ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdf02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY220736.1| Hordeum vulgare pathogen induced protein 2-4 (PI2-4) mRNA, complete cds Length = 842 Score = 478 bits (241), Expect = e-132 Identities = 244/245 (99%) Strand = Plus / Plus Query: 1 tgagtattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaagaagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 tgagtattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaagaagc 648 Query: 61 tggtgaacagtctgtgctttaaagaggggacgacaagtaggagacagcggtgcactggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 tggtgaacagtctgtgctttaaagaggggacgacaagtaggagacagcggtgcactggtt 708 Query: 121 tggtgttgcactttcagtttaatgtaatttagctgataagattgtgtgcatgttgttgtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 tggtgttgcactttcagtttaatgtaatttagctgataagattgtgtgcatgttgttgtt 768 Query: 181 ctgaatttgtttgtagtgagaacatttattctgagcaaggtagcgagaatatattgtaaa 240 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 769 ctgaatttgtttgtagtgagaacatttattctgagaaaggtagcgagaatatattgtaaa 828 Query: 241 tgctt 245 ||||| Sbjct: 829 tgctt 833
>ref|XM_467372.1| Oryza sativa (japonica cultivar-group), mRNA Length = 933 Score = 127 bits (64), Expect = 2e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 5 tattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaagaagctggt 64 |||||||||||||||||||||||||| || ||||||||||| |||| ||||||||||||| Sbjct: 582 tattgcttccacaactgtaaagcagccccagttatcattgttccaggcaaagaagctggt 641 Query: 65 gaacagtctgtgctttaaag 84 |||||||||||||||||||| Sbjct: 642 gaacagtctgtgctttaaag 661
>dbj|AK070986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078F08, full insert sequence Length = 933 Score = 127 bits (64), Expect = 2e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 5 tattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaagaagctggt 64 |||||||||||||||||||||||||| || ||||||||||| |||| ||||||||||||| Sbjct: 582 tattgcttccacaactgtaaagcagccccagttatcattgttccaggcaaagaagctggt 641 Query: 65 gaacagtctgtgctttaaag 84 |||||||||||||||||||| Sbjct: 642 gaacagtctgtgctttaaag 661
>gb|AY106903.1| Zea mays PCO102102 mRNA sequence Length = 677 Score = 103 bits (52), Expect = 4e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 1 tgagtattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaagaagc 60 |||||||||||||||||||||||||||||| || |||||||||| || | |||||||| Sbjct: 584 tgagtattgcttccacaactgtaaagcagccccaattatcattgtgcctgggaaagaagc 643 Query: 61 tggtgaacagtctgtgcttt 80 |||||||||||||||||||| Sbjct: 644 tggtgaacagtctgtgcttt 663
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 5 tattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaag 56 |||||||||||||||||||||||||| || ||||||||||| |||| ||||| Sbjct: 29134814 tattgcttccacaactgtaaagcagccccagttatcattgttccaggcaaag 29134865 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 55 agaagctggtgaacagtctgtgctttaaag 84 |||||||||||||||||||||||||||||| Sbjct: 29135362 agaagctggtgaacagtctgtgctttaaag 29135391
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 5 tattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaag 56 |||||||||||||||||||||||||| || ||||||||||| |||| ||||| Sbjct: 24782 tattgcttccacaactgtaaagcagccccagttatcattgttccaggcaaag 24833 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 55 agaagctggtgaacagtctgtgctttaaag 84 |||||||||||||||||||||||||||||| Sbjct: 25330 agaagctggtgaacagtctgtgctttaaag 25359
>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence Length = 149462 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 186 tttgtttgtagtgagaacattta 208 ||||||||||||||||||||||| Sbjct: 131232 tttgtttgtagtgagaacattta 131210
>gb|AC022884.12| Homo sapiens chromosome 18, clone RP11-449D8, complete sequence Length = 195139 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 186 tttgtttgtagtgagaacattt 207 |||||||||||||||||||||| Sbjct: 156311 tttgtttgtagtgagaacattt 156290
>emb|AJ630657.1| Cicer arietinum mRNA for putative universal stress protein (Usp gene) Length = 816 Score = 44.1 bits (22), Expect = 0.28 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1 tgagtattgcttccacaactgtaaagcagcaccggttatcattgtcccagccaaagaagc 60 |||||| ||||| ||| |||||||||||||||| || ||||||| || | ||||| || Sbjct: 615 tgagtactgctttcaccactgtaaagcagcacctcttgtcattgttcctggaaaagatgc 674 Query: 61 tggtga 66 |||||| Sbjct: 675 tggtga 680
>ref|XM_651173.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (15.t00065) partial mRNA Length = 201 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ttctgaatttgtttgtagtga 199 ||||||||||||||||||||| Sbjct: 126 ttctgaatttgtttgtagtga 146
>emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in linkage group 8, complete sequence Length = 249728 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ctttcagtttaatgtaattta 151 ||||||||||||||||||||| Sbjct: 49411 ctttcagtttaatgtaattta 49431
>gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, complete sequence Length = 163962 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 tgttgttgttctgaatttgtt 191 ||||||||||||||||||||| Sbjct: 69043 tgttgttgttctgaatttgtt 69023
>gb|AC092641.2| Homo sapiens BAC clone RP11-389F18 from 2, complete sequence Length = 219175 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tgtagtgagaacatttattct 212 ||||||||||||||||||||| Sbjct: 200396 tgtagtgagaacatttattct 200376
>emb|BX510992.5| Zebrafish DNA sequence from clone DKEYP-93H6 in linkage group 20, complete sequence Length = 211650 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 tttgtttgtagtgagaacatt 206 ||||||||||||||||||||| Sbjct: 193462 tttgtttgtagtgagaacatt 193482
>dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-715F3, complete sequence Length = 174547 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 aatttgtttgtagtgagaaca 204 ||||||||||||||||||||| Sbjct: 48671 aatttgtttgtagtgagaaca 48691
>gb|L16869.1|HUM2C18X01 Homo sapiens cytochrome P-4502C18 (CYP2C18) gene, exon 1 Length = 1668 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 1635 atttctttgtagtgagaacattta 1658
>gb|AF181895.6| Homo sapiens chromosome 8 clone CTD-2329M5 map p12, complete sequence Length = 109545 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aatttgtttgtagtgagaac 203 |||||||||||||||||||| Sbjct: 46511 aatttgtttgtagtgagaac 46492
>gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete sequence Length = 97390 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tagctcagtagtgaagaact 289 |||||||||||||||||||| Sbjct: 18730 tagctcagtagtgaagaact 18711
>emb|BX000992.5| Human DNA sequence from clone RP11-431P13 on chromosome X, complete sequence Length = 46289 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 aatttgtttgtagtgagaacattt 207 ||||| |||||||||||||||||| Sbjct: 34605 aatttttttgtagtgagaacattt 34582
>emb|AL590624.8| Human DNA sequence from clone RP11-380B22 on chromosome 1 Contains a novel gene, complete sequence Length = 157779 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 60169 atttttttgtagtgagaacattta 60146
>emb|AL583836.18| Human DNA sequence from clone RP11-466J14 on chromosome 10 Contains the CYP2C18 gene for cytochrome P450 family 2 subfamily C polypeptide 18, a pseudogene similar to part of NADH dehydrogenase 4 (MTND4) and the 5' end of the CYP2C19 gene for cytochrome P450 family 2 subfamily C polypeptide 19, complete sequence Length = 115177 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 6393 atttctttgtagtgagaacattta 6416
>emb|AL359094.14| Human DNA sequence from clone RP11-223P11 on chromosome 10, complete sequence Length = 133029 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaaca 204 |||||||||||||||||||| Sbjct: 5568 atttgtttgtagtgagaaca 5587
>emb|AL161798.23| Human DNA sequence from clone RP11-108M11 on chromosome 10 Contains the 3' end of a novel gene (FLJ37306), a novel gene and a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene, complete sequence Length = 134438 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 105227 atttctttgtagtgagaacattta 105250
>emb|AL158043.14| Human DNA sequence from clone RP11-5N23 on chromosome 10p14-15.3 Contains the 5' end of the PRKCQ gene for protein kinase C, theta, a novel gene and a CpG island, complete sequence Length = 132741 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||||||||||||||||| ||||| Sbjct: 111958 atttgtttgtagtgagaatattta 111981
>emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on chromosome 13q22.1-22.3 Contains a novel gene, complete sequence Length = 111350 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 82353 atttttttgtagtgagaacattta 82376
>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3 Contains the 3' end of a novel gene, a protein associated with PRK1 (AWP1) pseudogene, a novel gene (KIAA0375), a ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene, a novel gene, a ribosomal protein S29 (RPS29) pseudogene and a CpG island, complete sequence Length = 153826 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 31627 atttttttgtagtgagaacattta 31604
>emb|AL121977.11|HSJ492P14 Human DNA sequence from clone RP3-492P14 on chromosome 6q13-15 Contains a single stranded DNA binding protein pseudogene, the TPBG gene for trophoblast glycoprotein (5T4-AG) and a CpG island, complete sequence Length = 121909 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 50481 atttatttgtagtgagaacattta 50504
>emb|AL023578.1|HS248E1 Human DNA sequence from clone RP1-248E1 on chromosome 6q23.1-23.3 Contains the 3' end of the MOXD1 gene for monooxygenase DBH-like 1 and a eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene, complete sequence Length = 84107 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 76047 atttctttgtagtgagaacattta 76024
>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166471 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 36125 atttatttgtagtgagaacattta 36148
>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence Length = 217337 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 160200 atttctttgtagtgagaacattta 160177
>gb|AC120440.5| Homo sapiens chromosome 11, clone CTD-2013B7, complete sequence Length = 45460 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggtgcactggtttggtgttg 128 |||||||||||||||||||| Sbjct: 21026 ggtgcactggtttggtgttg 21007
>gb|AC094085.3| Homo sapiens chromosome 5 clone CTD-2110K23, complete sequence Length = 85977 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||||| ||||||||||||||||| Sbjct: 43171 atttgtgtgtagtgagaacattta 43148
>gb|AC023080.6| Homo sapiens chromosome 11, clone RP11-397M16, complete sequence Length = 175832 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggtgcactggtttggtgttg 128 |||||||||||||||||||| Sbjct: 79753 ggtgcactggtttggtgttg 79734
>gb|AC110057.3| Homo sapiens chromosome 11, clone CTD1-2361F20, complete sequence Length = 168473 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggtgcactggtttggtgttg 128 |||||||||||||||||||| Sbjct: 66541 ggtgcactggtttggtgttg 66560
>gb|AC103675.2| Homo sapiens chromosome 8, clone CTD-2329M5, complete sequence Length = 109550 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aatttgtttgtagtgagaac 203 |||||||||||||||||||| Sbjct: 46514 aatttgtttgtagtgagaac 46495
>gb|AC032002.7| Homo sapiens chromosome 8, clone RP11-379N22, complete sequence Length = 74425 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 32478 atttctttgtagtgagaacattta 32455
>gb|AC013561.9| Homo sapiens chromosome 8, clone RP11-301H15, complete sequence Length = 185249 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aatttgtttgtagtgagaac 203 |||||||||||||||||||| Sbjct: 45230 aatttgtttgtagtgagaac 45249
>gb|AC022416.5|AC022416 Homo sapiens chromosome 5 clone CTC-489P21, complete sequence Length = 139980 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||||| ||||||||||||||||| Sbjct: 6323 atttgtgtgtagtgagaacattta 6346
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aatttgtttgtagtgagaac 203 |||||||||||||||||||| Sbjct: 1297948 aatttgtttgtagtgagaac 1297929
>gb|AC048330.20| Homo sapiens 12 BAC RP11-334L2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188719 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 71704 atttatttgtagtgagaacattta 71681
>gb|AC106860.6| Homo sapiens BAC clone RP13-488D7 from 4, complete sequence Length = 180424 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 50031 atttctttgtagtgagaacattta 50008
>gb|AC158540.2| Pan troglodytes BAC clone CH251-315F23 from chromosome unknown, complete sequence Length = 200678 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 77954 atttctttgtagtgagaacattta 77931
>gb|AC158117.2| Pan troglodytes BAC clone CH251-437A17 from chromosome unknown, complete sequence Length = 154069 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 81017 atttctttgtagtgagaacattta 81040
>gb|AC154474.2| Mus musculus BAC clone RP24-122P10 from chromosome 16, complete sequence Length = 223585 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tagctcagtagtgaagaact 289 |||||||||||||||||||| Sbjct: 46062 tagctcagtagtgaagaact 46043
>gb|AC010956.12|AC010956 Homo sapiens, clone RP11-5N23, complete sequence Length = 163805 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||||||||||||||||| ||||| Sbjct: 143023 atttgtttgtagtgagaatattta 143046
>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence Length = 138778 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgtgtgcatgttgttgttct 182 |||||||||||||||||||| Sbjct: 66213 tgtgtgcatgttgttgttct 66232
>gb|AC129501.3| Homo sapiens chromosome 11, clone RP11-1095K7, complete sequence Length = 179540 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggtgcactggtttggtgttg 128 |||||||||||||||||||| Sbjct: 164011 ggtgcactggtttggtgttg 163992
>gb|AC092882.3| Homo sapiens 12 BAC RP11-544L17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 49997 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 10053 atttctttgtagtgagaacattta 10030
>gb|AC135964.2| Mus musculus BAC clone RP23-306G18 from chromosome 16, complete sequence Length = 179599 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gctcagtagtgaagaactgc 291 |||||||||||||||||||| Sbjct: 58411 gctcagtagtgaagaactgc 58392
>emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chromosome X, complete sequence Length = 227248 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tttgctgtaatctgaatcct 264 |||||||||||||||||||| Sbjct: 15126 tttgctgtaatctgaatcct 15107
>dbj|AP006622.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1276E07, complete sequence Length = 114001 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggtgcactggtttggtgttg 128 |||||||||||||||||||| Sbjct: 59447 ggtgcactggtttggtgttg 59428
>gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q21, complete sequence Length = 226916 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 215310 atttctttgtagtgagaacattta 215333
>emb|BX470117.7| Zebrafish DNA sequence from clone CH211-204N10 in linkage group 19, complete sequence Length = 169993 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 tttgtttgtagtgagaacat 205 |||||||||||||||||||| Sbjct: 147544 tttgtttgtagtgagaacat 147563
>gb|AY940097.1| Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 4 (XRCC4) gene, complete cds Length = 279061 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||||| ||||||||||||||||| Sbjct: 88461 atttgtgtgtagtgagaacattta 88438
>gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence Length = 83030 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 81690 atttctttgtagtgagaacattta 81667
>gb|AC174075.1| Homo sapiens chromosome 10 clone WI2-3242N3, complete sequence Length = 40411 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaaca 204 |||||||||||||||||||| Sbjct: 14470 atttgtttgtagtgagaaca 14451
>emb|AL133273.5| Human DNA sequence from clone RP11-518F7 on chromosome Xq26.3-27.3, complete sequence Length = 42375 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 aatttgtttgtagtgagaacattt 207 ||||| |||||||||||||||||| Sbjct: 9785 aatttttttgtagtgagaacattt 9808
>emb|X56452.1|HSCYP2C Human CYP2C gene for cytochrome P-450 Length = 2619 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 1354 atttctttgtagtgagaacattta 1377
>emb|AL158219.11| Human DNA sequence from clone RP5-876B19 on chromosome 11, complete sequence Length = 48412 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 12417 atttttttgtagtgagaacattta 12394
>gb|S63419.1|S63419S1 Homo sapiens (S)-mephenytoin hydroxylase associated cytochrome P450 (CYP2C18) gene, partial sequence Length = 2619 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 1354 atttctttgtagtgagaacattta 1377
>gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, complete sequence Length = 179494 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atttgtttgtagtgagaacattta 208 |||| ||||||||||||||||||| Sbjct: 93783 atttttttgtagtgagaacattta 93806
>dbj|AB065505.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_68 Length = 60989 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggtgcactggtttggtgttg 128 |||||||||||||||||||| Sbjct: 40705 ggtgcactggtttggtgttg 40686
>emb|AL672035.7| Mouse DNA sequence from clone RP23-314N8 on chromosome X, complete sequence Length = 154002 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tagctcagtagtgaagaact 289 |||||||||||||||||||| Sbjct: 65768 tagctcagtagtgaagaact 65749 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,392,386 Number of Sequences: 3902068 Number of extensions: 3392386 Number of successful extensions: 66057 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65937 Number of HSP's gapped (non-prelim): 120 length of query: 333 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 311 effective length of database: 17,147,199,772 effective search space: 5332779129092 effective search space used: 5332779129092 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
