ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basde12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative... 226 6e-56
2dbj|AK064354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 6e-56
3ref|NM_197135.1| Oryza sativa (japonica cultivar-group) putative... 125 2e-25
4dbj|AK120578.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
5dbj|AK120231.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
6gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno... 111 2e-21
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
9gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete se... 46 0.11
10gb|AC124425.3| Mus musculus BAC clone RP24-230N16 from chromosom... 44 0.44
11gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete se... 42 1.8
12gb|AC115904.13| Mus musculus chromosome 16, clone RP24-472P22, c... 42 1.8
13ref|XM_541752.2| PREDICTED: Canis familiaris similar to Glutamat... 42 1.8
14ref|XM_853340.1| PREDICTED: Canis familiaris similar to Glutamat... 42 1.8
15gb|AC123851.4| Mus musculus BAC clone RP23-323K4 from chromosome... 42 1.8
16gb|AC124336.10| Mus musculus chromosome 18, clone RP24-125A2, co... 42 1.8
17gb|AC102069.13| Mus musculus chromosome 18, clone RP23-304K8, co... 42 1.8
18gb|AC117589.13| Mus musculus chromosome 18, clone RP23-222A8, co... 42 1.8
19dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
20emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 ... 42 1.8
21emb|BX649476.3| Zebrafish DNA sequence from clone DKEY-13I19 in ... 42 1.8
22gb|AC150512.3| Bos taurus BAC CH240-319N17 (Children's Hospital... 40 6.9
23gb|AC008337.8| Drosophila melanogaster clone BACR02B03, complete... 40 6.9
24gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complet... 40 6.9
25gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome... 40 6.9
26gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosom... 40 6.9
27gb|AC164411.4| Mus musculus chromosome 1, clone RP23-60E6, compl... 40 6.9
28gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosom... 40 6.9
29gb|AC156032.4| Mus musculus BAC clone RP24-370C21 from chromosom... 40 6.9
30gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, compl... 40 6.9
31dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 6.9
32ref|NM_133150.2| Drosophila melanogaster CG8062-RA (CG8062), mRNA 40 6.9
33gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosom... 40 6.9
34gb|AC010596.8| Homo sapiens chromosome 5 clone CTC-483B24, compl... 40 6.9
35gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosom... 40 6.9
36gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Canc... 40 6.9
37gb|AC115775.12| Mus musculus chromosome 8, clone RP23-125P1, com... 40 6.9
38emb|Z68506.1|PSIEP110 P.sativum mRNA for 110 kD chloroplast inne... 40 6.9
39gb|AC133086.4| Mus musculus BAC clone RP24-110I11 from 6, comple... 40 6.9
40gb|AF184230.1|AF184230 Drosophila melanogaster clone LD28120 BcD... 40 6.9
41gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 ... 40 6.9
42gb|AC102666.13| Mus musculus chromosome 1, clone RP23-444A8, com... 40 6.9
43gb|U56419.1|PSU56419 Pisum sativum import intermediate associate... 40 6.9
44gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, comple... 40 6.9
45emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d... 40 6.9
46dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.9
47gb|AC158297.3| Mus musculus chromosome 7, clone RP24-336M17, com... 40 6.9
48gb|M96929.1|SYOCO2CMP Synechococcus sp. carbon dioxide concentra... 40 6.9
49gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 6.9 
>ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner
           envelope protein (OSJNBa0051D19.7), mRNA
          Length = 2967

 Score =  226 bits (114), Expect = 6e-56
 Identities = 207/238 (86%)
 Strand = Plus / Plus

                                                                       
Query: 277 aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 336
           ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 736 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 795

                                                                       
Query: 337 acggactatcagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagag 396
           || || | |||||||||||||||||||||||| ||||||||||   ||||||| | | | 
Sbjct: 796 actgattctcagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaa 855

                                                                       
Query: 397 ctcaagtctattggaagaggtcttgacataggcacgctcattgaagtgaggagagtacaa 456
           |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||||
Sbjct: 856 ctcaagtctattgggagaggtcttgacataggcacgcttatcgaagtaaggagagcacaa 915

                                                                     
Query: 457 cttgcatataaactttttgatgaggttgctgctgacatgttcaaggagcatgcgaaga 514
           |||||||| ||||||| ||||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 916 cttgcatacaaactttctgatgagattgctgctgagatgttcaaggagcatgcaaaga 973



 Score =  188 bits (95), Expect = 1e-44
 Identities = 170/195 (87%)
 Strand = Plus / Plus

                                                                       
Query: 24  gaggtggcggccatcgcgagcaaatatggagtcagtacacaagatgcagcattcaaatca 83
           ||||||| |||| |||||| |||||||||||| |||||||| || ||||| |||||| ||
Sbjct: 502 gaggtggaggccctcgcgaccaaatatggagttagtacacaggacgcagccttcaaagca 561

                                                                       
Query: 84  gagctctgtgacctgtatgccagctttgtttactcagtacttcctccaggacatgaagat 143
           |||||||||||  |||||||||| ||| ||||||||||||||||||||||| ||||||||
Sbjct: 562 gagctctgtgatttgtatgccaggtttctttactcagtacttcctccaggagatgaagat 621

                                                                       
Query: 144 ctcaaaggtactgaggttgaagctattaaaaagttcaaaaaagctcttggactcgatgat 203
           |||||||||  ||||||| |  | |||| ||| || ||||| |||||||| |||||||||
Sbjct: 622 ctcaaaggtgatgaggttcagaccattataaaatttaaaaatgctcttgggctcgatgat 681

                          
Query: 204 gtggatgctgcaaat 218
           || ||||||||||||
Sbjct: 682 gtagatgctgcaaat 696
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>dbj|AK064354.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-A12, full
           insert sequence
          Length = 1967

 Score =  226 bits (114), Expect = 6e-56
 Identities = 207/238 (86%)
 Strand = Plus / Plus

                                                                       
Query: 277 aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 336
           ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 134 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 193

                                                                       
Query: 337 acggactatcagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagag 396
           || || | |||||||||||||||||||||||| ||||||||||   ||||||| | | | 
Sbjct: 194 actgattctcagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaa 253

                                                                       
Query: 397 ctcaagtctattggaagaggtcttgacataggcacgctcattgaagtgaggagagtacaa 456
           |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||||
Sbjct: 254 ctcaagtctattgggagaggtcttgacataggcacgcttatcgaagtaaggagagcacaa 313

                                                                     
Query: 457 cttgcatataaactttttgatgaggttgctgctgacatgttcaaggagcatgcgaaga 514
           |||||||| ||||||| ||||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 314 cttgcatacaaactttctgatgagattgctgctgagatgttcaaggagcatgcaaaga 371



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 195 ctcgatgatgtggatgctgcaaat 218
           ||||||||||| ||||||||||||
Sbjct: 2   ctcgatgatgtagatgctgcaaat 25
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>ref|NM_197135.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner
           envelope protein (OSJNBa0051D19.5), mRNA
          Length = 1692

 Score =  125 bits (63), Expect = 2e-25
 Identities = 171/207 (82%)
 Strand = Plus / Plus

                                                                       
Query: 308 tacttccatggaaacatcttttcgggatcacggactatcagattgatattgctatgcggg 367
           ||||||||||||||| |||||||||| |    || | |||||| ||   || |||| |||
Sbjct: 755 tacttccatggaaacgtcttttcggggttcatgaatctcagatagacgatgttatgaggg 814

                                                                       
Query: 368 agaatgccaaaagtctatatgcgttagagctcaagtctattggaagaggtcttgacatag 427
           | | |||||| ||| ||||||| | |  ||||||||||||||| ||||||||||||||||
Sbjct: 815 aaagtgccaagagtttatatgcatcattgctcaagtctattgggagaggtcttgacatag 874

                                                                       
Query: 428 gcacgctcattgaagtgaggagagtacaacttgcatataaactttttgatgaggttgctg 487
           ||||  | |||||||| ||||||  |||||| ||||||||||||| ||||||| ||||| 
Sbjct: 875 gcacattaattgaagtaaggagatcacaactagcatataaactttctgatgagattgctt 934

                                      
Query: 488 ctgacatgttcaaggagcatgcgaaga 514
           |||| ||||||| ||||||||| ||||
Sbjct: 935 ctgagatgttcagggagcatgcaaaga 961



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 175/217 (80%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaaatatggagtcagtac 61
           |||||||  |||||||  ||| ||||||| |||||||||||||||||| || || || ||
Sbjct: 423 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaaatacggcgttagcac 482

                                                                       
Query: 62  acaagatgcagcattcaaatcagagctctgtgacctgtatgccagctttgtttactcagt 121
           | | |||||| | |||||  | |||||||||||  |||||| ||| ||||||| |||| |
Sbjct: 483 agaggatgcaaccttcaaggccgagctctgtgatttgtatggcaggtttgttttctcatt 542

                                                                       
Query: 122 acttcctccaggacatgaagatctcaaaggtactgaggttgaagctattaaaaagttcaa 181
           | ||| ||||||| ||||||| ||  |||||||||| |||||  |||||| |||||| ||
Sbjct: 543 aattcatccaggatatgaagaccttgaaggtactgaagttgagactattataaagtttaa 602

                                                
Query: 182 aaaagctcttggactcgatgatgtggatgctgcaaat 218
           ||| || |||||  |  ||||| | ||||||||||||
Sbjct: 603 aaaggcccttgggttgaatgatatagatgctgcaaat 639
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>dbj|AK120578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E03, full
           insert sequence
          Length = 1669

 Score =  125 bits (63), Expect = 2e-25
 Identities = 171/207 (82%)
 Strand = Plus / Plus

                                                                       
Query: 308 tacttccatggaaacatcttttcgggatcacggactatcagattgatattgctatgcggg 367
           ||||||||||||||| |||||||||| |    || | |||||| ||   || |||| |||
Sbjct: 754 tacttccatggaaacgtcttttcggggttcatgaatctcagatagacgatgttatgaggg 813

                                                                       
Query: 368 agaatgccaaaagtctatatgcgttagagctcaagtctattggaagaggtcttgacatag 427
           | | |||||| ||| ||||||| | |  ||||||||||||||| ||||||||||||||||
Sbjct: 814 aaagtgccaagagtttatatgcatcattgctcaagtctattgggagaggtcttgacatag 873

                                                                       
Query: 428 gcacgctcattgaagtgaggagagtacaacttgcatataaactttttgatgaggttgctg 487
           ||||  | |||||||| ||||||  |||||| ||||||||||||| ||||||| ||||| 
Sbjct: 874 gcacattaattgaagtaaggagatcacaactagcatataaactttctgatgagattgctt 933

                                      
Query: 488 ctgacatgttcaaggagcatgcgaaga 514
           |||| ||||||| ||||||||| ||||
Sbjct: 934 ctgagatgttcagggagcatgcaaaga 960



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 174/217 (80%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaaatatggagtcagtac 61
           |||||||  |||||||  ||| ||||||| |||||||||||||||||| || || || ||
Sbjct: 422 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaaatacggcgttagcac 481

                                                                       
Query: 62  acaagatgcagcattcaaatcagagctctgtgacctgtatgccagctttgtttactcagt 121
           | | |||||| | |||||  | |||||||||||  ||| || ||| ||||||| |||| |
Sbjct: 482 agaggatgcaaccttcaaggccgagctctgtgatttgtttggcaggtttgttttctcatt 541

                                                                       
Query: 122 acttcctccaggacatgaagatctcaaaggtactgaggttgaagctattaaaaagttcaa 181
           | ||| ||||||| ||||||| ||  |||||||||| |||||  |||||| |||||| ||
Sbjct: 542 aattcatccaggatatgaagaccttgaaggtactgaagttgagactattataaagtttaa 601

                                                
Query: 182 aaaagctcttggactcgatgatgtggatgctgcaaat 218
           ||| || |||||  |  ||||| | ||||||||||||
Sbjct: 602 aaaggcccttgggttgaatgatatagatgctgcaaat 638
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>dbj|AK120231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E07, full
           insert sequence
          Length = 2003

 Score =  125 bits (63), Expect = 2e-25
 Identities = 171/207 (82%)
 Strand = Plus / Plus

                                                                       
Query: 308 tacttccatggaaacatcttttcgggatcacggactatcagattgatattgctatgcggg 367
           ||||||||||||||| |||||||||| |    || | |||||| ||   || |||| |||
Sbjct: 616 tacttccatggaaacgtcttttcggggttcatgaatctcagatagacgatgttatgaggg 675

                                                                       
Query: 368 agaatgccaaaagtctatatgcgttagagctcaagtctattggaagaggtcttgacatag 427
           | | |||||| ||| ||||||| | |  ||||||||||||||| ||||||||||||||||
Sbjct: 676 aaagtgccaagagtttatatgcatcattgctcaagtctattgggagaggtcttgacatag 735

                                                                       
Query: 428 gcacgctcattgaagtgaggagagtacaacttgcatataaactttttgatgaggttgctg 487
           ||||  | |||||||| ||||||  |||||| ||||||||||||| ||||||| ||||| 
Sbjct: 736 gcacattaattgaagtaaggagatcacaactagcatataaactttctgatgagattgctt 795

                                      
Query: 488 ctgacatgttcaaggagcatgcgaaga 514
           |||| ||||||| ||||||||| ||||
Sbjct: 796 ctgagatgttcagggagcatgcaaaga 822



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 175/218 (80%), Gaps = 1/218 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaaatatggagtcagtac 61
           |||||||  |||||||  ||| ||||||| |||||||||||||||||| || || || ||
Sbjct: 283 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaaatacggcgttagcac 342

                                                                       
Query: 62  acaagatgcagcattcaaat-cagagctctgtgacctgtatgccagctttgtttactcag 120
           | | |||||| | |||||   | |||||||||||  |||||| ||| ||||||| |||| 
Sbjct: 343 agaggatgcaaccttcaagggccgagctctgtgatttgtatggcaggtttgttttctcat 402

                                                                       
Query: 121 tacttcctccaggacatgaagatctcaaaggtactgaggttgaagctattaaaaagttca 180
           || ||| ||||||| ||||||| ||  |||||||||| |||||  |||||| |||||| |
Sbjct: 403 taattcatccaggatatgaagaccttgaaggtactgaagttgagactattataaagttta 462

                                                 
Query: 181 aaaaagctcttggactcgatgatgtggatgctgcaaat 218
           |||| || |||||  |  ||||| | ||||||||||||
Sbjct: 463 aaaaggcccttgggttgaatgatatagatgctgcaaat 500
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>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                         
Query: 103   ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
             |||| ||| ||||||||||||||||||||||| |||||||||||||||||  ||||||| 
Sbjct: 51715 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 51774

                                                                     
Query: 163   aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
             |  | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 51775 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 51830



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 414   aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
             ||||||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||| 
Sbjct: 53165 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 53224

                      
Query: 474   tgatgaggt 482
             |||||||||
Sbjct: 53225 tgatgaggt 53233



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 414   aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
             ||||||||||||||||||  | |||||||| ||||||  |||||| ||||||||||||| 
Sbjct: 38434 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 38493

                      
Query: 474   tgatgaggt 482
             |||||||||
Sbjct: 38494 tgatgaggt 38502



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                         
Query: 346   cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 405
             ||||||||||||||||||||||| ||||||||||   ||||||| | | | |||||||||
Sbjct: 52892 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 52951

                         
Query: 406   attggaagaggt 417
             ||||| ||||||
Sbjct: 52952 attgggagaggt 52963



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 47    atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 106
             ||||||||| |||||||| || ||||| |||||| |||||||||||||  ||||||||||
Sbjct: 50562 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 50621



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 103   ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
             |||| ||||||| |||| || ||| ||||||| ||||||| ||  |||||||||| ||||
Sbjct: 35946 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 36005

                                                                     
Query: 163   aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
             |  |||||| |||||| ||||| || |||||  |  ||||| | ||||||||||||
Sbjct: 36006 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 36061



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 482   ttgctgctgacatgttcaaggagcatgcgaaga 514
             |||||||||| ||||||||||||||||| ||||
Sbjct: 53474 ttgctgctgagatgttcaaggagcatgcaaaga 53506



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 277   aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 336
             ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 52140 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 52199

               
Query: 337   ac 338
             ||
Sbjct: 52200 ac 52201



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 308   tacttccatggaaacatcttttcggg 333
             ||||||||||||||| ||||||||||
Sbjct: 36392 tacttccatggaaacgtcttttcggg 36417



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 2     ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaa 46
             |||||||  |||||||  ||| ||||||| |||||||||||||||
Sbjct: 35398 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaa 35442
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                            
Query: 103      ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
                |||| ||| ||||||||||||||||||||||| |||||||||||||||||  ||||||| 
Sbjct: 18161413 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 18161354

                                                                        
Query: 163      aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
                |  | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 18161353 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 18161298



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 414      aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
                ||||||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||| 
Sbjct: 18159963 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 18159904

                         
Query: 474      tgatgaggt 482
                |||||||||
Sbjct: 18159903 tgatgaggt 18159895



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                            
Query: 414      aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
                ||||||||||||||||||  | |||||||| ||||||  |||||| ||||||||||||| 
Sbjct: 18174694 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 18174635

                         
Query: 474      tgatgaggt 482
                |||||||||
Sbjct: 18174634 tgatgaggt 18174626



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 346      cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 405
                ||||||||||||||||||||||| ||||||||||   ||||||| | | | |||||||||
Sbjct: 18160236 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 18160177

                            
Query: 406      attggaagaggt 417
                ||||| ||||||
Sbjct: 18160176 attgggagaggt 18160165



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                            
Query: 47       atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 106
                ||||||||| |||||||| || ||||| |||||| |||||||||||||  ||||||||||
Sbjct: 18162566 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 18162507



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 103      ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
                |||| ||||||| |||| || ||| ||||||| ||||||| ||  |||||||||| ||||
Sbjct: 18177182 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 18177123

                                                                        
Query: 163      aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
                |  |||||| |||||| ||||| || |||||  |  ||||| | ||||||||||||
Sbjct: 18177122 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 18177067



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 482      ttgctgctgacatgttcaaggagcatgcgaaga 514
                |||||||||| ||||||||||||||||| ||||
Sbjct: 18159654 ttgctgctgagatgttcaaggagcatgcaaaga 18159622



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 308      tacttccatggaaacatcttttcggg 333
                ||||||||||||||| ||||||||||
Sbjct: 18176736 tacttccatggaaacgtcttttcggg 18176711



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 277      aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 336
                ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 18160988 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 18160929

                  
Query: 337      ac 338
                ||
Sbjct: 18160928 ac 18160927



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 2        ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaa 46
                |||||||  |||||||  ||| ||||||| |||||||||||||||
Sbjct: 18177730 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaa 18177686
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                            
Query: 103      ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
                |||| ||| ||||||||||||||||||||||| |||||||||||||||||  ||||||| 
Sbjct: 18170666 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 18170607

                                                                        
Query: 163      aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
                |  | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 18170606 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 18170551



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 414      aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
                ||||||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||| 
Sbjct: 18169216 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 18169157

                         
Query: 474      tgatgaggt 482
                |||||||||
Sbjct: 18169156 tgatgaggt 18169148



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                            
Query: 414      aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 473
                ||||||||||||||||||  | |||||||| ||||||  |||||| ||||||||||||| 
Sbjct: 18183947 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 18183888

                         
Query: 474      tgatgaggt 482
                |||||||||
Sbjct: 18183887 tgatgaggt 18183879



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 346      cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 405
                ||||||||||||||||||||||| ||||||||||   ||||||| | | | |||||||||
Sbjct: 18169489 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 18169430

                            
Query: 406      attggaagaggt 417
                ||||| ||||||
Sbjct: 18169429 attgggagaggt 18169418



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                            
Query: 47       atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 106
                ||||||||| |||||||| || ||||| |||||| |||||||||||||  ||||||||||
Sbjct: 18171819 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 18171760



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 103      ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 162
                |||| ||||||| |||| || ||| ||||||| ||||||| ||  |||||||||| ||||
Sbjct: 18186435 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 18186376

                                                                        
Query: 163      aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 218
                |  |||||| |||||| ||||| || |||||  |  ||||| | ||||||||||||
Sbjct: 18186375 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 18186320



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 482      ttgctgctgacatgttcaaggagcatgcgaaga 514
                |||||||||| ||||||||||||||||| ||||
Sbjct: 18168907 ttgctgctgagatgttcaaggagcatgcaaaga 18168875



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 308      tacttccatggaaacatcttttcggg 333
                ||||||||||||||| ||||||||||
Sbjct: 18185989 tacttccatggaaacgtcttttcggg 18185964



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 277      aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 336
                ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 18170241 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 18170182

                  
Query: 337      ac 338
                ||
Sbjct: 18170181 ac 18170180



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 2        ccccaccgcgctggaggccagtgaggtggcggccatcgcgagcaa 46
                |||||||  |||||||  ||| ||||||| |||||||||||||||
Sbjct: 18186983 ccccaccaagctggagagcagcgaggtggaggccatcgcgagcaa 18186939
to top
>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence
          Length = 83007

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 250   gcattccaaaagttaatttttgtgtcgaatcttgtcttcggagatgcatca 300
             |||||||||||||| |||| |||||| ||| |||| || || |||||||||
Sbjct: 14724 gcattccaaaagttgatttatgtgtcaaatattgtatttggggatgcatca 14774
to top
>gb|AC124425.3| Mus musculus BAC clone RP24-230N16 from chromosome 5, complete sequence
          Length = 178931

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 488   ctgacatgttcaaggagcatgc 509
             ||||||||||||||||||||||
Sbjct: 59051 ctgacatgttcaaggagcatgc 59030
to top
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence
          Length = 398525

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 365    gggagaatgccaaaagtctat 385
              |||||||||||||||||||||
Sbjct: 111594 gggagaatgccaaaagtctat 111614
to top
>gb|AC115904.13| Mus musculus chromosome 16, clone RP24-472P22, complete sequence
          Length = 167938

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    tactcagtacttcctccagga 134
              |||||||||||||||||||||
Sbjct: 141101 tactcagtacttcctccagga 141081
to top
>ref|XM_541752.2| PREDICTED: Canis familiaris similar to Glutamate receptor interacting
            protein 2 (GRIP2 protein), transcript variant 1
            (LOC484638), mRNA
          Length = 3192

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1    gccccaccgcgctggaggccagtga 25
            ||||||||| |||||||||||||||
Sbjct: 1393 gccccaccgtgctggaggccagtga 1369
to top
>ref|XM_853340.1| PREDICTED: Canis familiaris similar to Glutamate receptor interacting
            protein 2 (GRIP2 protein), transcript variant 3
            (LOC484638), mRNA
          Length = 3066

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1    gccccaccgcgctggaggccagtga 25
            ||||||||| |||||||||||||||
Sbjct: 1267 gccccaccgtgctggaggccagtga 1243
to top
>gb|AC123851.4| Mus musculus BAC clone RP23-323K4 from chromosome 16, complete sequence
          Length = 230221

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    tactcagtacttcctccagga 134
              |||||||||||||||||||||
Sbjct: 218165 tactcagtacttcctccagga 218185
to top
>gb|AC124336.10| Mus musculus chromosome 18, clone RP24-125A2, complete sequence
          Length = 193807

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     gctggaggccagtgaggtggc 31
              |||||||||||||||||||||
Sbjct: 162890 gctggaggccagtgaggtggc 162870
to top
>gb|AC102069.13| Mus musculus chromosome 18, clone RP23-304K8, complete sequence
          Length = 156706

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     gctggaggccagtgaggtggc 31
              |||||||||||||||||||||
Sbjct: 104451 gctggaggccagtgaggtggc 104431
to top
>gb|AC117589.13| Mus musculus chromosome 18, clone RP23-222A8, complete sequence
          Length = 211309

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 11     gctggaggccagtgaggtggc 31
              |||||||||||||||||||||
Sbjct: 153432 gctggaggccagtgaggtggc 153452
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 167      tattaaaaagttcaaaaaagc 187
                |||||||||||||||||||||
Sbjct: 16973784 tattaaaaagttcaaaaaagc 16973764



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16811535 attaaaaagttcaaaaaagc 16811554



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16804474 attaaaaagttcaaaaaagc 16804493



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16803835 attaaaaagttcaaaaaagc 16803854



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16803360 attaaaaagttcaaaaaagc 16803379



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16801450 attaaaaagttcaaaaaagc 16801469



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16799220 attaaaaagttcaaaaaagc 16799239



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16792191 attaaaaagttcaaaaaagc 16792210



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16770369 attaaaaagttcaaaaaagc 16770350



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16767819 attaaaaagttcaaaaaagc 16767800



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      attaaaaagttcaaaaaagc 187
                ||||||||||||||||||||
Sbjct: 16755485 attaaaaagttcaaaaaagc 16755466
to top
>emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 in linkage group 19,
              complete sequence
          Length = 199001

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 204    gtggatgctgcaaattggtag 224
              |||||||||||||||||||||
Sbjct: 183076 gtggatgctgcaaattggtag 183056
to top
>emb|BX649476.3| Zebrafish DNA sequence from clone DKEY-13I19 in linkage group 4,
             complete sequence
          Length = 126315

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 283   gtcttcggagatgcatcagacttca 307
             ||||| |||||||||||||||||||
Sbjct: 52608 gtctttggagatgcatcagacttca 52584
to top
>gb|AC150512.3| Bos taurus  BAC CH240-319N17 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 167026

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   cttcctccaggacatgaaga 142
             ||||||||||||||||||||
Sbjct: 96257 cttcctccaggacatgaaga 96276
to top
>gb|AC008337.8| Drosophila melanogaster clone BACR02B03, complete sequence
          Length = 169680

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     gccagtgaggtggcggccat 37
              ||||||||||||||||||||
Sbjct: 102549 gccagtgaggtggcggccat 102568
to top
>gb|AC012376.12| Drosophila melanogaster clone BACR48C12, complete sequence
          Length = 183048

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    gccagtgaggtggcggccat 37
             ||||||||||||||||||||
Sbjct: 54762 gccagtgaggtggcggccat 54781
to top
>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence
          Length = 208880

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   cttcctccaggacatgaaga 142
             ||||||||||||||||||||
Sbjct: 93248 cttcctccaggacatgaaga 93267
to top
>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence
          Length = 209820

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ccagtgaggtggcggccatc 38
              ||||||||||||||||||||
Sbjct: 106203 ccagtgaggtggcggccatc 106222
to top
>gb|AC164411.4| Mus musculus chromosome 1, clone RP23-60E6, complete sequence
          Length = 228155

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    ctattaaaaagttcaaaaaa 185
              ||||||||||||||||||||
Sbjct: 164196 ctattaaaaagttcaaaaaa 164177
to top
>gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosome 5, complete sequence
          Length = 218179

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    tttactcagtacttcctcca 131
              ||||||||||||||||||||
Sbjct: 104246 tttactcagtacttcctcca 104227
to top
>gb|AC156032.4| Mus musculus BAC clone RP24-370C21 from chromosome 12, complete
             sequence
          Length = 185641

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ctggaggccagtgaggtggc 31
             ||||||||||||||||||||
Sbjct: 43390 ctggaggccagtgaggtggc 43409
to top
>gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, complete sequence
          Length = 137867

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   tcagattgatattgctatgcggga 368
             |||||||||| |||||||||||||
Sbjct: 90521 tcagattgatgttgctatgcggga 90498
to top
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    atgaggttgctgctgacatg 495
              ||||||||||||||||||||
Sbjct: 144988 atgaggttgctgctgacatg 144969
to top
>ref|NM_133150.2| Drosophila melanogaster CG8062-RA (CG8062), mRNA
          Length = 2858

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gccagtgaggtggcggccat 37
           ||||||||||||||||||||
Sbjct: 903 gccagtgaggtggcggccat 884
to top
>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete
              sequence
          Length = 212960

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 485    ctgctgacatgttcaaggag 504
              ||||||||||||||||||||
Sbjct: 138917 ctgctgacatgttcaaggag 138936
to top
>gb|AC010596.8| Homo sapiens chromosome 5 clone CTC-483B24, complete sequence
          Length = 165193

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  tcagattgatattgctatgcggga 368
            |||||||||| |||||||||||||
Sbjct: 6627 tcagattgatgttgctatgcggga 6604
to top
>gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosome 7, complete sequence
          Length = 199337

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   cttcctccaggacatgaaga 142
             ||||||||||||||||||||
Sbjct: 44843 cttcctccaggacatgaaga 44824
to top
>gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196625

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 458  ttgcatataaactttttgatgagg 481
            |||||||||| |||||||||||||
Sbjct: 9489 ttgcatataatctttttgatgagg 9466
to top
>gb|AC115775.12| Mus musculus chromosome 8, clone RP23-125P1, complete sequence
          Length = 189510

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    attccaaaagttaatttttg 271
              ||||||||||||||||||||
Sbjct: 128327 attccaaaagttaatttttg 128308
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>emb|Z68506.1|PSIEP110 P.sativum mRNA for 110 kD chloroplast inner envelope protein IEP110
          Length = 3267

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 253 ttccaaaagttaatttttgtgtcgaatcttgtcttcggagatgcatca 300
           ||||||||||| || | |||||| ||| |||| || ||||||||||||
Sbjct: 785 ttccaaaagttgatatatgtgtcaaatattgtatttggagatgcatca 832
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>gb|AC133086.4| Mus musculus BAC clone RP24-110I11 from 6, complete sequence
          Length = 212696

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 458   ttgcatataaactttttgatgagg 481
             |||||||||| |||||||||||||
Sbjct: 61247 ttgcatataatctttttgatgagg 61270
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>gb|AF184230.1|AF184230 Drosophila melanogaster clone LD28120 BcDNA.LD28120 (BcDNA.LD28120)
           mRNA, complete cds
          Length = 2858

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gccagtgaggtggcggccat 37
           ||||||||||||||||||||
Sbjct: 877 gccagtgaggtggcggccat 858
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>gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 of 74 of the complete
              sequence
          Length = 297969

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     gccagtgaggtggcggccat 37
              ||||||||||||||||||||
Sbjct: 257871 gccagtgaggtggcggccat 257890
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>gb|AC102666.13| Mus musculus chromosome 1, clone RP23-444A8, complete sequence
          Length = 169085

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    ctattaaaaagttcaaaaaa 185
              ||||||||||||||||||||
Sbjct: 129459 ctattaaaaagttcaaaaaa 129478
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>gb|U56419.1|PSU56419 Pisum sativum import intermediate associated protein 100 mRNA,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 3282

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 253 ttccaaaagttaatttttgtgtcgaatcttgtcttcggagatgcatca 300
           ||||||||||| || | |||||| ||| |||| || ||||||||||||
Sbjct: 755 ttccaaaagttgatatatgtgtcaaatattgtatttggagatgcatca 802
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>gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, complete sequence
          Length = 151011

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   cttccatggaaacatctttt 329
             ||||||||||||||||||||
Sbjct: 21780 cttccatggaaacatctttt 21761
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>emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d5, COMPLETE SEQUENCE
          Length = 89591

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   atgcattccaaaagttaatt 267
             ||||||||||||||||||||
Sbjct: 64290 atgcattccaaaagttaatt 64309
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>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399,
             complete sequence
          Length = 94919

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ctattaaaaagttcaaaaaa 185
             ||||||||||||||||||||
Sbjct: 65880 ctattaaaaagttcaaaaaa 65899
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>gb|AC158297.3| Mus musculus chromosome 7, clone RP24-336M17, complete sequence
          Length = 196548

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 11    gctggaggccagtgaggtggcggccatc 38
             ||||| ||||||||||||||| ||||||
Sbjct: 52565 gctgggggccagtgaggtggctgccatc 52592
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>gb|M96929.1|SYOCO2CMP Synechococcus sp. carbon dioxide concentrating mechanism protein
            (ccmK, ccmL and ccmM) genes, complete cds
          Length = 3557

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 476  atgaggttgctgctgacatg 495
            ||||||||||||||||||||
Sbjct: 1143 atgaggttgctgctgacatg 1162
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 476     atgaggttgctgctgacatg 495
               ||||||||||||||||||||
Sbjct: 1475812 atgaggttgctgctgacatg 1475831


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,104,719
Number of Sequences: 3902068
Number of extensions: 5104719
Number of successful extensions: 118804
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117909
Number of HSP's gapped (non-prelim): 895
length of query: 514
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 491
effective length of database: 17,143,297,704
effective search space: 8417359172664
effective search space used: 8417359172664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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