||||||||||||||||||||| || || || Sbjct: 365 aaggtatatatacacgcagaggctgaaaggcgccaatgtcaatgatcagataatattaaa 424 Query: 422 caaggtactactagtgtcaactagagacaaagcttatattggcatgccagtgg 474 ||||||| |||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 425 caaggtattactggtatcaactagagacaaggcttacattggcatgccagtgg 477 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 47 ccgcgccccgtccatggccaccgccacgctccctctccgcctcctcccctccagaaccc 105 |||||| ||| ||||||||||||| ||||| || |||||||||||| |||||| ||||| Sbjct: 17 ccgcgcgccggccatggccaccgcgacgctgcccctccgcctcctcgcctccaaaaccc 75
>dbj|AK064863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I04, full insert sequence Length = 940 Score = 256 bits (129), Expect = 6e-65 Identities = 207/233 (88%) Strand = Plus / Plus Query: 242 agaggatgccgcggttccggagcctgttgaggtgcagctggctgctgctggcgcggggaa 301 |||||| || ||||| ||||||||||| |||| |||| | || || || ||||| ||||| Sbjct: 266 agaggaggctgcggtgccggagcctgtggaggcgcagatcgcagccgcgggcgccgggaa 325 Query: 302 ggatgccgacatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccgg 361 ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || Sbjct: 326 ggacgccgacatcttcgccgttgtcatgattgggtcgagacagtacattgtgatgcctgg 385 Query: 362 tcggtatatatacacgcagaggctgaaagacgccaatgtcaatgatcagatcattttgaa 421 ||||||||||||||||||||||||||| ||||||||||||||||||||| || || || Sbjct: 386 aaggtatatatacacgcagaggctgaaaggcgccaatgtcaatgatcagataatattaaa 445 Query: 422 caaggtactactagtgtcaactagagacaaagcttatattggcatgccagtgg 474 ||||||| |||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 446 caaggtattactggtatcaactagagacaaggcttacattggcatgccagtgg 498 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 47 ccgcgccccgtccatggccaccgccacgctccctctccgcctcctcccctccagaaccc 105 |||||| ||| ||||||||||||| ||||| || |||||||||||| |||||| ||||| Sbjct: 38 ccgcgcgccggccatggccaccgcgacgctgcccctccgcctcctcgcctccaaaaccc 96
>gb|AY104304.1| Zea mays PCO077438 mRNA sequence Length = 963 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 250 ccgcggttccggagcctgttgaggtgcagctggctgctgctggcgcggggaaggatgccg 309 ||||||| |||||||| || |||| |||||| || || || || || |||||||| |||| Sbjct: 280 ccgcggtaccggagcccgtagaggcgcagctcgccgccgcgggggctgggaaggacgccg 339 Query: 310 acatcttcgccgttgtcatgattgggtccagacaatacattgtgatgcccggtcggtata 369 |||||||||| |||||||||||||| || |||||||||||||||||||| || |||||| Sbjct: 340 acatcttcgctgttgtcatgattggttcaagacaatacattgtgatgccgggcaggtata 399 Query: 370 tatacacgcagaggctgaaagacgccaatgtcaatgatcagatcattttgaacaaggtac 429 ||||||| ||||| ||||||| ||||||||||||||||||||||| || |||||||| | Sbjct: 400 tatacacacagagactgaaaggtgccaatgtcaatgatcagatcatattaaacaaggtgc 459 Query: 430 tactagtgtcaactagagacaaagcttatattggcatgccagtgg 474 |||| |||||||||||||| |||||||| ||||| |||||||||| Sbjct: 460 tactggtgtcaactagagaaaaagcttacattgggatgccagtgg 504
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 329 gattgggtccagacaatacattgtgatgcccggtcggtatatatacacgcagaggctgaa 388 ||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 9005762 gattgggtcgagacagtacattgtgatgcctggaaggtatatatacacgcagaggctgaa 9005703 Query: 389 agacgccaatgtcaatgatcag 410 || ||||||||||||||||||| Sbjct: 9005702 aggcgccaatgtcaatgatcag 9005681 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 242 agaggatgccgcggttccggagcctgttgaggtgcagctggctgctgctggcgcggggaa 301 |||||| || ||||| ||||||||||| |||| |||| | || || || ||||| ||||| Sbjct: 9006320 agaggaggctgcggtgccggagcctgtggaggcgcagatcgcagccgcgggcgccgggaa 9006261 Query: 302 ggatgccgacatcttcgccgttgtcatg 329 ||| |||||||||||||||||||||||| Sbjct: 9006260 ggacgccgacatcttcgccgttgtcatg 9006233 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 420 aacaaggtactactagtgtcaactagagacaaagcttatattggcatgccagtgg 474 ||||||||| |||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 9005123 aacaaggtattactggtatcaactagagacaaggcttacattggcatgccagtgg 9005069 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 47 ccgcgccccgtccatggccaccgccacgctccctctccgcctcctcccctccagaaccc 105 |||||| ||| ||||||||||||| ||||| || |||||||||||| |||||| ||||| Sbjct: 9006548 ccgcgcgccggccatggccaccgcgacgctgcccctccgcctcctcgcctccaaaaccc 9006490 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cgctccctctccgcctcctcccct 96 |||||||||||| ||||||||||| Sbjct: 3832083 cgctccctctcctcctcctcccct 3832106 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccactcctccacgccgccgc 124 |||||||||||||||||||| Sbjct: 564430 ccactcctccacgccgccgc 564411
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 329 gattgggtccagacaatacattgtgatgcccggtcggtatatatacacgcagaggctgaa 388 ||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 46208 gattgggtcgagacagtacattgtgatgcctggaaggtatatatacacgcagaggctgaa 46149 Query: 389 agacgccaatgtcaatgatcag 410 || ||||||||||||||||||| Sbjct: 46148 aggcgccaatgtcaatgatcag 46127 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 242 agaggatgccgcggttccggagcctgttgaggtgcagctggctgctgctggcgcggggaa 301 |||||| || ||||| ||||||||||| |||| |||| | || || || ||||| ||||| Sbjct: 46766 agaggaggctgcggtgccggagcctgtggaggcgcagatcgcagccgcgggcgccgggaa 46707 Query: 302 ggatgccgacatcttcgccgttgtcatg 329 ||| |||||||||||||||||||||||| Sbjct: 46706 ggacgccgacatcttcgccgttgtcatg 46679 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 420 aacaaggtactactagtgtcaactagagacaaagcttatattggcatgccagtgg 474 ||||||||| |||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 45569 aacaaggtattactggtatcaactagagacaaggcttacattggcatgccagtgg 45515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 47 ccgcgccccgtccatggccaccgccacgctccctctccgcctcctcccctccagaaccc 105 |||||| ||| ||||||||||||| ||||| || |||||||||||| |||||| ||||| Sbjct: 46994 ccgcgcgccggccatggccaccgcgacgctgcccctccgcctcctcgcctccaaaaccc 46936
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 329 gattgggtccagacaatacattgtgatgcccggtcggtatatatacacgcagaggctgaa 388 ||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 78371 gattgggtcgagacagtacattgtgatgcctggaaggtatatatacacgcagaggctgaa 78312 Query: 389 agacgccaatgtcaatgatcag 410 || ||||||||||||||||||| Sbjct: 78311 aggcgccaatgtcaatgatcag 78290 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 242 agaggatgccgcggttccggagcctgttgaggtgcagctggctgctgctggcgcggggaa 301 |||||| || ||||| ||||||||||| |||| |||| | || || || ||||| ||||| Sbjct: 78929 agaggaggctgcggtgccggagcctgtggaggcgcagatcgcagccgcgggcgccgggaa 78870 Query: 302 ggatgccgacatcttcgccgttgtcatg 329 ||| |||||||||||||||||||||||| Sbjct: 78869 ggacgccgacatcttcgccgttgtcatg 78842 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 420 aacaaggtactactagtgtcaactagagacaaagcttatattggcatgccagtgg 474 ||||||||| |||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 77732 aacaaggtattactggtatcaactagagacaaggcttacattggcatgccagtgg 77678 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 47 ccgcgccccgtccatggccaccgccacgctccctctccgcctcctcccctccagaaccc 105 |||||| ||| ||||||||||||| ||||| || |||||||||||| |||||| ||||| Sbjct: 79157 ccgcgcgccggccatggccaccgcgacgctgcccctccgcctcctcgcctccaaaaccc 79099
>dbj|AK062182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-D10, full insert sequence Length = 543 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 438 tcaactagagacaaagcttatattggcatgccagtgg 474 |||||||||||||| ||||| |||||||||||||||| Sbjct: 3 tcaactagagacaaggcttacattggcatgccagtgg 39
>gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, complete sequence Length = 174714 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 129 ctccctgcgagcacctccctctccttaa 156 ||||||| |||||||||||||||||||| Sbjct: 7042 ctccctgggagcacctccctctccttaa 7015
>gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, complete sequence Length = 180623 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 129 ctccctgcgagcacctccctctccttaa 156 ||||||| |||||||||||||||||||| Sbjct: 98376 ctccctgggagcacctccctctccttaa 98349
>ref|XM_462668.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1374 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 cgccacgctccctctccgcctcctcc 93 |||||||||||| ||||||||||||| Sbjct: 81 cgccacgctcccgctccgcctcctcc 56
>ref|XM_848860.1| PREDICTED: Canis familiaris similar to Kinase suppressor of ras-1 (Kinase suppressor of ras), transcript variant 1 (LOC610451), mRNA Length = 2697 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 228 gtggaggaggtggtagaggatg 249 |||||||||||||||||||||| Sbjct: 1364 gtggaggaggtggtagaggatg 1343
>ref|XM_862957.1| PREDICTED: Canis familiaris similar to Kinase suppressor of ras-1 (Kinase suppressor of ras), transcript variant 2 (LOC610451), mRNA Length = 2589 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 228 gtggaggaggtggtagaggatg 249 |||||||||||||||||||||| Sbjct: 1364 gtggaggaggtggtagaggatg 1343
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cgccacgctccctctccgcctcctcc 93 |||||||||||| ||||||||||||| Sbjct: 22368402 cgccacgctcccgctccgcctcctcc 22368427 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 ctcctccacgccgccgccttcctcc 132 ||||||| ||||||||||||||||| Sbjct: 27471471 ctcctccccgccgccgccttcctcc 27471447 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 26031917 cccactcctccacgccgccgc 26031937 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 17608242 ccacgccgccgccttcctcc 17608261
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cgccacgctccctctccgcctcctcc 93 |||||||||||| ||||||||||||| Sbjct: 119306 cgccacgctcccgctccgcctcctcc 119331
>ref|NM_101952.1| Arabidopsis thaliana unknown protein AT1G20990 mRNA, complete cds Length = 960 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ccctctccgcctcctcccctc 97 ||||||||||||||||||||| Sbjct: 564 ccctctccgcctcctcccctc 584
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 68830 cccactcctccacgccgccgc 68850
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 tcgccgccgccgaggaggcgc 207 ||||||||||||||||||||| Sbjct: 1573629 tcgccgccgccgaggaggcgc 1573609
>ref|XM_592033.2| PREDICTED: Bos taurus similar to Putative MAP kinase-activating protein C22orf5 (Putative MAPK-activating protein FM08) (LOC514220), mRNA Length = 1541 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 tggctgctgctggcgcggggaagga 304 ||||||||||||||| ||||||||| Sbjct: 1388 tggctgctgctggcggggggaagga 1412
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 tcgccgccgccgaggaggcgc 207 ||||||||||||||||||||| Sbjct: 2810430 tcgccgccgccgaggaggcgc 2810410
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 20342619 cccactcctccacgccgccgc 20342599
>emb|CR937048.1|RN139I21 Rattus norvegicus chromosome 1 BAC CH230-139I21, complete sequence Length = 212885 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 gaggtggaggaggtggtagag 245 ||||||||||||||||||||| Sbjct: 92882 gaggtggaggaggtggtagag 92862
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 51099 cccactcctccacgccgccgc 51119
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 tcgccgccgccgaggaggcgc 207 ||||||||||||||||||||| Sbjct: 2550663 tcgccgccgccgaggaggcgc 2550643
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 ctcctccacgccgccgccttcctcc 132 ||||||| ||||||||||||||||| Sbjct: 124098 ctcctccccgccgccgccttcctcc 124074
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 tagtgtcaactagagacaaagctta 457 |||||||| |||||||||||||||| Sbjct: 20288 tagtgtcacctagagacaaagctta 20264
>dbj|AB226254.1| Aspergillus oryzae cDNA, contig sequence: AoEST3113 Length = 2058 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 agaaccccactcctccacgcc 119 ||||||||||||||||||||| Sbjct: 1158 agaaccccactcctccacgcc 1138
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 agaaccccactcctccacgcc 119 ||||||||||||||||||||| Sbjct: 1204958 agaaccccactcctccacgcc 1204938
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 137926 cccactcctccacgccgccgc 137906
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 772806 cccactcctccacgccgccgc 772826 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 15154930 ccacgccgccgccttcctcc 15154911
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 16296589 cccactcctccacgccgccgc 16296609
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ccactcctccacgccgccgcc 125 ||||||||||||||||||||| Sbjct: 24914638 ccactcctccacgccgccgcc 24914618
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 15676726 cccactcctccacgccgccgc 15676746 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 tccctctccgcctcctcccctcca 99 ||||||||| |||||||||||||| Sbjct: 27988286 tccctctcctcctcctcccctcca 27988263
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 20335648 cccactcctccacgccgccgc 20335628
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 10792813 cccactcctccacgccgccgc 10792833 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 16953643 ccacgccgccgccttcctcc 16953662 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccg 123 |||||||||||||||||||| Sbjct: 10782703 cccactcctccacgccgccg 10782722
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ccactcctccacgccgccgcc 125 ||||||||||||||||||||| Sbjct: 98270 ccactcctccacgccgccgcc 98250
>gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205220 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 215 ggtggaagccgaggtggaggaggtggtagagga 247 |||||||| ||||||||||||||||| ||||| Sbjct: 43891 ggtggaagaggaggtggaggaggtggtggagga 43859
>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702D12 Length = 137332 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 115627 cccactcctccacgccgccgc 115647 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccg 123 |||||||||||||||||||| Sbjct: 105517 cccactcctccacgccgccg 105536
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 tcgccgccgccgaggaggcgc 207 ||||||||||||||||||||| Sbjct: 4356716 tcgccgccgccgaggaggcgc 4356736
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ccactcctccacgccgccgcc 125 ||||||||||||||||||||| Sbjct: 149089 ccactcctccacgccgccgcc 149069
>gb|AC157093.4| Mus musculus 6 BAC RP24-338D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185068 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 215 ggtggaagccgaggtggaggaggtggtagagga 247 |||||||| ||||||||||||||||| ||||| Sbjct: 176071 ggtggaagaggaggtggaggaggtggtggagga 176039
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 2441 cccactcctccacgccgccgc 2461
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1104G07 Length = 119643 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 86767 cccactcctccacgccgccgc 86787
>dbj|AK111097.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-G09, full insert sequence Length = 539 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 ctcctccacgccgccgccttcctcc 132 ||||||| ||||||||||||||||| Sbjct: 86 ctcctccccgccgccgccttcctcc 62
>dbj|AK111068.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-E03, full insert sequence Length = 707 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ccactcctccacgccgccgcc 125 ||||||||||||||||||||| Sbjct: 85 ccactcctccacgccgccgcc 105
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 tcgccgccgccgaggaggcgc 207 ||||||||||||||||||||| Sbjct: 2335581 tcgccgccgccgaggaggcgc 2335601
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 cccgcgacccgcaactggcgc 182 ||||||||||||||||||||| Sbjct: 163490 cccgcgacccgcaactggcgc 163510
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 772808 cccactcctccacgccgccgc 772828 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 15236658 ccacgccgccgccttcctcc 15236639
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cccactcctccacgccgccgc 124 ||||||||||||||||||||| Sbjct: 66244 cccactcctccacgccgccgc 66264
>gb|AC007369.2| Arabidopsis thaliana chromosome I BAC F9H16 genomic sequence, complete sequence Length = 103192 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ccctctccgcctcctcccctc 97 ||||||||||||||||||||| Sbjct: 16952 ccctctccgcctcctcccctc 16972
>ref|NM_113112.2| Arabidopsis thaliana unknown protein AT3G22150 mRNA, complete cds Length = 2523 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ggtggaggaggtggtagagg 246 |||||||||||||||||||| Sbjct: 98 ggtggaggaggtggtagagg 79
>ref|XM_464282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 736 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 cgctccctctccgcctcctcccct 96 |||||||||||| ||||||||||| Sbjct: 147 cgctccctctcctcctcctcccct 124
>gb|AC131966.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0028C16, complete sequence Length = 151030 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 83237 ccacgccgccgccttcctcc 83218
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 tccctctccgcctcctcccctcca 99 ||||||||| |||||||||||||| Sbjct: 68451 tccctctcctcctcctcccctcca 68428
>gb|AY581319.1| Takifugu rubripes Ellis van Creveld protein 2-like mRNA, complete cds Length = 4047 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cctctccgcctcctcccctccaga 101 ||||||| |||||||||||||||| Sbjct: 3198 cctctcctcctcctcccctccaga 3175
>gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome 9, complete sequence Length = 183638 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 ctccctctccgcctcctcccctcc 98 |||||||||| ||||||||||||| Sbjct: 56211 ctccctctccccctcctcccctcc 56188
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 10792 ccacgccgccgccttcctcc 10773
>gb|AE012983.1| Thermoanaerobacter tengcongensis MB4, section 10 of 244 of the complete genome Length = 14517 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 gacaaagcttatattggcat 466 |||||||||||||||||||| Sbjct: 3972 gacaaagcttatattggcat 3991
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tggaagccgaggtggaggaggtgg 240 ||||||||||||||| |||||||| Sbjct: 389423 tggaagccgaggtggtggaggtgg 389446
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 147894 ccacgccgccgccttcctcc 147875
>ref|NM_020637.1| Homo sapiens fibroblast growth factor 22 (FGF22), mRNA Length = 513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 30 ctggctgctgctggcgcggg 49
>emb|AJ249580.1|SCO249580 Streptomyces coelicolor A3(2) sigJ gene, arsJ gene and prsJ gene Length = 3062 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 tcgccgccgccgaggaggcgcccg 210 |||||| ||||||||||||||||| Sbjct: 3033 tcgccgtcgccgaggaggcgcccg 3010
>ref|NM_001032706.1| Takifugu rubripes Ellis van Creveld protein 2-like (Evc2), mRNA Length = 4047 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cctctccgcctcctcccctccaga 101 ||||||| |||||||||||||||| Sbjct: 3198 cctctcctcctcctcccctccaga 3175
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ccgccgccgaggaggcgccc 209 |||||||||||||||||||| Sbjct: 2727006 ccgccgccgaggaggcgccc 2727025
>gb|AC123853.2| Mus musculus BAC clone RP23-326J1 from chromosome 19, complete sequence Length = 205768 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ttgaacaaggtactactagt 436 |||||||||||||||||||| Sbjct: 78877 ttgaacaaggtactactagt 78858
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gccgccgccgaggaggcgcc 208 |||||||||||||||||||| Sbjct: 35526 gccgccgccgaggaggcgcc 35545
>gb|AY426986.1| Homo sapiens fibroblast growth factor 22 (FGF22) gene, complete cds Length = 6160 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 1099 ctggctgctgctggcgcggg 1118
>gb|AY359084.1| Homo sapiens DNA108912 FGF22 (UNQ2500) mRNA, complete cds Length = 520 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 36 ctggctgctgctggcgcggg 55
>gb|BC041334.2| Homo sapiens cDNA clone IMAGE:5277044, with apparent retained intron Length = 1712 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 77 ctggctgctgctggcgcggg 96
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 tcgccgccgccgaggaggcgcccg 210 |||||| ||||||||||||||||| Sbjct: 51118 tcgccgtcgccgaggaggcgcccg 51095
>gb|AC111170.11| Homo sapiens chromosome 17, clone RP11-75C10, complete sequence Length = 158988 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gccgccgccttcctccctgc 136 |||||||||||||||||||| Sbjct: 21666 gccgccgccttcctccctgc 21647
>emb|AJ310700.1|TPU310700 Trametes pubescens mRNA for Phytase (phyA gene) Length = 1511 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ccctcgccatcgttccgcgc 52 |||||||||||||||||||| Sbjct: 1370 ccctcgccatcgttccgcgc 1351
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctcccctcc 98 |||||||||| ||||||||||||| Sbjct: 116856 ctccctctcctcctcctcccctcc 116879
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gccgaggtggaggaggtggt 241 |||||||||||||||||||| Sbjct: 2251511 gccgaggtggaggaggtggt 2251530
>gb|AC131405.5| Rattus norvegicus BAC CH230-179I7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 217197 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 204874 ctggctgctgctggcgcggg 204855
>gb|S46953.1| neurofilament H {promoter} [human, Genomic, 242 nt] Length = 242 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccctctccgcctcctcccct 96 |||||||||||||||||||| Sbjct: 122 ccctctccgcctcctcccct 103
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tccacgccgccgccttcctc 131 |||||||||||||||||||| Sbjct: 380673 tccacgccgccgccttcctc 380692
>gb|AC111182.20| Homo sapiens chromosome 17, clone RP11-936I5, complete sequence Length = 171898 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gccgccgccttcctccctgc 136 |||||||||||||||||||| Sbjct: 138181 gccgccgccttcctccctgc 138162
>gb|AC000035.2| Homo sapiens Chromosome 22q12 Cosmid Clone ll47g11, complete sequence Length = 38429 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccctctccgcctcctcccct 96 |||||||||||||||||||| Sbjct: 18855 ccctctccgcctcctcccct 18836
>gb|AC005529.7| Homo sapiens chromosome 22 clone bk256d12 map 22q12, complete sequence Length = 318488 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccctctccgcctcctcccct 96 |||||||||||||||||||| Sbjct: 8043 ccctctccgcctcctcccct 8024
>gb|AC000025.2| Homo sapiens Chromosome 22q12 BAC Clone 566c1, complete sequence Length = 135405 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccctctccgcctcctcccct 96 |||||||||||||||||||| Sbjct: 46276 ccctctccgcctcctcccct 46257
>gb|AC005527.3| Homo sapiens 22q11 BAC Clone 489d1 In MDR Region, complete sequence Length = 149308 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ccctctccgcctcctcccct 96 |||||||||||||||||||| Sbjct: 7819 ccctctccgcctcctcccct 7800
>gb|AF068267.1|AF068267 Streptomyces coelicolor A3(2) DpsA (dpsA), putative membrane protein (rsbB), putative anti-sigma factor kinase (rsbA), and SigB (sigB) genes, complete cds; and unknown genes Length = 4611 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 tcgccgccgccgaggaggcgcccg 210 |||||| ||||||||||||||||| Sbjct: 4041 tcgccgtcgccgaggaggcgcccg 4018
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cgccgccgaggaggcgcccg 210 |||||||||||||||||||| Sbjct: 58588 cgccgccgaggaggcgcccg 58569
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggggaaggatgccgacatc 314 |||||||||||||||||||| Sbjct: 21608492 cggggaaggatgccgacatc 21608473 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 15754431 ccacgccgccgccttcctcc 15754450 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 14418629 ccacgccgccgccttcctcc 14418648
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctcccctcc 98 |||||||||| ||||||||||||| Sbjct: 8912249 ctccctctcctcctcctcccctcc 8912272 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 3220362 ccacgccgccgccttcctcc 3220343
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggaagccgaggtggaggagg 237 |||||||||||||||||||| Sbjct: 20917516 ggaagccgaggtggaggagg 20917535
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctccc 94 |||||||||||||||||||| Sbjct: 3949964 ctccctctccgcctcctccc 3949983 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 90032 ccacgccgccgccttcctcc 90013
>ref|NM_130751.1| Rattus norvegicus fibroblast growth factor 22 (Fgf22), mRNA Length = 489 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 30 ctggctgctgctggcgcggg 49
>ref|XM_340889.2| PREDICTED: Rattus norvegicus aminopeptidase puromycin sensitive (Npepps), mRNA Length = 4014 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctctccgcctcctcccctcc 98 |||||||||||||||||||| Sbjct: 66 ctctccgcctcctcccctcc 85
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0027A14, from chromosome 10, complete sequence Length = 175667 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctcccctcc 98 |||||||||| ||||||||||||| Sbjct: 472 ctccctctcctcctcctcccctcc 495
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccactcctccacgccgccgc 124 |||||||||||||||||||| Sbjct: 42483 ccactcctccacgccgccgc 42464
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctccc 94 |||||||||||||||||||| Sbjct: 55840 ctccctctccgcctcctccc 55859
>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1460A05 Length = 143371 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 90032 ccacgccgccgccttcctcc 90013
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggaagccgaggtggaggagg 237 |||||||||||||||||||| Sbjct: 9605 ggaagccgaggtggaggagg 9624
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggaagccgaggtggaggagg 237 |||||||||||||||||||| Sbjct: 109742 ggaagccgaggtggaggagg 109761
>emb|BX649293.4| Mouse DNA sequence from clone RP23-360N18 on chromosome 2, complete sequence Length = 126043 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctcccctcc 98 |||||||||| ||||||||||||| Sbjct: 49246 ctccctctcctcctcctcccctcc 49269
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cgctccctctccgcctcctcccct 96 |||||||||||| ||||||||||| Sbjct: 88415 cgctccctctcctcctcctcccct 88438
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cgctccctctccgcctcctcccct 96 |||||||||||| ||||||||||| Sbjct: 30554 cgctccctctcctcctcctcccct 30577
>dbj|AB091693.1| Sphingomonas sp. P2 aromatic compounds-catabolic genes extending xylA to ahdA2e, partial and complete cds Length = 13985 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tccggtggaagccgaggtgg 231 |||||||||||||||||||| Sbjct: 10107 tccggtggaagccgaggtgg 10126
>dbj|AP001306.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MKA23 Length = 70100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ggtggaggaggtggtagagg 246 |||||||||||||||||||| Sbjct: 21622 ggtggaggaggtggtagagg 21603
>dbj|AK108630.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-F01, full insert sequence Length = 1915 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggggaaggatgccgacatc 314 |||||||||||||||||||| Sbjct: 549 cggggaaggatgccgacatc 530
>dbj|AK107753.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H11, full insert sequence Length = 736 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 cgctccctctccgcctcctcccct 96 |||||||||||| ||||||||||| Sbjct: 147 cgctccctctcctcctcctcccct 124
>dbj|AK065681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038J10, full insert sequence Length = 2145 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggaagccgaggtggaggagg 237 |||||||||||||||||||| Sbjct: 86 ggaagccgaggtggaggagg 67
>dbj|AK063124.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E11, full insert sequence Length = 633 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 cgccgccgccgaggaggcgcccgc 211 |||||||||||||||||| ||||| Sbjct: 357 cgccgccgccgaggaggctcccgc 380
>gb|AY105126.1| Zea mays PCO124988 mRNA sequence Length = 991 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 tggcgcggggaaggatgccg 309 |||||||||||||||||||| Sbjct: 89 tggcgcggggaaggatgccg 108
>gb|U23410.1|TAU23410 Triticum aestivum p34cdc2 (cdc2TaB) mRNA, partial cds Length = 915 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 accccactcctccacgccgccgcc 125 ||||||||||||| |||||||||| Sbjct: 4 accccactcctccccgccgccgcc 27
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctcccctcc 98 |||||||||| ||||||||||||| Sbjct: 148906 ctccctctccccctcctcccctcc 148929
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 130510 ccacgccgccgccttcctcc 130529
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctccc 94 |||||||||||||||||||| Sbjct: 1741426 ctccctctccgcctcctccc 1741445
>gb|U41300.1|BEU41300 Blastocladiella emersonii mitochondrial processing peptidase beta subunit 1 (BeMPP1) gene, complete cds Length = 2235 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cctccacgccgccgccttcc 129 |||||||||||||||||||| Sbjct: 1114 cctccacgccgccgccttcc 1133
>gb|DQ228487.1| Uncultured bacterium 2063G putative membrane protein, putative cardiolipin synthases/phospholipase D, conserved membrane protein, and putative polyketide synthase genes, complete cds; and putative xanthine/uracil permease gene, partial cds Length = 16557 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 cgccgccgccgaggaggcgc 207 |||||||||||||||||||| Sbjct: 16449 cgccgccgccgaggaggcgc 16468
>emb|AL845487.5| Mouse DNA sequence from clone RP23-288M4 on chromosome 2, complete sequence Length = 120057 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctcccctcc 98 |||||||||| ||||||||||||| Sbjct: 66280 ctccctctcctcctcctcccctcc 66303
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ctccctctccgcctcctcccctcc 98 |||||||||| ||||||||||||| Sbjct: 8917388 ctccctctcctcctcctcccctcc 8917411 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 3220283 ccacgccgccgccttcctcc 3220264
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggggaaggatgccgacatc 314 |||||||||||||||||||| Sbjct: 21536813 cggggaaggatgccgacatc 21536794 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 15707664 ccacgccgccgccttcctcc 15707683 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 14372913 ccacgccgccgccttcctcc 14372932
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05, complete sequence Length = 173950 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 88981 ccacgccgccgccttcctcc 89000
>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158019 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggggaaggatgccgacatc 314 |||||||||||||||||||| Sbjct: 37397 cggggaaggatgccgacatc 37416
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134370 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 125836 ccacgccgccgccttcctcc 125855
>emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159718 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 71224 ccacgccgccgccttcctcc 71205
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccacgccgccgccttcctcc 132 |||||||||||||||||||| Sbjct: 98663 ccacgccgccgccttcctcc 98644
>emb|X95710.1|MMULGENES Pseudorabies virus UL23, UL24, UL25, UL26, UL26.5, and UL44-gC genes Length = 4523 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cgccgccgaggaggcgcccg 210 |||||||||||||||||||| Sbjct: 3185 cgccgccgaggaggcgcccg 3166
>gb|AC004449.1|AC004449 Homo sapiens chromosome 19, cosmid R33683, complete sequence Length = 38186 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 29019 ctggctgctgctggcgcggg 29038
>gb|M55685.1|BLYLDHA13 Hordeum vulgare L-lactate dehydrogenase mRNA, complete cds Length = 1298 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cacgccgccgccttcctccc 133 |||||||||||||||||||| Sbjct: 321 cacgccgccgccttcctccc 340
>dbj|AB078902.1| Rattus norvegicus FGF22 mRNA for fibroblast growth factor 22, complete cds Length = 489 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 30 ctggctgctgctggcgcggg 49
>dbj|AB062669.1| Cucurbita maxima CmMP73 mRNA for preproMP73, complete cds Length = 2282 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgctccctctccgcctcctc 92 |||||||||||||||||||| Sbjct: 1841 cgctccctctccgcctcctc 1822
>dbj|AB021925.1| Homo sapiens FGF22 mRNA for FGF-22, complete cds Length = 513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctggctgctgctggcgcggg 298 |||||||||||||||||||| Sbjct: 30 ctggctgctgctggcgcggg 49
>dbj|D50058.1|GOTP450SCB Goat mRNA for cytochromes P450scc, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aggaggtggtagaggatgcc 251 |||||||||||||||||||| Sbjct: 914 aggaggtggtagaggatgcc 895
>dbj|D50057.1|SHPP450SCA Sheep mRNA for cytochromes P450scc, complete cds Length = 1826 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aggaggtggtagaggatgcc 251 |||||||||||||||||||| Sbjct: 914 aggaggtggtagaggatgcc 895 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,697,900 Number of Sequences: 3902068 Number of extensions: 4697900 Number of successful extensions: 120511 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116159 Number of HSP's gapped (non-prelim): 4352 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)