>ZN678_HUMAN (Q5SXM1) Zinc finger protein 678|
          Length = 525

 Score = 36.2 bits (82), Expect = 0.053
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 18/146 (12%)
 Frame = +3

Query: 93  FPCHGHLHSGSRYGQLPSQRRLHSR---LGCKQLPSLLGPHSRVRCEQLPRHRRLHSRVR 263
           +PC     + +++  L   +R+H+      CK+        S      L +H+R+H+  +
Sbjct: 209 YPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKECCKAFNKFSN-----LTQHKRIHTGEK 263

Query: 264 -------------CEQLPRHRRLHSLVRCGQLPXXXXXXXXXXXN--QLPRHSHLHI*VR 398
                        C  L RHRR+H+    G+ P               L RH  +H   +
Sbjct: 264 PYKCEECGNVFNECSHLTRHRRIHT----GEKPYKCEECGKAFTQFASLTRHKRIHTGEK 319

Query: 399 CEQLPSYRRLHSRVRCNQLPNHRRLH 476
             Q     +  +  RC+ L +H+R+H
Sbjct: 320 PYQCEECGKTFN--RCSHLSSHKRIH 343



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
 Frame = +3

Query: 216 RCEQLPRHRRLHS---RVRCEQ----------LPRHRRLHSLVRCGQLPX--XXXXXXXX 350
           RC  L  H+R+H+     +CE+          L +H+R+H+    G+ P           
Sbjct: 332 RCSHLSSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKRIHT----GEKPYKCKECGKAFN 387

Query: 351 XXNQLPRHSHLHI*V---RCEQLPSYRRLHSRVRCNQLPNHRRLH 476
             + L +H  +H  V   +CE+     +     +C+ L +H+R+H
Sbjct: 388 KFSSLTQHRRIHTGVKPYKCEECGKVFK-----QCSHLTSHKRIH 427

>ZN540_PONPY (Q5R5S6) Zinc finger protein 540|
          Length = 660

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
 Frame = +3

Query: 219 CEQLPRHRRLHSRVR---CEQ----------LPRHRRLHSLVRCGQLPX--XXXXXXXXX 353
           C QL RH+++H+ V+   C++          L  HRR H+    G+ P            
Sbjct: 339 CGQLTRHQKIHTGVKPYECKECGKTFRLSFYLTEHRRTHA----GKKPYECKECGKSFNV 394

Query: 354 XNQLPRHSHLHI*VR------CEQLPSYR---RLHSRVRCNQLP 458
             QL RH  +H  ++      CE+  SY    R+HSR+   + P
Sbjct: 395 RGQLNRHKAIHTGIKPFACKVCEKAFSYSGDLRVHSRIHTGEKP 438

>ZN540_HUMAN (Q8NDQ6) Zinc finger protein 540|
          Length = 660

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
 Frame = +3

Query: 219 CEQLPRHRRLHSRVR---CEQ----------LPRHRRLHSLVRCGQLPX--XXXXXXXXX 353
           C QL RH+++H+ V+   C++          L  HRR H+    G+ P            
Sbjct: 339 CGQLTRHQKIHTGVKPYECKECGKTFRLSFYLTEHRRTHA----GKKPYECKECGKSFNV 394

Query: 354 XNQLPRHSHLHI*VR------CEQLPSYR---RLHSRVRCNQLP 458
             QL RH  +H  ++      CE+  SY    R+HSR+   + P
Sbjct: 395 RGQLNRHKTIHTGIKPFACKVCEKAFSYSGDLRVHSRIHTGEKP 438

>ZN588_HUMAN (Q9UII5) Zinc finger protein 588 (Zinc finger protein ZFD25)|
          Length = 783

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 15/113 (13%)
 Frame = +3

Query: 93  FPCHGHLHSGSRYGQLPSQRRLHSRLGCKQLPSLLGPHSRVRCEQLPRHRRLHSRV---R 263
           F C+ ++    ++      +R H+  G K         S     QL +HRR+H+RV   +
Sbjct: 76  FQCNKYVKVFDKFSNSNRYKRRHT--GNKHFKCKECSKSFCVLSQLTQHRRIHTRVNSYK 133

Query: 264 CEQ----------LPRHRRLHSLVRCGQLPX--XXXXXXXXXXNQLPRHSHLH 386
           CE+          L +H+R+H+    G+ P             +QL RH  +H
Sbjct: 134 CEECGKAFNWFSTLTKHKRIHT----GEKPYKCEECGKAFNQSSQLTRHKIIH 182

>MDHP_MEDSA (O48902) Malate dehydrogenase [NADP], chloroplast precursor (EC|
           1.1.1.82) (NADP-MDH)
          Length = 437

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/51 (27%), Positives = 19/51 (37%)
 Frame = +3

Query: 309 CGQLPXXXXXXXXXXXNQLPRHSHLHI*VRCEQLPSYRRLHSRVRCNQLPN 461
           C +               LPRH H      C   P +R  H+R+ C+  PN
Sbjct: 10  CSKTQLHSSSQLSFLSRTLPRHHH------CTLAPLHRTQHARISCSVAPN 54


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.127    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,624,032
Number of Sequences: 219361
Number of extensions: 685057
Number of successful extensions: 2414
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2385
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)