No.
Definition
Score (bits)
E Value
1 ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative...
226
6e-56
2 dbj|AK064354.1| Oryza sativa (japonica cultivar-group) cDNA clon...
226
6e-56
3 ref|NM_197135.1| Oryza sativa (japonica cultivar-group) putative...
125
2e-25
4 dbj|AK120578.1| Oryza sativa (japonica cultivar-group) cDNA clon...
125
2e-25
5 dbj|AK120231.1| Oryza sativa (japonica cultivar-group) cDNA clon...
125
2e-25
6 gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno...
111
2e-21
7 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
111
2e-21
8 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
111
2e-21
9 gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete se...
46
0.11
10 gb|AC124425.3| Mus musculus BAC clone RP24-230N16 from chromosom...
44
0.44
11 gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete se...
42
1.8
12 gb|AC115904.13| Mus musculus chromosome 16, clone RP24-472P22, c...
42
1.8
13 ref|XM_541752.2| PREDICTED: Canis familiaris similar to Glutamat...
42
1.8
14 ref|XM_853340.1| PREDICTED: Canis familiaris similar to Glutamat...
42
1.8
15 gb|AC123851.4| Mus musculus BAC clone RP23-323K4 from chromosome...
42
1.8
16 gb|AC124336.10| Mus musculus chromosome 18, clone RP24-125A2, co...
42
1.8
17 gb|AC102069.13| Mus musculus chromosome 18, clone RP23-304K8, co...
42
1.8
18 gb|AC117589.13| Mus musculus chromosome 18, clone RP23-222A8, co...
42
1.8
19 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
42
1.8
20 emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 ...
42
1.8
21 emb|BX649476.3| Zebrafish DNA sequence from clone DKEY-13I19 in ...
42
1.8
22 gb|AC150512.3| Bos taurus BAC CH240-319N17 (Children's Hospital...
40
6.9
23 gb|AC008337.8| Drosophila melanogaster clone BACR02B03, complete...
40
6.9
24 gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complet...
40
6.9
25 gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome...
40
6.9
26 gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosom...
40
6.9
27 gb|AC164411.4| Mus musculus chromosome 1, clone RP23-60E6, compl...
40
6.9
28 gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosom...
40
6.9
29 gb|AC156032.4| Mus musculus BAC clone RP24-370C21 from chromosom...
40
6.9
30 gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, compl...
40
6.9
31 dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...
40
6.9
32 ref|NM_133150.2| Drosophila melanogaster CG8062-RA (CG8062), mRNA
40
6.9
33 gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosom...
40
6.9
34 gb|AC010596.8| Homo sapiens chromosome 5 clone CTC-483B24, compl...
40
6.9
35 gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosom...
40
6.9
36 gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Canc...
40
6.9
37 gb|AC115775.12| Mus musculus chromosome 8, clone RP23-125P1, com...
40
6.9
38 emb|Z68506.1|PSIEP110 P.sativum mRNA for 110 kD chloroplast inne...
40
6.9
39 gb|AC133086.4| Mus musculus BAC clone RP24-110I11 from 6, comple...
40
6.9
40 gb|AF184230.1|AF184230 Drosophila melanogaster clone LD28120 BcD...
40
6.9
41 gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 ...
40
6.9
42 gb|AC102666.13| Mus musculus chromosome 1, clone RP23-444A8, com...
40
6.9
43 gb|U56419.1|PSU56419 Pisum sativum import intermediate associate...
40
6.9
44 gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, comple...
40
6.9
45 emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d...
40
6.9
46 dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone...
40
6.9
47 gb|AC158297.3| Mus musculus chromosome 7, clone RP24-336M17, com...
40
6.9
48 gb|M96929.1|SYOCO2CMP Synechococcus sp. carbon dioxide concentra...
40
6.9
49 gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
40
6.9
>gb|AC023240.9 | Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
sequence
Length = 131984
Score = 111 bits (56), Expect = 2e-21
Identities = 101/116 (87%)
Strand = Plus / Plus
Query: 103 ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
|||| ||| ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 51715 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 51774
Query: 163 aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
| | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 51775 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 51830
Score = 89.7 bits (45), Expect = 8e-15
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 414 aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
||||||||||||||||||||| || ||||| ||||||| |||||||||||| |||||||
Sbjct: 53165 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 53224
Query: 474 tgatgaggt 482
|||||||||
Sbjct: 53225 tgatgaggt 53233
Score = 73.8 bits (37), Expect = 5e-10
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 414 aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
|||||||||||||||||| | |||||||| |||||| |||||| |||||||||||||
Sbjct: 38434 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 38493
Query: 474 tgatgaggt 482
|||||||||
Sbjct: 38494 tgatgaggt 38502
Score = 71.9 bits (36), Expect = 2e-09
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 346 cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 405
||||||||||||||||||||||| |||||||||| ||||||| | | | |||||||||
Sbjct: 52892 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 52951
Query: 406 attggaagaggt 417
||||| ||||||
Sbjct: 52952 attgggagaggt 52963
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 47 atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 106
||||||||| |||||||| || ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 50562 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 50621
Score = 56.0 bits (28), Expect = 1e-04
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 103 ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
|||| ||||||| |||| || ||| ||||||| ||||||| || |||||||||| ||||
Sbjct: 35946 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 36005
Query: 163 aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
| |||||| |||||| ||||| || ||||| | ||||| | ||||||||||||
Sbjct: 36006 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 36061
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 482 ttgctgctgacatgttcaaggagcatgcgaaga 514
|||||||||| ||||||||||||||||| ||||
Sbjct: 53474 ttgctgctgagatgttcaaggagcatgcaaaga 53506
Score = 44.1 bits (22), Expect = 0.44
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 277 aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 336
||||||||||| || ||||||||| ||| | ||||||||||||| |||||| ||| ||
Sbjct: 52140 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 52199
Query: 337 ac 338
||
Sbjct: 52200 ac 52201
Score = 44.1 bits (22), Expect = 0.44
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 308 tacttccatggaaacatcttttcggg 333
||||||||||||||| ||||||||||
Sbjct: 36392 tacttccatggaaacgtcttttcggg 36417
Score = 42.1 bits (21), Expect = 1.8
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 2 ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaa 46
||||||| ||||||| ||| ||||||| |||||||||||||||
Sbjct: 35398 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaa 35442
>dbj|AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 111 bits (56), Expect = 2e-21
Identities = 101/116 (87%)
Strand = Plus / Minus
Query: 103 ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
|||| ||| ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 18161413 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 18161354
Query: 163 aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
| | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 18161353 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 18161298
Score = 89.7 bits (45), Expect = 8e-15
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 414 aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
||||||||||||||||||||| || ||||| ||||||| |||||||||||| |||||||
Sbjct: 18159963 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 18159904
Query: 474 tgatgaggt 482
|||||||||
Sbjct: 18159903 tgatgaggt 18159895
Score = 73.8 bits (37), Expect = 5e-10
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 414 aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
|||||||||||||||||| | |||||||| |||||| |||||| |||||||||||||
Sbjct: 18174694 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 18174635
Query: 474 tgatgaggt 482
|||||||||
Sbjct: 18174634 tgatgaggt 18174626
Score = 71.9 bits (36), Expect = 2e-09
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 346 cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 405
||||||||||||||||||||||| |||||||||| ||||||| | | | |||||||||
Sbjct: 18160236 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 18160177
Query: 406 attggaagaggt 417
||||| ||||||
Sbjct: 18160176 attgggagaggt 18160165
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 47 atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 106
||||||||| |||||||| || ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 18162566 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 18162507
Score = 56.0 bits (28), Expect = 1e-04
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 103 ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
|||| ||||||| |||| || ||| ||||||| ||||||| || |||||||||| ||||
Sbjct: 18177182 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 18177123
Query: 163 aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
| |||||| |||||| ||||| || ||||| | ||||| | ||||||||||||
Sbjct: 18177122 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 18177067
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 482 ttgctgctgacatgttcaaggagcatgcgaaga 514
|||||||||| ||||||||||||||||| ||||
Sbjct: 18159654 ttgctgctgagatgttcaaggagcatgcaaaga 18159622
Score = 44.1 bits (22), Expect = 0.44
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 308 tacttccatggaaacatcttttcggg 333
||||||||||||||| ||||||||||
Sbjct: 18176736 tacttccatggaaacgtcttttcggg 18176711
Score = 44.1 bits (22), Expect = 0.44
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 277 aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 336
||||||||||| || ||||||||| ||| | ||||||||||||| |||||| ||| ||
Sbjct: 18160988 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 18160929
Query: 337 ac 338
||
Sbjct: 18160928 ac 18160927
Score = 42.1 bits (21), Expect = 1.8
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 2 ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaa 46
||||||| ||||||| ||| ||||||| |||||||||||||||
Sbjct: 18177730 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaa 18177686
>gb|AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 111 bits (56), Expect = 2e-21
Identities = 101/116 (87%)
Strand = Plus / Minus
Query: 103 ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
|||| ||| ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 18170666 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 18170607
Query: 163 aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
| | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 18170606 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 18170551
Score = 89.7 bits (45), Expect = 8e-15
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 414 aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
||||||||||||||||||||| || ||||| ||||||| |||||||||||| |||||||
Sbjct: 18169216 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 18169157
Query: 474 tgatgaggt 482
|||||||||
Sbjct: 18169156 tgatgaggt 18169148
Score = 73.8 bits (37), Expect = 5e-10
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 414 aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
|||||||||||||||||| | |||||||| |||||| |||||| |||||||||||||
Sbjct: 18183947 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 18183888
Query: 474 tgatgaggt 482
|||||||||
Sbjct: 18183887 tgatgaggt 18183879
Score = 71.9 bits (36), Expect = 2e-09
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 346 cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 405
||||||||||||||||||||||| |||||||||| ||||||| | | | |||||||||
Sbjct: 18169489 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 18169430
Query: 406 attggaagaggt 417
||||| ||||||
Sbjct: 18169429 attgggagaggt 18169418
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 47 atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 106
||||||||| |||||||| || ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 18171819 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 18171760
Score = 56.0 bits (28), Expect = 1e-04
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 103 ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
|||| ||||||| |||| || ||| ||||||| ||||||| || |||||||||| ||||
Sbjct: 18186435 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 18186376
Query: 163 aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
| |||||| |||||| ||||| || ||||| | ||||| | ||||||||||||
Sbjct: 18186375 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 18186320
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 482 ttgctgctgacatgttcaaggagcatgcgaaga 514
|||||||||| ||||||||||||||||| ||||
Sbjct: 18168907 ttgctgctgagatgttcaaggagcatgcaaaga 18168875
Score = 44.1 bits (22), Expect = 0.44
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 308 tacttccatggaaacatcttttcggg 333
||||||||||||||| ||||||||||
Sbjct: 18185989 tacttccatggaaacgtcttttcggg 18185964
Score = 44.1 bits (22), Expect = 0.44
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 277 aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 336
||||||||||| || ||||||||| ||| | ||||||||||||| |||||| ||| ||
Sbjct: 18170241 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 18170182
Query: 337 ac 338
||
Sbjct: 18170181 ac 18170180
Score = 42.1 bits (21), Expect = 1.8
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 2 ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaa 46
||||||| ||||||| ||| ||||||| |||||||||||||||
Sbjct: 18186983 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaa 18186939
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 42.1 bits (21), Expect = 1.8
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 167 tattaaaaagttcaaaaaagc 187
|||||||||||||||||||||
Sbjct: 16973784 tattaaaaagttcaaaaaagc 16973764
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16811535 attaaaaagttcaaaaaagc 16811554
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16804474 attaaaaagttcaaaaaagc 16804493
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16803835 attaaaaagttcaaaaaagc 16803854
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16803360 attaaaaagttcaaaaaagc 16803379
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16801450 attaaaaagttcaaaaaagc 16801469
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16799220 attaaaaagttcaaaaaagc 16799239
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16792191 attaaaaagttcaaaaaagc 16792210
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16770369 attaaaaagttcaaaaaagc 16770350
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16767819 attaaaaagttcaaaaaagc 16767800
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 168 attaaaaagttcaaaaaagc 187
||||||||||||||||||||
Sbjct: 16755485 attaaaaagttcaaaaaagc 16755466
>gb|CP000100.1 | Synechococcus elongatus PCC 7942, complete genome
Length = 2695903
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 476 atgaggttgctgctgacatg 495
||||||||||||||||||||
Sbjct: 1475812 atgaggttgctgctgacatg 1475831
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,104,719
Number of Sequences: 3902068
Number of extensions: 5104719
Number of successful extensions: 118804
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117909
Number of HSP's gapped (non-prelim): 895
length of query: 514
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 491
effective length of database: 17,143,297,704
effective search space: 8417359172664
effective search space used: 8417359172664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)