Clone Name | basde19 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK069911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038A05, full insert sequence Length = 1616 Score = 567 bits (286), Expect = e-158 Identities = 454/510 (89%) Strand = Plus / Plus Query: 52 ccaagccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagca 111 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 127 ccaagccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagca 186 Query: 112 cctcaagcgcctggccgccatcgacctgcacatcctctccgcccaggtaacacaatcgac 171 |||||||||||| |||| |||||||| || ||||||||||||||||| ||||||||||| Sbjct: 187 cctcaagcgcctcgccggtatcgacctccagatcctctccgcccaggttacacaatcgac 246 Query: 172 ggattttgcggagcttgtaaaccagcatccatggctgtcgaccaccaaactggttgtgaa 231 ||| || | ||||| ||||||||||| ||||||||||| |||| || |||| ||||| Sbjct: 247 ggacttcacagagctggtaaaccagcagccatggctgtcaaccatgaagttggtcgtgaa 306 Query: 232 gcctgacatgctgttcgggaagcgtgggaagagtggacttgtggcactcaacctggatgt 291 ||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| | Sbjct: 307 gcccgacatgctgttcgggaagcgtggcaagagcggacttgtggccctcaacctagatat 366 Query: 292 agcccaagtcaaggagtttgtgaaggatcggttgggagttgaggttgagatgggcgtctg 351 || ||||||||||||||||||||||| || ||||||||||||| |||||||| | ||| Sbjct: 367 tgctcaagtcaaggagtttgtgaaggagaggctgggagttgaggtcgagatgggtggctg 426 Query: 352 caaagctccaattaccacctttatagttgagccgtttgtcccccacgatcaagaatacta 411 ||| |||||||| |||||||| || || ||||| ||||| ||||| |||||||||||||| Sbjct: 427 caaggctccaatcaccaccttcattgtggagccatttgtaccccatgatcaagaatacta 486 Query: 412 tctttcaattgtgtccgaaaggttgggtagcaccattagcttctcggaatgtggaggcat 471 ||||| ||||| || || ||| |||| ||||||||||||||||||||||||||||| || Sbjct: 487 cctttctattgtctcggagaggctgggcagcaccattagcttctcggaatgtggaggaat 546 Query: 472 tgaaatcgaggaaaactgggacaaggttaagacagtctttcttccgactgagaagccaat 531 ||||| ||||| ||||||||||||||||||||| | |||||||| |||||||||||||| Sbjct: 547 agaaattgaggagaactgggacaaggttaagacaatttttcttcccactgagaagccaat 606 Query: 532 gacacctgatgcttgtgctcccttgattgc 561 |||||||||||| ||||||||||||||||| Sbjct: 607 gacacctgatgcatgtgctcccttgattgc 636
>dbj|AK061978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A05, full insert sequence Length = 1611 Score = 545 bits (275), Expect = e-152 Identities = 449/507 (88%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136 agccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacct 195 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggtaacacaatcgacgga 174 ||||||||| |||| |||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 196 caagcgcctcgccggtatcgacctccagatcctctccgcccaggttacacaatcgacgga 255 Query: 175 ttttgcggagcttgtaaaccagcatccatggctgtcgaccaccaaactggttgtgaagcc 234 || | ||||| ||||||||||| ||||||||||| |||| || |||| |||||||| Sbjct: 256 cttcacagagctggtaaaccagcagccatggctgtcaaccatgaagttggtcgtgaagcc 315 Query: 235 tgacatgctgttcgggaagcgtgggaagagtggacttgtggcactcaacctggatgtagc 294 ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| | || Sbjct: 316 cgacatgctgttcgggaagcgtggcaagagcggacttgtggccctcaacctagatattgc 375 Query: 295 ccaagtcaaggagtttgtgaaggatcggttgggagttgaggttgagatgggcgtctgcaa 354 ||||||||||||||||||||||| || ||||||||||||| |||||||| | |||||| Sbjct: 376 tcaagtcaaggagtttgtgaaggagaggctgggagttgaggtcgagatgggtggctgcaa 435 Query: 355 agctccaattaccacctttatagttgagccgtttgtcccccacgatcaagaatactatct 414 ||||||||| |||||||| || || ||||| ||||| ||||| |||||||||||||| || Sbjct: 436 agctccaatcaccaccttcattgtggagccatttgtaccccatgatcaagaatactacct 495 Query: 415 ttcaattgtgtccgaaaggttgggtagcaccattagcttctcggaatgtggaggcattga 474 ||| ||||| || || ||| |||| ||||||||||||||||| || |||||||| || || Sbjct: 496 ttctattgtctcggagaggctgggcagcaccattagcttctcagagtgtggaggaataga 555 Query: 475 aatcgaggaaaactgggacaaggttaagacagtctttcttccgactgagaagccaatgac 534 ||| ||||| ||||||||||||||||||||| | |||||| | ||||||||||||||||| Sbjct: 556 aattgaggagaactgggacaaggttaagacaatttttctttccactgagaagccaatgac 615 Query: 535 acctgatgcttgtgctcccttgattgc 561 ||||||||| ||||||||||||||||| Sbjct: 616 acctgatgcatgtgctcccttgattgc 642
>gb|AY108793.1| Zea mays PCO080711 mRNA sequence Length = 1790 Score = 387 bits (195), Expect = e-104 Identities = 426/503 (84%) Strand = Plus / Plus Query: 59 atggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacctcaag 118 |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 198 atggcgcggaagaagatccgggagtacgactccaagcgcctcctccgggagcacctcaag 257 Query: 119 cgcctggccgccatcgacctgcacatcctctccgcccaggtaacacaatcgacggatttt 178 ||||| |||| ||||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 258 cgcctcgccggcatcgacctccagatcctctccgcgcaggtcacacagtcaacggatttc 317 Query: 179 gcggagcttgtaaaccagcatccatggctgtcgaccaccaaactggttgtgaagcctgac 238 | ||||||| ||||||| | || ||||| || | | || |||||||||| |||||| Sbjct: 318 actgagcttgcaaaccaggagccgtggctctcatctatgaagttggttgtgaaacctgac 377 Query: 239 atgctgttcgggaagcgtgggaagagtggacttgtggcactcaacctggatgtagcccaa 298 ||||| || ||||| |||||||||||||| |||||||| |||||||| ||| | |||||| Sbjct: 378 atgctctttgggaaacgtgggaagagtgggcttgtggccctcaacctagatcttgcccaa 437 Query: 299 gtcaaggagtttgtgaaggatcggttgggagttgaggttgagatgggcgtctgcaaagct 358 || | ||||| ||||| ||||||||||||||||| |||||||| | |||||||||| Sbjct: 438 gttcgccaatttgtcaaggagcggttgggagttgaggtcgagatgggtggctgcaaagct 497 Query: 359 ccaattaccacctttatagttgagccgtttgtcccccacgatcaagaatactatctttca 418 |||||||| ||||| |||||||| || ||||| || || || ||||| ||||| ||||| Sbjct: 498 ccaattacaaccttcatagttgaaccatttgtgccacatgaccaagagtactacctttcg 557 Query: 419 attgtgtccgaaaggttgggtagcaccattagcttctcggaatgtggaggcattgaaatc 478 ||||| || |||||| | || | ||||||||| ||||| ||||||||||| ||||| ||| Sbjct: 558 attgtatctgaaaggcttggcaacaccattagtttctcagaatgtggaggtattgagatc 617 Query: 479 gaggaaaactgggacaaggttaagacagtctttcttccgactgagaagccaatgacacct 538 ||||| |||||||||||||||||||| |||||||||| || ||||||| |||||||||| Sbjct: 618 gaggagaactgggacaaggttaagactatctttcttcccacagagaagcaaatgacacct 677 Query: 539 gatgcttgtgctcccttgattgc 561 || || |||||||| |||||||| Sbjct: 678 gacgcatgtgctccattgattgc 700
>dbj|AK062236.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E02, full insert sequence Length = 1613 Score = 379 bits (191), Expect = e-102 Identities = 428/507 (84%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||| Sbjct: 133 agccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacct 192 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggtaacacaatcgacgga 174 ||||||||| |||||||||||||| |||||||||||||||||||| || |||| || || Sbjct: 193 caagcgcctcgccgccatcgacctccacatcctctccgcccaggtcacggaatcaactga 252 Query: 175 ttttgcggagcttgtaaaccagcatccatggctgtcgaccaccaaactggttgtgaagcc 234 ||| | ||||| || ||||| | |||||||| ||| | | || |||||||||| || Sbjct: 253 tttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttggttgtgaaacc 312 Query: 235 tgacatgctgttcgggaagcgtgggaagagtggacttgtggcactcaacctggatgtagc 294 ||||||||||| || || |||||||||||||| |||||||| |||||||| ||| | || Sbjct: 313 cgacatgctgtttggcaaacgtgggaagagtggccttgtggccctcaacctagatcttgc 372 Query: 295 ccaagtcaaggagtttgtgaaggatcggttgggagttgaggttgagatgggcgtctgcaa 354 |||||| | || || || || |||||||||||||||||||||||||| | |||||| Sbjct: 373 tcaagtccgccaattcgtcaaagagcggttgggagttgaggttgagatgggtggctgcaa 432 Query: 355 agctccaattaccacctttatagttgagccgtttgtcccccacgatcaagaatactatct 414 ||||| ||||| || || ||||||||||| ||||| || || |||||||| |||||||| Sbjct: 433 ggctcctattacaacattcatagttgagccatttgttccacatgatcaagagtactatct 492 Query: 415 ttcaattgtgtccgaaaggttgggtagcaccattagcttctcggaatgtggaggcattga 474 ||| ||||| || || ||| | ||| |||||||||||||||||| |||||||| ||||| Sbjct: 493 ttctattgtatcagagaggcttggttccaccattagcttctcggagtgtggaggtattga 552 Query: 475 aatcgaggaaaactgggacaaggttaagacagtctttcttccgactgagaagccaatgac 534 |||||||| |||||||| ||||| |||||||| |||||||| || ||||| ||||||| Sbjct: 553 gatcgaggagaactgggataaggtcaagacagtttttcttcccaccgagaaagcaatgac 612 Query: 535 acctgatgcttgtgctcccttgattgc 561 ||||||||| |||||||| |||||||| Sbjct: 613 acctgatgcgtgtgctccattgattgc 639
>gb|BT016561.1| Zea mays clone Contig394 mRNA sequence Length = 1630 Score = 373 bits (188), Expect = e-100 Identities = 422/500 (84%) Strand = Plus / Plus Query: 62 gcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacctcaagcgc 121 ||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 85 gcgcggaagaagatccgggagtacgactccaagcgcctcctccgggagcacctcaagcgc 144 Query: 122 ctggccgccatcgacctgcacatcctctccgcccaggtaacacaatcgacggattttgcg 181 || |||| ||||||||| || ||||||||||| ||||| ||||| || |||||||| | Sbjct: 145 ctcgccggcatcgacctccagatcctctccgcgcaggtcacacagtcaacggatttcact 204 Query: 182 gagcttgtaaaccagcatccatggctgtcgaccaccaaactggttgtgaagcctgacatg 241 ||||||| ||||||| | || ||||| || | | || |||||||||| ||||||||| Sbjct: 205 gagcttgcaaaccaggagccgtggctctcatctatgaagttggttgtgaaacctgacatg 264 Query: 242 ctgttcgggaagcgtgggaagagtggacttgtggcactcaacctggatgtagcccaagtc 301 || || ||||| |||||||||||||| |||||||| |||||||| ||| | |||||||| Sbjct: 265 ctctttgggaaacgtgggaagagtgggcttgtggccctcaacctagatcttgcccaagtt 324 Query: 302 aaggagtttgtgaaggatcggttgggagttgaggttgagatgggcgtctgcaaagctcca 361 | ||||| ||||| ||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 325 cgccaatttgtcaaggagcggttgggagttgaggtcgagatgggtggctgcaaagctcca 384 Query: 362 attaccacctttatagttgagccgtttgtcccccacgatcaagaatactatctttcaatt 421 ||||| ||||| |||||||| || ||||| || || || ||||| ||||| ||||| ||| Sbjct: 385 attacaaccttcatagttgaaccatttgtgccacatgaccaagagtactacctttcgatt 444 Query: 422 gtgtccgaaaggttgggtagcaccattagcttctcggaatgtggaggcattgaaatcgag 481 || || |||||| | || | ||||||||| ||||| ||||||||| | ||||| |||||| Sbjct: 445 gtatctgaaaggcttggcaacaccattagtttctcagaatgtggacgtattgagatcgag 504 Query: 482 gaaaactgggacaaggttaagacagtctttcttccgactgagaagccaatgacacctgat 541 || |||||||||||||||||||| |||||||||| || ||||||| |||||||||||| Sbjct: 505 gagaactgggacaaggttaagactatctttcttcccacagagaagcaaatgacacctgac 564 Query: 542 gcttgtgctcccttgattgc 561 || |||||||| |||||||| Sbjct: 565 gcatgtgctccattgattgc 584
>dbj|AK071114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078F10, full insert sequence Length = 1739 Score = 371 bits (187), Expect = 2e-99 Identities = 427/507 (84%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||| Sbjct: 134 agccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacct 193 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggtaacacaatcgacgga 174 ||||||||| |||||||||||||| |||||||||||||||||||| || |||| || || Sbjct: 194 caagcgcctcgccgccatcgacctccacatcctctccgcccaggtcacggaatcaactga 253 Query: 175 ttttgcggagcttgtaaaccagcatccatggctgtcgaccaccaaactggttgtgaagcc 234 ||| | ||||| || ||||| | |||||||| ||| | | || |||||||||| || Sbjct: 254 tttcacagagctcgtcaaccaagagccatggctctcgtctatgaagttggttgtgaaacc 313 Query: 235 tgacatgctgttcgggaagcgtgggaagagtggacttgtggcactcaacctggatgtagc 294 |||||||| || || || |||||||||||||| |||||||| |||||||| ||| | || Sbjct: 314 cgacatgctatttggcaaacgtgggaagagtggccttgtggccctcaacctagatcttgc 373 Query: 295 ccaagtcaaggagtttgtgaaggatcggttgggagttgaggttgagatgggcgtctgcaa 354 |||||| | || || || || |||||||||||||||||||||||||| | |||||| Sbjct: 374 tcaagtccgccaattcgtcaaagagcggttgggagttgaggttgagatgggtggctgcaa 433 Query: 355 agctccaattaccacctttatagttgagccgtttgtcccccacgatcaagaatactatct 414 ||||| ||||| || || ||||||||||| ||||| || || |||||||| |||||||| Sbjct: 434 ggctcctattacaacattcatagttgagccatttgttccacatgatcaagagtactatct 493 Query: 415 ttcaattgtgtccgaaaggttgggtagcaccattagcttctcggaatgtggaggcattga 474 ||| ||||| || || ||| | ||| |||||||||||||||||| |||||||| ||||| Sbjct: 494 ttctattgtatcagagaggcttggttccaccattagcttctcggagtgtggaggtattga 553 Query: 475 aatcgaggaaaactgggacaaggttaagacagtctttcttccgactgagaagccaatgac 534 |||||||| |||||||| ||||| |||||||| |||||||| || ||||| ||||||| Sbjct: 554 gatcgaggagaactgggataaggtcaagacagtttttcttcccaccgagaaagcaatgac 613 Query: 535 acctgatgcttgtgctcccttgattgc 561 ||||||||| |||||||| |||||||| Sbjct: 614 acctgatgcgtgtgctccattgattgc 640
>gb|BT009069.1| Triticum aestivum clone wia1c.pk001.d20:fis, full insert mRNA sequence Length = 1535 Score = 353 bits (178), Expect = 4e-94 Identities = 424/506 (83%) Strand = Plus / Plus Query: 56 gccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacctc 115 ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 69 gccatggcgcggaagaagatccgggagtacgactccaagcgcctcctcaaggagcacctg 128 Query: 116 aagcgcctggccgccatcgacctgcacatcctctccgcccaggtaacacaatcgacggat 175 |||||||| || | ||||||||| || ||||||||||| ||||| |||||||| |||||| Sbjct: 129 aagcgcctcgcaggcatcgacctccagatcctctccgcgcaggtcacacaatcaacggat 188 Query: 176 tttgcggagcttgtaaaccagcatccatggctgtcgaccaccaaactggttgtgaagcct 235 || |||||||| ||||||| | |||||||| ||| | | || ||||||| || ||| Sbjct: 189 ttcacggagctttcaaaccaggagccatggctctcgtcgatgaagttggttgttaaacct 248 Query: 236 gacatgctgttcgggaagcgtgggaagagtggacttgtggcactcaacctggatgtagcc 295 ||||||||||| || ||||||||||||||||| ||||| || |||||||| ||| || Sbjct: 249 gacatgctgtttggcaagcgtgggaagagtggccttgtagccctcaacctagatcgtgct 308 Query: 296 caagtcaaggagtttgtgaaggatcggttgggagttgaggttgagatgggcgtctgcaaa 355 |||||| | ||||| ||||| || || ||||||||||| |||||||| | || || Sbjct: 309 caagtccgccaatttgtcaaggagcgattaggagttgaggtcgagatgggtggatgtaag 368 Query: 356 gctccaattaccacctttatagttgagccgtttgtcccccacgatcaagaatactatctt 415 ||||||||||| || || ||||| ||||| ||||| || ||||||||||| || ||||| Sbjct: 369 gctccaattacaacattcatagtcgagccatttgtgccacacgatcaagagtattatctc 428 Query: 416 tcaattgtgtccgaaaggttgggtagcaccattagcttctcggaatgtggaggcattgaa 475 |||||| |||| || ||| | ||| |||||||||| ||||| || ||||| || ||||| Sbjct: 429 tcaattatgtcagacaggcttggttgcaccattagtttctcagagtgtggtggtattgag 488 Query: 476 atcgaggaaaactgggacaaggttaagacagtctttcttccgactgagaagccaatgaca 535 || ||||| ||||||||||||||||||||| |||||||||| || ||||||||||||||| Sbjct: 489 attgaggagaactgggacaaggttaagacaatctttcttccaacagagaagccaatgaca 548 Query: 536 cctgatgcttgtgctcccttgattgc 561 | |||||| || ||||| |||||||| Sbjct: 549 cttgatgcatgcgctccattgattgc 574
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 248 bits (125), Expect = 2e-62 Identities = 203/229 (88%) Strand = Plus / Plus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 |||| |||||||| | |||||| |||||||| |||||||| || || ||||| ||||| | Sbjct: 27852038 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 27852097 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 |||| |||||||||||||| ||||| ||||| || || ||| |||| ||||||||||||| Sbjct: 27852098 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 27852157 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 |||||||||||||||| || ||||| ||||| ||||||||||||||||||||| | |||| Sbjct: 27852158 tctcggaatgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 27852217 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 |||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27852218 ttcccactgagaagccaatgacacctgatgcatgtgctcccttgattgc 27852266 Score = 224 bits (113), Expect = 2e-55 Identities = 200/229 (87%) Strand = Plus / Minus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 |||| |||||||| | |||||| |||||||| |||||||| || || ||||| ||||| | Sbjct: 27713565 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 27713506 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 |||| |||||||||||||| ||||| ||||| || || ||| |||| ||||||||||||| Sbjct: 27713505 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 27713446 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 |||| || |||||||| || ||||| ||||| ||||||||||||||||||||| | |||| Sbjct: 27713445 tctcagagtgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 27713386 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 || | |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27713385 tttccactgagaagccaatgacacctgatgcatgtgctcccttgattgc 27713337 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 156 aggtaacacaatcgacggattttgcggagcttgtaaaccagcatccatggctgtcgacca 215 |||| |||||||||||||| || | ||||| ||||||||||| ||||||||||| |||| Sbjct: 27851771 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 27851830 Query: 216 ccaaactggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtgg 275 || |||| |||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 27851831 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 27851890 Query: 276 cactcaacctggatgtagcccaagtcaaggagtttgtgaaggatcggttgggagttgagg 335 | |||||||| ||| | || ||||||||||||||||||||||| || |||||||||||| Sbjct: 27851891 ccctcaacctagatattgctcaagtcaaggagtttgtgaaggagaggctgggagttgagg 27851950 Query: 336 t 336 | Sbjct: 27851951 t 27851951 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Minus Query: 156 aggtaacacaatcgacggattttgcggagcttgtaaaccagcatccatggctgtcgacca 215 |||| |||||||||||||| || | ||||| ||||||||||| ||||||||||| |||| Sbjct: 27713832 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 27713773 Query: 216 ccaaactggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtgg 275 || |||| |||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 27713772 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 27713713 Query: 276 cactcaacctggatgtagcccaagtcaaggagtttgtgaaggatcggttgggagttgagg 335 | |||||||| ||| | || ||||||||||||||||||||||| || |||||||||||| Sbjct: 27713712 ccctcaacctagatattgctcaagtcaaggagtttgtgaaggagaggctgggagttgagg 27713653 Query: 336 t 336 | Sbjct: 27713652 t 27713652 Score = 167 bits (84), Expect = 5e-38 Identities = 102/108 (94%) Strand = Plus / Plus Query: 52 ccaagccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagca 111 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 27850815 ccaagccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagca 27850874 Query: 112 cctcaagcgcctggccgccatcgacctgcacatcctctccgcccaggt 159 |||||||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 27850875 cctcaagcgcctcgccggtatcgacctccagatcctctccgcccaggt 27850922 Score = 161 bits (81), Expect = 3e-36 Identities = 99/105 (94%) Strand = Plus / Minus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27714774 agccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacct 27714715 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggt 159 ||||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 27714714 caagcgcctcgccggtatcgacctccagatcctctccgcccaggt 27714670
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 248 bits (125), Expect = 2e-62 Identities = 203/229 (88%) Strand = Plus / Plus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 |||| |||||||| | |||||| |||||||| |||||||| || || ||||| ||||| | Sbjct: 27876026 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 27876085 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 |||| |||||||||||||| ||||| ||||| || || ||| |||| ||||||||||||| Sbjct: 27876086 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 27876145 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 |||||||||||||||| || ||||| ||||| ||||||||||||||||||||| | |||| Sbjct: 27876146 tctcggaatgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 27876205 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 |||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27876206 ttcccactgagaagccaatgacacctgatgcatgtgctcccttgattgc 27876254 Score = 224 bits (113), Expect = 2e-55 Identities = 200/229 (87%) Strand = Plus / Minus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 |||| |||||||| | |||||| |||||||| |||||||| || || ||||| ||||| | Sbjct: 27737553 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 27737494 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 |||| |||||||||||||| ||||| ||||| || || ||| |||| ||||||||||||| Sbjct: 27737493 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 27737434 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 |||| || |||||||| || ||||| ||||| ||||||||||||||||||||| | |||| Sbjct: 27737433 tctcagagtgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 27737374 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 || | |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27737373 tttccactgagaagccaatgacacctgatgcatgtgctcccttgattgc 27737325 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 156 aggtaacacaatcgacggattttgcggagcttgtaaaccagcatccatggctgtcgacca 215 |||| |||||||||||||| || | ||||| ||||||||||| ||||||||||| |||| Sbjct: 27875759 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 27875818 Query: 216 ccaaactggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtgg 275 || |||| |||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 27875819 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 27875878 Query: 276 cactcaacctggatgtagcccaagtcaaggagtttgtgaaggatcggttgggagttgagg 335 | |||||||| ||| | || ||||||||||||||||||||||| || |||||||||||| Sbjct: 27875879 ccctcaacctagatattgctcaagtcaaggagtttgtgaaggagaggctgggagttgagg 27875938 Query: 336 t 336 | Sbjct: 27875939 t 27875939 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Minus Query: 156 aggtaacacaatcgacggattttgcggagcttgtaaaccagcatccatggctgtcgacca 215 |||| |||||||||||||| || | ||||| ||||||||||| ||||||||||| |||| Sbjct: 27737820 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 27737761 Query: 216 ccaaactggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtgg 275 || |||| |||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 27737760 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 27737701 Query: 276 cactcaacctggatgtagcccaagtcaaggagtttgtgaaggatcggttgggagttgagg 335 | |||||||| ||| | || ||||||||||||||||||||||| || |||||||||||| Sbjct: 27737700 ccctcaacctagatattgctcaagtcaaggagtttgtgaaggagaggctgggagttgagg 27737641 Query: 336 t 336 | Sbjct: 27737640 t 27737640 Score = 167 bits (84), Expect = 5e-38 Identities = 102/108 (94%) Strand = Plus / Plus Query: 52 ccaagccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagca 111 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 27874803 ccaagccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagca 27874862 Query: 112 cctcaagcgcctggccgccatcgacctgcacatcctctccgcccaggt 159 |||||||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 27874863 cctcaagcgcctcgccggtatcgacctccagatcctctccgcccaggt 27874910 Score = 161 bits (81), Expect = 3e-36 Identities = 99/105 (94%) Strand = Plus / Minus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27738762 agccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacct 27738703 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggt 159 ||||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 27738702 caagcgcctcgccggtatcgacctccagatcctctccgcccaggt 27738658
>gb|AY112471.1| Zea mays CL718_1 mRNA sequence Length = 1590 Score = 244 bits (123), Expect = 3e-61 Identities = 225/259 (86%) Strand = Plus / Plus Query: 60 tggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacctcaagc 119 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 93 tggcgcgcaagaagatccgggagtacgactccaagcgcctcctcagggagcacctcaagc 152 Query: 120 gcctggccgccatcgacctgcacatcctctccgcccaggtaacacaatcgacggattttg 179 |||| |||| ||||||||| |||||||||||||||| | || ||||| ||||| || | Sbjct: 153 gcctcgccggcatcgacctcaccatcctctccgcccagatcacgcaatcaacggacttcg 212 Query: 180 cggagcttgtaaaccagcatccatggctgtcgaccaccaaactggttgtgaagcctgaca 239 |||||||||| | |||||| ||||||||||| |||| || || || ||||||||||| | Sbjct: 213 cggagcttgtgagccagcagccatggctgtcaaccatgaagctagtggtgaagcctgata 272 Query: 240 tgctgttcgggaagcgtgggaagagtggacttgtggcactcaacctggatgtagcccaag 299 ||||||||||||||||||||||||| || || ||||| |||||| ||||| | |||| Sbjct: 273 tgctgttcgggaagcgtgggaagagcggcctcgtggctctcaacttggatttcaatcaag 332 Query: 300 tcaaggagtttgtgaagga 318 ||||||||||||| ||||| Sbjct: 333 tcaaggagtttgtcaagga 351 Score = 153 bits (77), Expect = 7e-34 Identities = 179/213 (84%) Strand = Plus / Plus Query: 350 tgcaaagctccaattaccacctttatagttgagccgtttgtcccccacgatcaagaatac 409 ||||| |||||||| || ||||| || || ||||| ||||| || || |||||||| ||| Sbjct: 383 tgcaaggctccaatcacgaccttcatcgtcgagccatttgtgccacatgatcaagagtac 442 Query: 410 tatctttcaattgtgtccgaaaggttgggtagcaccattagcttctcggaatgtggaggc 469 || ||||| ||||| || || |||||||| |||||||| |||||||| || |||||||| Sbjct: 443 tacctttcgattgtctcagagaggttgggcagcaccatcagcttctcagagtgtggaggg 502 Query: 470 attgaaatcgaggaaaactgggacaaggttaagacagtctttcttccgactgagaagcca 529 ||||| || ||||| |||||||||||||||||||| | || ||||| |||||||||||| Sbjct: 503 attgagattgaggagaactgggacaaggttaagactattttccttcctactgagaagcca 562 Query: 530 atgacacctgatgcttgtgctcccttgattgca 562 ||||| ||||| | |||||||| ||||||||| Sbjct: 563 atgacgtctgattcatgtgctcctttgattgca 595
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 224 bits (113), Expect = 2e-55 Identities = 200/229 (87%) Strand = Plus / Plus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 |||| |||||||| | |||||| |||||||| |||||||| || || ||||| ||||| | Sbjct: 8408 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 8467 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 |||| |||||||||||||| ||||| ||||| || || ||| |||| ||||||||||||| Sbjct: 8468 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 8527 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 |||| || |||||||| || ||||| ||||| ||||||||||||||||||||| | |||| Sbjct: 8528 tctcagagtgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 8587 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 || | |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 8588 tttccactgagaagccaatgacacctgatgcatgtgctcccttgattgc 8636 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 156 aggtaacacaatcgacggattttgcggagcttgtaaaccagcatccatggctgtcgacca 215 |||| |||||||||||||| || | ||||| ||||||||||| ||||||||||| |||| Sbjct: 8141 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 8200 Query: 216 ccaaactggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtgg 275 || |||| |||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 8201 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 8260 Query: 276 cactcaacctggatgtagcccaagtcaaggagtttgtgaaggatcggttgggagttgagg 335 | |||||||| ||| | || ||||||||||||||||||||||| || |||||||||||| Sbjct: 8261 ccctcaacctagatattgctcaagtcaaggagtttgtgaaggagaggctgggagttgagg 8320 Query: 336 t 336 | Sbjct: 8321 t 8321 Score = 161 bits (81), Expect = 3e-36 Identities = 99/105 (94%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 7199 agccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacct 7258 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggt 159 ||||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 7259 caagcgcctcgccggtatcgacctccagatcctctccgcccaggt 7303
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21 map R3342S, complete sequence Length = 133790 Score = 224 bits (113), Expect = 2e-55 Identities = 200/229 (87%) Strand = Plus / Plus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 |||| |||||||| | |||||| |||||||| |||||||| || || ||||| ||||| | Sbjct: 132106 aggtcgagatgggtggctgcaaggctccaatcaccaccttcattgtggagccatttgtac 132165 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 |||| |||||||||||||| ||||| ||||| || || ||| |||| ||||||||||||| Sbjct: 132166 cccatgatcaagaatactacctttctattgtctcggagaggctgggcagcaccattagct 132225 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 |||| || |||||||| || ||||| ||||| ||||||||||||||||||||| | |||| Sbjct: 132226 tctcagagtgtggaggaatagaaattgaggagaactgggacaaggttaagacaatttttc 132285 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 || | |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132286 tttccactgagaagccaatgacacctgatgcatgtgctcccttgattgc 132334 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 156 aggtaacacaatcgacggattttgcggagcttgtaaaccagcatccatggctgtcgacca 215 |||| |||||||||||||| || | ||||| ||||||||||| ||||||||||| |||| Sbjct: 131839 aggttacacaatcgacggacttcacagagctggtaaaccagcagccatggctgtcaacca 131898 Query: 216 ccaaactggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtgg 275 || |||| |||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 131899 tgaagttggtcgtgaagcccgacatgctgttcgggaagcgtggcaagagcggacttgtgg 131958 Query: 276 cactcaacctggatgtagcccaagtcaaggagtttgtgaaggatcggttgggagttgagg 335 | |||||||| ||| | || ||||||||||||||||||||||| || |||||||||||| Sbjct: 131959 ccctcaacctagatattgctcaagtcaaggagtttgtgaaggagaggctgggagttgagg 132018 Query: 336 t 336 | Sbjct: 132019 t 132019 Score = 161 bits (81), Expect = 3e-36 Identities = 99/105 (94%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130897 agccatggcgcgcaagaagatccgggagtacgactccaagcgcctcctcaaggagcacct 130956 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggt 159 ||||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 130957 caagcgcctcgccggtatcgacctccagatcctctccgcccaggt 131001
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 192 bits (97), Expect = 9e-46 Identities = 196/229 (85%) Strand = Plus / Plus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 ||||||||||||| | |||||| ||||| ||||| || || ||||||||||| ||||| | Sbjct: 23310471 aggttgagatgggtggctgcaaggctcctattacaacattcatagttgagccatttgttc 23310530 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 | || |||||||| ||||||||||| ||||| || || ||| | ||| ||||||||||| Sbjct: 23310531 cacatgatcaagagtactatctttctattgtatcagagaggcttggttccaccattagct 23310590 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 ||||||| |||||||| ||||| |||||||| |||||||| ||||| |||||||| |||| Sbjct: 23310591 tctcggagtgtggaggtattgagatcgaggagaactgggataaggtcaagacagtttttc 23310650 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 |||| || ||||| |||||||||||||||| |||||||| |||||||| Sbjct: 23310651 ttcccaccgagaaagcaatgacacctgatgcgtgtgctccattgattgc 23310699 Score = 163 bits (82), Expect = 8e-37 Identities = 100/106 (94%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||| Sbjct: 23308989 agccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacct 23309048 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggta 160 ||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 23309049 caagcgcctcgccgccatcgacctccacatcctctccgcccaggta 23309094 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 222 tggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtggcactca 281 |||||||||| || ||||||||||| || || |||||||||||||| |||||||| |||| Sbjct: 23310276 tggttgtgaaacccgacatgctgtttggcaaacgtgggaagagtggccttgtggccctca 23310335 Query: 282 acct 285 |||| Sbjct: 23310336 acct 23310339
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 192 bits (97), Expect = 9e-46 Identities = 196/229 (85%) Strand = Plus / Plus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 ||||||||||||| | |||||| ||||| ||||| || || ||||||||||| ||||| | Sbjct: 23238662 aggttgagatgggtggctgcaaggctcctattacaacattcatagttgagccatttgttc 23238721 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 | || |||||||| ||||||||||| ||||| || || ||| | ||| ||||||||||| Sbjct: 23238722 cacatgatcaagagtactatctttctattgtatcagagaggcttggttccaccattagct 23238781 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 ||||||| |||||||| ||||| |||||||| |||||||| ||||| |||||||| |||| Sbjct: 23238782 tctcggagtgtggaggtattgagatcgaggagaactgggataaggtcaagacagtttttc 23238841 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 |||| || ||||| |||||||||||||||| |||||||| |||||||| Sbjct: 23238842 ttcccaccgagaaagcaatgacacctgatgcgtgtgctccattgattgc 23238890 Score = 163 bits (82), Expect = 8e-37 Identities = 100/106 (94%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||| Sbjct: 23237180 agccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacct 23237239 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggta 160 ||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 23237240 caagcgcctcgccgccatcgacctccacatcctctccgcccaggta 23237285 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 222 tggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtggcactca 281 |||||||||| || ||||||||||| || || |||||||||||||| |||||||| |||| Sbjct: 23238467 tggttgtgaaacccgacatgctgtttggcaaacgtgggaagagtggccttgtggccctca 23238526 Query: 282 acct 285 |||| Sbjct: 23238527 acct 23238530
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 192 bits (97), Expect = 9e-46 Identities = 196/229 (85%) Strand = Plus / Plus Query: 333 aggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtcc 392 ||||||||||||| | |||||| ||||| ||||| || || ||||||||||| ||||| | Sbjct: 123589 aggttgagatgggtggctgcaaggctcctattacaacattcatagttgagccatttgttc 123648 Query: 393 cccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagct 452 | || |||||||| ||||||||||| ||||| || || ||| | ||| ||||||||||| Sbjct: 123649 cacatgatcaagagtactatctttctattgtatcagagaggcttggttccaccattagct 123708 Query: 453 tctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtctttc 512 ||||||| |||||||| ||||| |||||||| |||||||| ||||| |||||||| |||| Sbjct: 123709 tctcggagtgtggaggtattgagatcgaggagaactgggataaggtcaagacagtttttc 123768 Query: 513 ttccgactgagaagccaatgacacctgatgcttgtgctcccttgattgc 561 |||| || ||||| |||||||||||||||| |||||||| |||||||| Sbjct: 123769 ttcccaccgagaaagcaatgacacctgatgcgtgtgctccattgattgc 123817 Score = 163 bits (82), Expect = 8e-37 Identities = 100/106 (94%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||| Sbjct: 122107 agccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacct 122166 Query: 115 caagcgcctggccgccatcgacctgcacatcctctccgcccaggta 160 ||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 122167 caagcgcctcgccgccatcgacctccacatcctctccgcccaggta 122212 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 222 tggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtggacttgtggcactca 281 |||||||||| || ||||||||||| || || |||||||||||||| |||||||| |||| Sbjct: 123394 tggttgtgaaacccgacatgctgtttggcaaacgtgggaagagtggccttgtggccctca 123453 Query: 282 acct 285 |||| Sbjct: 123454 acct 123457
>gb|AY020401.1| Oryza sativa microsatellite MRG2726 containing (GA)X16, genomic sequence Length = 232 Score = 137 bits (69), Expect = 4e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 55 agccatggcgcgcaagaagattcgggagtacgactccaagcgcctcctcaaggagcacct 114 |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||| Sbjct: 140 agccatggcgcggaagaagatccgggagtacgactccaagcgcctcctaagggagcacct 199 Query: 115 caagcgcctggccgccatcgacctgcacatcct 147 ||||||||| |||||||||||||| |||||||| Sbjct: 200 caagcgcctcgccgccatcgacctccacatcct 232
>gb|BT014017.1| Lycopersicon esculentum clone 133079F, mRNA sequence Length = 1686 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Plus Query: 332 gaggttgagatgggcgtctgcaaagctccaattaccacctttatagttgagccgtttgtc 391 |||||||| ||||| | |||||| || || || || || ||||| ||||| || ||||| Sbjct: 532 gaggttgaaatgggtggctgcaaggcacctataacaacatttattgttgaaccatttgtt 591 Query: 392 ccccacgatcaagaatactatctttcaattgtgtccgaaaggttgggtagcaccattagc 451 ||||| || |||||||| || ||||| || || || ||||||||||| |||| |||||| Sbjct: 592 ccccatgaccaagaatattacctttccatagtctctgaaaggttgggctgcacaattagc 651 Query: 452 ttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagacagtcttt 511 || || ||||||||||||||||| || || || |||||||||||||| |||||| | || Sbjct: 652 ttttcagaatgtggaggcattgagattgaagagaactgggacaaggtcaagacaatattc 711 Query: 512 cttccgactgagaagccaatgac 534 ||||| || ||||| || ||||| Sbjct: 712 cttccaacggagaaacctatgac 734 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 221 ctggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtgg 267 |||||||| || || ||||||||||| || |||||||| |||||||| Sbjct: 421 ctggttgtaaaaccagacatgctgtttggaaagcgtggaaagagtgg 467
>ref|NM_104764.2| Arabidopsis thaliana ACLA-2 AT1G60810 (ACLA-2) mRNA, complete cds Length = 1457 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 445 cattagcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagac 504 ||||||||| ||||| |||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 439 cattagcttttcggagtgtggaggaattgacatcgaggagaactgggacaaggtcaagac 498
>gb|AY128741.1| Arabidopsis thaliana similar to ATP-citrate-lyase (At1g60810) mRNA, complete cds Length = 1339 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 445 cattagcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagac 504 ||||||||| ||||| |||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 387 cattagcttttcggagtgtggaggaattgacatcgaggagaactgggacaaggtcaagac 446
>gb|AY081273.1| Arabidopsis thaliana similar to ATP-citrate-lyase (At1g60810) mRNA, complete cds Length = 1457 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 445 cattagcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagac 504 ||||||||| ||||| |||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 439 cattagcttttcggagtgtggaggaattgacatcgaggagaactgggacaaggtcaagac 498
>emb|BX816254.1|CNS0AD98 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1390 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 445 cattagcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagac 504 ||||||||| ||||| |||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 417 cattagcttttcggagtgtggaggaattgacatcgaggagaactgggacaaggtcaagac 476
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 445 cattagcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggt 498 ||||||||| ||||| |||||||| ||||| |||||||| |||||||||||||| Sbjct: 114379 cattagcttttcggagtgtggaggaattgacatcgaggagaactgggacaaggt 114326
>ref|NM_179303.1| Arabidopsis thaliana ACLA-1 AT1G10670 (ACLA-1) transcript variant AT1G10670.2 mRNA, complete cds Length = 1528 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 461 tgtggaggcattgaaatcgaggaaaactgggacaaggttaagaca 505 |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 477 tgtggaggaattgagatcgaggagaactgggacaaggtcaagaca 521
>ref|NM_100943.2| Arabidopsis thaliana ACLA-1 AT1G10670 (ACLA-1) transcript variant AT1G10670.1 mRNA, complete cds Length = 1536 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 461 tgtggaggcattgaaatcgaggaaaactgggacaaggttaagaca 505 |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 484 tgtggaggaattgagatcgaggagaactgggacaaggtcaagaca 528
>gb|AY113979.1| Arabidopsis thaliana putative ATP citrate-lyase (At1g10670) mRNA, complete cds Length = 1303 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 461 tgtggaggcattgaaatcgaggaaaactgggacaaggttaagaca 505 |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 403 tgtggaggaattgagatcgaggagaactgggacaaggtcaagaca 447
>gb|AY056213.1| Arabidopsis thaliana putative ATP citrate-lyase (At1g10670) mRNA, complete cds Length = 1519 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 461 tgtggaggcattgaaatcgaggaaaactgggacaaggttaagaca 505 |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 462 tgtggaggaattgagatcgaggagaactgggacaaggtcaagaca 506
>gb|AY094479.1| Arabidopsis thaliana At1g10670/F20B24_11 mRNA, complete cds Length = 1517 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 461 tgtggaggcattgaaatcgaggaaaactgggacaaggttaagaca 505 |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 465 tgtggaggaattgagatcgaggagaactgggacaaggtcaagaca 509
>gb|AY056593.1| Arabidopsis thaliana ATP-citrate lyase subunit A mRNA, complete cds Length = 1517 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 461 tgtggaggcattgaaatcgaggaaaactgggacaaggttaagaca 505 |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 453 tgtggaggaattgagatcgaggagaactgggacaaggtcaagaca 497
>gb|AY087536.1| Arabidopsis thaliana clone 36439 mRNA, complete sequence Length = 1532 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 461 tgtggaggcattgaaatcgaggaaaactgggacaaggttaagaca 505 |||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 484 tgtggaggaattgagatcgaggagaactgggacaaggtcaagaca 528
>dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10B11, TM0008, complete sequence Length = 116223 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 222 tggttgtgaagcctgacatgctgttcgggaagcgtgggaagag 264 |||||||||| ||||||||| |||| ||||||||||| ||||| Sbjct: 100866 tggttgtgaaacctgacatgttgtttgggaagcgtggcaagag 100908 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 59 atggcgcgcaagaagattcgggagtacgactccaag 94 ||||||||||||||||| | ||||| ||||||||| Sbjct: 100242 atggcgcgcaagaagatcagagagtatgactccaag 100277
>gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis thaliana BAC F20B24 from chromosome I, complete sequence Length = 99416 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 461 tgtggaggcattgaaatcgaggaaaactgggacaaggt 498 |||||||| ||||| |||||||| |||||||||||||| Sbjct: 36717 tgtggaggaattgagatcgaggagaactgggacaaggt 36754
>ref|NM_100814.2| Arabidopsis thaliana ACLA-3 AT1G09430 (ACLA-3) mRNA, complete cds Length = 1730 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 449 agcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagac 504 |||||||| |||||||| ||||||||||| || || || |||||||| || ||||| Sbjct: 422 agcttctctgaatgtggtggcattgaaatagaagagaattgggacaaagtgaagac 477
>gb|AY127019.1| Arabidopsis thaliana At1g09430/F19J9_9 mRNA, complete cds Length = 1599 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 449 agcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagac 504 |||||||| |||||||| ||||||||||| || || || |||||||| || ||||| Sbjct: 422 agcttctctgaatgtggtggcattgaaatagaagagaattgggacaaagtgaagac 477
>gb|BT003017.1| Arabidopsis thaliana At1g09430/F19J9_9 gene, complete cds Length = 1275 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 449 agcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagac 504 |||||||| |||||||| ||||||||||| || || || |||||||| || ||||| Sbjct: 391 agcttctctgaatgtggtggcattgaaatagaagagaattgggacaaagtgaagac 446
>emb|AJ344108.1|LAL344108 Lupinus albus mRNA for ATP citrate lyase b-subunit (aclb gene) Length = 1617 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 458 gaatgtggaggcattgaaatcgaggaaaactgggacaaggttaagac 504 ||||||||||| || ||||| || || |||||||| ||||||||||| Sbjct: 472 gaatgtggaggaatcgaaattgaagagaactgggataaggttaagac 518
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 449 agcttctcggaatgtggaggcattgaaatcgaggaaaactgggacaa 495 |||||||| |||||||| ||||||||||| || || || |||||||| Sbjct: 24460 agcttctctgaatgtggtggcattgaaatagaagagaattgggacaa 24506
>emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j21, COMPLETE SEQUENCE Length = 122251 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 222 tggttgtgaagcctgacatgctgttcgggaagcgtgggaagagtgg 267 |||||||||| ||||||||| | || ||||||||||| || ||||| Sbjct: 79972 tggttgtgaaacctgacatgttatttgggaagcgtggtaaaagtgg 79927
>ref|XM_868362.1| PREDICTED: Bos taurus similar to reticulon 4 receptor precursor (LOC616358), mRNA Length = 1679 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 111 acctcaagcgcctggccgccatcgacctg 139 ||||||||||| ||||||||| ||||||| Sbjct: 875 acctcaagcgcttggccgccaccgacctg 903
>gb|AY152828.1| Felis catus clone PAC f20 major histocompatiblity complex classical class II region, partial sequence Length = 87684 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tgggagttgaggttgagatgggcgt 348 |||||| |||||||||||||||||| Sbjct: 72703 tgggagctgaggttgagatgggcgt 72679
>gb|AY152829.1| Felis catus clone PAC f23 major histocompatiblity complex classical class II region, partial sequence Length = 69476 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 tgggagttgaggttgagatgggcgt 348 |||||| |||||||||||||||||| Sbjct: 18244 tgggagctgaggttgagatgggcgt 18220
>gb|AE008886.1| Salmonella typhimurium LT2, section 190 of 220 of the complete genome Length = 21018 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 agcacctcaagcgcctggccg 128 ||||||||||||||||||||| Sbjct: 3355 agcacctcaagcgcctggccg 3375
>emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 14/20 Length = 258050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 agcacctcaagcgcctggccg 128 ||||||||||||||||||||| Sbjct: 222140 agcacctcaagcgcctggccg 222120
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 agcacctcaagcgcctggccg 128 ||||||||||||||||||||| Sbjct: 3969591 agcacctcaagcgcctggccg 3969611
>gb|AF233324.1|STYSTMD1 Salmonella typhimurium fragment STMD1 Length = 96086 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 agcacctcaagcgcctggccg 128 ||||||||||||||||||||| Sbjct: 87322 agcacctcaagcgcctggccg 87342
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 agcacctcaagcgcctggccg 128 ||||||||||||||||||||| Sbjct: 3413798 agcacctcaagcgcctggccg 3413778
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 agcacctcaagcgcctggccg 128 ||||||||||||||||||||| Sbjct: 4125595 agcacctcaagcgcctggccg 4125615
>ref|XM_508981.1| PREDICTED: Pan troglodytes similar to complement component 1, r subcomponent-like precursor; complement C1r-like proteinase; C1r-like serine protease analog (LOC451809), mRNA Length = 2152 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 cctgatgcttgtgctccctt 555 |||||||||||||||||||| Sbjct: 798 cctgatgcttgtgctccctt 779
>gb|AC018653.29| Homo sapiens 12 BAC RP11-273B20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172155 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 cctgatgcttgtgctccctt 555 |||||||||||||||||||| Sbjct: 142545 cctgatgcttgtgctccctt 142526
>dbj|AK137444.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830001J01 product:Rho GTPase activating protein 25, full insert sequence Length = 2494 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 1924 aagtcaaggagtttgtgaag 1943
>dbj|AK159941.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420039H03 product:Rho GTPase activating protein 25, full insert sequence Length = 2636 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 2066 aagtcaaggagtttgtgaag 2085
>dbj|AK159598.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025G10 product:Rho GTPase activating protein 25, full insert sequence Length = 2621 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 2066 aagtcaaggagtttgtgaag 2085
>dbj|AK137526.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830129C22 product:Rho GTPase activating protein 25, full insert sequence Length = 3766 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 2336 aagtcaaggagtttgtgaag 2355
>dbj|AK048450.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130061J22 product:Rho GTPase activating protein 25, full insert sequence Length = 3027 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 1896 aagtcaaggagtttgtgaag 1915
>dbj|AK037710.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130039I20 product:hypothetical RhoGAP domain/Pleckstrin homology (PH) domain containing protein, full insert sequence Length = 2588 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 1998 aagtcaaggagtttgtgaag 2017
>ref|NM_175476.3| Mus musculus Rho GTPase activating protein 25 (Arhgap25), transcript variant 2, mRNA Length = 2499 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 1909 aagtcaaggagtttgtgaag 1928
>ref|NM_001037727.1| Mus musculus Rho GTPase activating protein 25 (Arhgap25), transcript variant 1, mRNA Length = 2831 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 2241 aagtcaaggagtttgtgaag 2260
>dbj|AK172878.1| Mus musculus mRNA for mKIAA0053 protein Length = 2170 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 1595 aagtcaaggagtttgtgaag 1614
>gb|AC155726.4| Mus musculus 6 BAC RP24-180C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 187560 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 93548 aagtcaaggagtttgtgaag 93529
>gb|BC108400.1| Mus musculus Rho GTPase activating protein 25, mRNA (cDNA clone IMAGE:30143208), partial cds Length = 2158 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtcaaggagtttgtgaag 316 |||||||||||||||||||| Sbjct: 1546 aagtcaaggagtttgtgaag 1565 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,561,978 Number of Sequences: 3902068 Number of extensions: 3561978 Number of successful extensions: 65174 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64962 Number of HSP's gapped (non-prelim): 210 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)