Clone Name | basdf02 |
---|---|
Clone Library Name | barley_pub |
>CANA_DROME (Q11002) Calpain A (EC 3.4.22.-) (Calcium-activated neutral| proteinase A) (CANP A) [Contains: Calpain A catalytic subunit] Length = 828 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -2 Query: 314 PNHIISNPQFFTTELHEGFRLQQKHLQ--YILATLLRINVLTTNKFRTTTCTQSYQLNY 144 P+ I NPQFF E + F +QQ L ++LA + + FR QS++ NY Sbjct: 116 PHEIAENPQFF-VEGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENY 173
>MT2_CAEEL (P17512) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| (Metallothionein-like protein) (MT-Ce) Length = 62 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 Query: 235 CKCFCCNLNPSCSSVVKNC 291 CKC C N N SC++ K+C Sbjct: 2 CKCDCKNQNCSCNTGTKDC 20
>ARSB_HUMAN (P15848) Arylsulfatase B precursor (EC 3.1.6.12) (ASB)| (N-acetylgalactosamine-4-sulfatase) (G4S) Length = 533 Score = 27.7 bits (60), Expect = 7.4 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 8/68 (11%) Frame = -2 Query: 263 GFRLQQKHLQYILATLLRINVLTTNKFRTTTCTQS--------YQLNYIKLKVQHQTSAP 108 G R++ HL + A VL N + CT S YQ I+ +QHQ P Sbjct: 64 GSRIRTPHLDALAAG----GVLLDNYYTQPLCTPSRSQLLTGRYQ---IRTGLQHQIIWP 116 Query: 107 LSPTCRPL 84 P+C PL Sbjct: 117 CQPSCVPL 124
>NU2M_DROYA (P03895) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 341 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 Query: 236 QYILATLLRINVLTTNKFRTTTCTQSYQLNYIK 138 QY L TL+ ++ L T F C ++ LNY + Sbjct: 271 QYFLLTLMMMSTLITLFFYLRICYSAFMLNYFE 303
>CSR2_YEAST (Q12734) Transcription factor CSR2 (CHS5 SPA2 rescue protein 2)| Length = 1121 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/69 (18%), Positives = 33/69 (47%) Frame = -2 Query: 323 ARVPNHIISNPQFFTTELHEGFRLQQKHLQYILATLLRINVLTTNKFRTTTCTQSYQLNY 144 +R+P + + L +L+ +H Q + + ++ + K R+ +C+ SY+ + Sbjct: 486 SRIPESLYYPSARVSYSLRLATKLKDEHTQLVASRPRSSSISSPQKLRSYSCSDSYEYSQ 545 Query: 143 IKLKVQHQT 117 I ++ +T Sbjct: 546 IDDTIEGET 554 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,927,348 Number of Sequences: 219361 Number of extensions: 703381 Number of successful extensions: 1927 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1871 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1927 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)