ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basde08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_194849.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.7), mRNA Length = 816 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 444 agctcttcaagaagctcctgccgttcatcaagaagaacccattcttcaag 493 |||| ||||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct: 725 agctgttcaagaagctgctgccattgatcaagaagaatccattcctcaag 774
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 444 agctcttcaagaagctcctgccgttcatcaagaagaacccattcttcaag 493 |||| ||||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct: 58030 agctgttcaagaagctgctgccattgatcaagaagaatccattcctcaag 57981
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 444 agctcttcaagaagctcctgccgttcatcaagaagaacccattcttcaag 493 |||| ||||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct: 2876998 agctgttcaagaagctgctgccattgatcaagaagaatccattcctcaag 2876949
>dbj|AK099480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G01, full insert sequence Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 444 agctcttcaagaagctcctgccgttcatcaagaagaacccattcttcaag 493 |||| ||||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct: 782 agctgttcaagaagctgctgccattgatcaagaagaatccattcctcaag 831
>dbj|AK059665.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E08, full insert sequence Length = 1069 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 444 agctcttcaagaagctcctgccgttcatcaagaagaacccattcttcaag 493 |||| ||||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct: 767 agctgttcaagaagctgctgccattgatcaagaagaatccattcctcaag 816
>gb|DQ317534.1| Oryza sativa (japonica cultivar-group) proline-rich protein mRNA, complete cds Length = 1061 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 444 agctcttcaagaagctcctgccgttcatcaagaagaacccattcttcaag 493 |||| ||||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct: 776 agctgttcaagaagctgctgccattgatcaagaagaatccattcctcaag 825
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 444 agctcttcaagaagctcctgccgttcatcaagaagaacccattcttcaag 493 |||| ||||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct: 2876949 agctgttcaagaagctgctgccattgatcaagaagaatccattcctcaag 2876900
>ref|XM_476577.1| Oryza sativa (japonica cultivar-group), mRNA Length = 666 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 290 cccgtgccggagcacaagccgccg 313 |||||||||||||||||||||||| Sbjct: 521 cccgtgccggagcacaagccgccg 498 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 338 cccgtgccggagcacaagccgccg 361 |||||||||||||||||||||||| Sbjct: 521 cccgtgccggagcacaagccgccg 498
>gb|AF509871.1| Petunia x hybrida nam-like protein 8 (NH8) mRNA, complete cds Length = 1482 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccggagt 47 |||||||||||||||||||||||| Sbjct: 117 cggcgccggtgccggtgccggagt 94
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 338 cccgtgccggagcacaagccgccg 361 |||||||||||||||||||||||| Sbjct: 2022791 cccgtgccggagcacaagccgccg 2022768 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 290 cccgtgccggagcacaagccgccg 313 |||||||||||||||||||||||| Sbjct: 2022791 cccgtgccggagcacaagccgccg 2022768
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 338 cccgtgccggagcacaagccgccg 361 |||||||||||||||||||||||| Sbjct: 107088 cccgtgccggagcacaagccgccg 107065 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 290 cccgtgccggagcacaagccgccg 313 |||||||||||||||||||||||| Sbjct: 107088 cccgtgccggagcacaagccgccg 107065
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 ccggcgccggtgccggtgccgg 44 |||||||||||||||||||||| Sbjct: 139642 ccggcgccggtgccggtgccgg 139621
>ref|NM_006493.1| Homo sapiens ceroid-lipofuscinosis, neuronal 5 (CLN5), mRNA Length = 4080 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 ttttttgagggaattgatgat 622 ||||||||||||||||||||| Sbjct: 1935 ttttttgagggaattgatgat 1955
>ref|NM_187496.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1830 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 30 cggcgccggtgccggtgccgg 50
>ref|XM_471729.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 802 cggcgccggtgccggtgccgg 782
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 tgccgttcatcaagaagaacc 482 ||||||||||||||||||||| Sbjct: 5626779 tgccgttcatcaagaagaacc 5626799 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 ctcctgccgttcatcaagaa 477 |||||||||||||||||||| Sbjct: 5573897 ctcctgccgttcatcaagaa 5573916
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgcc 42 ||||||||||||||||||||| Sbjct: 462657 accggcgccggtgccggtgcc 462637
>ref|XM_369919.1| Magnaporthe grisea 70-15 hypothetical protein (MG06434.4) partial mRNA Length = 5571 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gccggtgccggtgccggagta 48 ||||||||||||||||||||| Sbjct: 5408 gccggtgccggtgccggagta 5388
>gb|AY657531.1| Synthetic construct Peudomonas aeruginosa clone FLH040769.01F PA4029 gene, partial cds Length = 666 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 tgccgttcatcaagaagaacc 482 ||||||||||||||||||||| Sbjct: 530 tgccgttcatcaagaagaacc 550
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgcc 42 ||||||||||||||||||||| Sbjct: 3308604 accggcgccggtgccggtgcc 3308584
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 50325 cggcgccggtgccggtgccgg 50305
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 8984050 cggcgccggtgccggtgccgg 8984070
>gb|AY180959.1| Drosophila melanogaster companion of reaper protein (Corp) mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ccggtgccggagtacaagccg 55 ||||||||||||||||||||| Sbjct: 498 ccggtgccggagtacaagccg 518
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgccggag 46 ||||| ||||||||||||||||||| Sbjct: 2826519 accggtgccggtgccggtgccggag 2826495 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccggcgccggtgccggtgccg 43 ||||||||||||||||||||| Sbjct: 172211 ccggcgccggtgccggtgccg 172191
>emb|BX649209.1| Mycobacterium ulcerans plasmid pMUM001, complete plasmid genome Length = 174155 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 6782 cggcgccggtgccggtgccgg 6802
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgcc 42 ||||||||||||||||||||| Sbjct: 3039888 accggcgccggtgccggtgcc 3039868
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 38466 cggcgccggtgccggtgccgg 38446
>gb|AC104609.10| Drosophila melanogaster X BAC RP98-39F18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165014 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ccggtgccggagtacaagccg 55 ||||||||||||||||||||| Sbjct: 160320 ccggtgccggagtacaagccg 160300
>emb|CR620773.1| full-length cDNA clone CS0DI030YJ01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1398 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 ttttttgagggaattgatgat 622 ||||||||||||||||||||| Sbjct: 467 ttttttgagggaattgatgat 487
>dbj|AK075109.1| Homo sapiens cDNA FLJ90628 fis, clone PLACE1003407, highly similar to Homo sapiens putative transmembrane protein (CLN5) mRNA Length = 2120 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 ttttttgagggaattgatgat 622 ||||||||||||||||||||| Sbjct: 511 ttttttgagggaattgatgat 531
>ref|NM_132240.2| Drosophila melanogaster Companion of reaper CG10965-RA (Corp), mRNA Length = 1079 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ccggtgccggagtacaagccg 55 ||||||||||||||||||||| Sbjct: 500 ccggtgccggagtacaagccg 520
>gb|AF022020.1|AF022020 Lycopersicon esculentum auxin-regulated IAA9 (IAA9) mRNA, partial cds Length = 298 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gcgccggtgccggtgccggag 46 ||||||||||||||||||||| Sbjct: 84 gcgccggtgccggtgccggag 64
>gb|AY060803.1| Drosophila melanogaster GH26991 full length cDNA Length = 1069 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ccggtgccggagtacaagccg 55 ||||||||||||||||||||| Sbjct: 472 ccggtgccggagtacaagccg 492
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 108911 cggcgccggtgccggtgccgg 108931
>gb|AF220816.1|AF220816 Brenneria nigrifluens strain En29277 major outer membrane protein (ompA) gene, partial cds Length = 435 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgccggag 46 ||||||||||| ||||||||||||| Sbjct: 293 accggcgccggagccggtgccggag 269
>gb|AF220815.1|AF220815 Brenneria nigrifluens strain En29275 major outer membrane protein (ompA) gene, partial cds Length = 435 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgccggag 46 ||||||||||| ||||||||||||| Sbjct: 293 accggcgccggagccggtgccggag 269
>gb|AF220814.1|AF220814 Brenneria nigrifluens strain En13028 major outer membrane protein (ompA) gene, partial cds Length = 435 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgccggag 46 ||||||||||| ||||||||||||| Sbjct: 293 accggcgccggagccggtgccggag 269
>gb|AF220813.1|AF220813 Brenneria nigrifluens strain En1391 major outer membrane protein (ompA) gene, partial cds Length = 435 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgccggag 46 ||||||||||| ||||||||||||| Sbjct: 293 accggcgccggagccggtgccggag 269
>gb|AF220812.1|AF220812 Brenneria nigrifluens strain En1575 major outer membrane protein (ompA) gene, partial cds Length = 435 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgccggag 46 ||||||||||| ||||||||||||| Sbjct: 293 accggcgccggagccggtgccggag 269
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 13824807 cggcgccggtgccggtgccgg 13824787
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 17520520 cggcgccggtgccggtgccgg 17520500
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 8981885 cggcgccggtgccggtgccgg 8981905
>gb|AE004820.1| Pseudomonas aeruginosa PAO1, section 381 of 529 of the complete genome Length = 13445 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 tgccgttcatcaagaagaacc 482 ||||||||||||||||||||| Sbjct: 1047 tgccgttcatcaagaagaacc 1067
>emb|AL929160.11| Mouse DNA sequence from clone RP23-98B9 on chromosome 2, complete sequence Length = 107366 Score = 42.1 bits (21), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tgttttgttttcgnttttttgagg 611 ||||||||||||| |||||||||| Sbjct: 51556 tgttttgttttcgattttttgagg 51579
>dbj|AK105689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C02, full insert sequence Length = 1704 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 966 cggcgccggtgccggtgccgg 946
>dbj|AK101153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D03, full insert sequence Length = 2082 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 150 cggcgccggtgccggtgccgg 170
>dbj|AK068128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C23, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccgg 44 ||||||||||||||||||||| Sbjct: 871 cggcgccggtgccggtgccgg 851
>gb|AC104928.8| Mus musculus chromosome 8, clone RP24-111K8, complete sequence Length = 177873 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 tcttcaagaatttcccccctg 506 ||||||||||||||||||||| Sbjct: 133898 tcttcaagaatttcccccctg 133918
>gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 of 74 of the complete sequence Length = 299153 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ccggtgccggagtacaagccg 55 ||||||||||||||||||||| Sbjct: 154425 ccggtgccggagtacaagccg 154405
>gb|AF068227.1|AF068227 Homo sapiens putative transmembrane protein (CLN5) mRNA, complete cds Length = 4080 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 ttttttgagggaattgatgat 622 ||||||||||||||||||||| Sbjct: 1935 ttttttgagggaattgatgat 1955
>gb|AC001226.1|AC001226 Genomic sequence from Human 13, complete sequence Length = 106988 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 ttttttgagggaattgatgat 622 ||||||||||||||||||||| Sbjct: 27467 ttttttgagggaattgatgat 27487
>gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone rp23-148b16, complete sequence Length = 202336 Score = 42.1 bits (21), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tgttttgttttcgnttttttgagg 611 ||||||||||||| |||||||||| Sbjct: 172805 tgttttgttttcgattttttgagg 172828
>ref|XM_467152.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||| ||||||||||||| Sbjct: 686 ccggcgccggcgccggtgccggag 709
>ref|XM_450467.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||| ||||||||||||| Sbjct: 335 ccggcgccggagccggtgccggag 312
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 2238701 ggcgccggtgccggtgccgg 2238720
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 tgccgatcagaaggcggctctcaa 180 |||||| ||||||||||||||||| Sbjct: 225736 tgccgagcagaaggcggctctcaa 225759
>ref|XM_362304.1| Magnaporthe grisea 70-15 hypothetical protein (MG04749.4) partial cds Length = 1221 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 601 ggcgccggtgccggtgccgg 620
>ref|XM_366062.1| Magnaporthe grisea 70-15 predicted protein (MG10282.4) partial mRNA Length = 378 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgccgga 45 ||||| |||||||||||||||||| Sbjct: 104 accggtgccggtgccggtgccgga 81
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccg 43 |||||||||||||||||||| Sbjct: 1972656 cggcgccggtgccggtgccg 1972675
>ref|XM_460530.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F04158g) partial mRNA Length = 1629 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 agctcttcaagaagctcctc 217 |||||||||||||||||||| Sbjct: 721 agctcttcaagaagctcctc 740
>gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chromosome 9, complete sequence Length = 169499 Score = 40.1 bits (20), Expect = 9.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 588 tgttttgttttcgnttttttgag 610 ||||||||||||| ||||||||| Sbjct: 108898 tgttttgttttcgtttttttgag 108876
>ref|XM_957721.1| Neurospora crassa OR74A hypothetical protein (NCU07881.1) partial mRNA Length = 909 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gccggtgccggtgccggagt 47 |||||||||||||||||||| Sbjct: 321 gccggtgccggtgccggagt 302
>ref|XM_955833.1| Neurospora crassa OR74A hypothetical protein (NCU01369.1) partial mRNA Length = 2064 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 352 ggcgccggtgccggtgccgg 371
>ref|XM_326861.1| Neurospora crassa OR74A hypothetical protein (NCU01369.1) partial mRNA Length = 2064 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 352 ggcgccggtgccggtgccgg 371
>ref|XM_328586.1| Neurospora crassa OR74A hypothetical protein (NCU07881.1) partial mRNA Length = 909 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gccggtgccggtgccggagt 47 |||||||||||||||||||| Sbjct: 321 gccggtgccggtgccggagt 302
>gb|AC134577.4| Mus musculus BAC clone RP24-79G11 from chromosome 14, complete sequence Length = 189085 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 549 tcatttgcctatttcagtatccat 572 ||||||||||||||||| |||||| Sbjct: 121539 tcatttgcctatttcagcatccat 121562
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 145598 ggcgccggtgccggtgccgg 145579
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccg 43 |||||||||||||||||||| Sbjct: 1154543 cggcgccggtgccggtgccg 1154524
>gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromosome 9, complete sequence Length = 162544 Score = 40.1 bits (20), Expect = 9.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 588 tgttttgttttcgnttttttgag 610 ||||||||||||| ||||||||| Sbjct: 215 tgttttgttttcgtttttttgag 237
>ref|XM_754741.1| Ustilago maydis 521 hypothetical protein (UM03687.1) partial mRNA Length = 1383 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cgccggtgccggtgccggag 46 |||||||||||||||||||| Sbjct: 1221 cgccggtgccggtgccggag 1240
>ref|XM_540917.2| PREDICTED: Canis familiaris similar to synaptotagmin VII gamma isoform (LOC483796), mRNA Length = 2357 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 agaagccagcgccggtgccg 271 |||||||||||||||||||| Sbjct: 404 agaagccagcgccggtgccg 423
>gb|AC122251.4| Mus musculus BAC clone RP23-167J15 from chromosome 14, complete sequence Length = 204588 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 549 tcatttgcctatttcagtatccat 572 ||||||||||||||||| |||||| Sbjct: 2669 tcatttgcctatttcagcatccat 2692
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||||| ||||||||||| Sbjct: 88423 ccggcgccggtgacggtgccggag 88446
>gb|AF543429.1| Psathyrostachys juncea chromosome 5 TCP2 gene, partial cds Length = 668 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cgccggtgccggtgccggag 46 |||||||||||||||||||| Sbjct: 331 cgccggtgccggtgccggag 312
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agctcttcaagaagctcctc 217 |||||||||||||||||||| Sbjct: 342639 agctcttcaagaagctcctc 342620
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccg 43 |||||||||||||||||||| Sbjct: 143239 cggcgccggtgccggtgccg 143258
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcgcccgacgcccgtgccgg 299 |||||||||||||||||||| Sbjct: 198365 gcgcccgacgcccgtgccgg 198384
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 accggcgccggtgccggtgccgga 45 |||||||| ||||||||||||||| Sbjct: 74270 accggcgcgggtgccggtgccgga 74247
>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11 Length = 79133 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 78714 ggcgccggtgccggtgccgg 78695
>emb|AL353822.2|NC15E6 Neurospora crassa DNA linkage group V Cosmid contig 15E6 Length = 61843 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 7908 ggcgccggtgccggtgccgg 7889
>gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 168058 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tgaccagaagatggtgcaag 425 |||||||||||||||||||| Sbjct: 166249 tgaccagaagatggtgcaag 166268
>gb|AE011709.1| Xanthomonas axonopodis pv. citri str. 306, section 87 of 469 of the complete genome Length = 10667 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccg 43 |||||||||||||||||||| Sbjct: 2788 cggcgccggtgccggtgccg 2769
>gb|AC019153.13| Mus musculus chromosome 2 clone RP23-286D16, complete sequence Length = 195068 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 185 gagacagacccccagctcttcaagaagc 212 |||||| ||||||||||||| ||||||| Sbjct: 150784 gagacacacccccagctcttgaagaagc 150757
>ref|NM_168921.1| Drosophila melanogaster CG32442-RB, transcript variant B (CG32442), mRNA Length = 918 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tgaccagaagatggtgcaag 425 |||||||||||||||||||| Sbjct: 635 tgaccagaagatggtgcaag 616
>ref|NM_168920.1| Drosophila melanogaster CG32442-RA, transcript variant A (CG32442), mRNA Length = 910 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tgaccagaagatggtgcaag 425 |||||||||||||||||||| Sbjct: 627 tgaccagaagatggtgcaag 608
>gb|AC010701.3| Drosophila melanogaster 3L BAC RP98-26P10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174920 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tgaccagaagatggtgcaag 425 |||||||||||||||||||| Sbjct: 141933 tgaccagaagatggtgcaag 141914
>gb|AY071557.1| Drosophila melanogaster RE62711 full length cDNA Length = 923 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tgaccagaagatggtgcaag 425 |||||||||||||||||||| Sbjct: 627 tgaccagaagatggtgcaag 608
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccg 43 |||||||||||||||||||| Sbjct: 3937096 cggcgccggtgccggtgccg 3937115
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccg 43 |||||||||||||||||||| Sbjct: 904250 cggcgccggtgccggtgccg 904231
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cggcgccggtgccggtgccg 43 |||||||||||||||||||| Sbjct: 134327 cggcgccggtgccggtgccg 134308
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||||| ||||||||||| Sbjct: 6305145 ccggcgccggtgacggtgccggag 6305168
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||| ||||||||||||| Sbjct: 5761218 ccggcgccggagccggtgccggag 5761195
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||| ||||||||||||| Sbjct: 26708604 ccggcgccggcgccggtgccggag 26708627
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cggcgccggtgccggtgccg 43 |||||||||||||||||||| Sbjct: 2601070 cggcgccggtgccggtgccg 2601089
>gb|AE009607.1| Brucella melitensis 16M chromosome I, section 164 of 195 of the complete sequence Length = 10140 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tgccgatcagaaggcggctctcaa 180 |||||| ||||||||||||||||| Sbjct: 2379 tgccgagcagaaggcggctctcaa 2356
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 ccccagctcttcaagaagctcctc 217 ||||||||||||||| |||||||| Sbjct: 460218 ccccagctcttcaagcagctcctc 460241
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 116235 ggcgccggtgccggtgccgg 116254
>gb|AC007207.22| Homo sapiens 12 BAC RP11-320N7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191877 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gaccagaagatggtgcaaga 426 |||||||||||||||||||| Sbjct: 151450 gaccagaagatggtgcaaga 151469
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 acgcccgtgccggagcacaa 354 |||||||||||||||||||| Sbjct: 3490755 acgcccgtgccggagcacaa 3490774 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 acgcccgtgccggagcacaa 306 |||||||||||||||||||| Sbjct: 3490755 acgcccgtgccggagcacaa 3490774
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0708H12 Length = 162381 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||| ||||||||||||| Sbjct: 70634 ccggcgccggcgccggtgccggag 70657
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 tgccgatcagaaggcggctctcaa 180 |||||| ||||||||||||||||| Sbjct: 227293 tgccgagcagaaggcggctctcaa 227316
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||| ||||||||||||| Sbjct: 57423 ccggcgccggagccggtgccggag 57400
>ref|XM_321792.2| Anopheles gambiae str. PEST ENSANGP00000016929 (ENSANGG00000014440), partial mRNA Length = 3892 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 ggtgccggtgccggagtacaagccgccg 58 |||| ||||||||||||| ||||||||| Sbjct: 879 ggtggcggtgccggagtagaagccgccg 852
>emb|AJ012301.1|ZMA012301 Zea mays mRNA for proline-rich protein Length = 1648 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 acaccgatctaccaccctcc 402 |||||||||||||||||||| Sbjct: 807 acaccgatctaccaccctcc 826
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 2902390 ggcgccggtgccggtgccgg 2902409
>dbj|AK064694.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F05, full insert sequence Length = 1473 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||| ||||||||||||| Sbjct: 686 ccggcgccggcgccggtgccggag 709
>gb|AY109604.1| Zea mays CL1298_1 mRNA sequence Length = 1739 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 acaccgatctaccaccctcc 402 |||||||||||||||||||| Sbjct: 807 acaccgatctaccaccctcc 826
>tpe|BN000066.1|AGA000066 TPA: TPA_exp: Anopheles gambiae achE1 gene for acetylcholinesterase, exons 1-6 Length = 5195 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 ggtgccggtgccggagtacaagccgccg 58 |||| ||||||||||||| ||||||||| Sbjct: 2386 ggtggcggtgccggagtagaagccgccg 2359
>gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75 of 83 of the complete sequence Length = 314904 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tgaccagaagatggtgcaag 425 |||||||||||||||||||| Sbjct: 262851 tgaccagaagatggtgcaag 262870
>emb|AJ488492.1|AGA488492 Anopheles gambiae partial achE1 gene for acetylcholinesterase, exons 4-9 Length = 2557 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 ggtgccggtgccggagtacaagccgccg 58 |||| ||||||||||||| ||||||||| Sbjct: 729 ggtggcggtgccggagtagaagccgccg 702
>gb|BT001779.1| Drosophila melanogaster RH17480 full insert cDNA Length = 849 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tgaccagaagatggtgcaag 425 |||||||||||||||||||| Sbjct: 615 tgaccagaagatggtgcaag 596
>gb|AC164978.2| Mus musculus BAC clone RP23-342O10 from chromosome 14, complete sequence Length = 206840 Score = 40.1 bits (20), Expect = 9.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 588 tgttttgttttcgnttttttgag 610 ||||||||||||| ||||||||| Sbjct: 19068 tgttttgttttcgtttttttgag 19090
>emb|AL627304.16| Mouse DNA sequence from clone RP23-285N14 on chromosome 4, complete sequence Length = 98133 Score = 40.1 bits (20), Expect = 9.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 588 tgttttgttttcgnttttttgag 610 ||||||||||||| ||||||||| Sbjct: 66151 tgttttgttttcggttttttgag 66129
>emb|AJ628642.1| Streptomyces hygroscopicus subsp. hygroscopicus genomic region of the gene cluster for hygromycin B biosynthetis, strain DSM 40578 Length = 34921 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 19496 ggcgccggtgccggtgccgg 19515
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ccggcgccggtgccggtgccggag 46 |||||||||||| ||||||||||| Sbjct: 6371612 ccggcgccggtgacggtgccggag 6371635
>emb|BX004793.12| Mouse DNA sequence from clone RP23-188D9 on chromosome 2, complete sequence Length = 161514 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 185 gagacagacccccagctcttcaagaagc 212 |||||| ||||||||||||| ||||||| Sbjct: 46284 gagacacacccccagctcttgaagaagc 46311
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ggcgccggtgccggtgccgg 44 |||||||||||||||||||| Sbjct: 24394 ggcgccggtgccggtgccgg 24413
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 tgccgatcagaaggcggctctcaa 180 |||||| ||||||||||||||||| Sbjct: 223660 tgccgagcagaaggcggctctcaa 223683 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,178,881 Number of Sequences: 3902068 Number of extensions: 5178881 Number of successful extensions: 89287 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86592 Number of HSP's gapped (non-prelim): 2684 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
