ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdf05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479828.1| Oryza sativa (japonica cultivar-group), mRNA 446 e-122
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 446 e-122
3dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic D... 446 e-122
4dbj|AK102447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
5dbj|AK067413.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
6gb|AY104255.1| Zea mays PCO124332 mRNA sequence 218 1e-53
7dbj|AK104476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 4e-47
8dbj|AK060858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 4e-47
9gb|BT018954.1| Zea mays clone Contig146.F mRNA sequence 172 6e-40
10ref|NM_114699.3| Arabidopsis thaliana unknown protein AT3G48390 ... 58 3e-05
11emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, B... 58 3e-05
12gb|AY074567.1| Arabidopsis thaliana AT3g48390/T29H11_90 mRNA, co... 58 3e-05
13gb|BT002208.1| Arabidopsis thaliana At3g48390/T29H11_90 mRNA, co... 58 3e-05
14gb|DQ428031.1| Sorghum propinquum locus pPAP04A10 genomic sequence 44 0.38
15gb|DQ428030.1| Sorghum bicolor voucher PI585454 locus pPAP04A10 ... 44 0.38
16gb|DQ428029.1| Sorghum bicolor voucher PI267539 locus pPAP04A10 ... 44 0.38
17gb|DQ428028.1| Sorghum bicolor voucher PI267408 locus pPAP04A10 ... 44 0.38
18gb|DQ428027.1| Sorghum bicolor voucher PI221607 locus pPAP04A10 ... 44 0.38
19gb|DQ428026.1| Sorghum bicolor voucher PI152702 locus pPAP04A10 ... 44 0.38
20gb|DQ428025.1| Sorghum bicolor voucher NSL92371 locus pPAP04A10 ... 44 0.38
21gb|DQ428024.1| Sorghum bicolor voucher NSL87902 locus pPAP04A10 ... 44 0.38
22gb|DQ428023.1| Sorghum bicolor voucher NSL87666 locus pPAP04A10 ... 44 0.38
23gb|DQ428022.1| Sorghum bicolor voucher NSL77217 locus pPAP04A10 ... 44 0.38
24gb|DQ428021.1| Sorghum bicolor voucher NSL77034 locus pPAP04A10 ... 44 0.38
25gb|DQ428020.1| Sorghum bicolor voucher NSL56174 locus pPAP04A10 ... 44 0.38
26gb|DQ428019.1| Sorghum bicolor voucher NSL56003 locus pPAP04A10 ... 44 0.38
27gb|DQ428018.1| Sorghum bicolor voucher NSL55243 locus pPAP04A10 ... 44 0.38
28gb|DQ428017.1| Sorghum bicolor voucher NSL51365 locus pPAP04A10 ... 44 0.38
29gb|DQ428016.1| Sorghum bicolor voucher NSL51030 locus pPAP04A10 ... 44 0.38
30gb|DQ428015.1| Sorghum bicolor voucher NSL50875 locus pPAP04A10 ... 44 0.38
31gb|DQ428014.1| Sorghum bicolor voucher BTx623 locus pPAP04A10 ge... 44 0.38
32gb|AC092710.6| Mus musculus chromosome 13, clone RP23-5A19, comp... 40 5.9
33gb|AC025219.6| Homo sapiens chromosome 15, clone RP11-276M12, co... 40 5.9
34emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in ... 40 5.9
35gb|AC132302.3| Mus musculus BAC clone RP24-279N5 from chromosome... 40 5.9
36gb|AY165512.1| Homo sapiens menage a trois 1 (CAK assembly facto... 40 5.9
37ref|XM_782933.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.9
38ref|XM_784898.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.9
39gb|AC156615.7| Mus musculus chromosome 3, clone RP23-1B20, compl... 40 5.9
40gb|AC103976.6| Homo sapiens chromosome 15, clone RP11-121E15, co... 40 5.9
41ref|XM_691549.1| PREDICTED: Danio rerio similar to chromodomain ... 40 5.9
42gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complet... 40 5.9
43gb|AC006582.13|AC006582 Pan troglodytes 12cp12 BAC RPCI43-77C18 ... 40 5.9
44emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-3... 40 5.9
45emb|CR855375.8| Zebrafish DNA sequence from clone CH211-159E12 i... 40 5.9
46emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, c... 40 5.9
47gb|AC011604.10| Homo sapiens 12p12-31.7-37.2 BAC RP11-80N2 (Rosw... 40 5.9 
>ref|XM_479828.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2362

 Score =  446 bits (225), Expect = e-122
 Identities = 360/405 (88%)
 Strand = Plus / Plus

                                                                        
Query: 36   aggtgccaatggcaatgtccaagatgatgaccatgagaagctgaggaagtacaagaggga 95
            ||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||  ||
Sbjct: 1434 aggtgccaatggggatgtccaagatgatgaacatgagaagctgaggaggtacaagaaaga 1493

                                                                        
Query: 96   ggctgtgtctatgatacatgagtacttcctttctgatgatatagcagagcttattcgcac 155
            |||||| |||||||| ||||||||||| || ||||||||| || | ||| ||||||||| 
Sbjct: 1494 ggctgtttctatgattcatgagtactttctctctgatgatgtacctgagattattcgcag 1553

                                                                        
Query: 156  acttgaagagcttggtttaccagagtacaacccggtctttatcaagaaattgataacaat 215
             ||  ||||||||||||  |||||||||||||| |||||||| |||||  | ||||||||
Sbjct: 1554 cctcaaagagcttggttctccagagtacaaccccgtctttattaagaagcttataacaat 1613

                                                                        
Query: 216  tgccatggaccgcaagaacagggagaaagagatggcatcagttctcctatcctcattaag 275
            ||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 1614 tgctatggaccgcaaaaacagggagaaagagatggcttcaattcttctatcctcattaag 1673

                                                                        
Query: 276  catggagctattctctagtgaagacattgtcaaggggttcataatgcttctcgaatctgc 335
            ||||||  | ||||| |  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1674 catggaattgttctcaacagaagacattgtcaagggtttcataatgcttcttgaatctgc 1733

                                                                        
Query: 336  agaagatactgcactggacatattggatgcctcagatgagcttggactgttcctagcgag 395
            ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1734 agaagataccgcacttgatatattggatgcctcagatgagctgggactgttcctagccag 1793

                                                         
Query: 396  ggcagtgatcgatgatgtgcttgcgcctctgaacttagatgagat 440
             |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1794 agcagtgattgatgatgtgcttgcgcctctgaacttagatgagat 1838
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  446 bits (225), Expect = e-122
 Identities = 360/405 (88%)
 Strand = Plus / Minus

                                                                           
Query: 36      aggtgccaatggcaatgtccaagatgatgaccatgagaagctgaggaagtacaagaggga 95
               ||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||  ||
Sbjct: 1116691 aggtgccaatggggatgtccaagatgatgaacatgagaagctgaggaggtacaagaaaga 1116632

                                                                           
Query: 96      ggctgtgtctatgatacatgagtacttcctttctgatgatatagcagagcttattcgcac 155
               |||||| |||||||| ||||||||||| || ||||||||| || | ||| ||||||||| 
Sbjct: 1116631 ggctgtttctatgattcatgagtactttctctctgatgatgtacctgagattattcgcag 1116572

                                                                           
Query: 156     acttgaagagcttggtttaccagagtacaacccggtctttatcaagaaattgataacaat 215
                ||  ||||||||||||  |||||||||||||| |||||||| |||||  | ||||||||
Sbjct: 1116571 cctcaaagagcttggttctccagagtacaaccccgtctttattaagaagcttataacaat 1116512

                                                                           
Query: 216     tgccatggaccgcaagaacagggagaaagagatggcatcagttctcctatcctcattaag 275
               ||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 1116511 tgctatggaccgcaaaaacagggagaaagagatggcttcaattcttctatcctcattaag 1116452

                                                                           
Query: 276     catggagctattctctagtgaagacattgtcaaggggttcataatgcttctcgaatctgc 335
               ||||||  | ||||| |  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1116451 catggaattgttctcaacagaagacattgtcaagggtttcataatgcttcttgaatctgc 1116392

                                                                           
Query: 336     agaagatactgcactggacatattggatgcctcagatgagcttggactgttcctagcgag 395
               ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1116391 agaagataccgcacttgatatattggatgcctcagatgagctgggactgttcctagccag 1116332

                                                            
Query: 396     ggcagtgatcgatgatgtgcttgcgcctctgaacttagatgagat 440
                |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1116331 agcagtgattgatgatgtgcttgcgcctctgaacttagatgagat 1116287
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>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1203H11
          Length = 156561

 Score =  446 bits (225), Expect = e-122
 Identities = 360/405 (88%)
 Strand = Plus / Minus

                                                                         
Query: 36    aggtgccaatggcaatgtccaagatgatgaccatgagaagctgaggaagtacaagaggga 95
             ||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||  ||
Sbjct: 29928 aggtgccaatggggatgtccaagatgatgaacatgagaagctgaggaggtacaagaaaga 29869

                                                                         
Query: 96    ggctgtgtctatgatacatgagtacttcctttctgatgatatagcagagcttattcgcac 155
             |||||| |||||||| ||||||||||| || ||||||||| || | ||| ||||||||| 
Sbjct: 29868 ggctgtttctatgattcatgagtactttctctctgatgatgtacctgagattattcgcag 29809

                                                                         
Query: 156   acttgaagagcttggtttaccagagtacaacccggtctttatcaagaaattgataacaat 215
              ||  ||||||||||||  |||||||||||||| |||||||| |||||  | ||||||||
Sbjct: 29808 cctcaaagagcttggttctccagagtacaaccccgtctttattaagaagcttataacaat 29749

                                                                         
Query: 216   tgccatggaccgcaagaacagggagaaagagatggcatcagttctcctatcctcattaag 275
             ||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 29748 tgctatggaccgcaaaaacagggagaaagagatggcttcaattcttctatcctcattaag 29689

                                                                         
Query: 276   catggagctattctctagtgaagacattgtcaaggggttcataatgcttctcgaatctgc 335
             ||||||  | ||||| |  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 29688 catggaattgttctcaacagaagacattgtcaagggtttcataatgcttcttgaatctgc 29629

                                                                         
Query: 336   agaagatactgcactggacatattggatgcctcagatgagcttggactgttcctagcgag 395
             ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 29628 agaagataccgcacttgatatattggatgcctcagatgagctgggactgttcctagccag 29569

                                                          
Query: 396   ggcagtgatcgatgatgtgcttgcgcctctgaacttagatgagat 440
              |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 29568 agcagtgattgatgatgtgcttgcgcctctgaacttagatgagat 29524
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>dbj|AK102447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093O03, full
            insert sequence
          Length = 2790

 Score =  446 bits (225), Expect = e-122
 Identities = 360/405 (88%)
 Strand = Plus / Plus

                                                                        
Query: 36   aggtgccaatggcaatgtccaagatgatgaccatgagaagctgaggaagtacaagaggga 95
            ||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||  ||
Sbjct: 1434 aggtgccaatggggatgtccaagatgatgaacatgagaagctgaggaggtacaagaaaga 1493

                                                                        
Query: 96   ggctgtgtctatgatacatgagtacttcctttctgatgatatagcagagcttattcgcac 155
            |||||| |||||||| ||||||||||| || ||||||||| || | ||| ||||||||| 
Sbjct: 1494 ggctgtttctatgattcatgagtactttctctctgatgatgtacctgagattattcgcag 1553

                                                                        
Query: 156  acttgaagagcttggtttaccagagtacaacccggtctttatcaagaaattgataacaat 215
             ||  ||||||||||||  |||||||||||||| |||||||| |||||  | ||||||||
Sbjct: 1554 cctcaaagagcttggttctccagagtacaaccccgtctttattaagaagcttataacaat 1613

                                                                        
Query: 216  tgccatggaccgcaagaacagggagaaagagatggcatcagttctcctatcctcattaag 275
            ||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 1614 tgctatggaccgcaaaaacagggagaaagagatggcttcaattcttctatcctcattaag 1673

                                                                        
Query: 276  catggagctattctctagtgaagacattgtcaaggggttcataatgcttctcgaatctgc 335
            ||||||  | ||||| |  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1674 catggaattgttctcaacagaagacattgtcaagggtttcataatgcttcttgaatctgc 1733

                                                                        
Query: 336  agaagatactgcactggacatattggatgcctcagatgagcttggactgttcctagcgag 395
            ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1734 agaagataccgcacttgatatattggatgcctcagatgagctgggactgttcctagccag 1793

                                                         
Query: 396  ggcagtgatcgatgatgtgcttgcgcctctgaacttagatgagat 440
             |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1794 agcagtgattgatgatgtgcttgcgcctctgaacttagatgagat 1838
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>dbj|AK067413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100H24, full
            insert sequence
          Length = 2320

 Score =  446 bits (225), Expect = e-122
 Identities = 360/405 (88%)
 Strand = Plus / Plus

                                                                        
Query: 36   aggtgccaatggcaatgtccaagatgatgaccatgagaagctgaggaagtacaagaggga 95
            ||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||  ||
Sbjct: 1052 aggtgccaatggggatgtccaagatgatgaacatgagaagctgaggaggtacaagaaaga 1111

                                                                        
Query: 96   ggctgtgtctatgatacatgagtacttcctttctgatgatatagcagagcttattcgcac 155
            |||||| |||||||| ||||||||||| || ||||||||| || | ||| ||||||||| 
Sbjct: 1112 ggctgtttctatgattcatgagtactttctctctgatgatgtacctgagattattcgcag 1171

                                                                        
Query: 156  acttgaagagcttggtttaccagagtacaacccggtctttatcaagaaattgataacaat 215
             ||  ||||||||||||  |||||||||||||| |||||||| |||||  | ||||||||
Sbjct: 1172 cctcaaagagcttggttctccagagtacaaccccgtctttattaagaagcttataacaat 1231

                                                                        
Query: 216  tgccatggaccgcaagaacagggagaaagagatggcatcagttctcctatcctcattaag 275
            ||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 1232 tgctatggaccgcaaaaacagggagaaagagatggcttcaattcttctatcctcattaag 1291

                                                                        
Query: 276  catggagctattctctagtgaagacattgtcaaggggttcataatgcttctcgaatctgc 335
            ||||||  | ||||| |  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1292 catggaattgttctcaacagaagacattgtcaagggtttcataatgcttcttgaatctgc 1351

                                                                        
Query: 336  agaagatactgcactggacatattggatgcctcagatgagcttggactgttcctagcgag 395
            ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1352 agaagataccgcacttgatatattggatgcctcagatgagctgggactgttcctagccag 1411

                                                         
Query: 396  ggcagtgatcgatgatgtgcttgcgcctctgaacttagatgagat 440
             |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1412 agcagtgattgatgatgtgcttgcgcctctgaacttagatgagat 1456
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>gb|AY104255.1| Zea mays PCO124332 mRNA sequence
          Length = 1019

 Score =  218 bits (110), Expect = 1e-53
 Identities = 203/234 (86%)
 Strand = Plus / Plus

                                                                       
Query: 208 ataacaattgccatggaccgcaagaacagggagaaagagatggcatcagttctcctatcc 267
           ||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||  | 
Sbjct: 14  ataacaattgctatggaccgcaagaacagggagaaagaaatggcatcggttcttctccct 73

                                                                       
Query: 268 tcattaagcatggagctattctctagtgaagacattgtcaaggggttcataatgcttctc 327
           ||||||||||||||||| |||||   ||||||||| | |||||| ||  ||||||| || 
Sbjct: 74  tcattaagcatggagctgttctcgtctgaagacatcgccaagggatttgtaatgctcctt 133

                                                                       
Query: 328 gaatctgcagaagatactgcactggacatattggatgcctcagatgagcttggactgttc 387
           |||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 134 gaatctgcagaagacaccgcgctggacatattggatgcctcagatgagctgggactgttc 193

                                                                 
Query: 388 ctagcgagggcagtgatcgatgatgtgcttgcgcctctgaacttagatgagatt 441
           ||||| ||||| ||||| ||||| || || || ||||| ||||| |||||||||
Sbjct: 194 ctagccagggctgtgattgatgacgttctcgcacctctaaacttggatgagatt 247
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>dbj|AK104476.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F02, full
           insert sequence
          Length = 995

 Score =  196 bits (99), Expect = 4e-47
 Identities = 126/135 (93%)
 Strand = Plus / Plus

                                                                       
Query: 306 caaggggttcataatgcttctcgaatctgcagaagatactgcactggacatattggatgc 365
           |||||| |||||||||||||| ||||||||||||||||| ||||| || |||||||||||
Sbjct: 1   caagggtttcataatgcttcttgaatctgcagaagataccgcacttgatatattggatgc 60

                                                                       
Query: 366 ctcagatgagcttggactgttcctagcgagggcagtgatcgatgatgtgcttgcgcctct 425
           |||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 61  ctcagatgagctgggactgttcctagccagagcagtgattgatgatgtgcttgcgcctct 120

                          
Query: 426 gaacttagatgagat 440
           |||||||||||||||
Sbjct: 121 gaacttagatgagat 135
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>dbj|AK060858.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F06, full
           insert sequence
          Length = 995

 Score =  196 bits (99), Expect = 4e-47
 Identities = 126/135 (93%)
 Strand = Plus / Plus

                                                                       
Query: 306 caaggggttcataatgcttctcgaatctgcagaagatactgcactggacatattggatgc 365
           |||||| |||||||||||||| ||||||||||||||||| ||||| || |||||||||||
Sbjct: 1   caagggtttcataatgcttcttgaatctgcagaagataccgcacttgatatattggatgc 60

                                                                       
Query: 366 ctcagatgagcttggactgttcctagcgagggcagtgatcgatgatgtgcttgcgcctct 425
           |||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 61  ctcagatgagctgggactgttcctagccagagcagtgattgatgatgtgcttgcgcctct 120

                          
Query: 426 gaacttagatgagat 440
           |||||||||||||||
Sbjct: 121 gaacttagatgagat 135
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>gb|BT018954.1| Zea mays clone Contig146.F mRNA sequence
          Length = 1057

 Score =  172 bits (87), Expect = 6e-40
 Identities = 174/203 (85%)
 Strand = Plus / Plus

                                                                       
Query: 208 ataacaattgccatggaccgcaagaacagggagaaagagatggcatcagttctcctatcc 267
           |||||||| || |||||||||||||||||||||||||| |||| ||| | ||| ||  | 
Sbjct: 48  ataacaatcgctatggaccgcaagaacagggagaaagaaatggaatcggatcttctccct 107

                                                                       
Query: 268 tcattaagcatggagctattctctagtgaagacattgtcaaggggttcataatgcttctc 327
           ||||||||||||||||| |||||  | |||||||| | |||||| ||||||||||| || 
Sbjct: 108 tcattaagcatggagctgttctcgggggaagacatcgccaagggattcataatgctcctt 167

                                                                       
Query: 328 gaatctgcagaagatactgcactggacatattggatgcctcagatgagcttggactgttc 387
           |||||||||||||| || || |||||||||| |||||||||||| || || |||||||||
Sbjct: 168 gaatctgcagaagacaccgcgctggacatatcggatgcctcagaagaactgggactgttc 227

                                  
Query: 388 ctagcgagggcagtgatcgatga 410
           ||||| ||||| ||||| |||||
Sbjct: 228 ctagccagggctgtgattgatga 250
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>ref|NM_114699.3| Arabidopsis thaliana unknown protein AT3G48390 mRNA, complete cds
          Length = 2304

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                        
Query: 313  ttcataatgcttctcgaatctgcagaagatactgcactggacatattggatgcctcagat 372
            ||||| ||||| |||||||| ||||||||||| ||| | ||||| || |  || ||||| 
Sbjct: 1458 ttcatcatgctcctcgaatccgcagaagatacagcattagacatcttagcagcatcagac 1517

                                                     
Query: 373  gagcttggactgttcctagcgagggcagtgatcgatgatgt 413
            |||||||  ||||| ||||| || || ||||||||||||||
Sbjct: 1518 gagcttgctctgtttctagctagagctgtgatcgatgatgt 1558
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>emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, BAC clone T29H11
          Length = 97488

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                         
Query: 313   ttcataatgcttctcgaatctgcagaagatactgcactggacatattggatgcctcagat 372
             ||||| ||||| |||||||| ||||||||||| ||| | ||||| || |  || ||||| 
Sbjct: 55282 ttcatcatgctcctcgaatccgcagaagatacagcattagacatcttagcagcatcagac 55341

                                                      
Query: 373   gagcttggactgttcctagcgagggcagtgatcgatgatgt 413
             |||||||  ||||| ||||| || || ||||||||||||||
Sbjct: 55342 gagcttgctctgtttctagctagagctgtgatcgatgatgt 55382
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>gb|AY074567.1| Arabidopsis thaliana AT3g48390/T29H11_90 mRNA, complete cds
          Length = 2183

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                        
Query: 313  ttcataatgcttctcgaatctgcagaagatactgcactggacatattggatgcctcagat 372
            ||||| ||||| |||||||| ||||||||||| ||| | ||||| || |  || ||||| 
Sbjct: 1439 ttcatcatgctcctcgaatccgcagaagatacagcattagacatcttagcagcatcagac 1498

                                                     
Query: 373  gagcttggactgttcctagcgagggcagtgatcgatgatgt 413
            |||||||  ||||| ||||| || || ||||||||||||||
Sbjct: 1499 gagcttgctctgtttctagctagagctgtgatcgatgatgt 1539
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>gb|BT002208.1| Arabidopsis thaliana At3g48390/T29H11_90 mRNA, complete cds
          Length = 1902

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                        
Query: 313  ttcataatgcttctcgaatctgcagaagatactgcactggacatattggatgcctcagat 372
            ||||| ||||| |||||||| ||||||||||| ||| | ||||| || |  || ||||| 
Sbjct: 1282 ttcatcatgctcctcgaatccgcagaagatacagcattagacatcttagcagcatcagac 1341

                                                     
Query: 373  gagcttggactgttcctagcgagggcagtgatcgatgatgt 413
            |||||||  ||||| ||||| || || ||||||||||||||
Sbjct: 1342 gagcttgctctgtttctagctagagctgtgatcgatgatgt 1382
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>gb|DQ428031.1| Sorghum propinquum locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428030.1| Sorghum bicolor voucher PI585454 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428029.1| Sorghum bicolor voucher PI267539 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428028.1| Sorghum bicolor voucher PI267408 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428027.1| Sorghum bicolor voucher PI221607 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428026.1| Sorghum bicolor voucher PI152702 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428025.1| Sorghum bicolor voucher NSL92371 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428024.1| Sorghum bicolor voucher NSL87902 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428023.1| Sorghum bicolor voucher NSL87666 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428022.1| Sorghum bicolor voucher NSL77217 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428021.1| Sorghum bicolor voucher NSL77034 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428020.1| Sorghum bicolor voucher NSL56174 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428019.1| Sorghum bicolor voucher NSL56003 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428018.1| Sorghum bicolor voucher NSL55243 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428017.1| Sorghum bicolor voucher NSL51365 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428016.1| Sorghum bicolor voucher NSL51030 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428015.1| Sorghum bicolor voucher NSL50875 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|DQ428014.1| Sorghum bicolor voucher BTx623 locus pPAP04A10 genomic sequence
          Length = 806

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 237 ggagaaagagatggcatcagttctcctatc 266
           ||||||||||||||||||||| || |||||
Sbjct: 335 ggagaaagagatggcatcagtgcttctatc 364
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>gb|AC092710.6| Mus musculus chromosome 13, clone RP23-5A19, complete sequence
          Length = 268129

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    gcacacttgaagagcttggt 171
              ||||||||||||||||||||
Sbjct: 158988 gcacacttgaagagcttggt 158969
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>gb|AC025219.6| Homo sapiens chromosome 15, clone RP11-276M12, complete sequence
          Length = 144244

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    ggagaaagagatggcatcag 256
              ||||||||||||||||||||
Sbjct: 108268 ggagaaagagatggcatcag 108287
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>emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in linkage group 7,
             complete sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    atgtccaagatgatgaccat 69
             ||||||||||||||||||||
Sbjct: 24271 atgtccaagatgatgaccat 24252
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>gb|AC132302.3| Mus musculus BAC clone RP24-279N5 from chromosome 3, complete sequence
          Length = 157307

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   gggagaaagagatggcatca 255
             ||||||||||||||||||||
Sbjct: 33150 gggagaaagagatggcatca 33131
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>gb|AY165512.1| Homo sapiens menage a trois 1 (CAK assembly factor) (MNAT1) gene,
             complete cds
          Length = 237446

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   aagaacagggagaaagagat 248
             ||||||||||||||||||||
Sbjct: 10858 aagaacagggagaaagagat 10839
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>ref|XM_782933.1| PREDICTED: Strongylocentrotus purpuratus similar to Golgi apparatus
           protein 1 precursor (Golgi sialoglycoprotein MG-160)
           (E-selectin ligand 1) (ESL-1) (Selel) (LOC583005), mRNA
          Length = 1218

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 aacagggagaaagagatggc 251
           ||||||||||||||||||||
Sbjct: 679 aacagggagaaagagatggc 698
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>ref|XM_784898.1| PREDICTED: Strongylocentrotus purpuratus similar to Golgi apparatus
            protein 1 precursor (Golgi sialoglycoprotein MG-160)
            (E-selectin ligand 1) (ESL-1) (Selel) (LOC585057),
            partial mRNA
          Length = 2466

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  aacagggagaaagagatggc 251
            ||||||||||||||||||||
Sbjct: 2080 aacagggagaaagagatggc 2099



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  aacagggagaaagagatggc 251
            ||||||||||||||||||||
Sbjct: 1849 aacagggagaaagagatggc 1868
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>gb|AC156615.7| Mus musculus chromosome 3, clone RP23-1B20, complete sequence
          Length = 210003

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    gggagaaagagatggcatca 255
              ||||||||||||||||||||
Sbjct: 114372 gggagaaagagatggcatca 114353
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>gb|AC103976.6| Homo sapiens chromosome 15, clone RP11-121E15, complete sequence
          Length = 182826

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    ggagaaagagatggcatcag 256
              ||||||||||||||||||||
Sbjct: 119244 ggagaaagagatggcatcag 119225
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>ref|XM_691549.1| PREDICTED: Danio rerio similar to chromodomain helicase DNA binding
           protein 3 isoform 2 (LOC568230), mRNA
          Length = 5648

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  atgtccaagatgatgaccat 69
           ||||||||||||||||||||
Sbjct: 762 atgtccaagatgatgaccat 781
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>gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complete sequence
          Length = 171653

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    agaagctgaggaagtacaagaggg 94
             ||||| ||||||||||||||||||
Sbjct: 74034 agaaggtgaggaagtacaagaggg 74057
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>gb|AC006582.13|AC006582 Pan troglodytes 12cp12 BAC RPCI43-77C18 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 186092

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    attctctagtgaagacattg 304
              ||||||||||||||||||||
Sbjct: 125503 attctctagtgaagacattg 125484
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>emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-307P22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 191464

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    aagaacagggagaaagagat 248
              ||||||||||||||||||||
Sbjct: 117499 aagaacagggagaaagagat 117518
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>emb|CR855375.8| Zebrafish DNA sequence from clone CH211-159E12 in linkage group 11,
             complete sequence
          Length = 178231

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   caagaaattgataacaattg 217
             ||||||||||||||||||||
Sbjct: 59738 caagaaattgataacaattg 59719
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>emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, complete sequence
          Length = 163121

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    atgtccaagatgatgaccat 69
             ||||||||||||||||||||
Sbjct: 17435 atgtccaagatgatgaccat 17416
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>gb|AC011604.10| Homo sapiens 12p12-31.7-37.2 BAC RP11-80N2 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 175606

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   attctctagtgaagacattg 304
             ||||||||||||||||||||
Sbjct: 64058 attctctagtgaagacattg 64077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,495,372
Number of Sequences: 3902068
Number of extensions: 3495372
Number of successful extensions: 67682
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67587
Number of HSP's gapped (non-prelim): 95
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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