Clone Name | basde04 |
---|---|
Clone Library Name | barley_pub |
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 977 bits (493), Expect = 0.0 Identities = 550/569 (96%) Strand = Plus / Plus Query: 1 atggcacccagtaagagtattaagagtgtggtcatttgtgttctcatactaggtttagtt 60 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19 atggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagtt 78 Query: 61 ctggagcaggtccaggtggagggaaagagttgctgcaagaccacgtttgccagaaactgc 120 |||||||||||||||||||||||||| |||||||||||| |||||| || ||||||||| Sbjct: 79 ctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgc 138 Query: 121 tacaacacttgccgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgt 180 ||||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 139 tacaacacttgccatttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgt 198 Query: 181 aaaatcataagcggttcaaaatgtcctagtgactatcctaaactgaatcttctccctgaa 240 ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 199 aaaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaa 258 Query: 241 tccggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgac 300 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 259 tccggtgaaccagatgtcacgcagtactgcaccattggatgcaggaattctgtctgtgac 318 Query: 301 aacgtggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaac 360 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 aacatggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaac 378 Query: 361 gcatgtgcccgtttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 gcatgtgcccgtttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgc 438 Query: 421 gttcttgtgcatgatttctatggccaaggtcgtatagtcattttgtcttgaataatcttg 480 ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 439 cttcttgtgcatgatttctatggccatggtcgtattgtcattttgtcttgaataatcttg 498 Query: 481 ataccatcagctgtatggaagccaatgtatcatcttacttatgtatttgtctttttccct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 ataccatcagctgtatggaagccaatgtatcatcttacttatgtatttgtctttttccct 558 Query: 541 tgttccaataagagtcgccacgatgaatc 569 ||||||||||||||||||||||||||||| Sbjct: 559 tgttccaataagagtcgccacgatgaatc 587
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 930 bits (469), Expect = 0.0 Identities = 544/569 (95%) Strand = Plus / Plus Query: 1 atggcacccagtaagagtattaagagtgtggtcatttgtgttctcatactaggtttagtt 60 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 26 atggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagtt 85 Query: 61 ctggagcaggtccaggtggagggaaagagttgctgcaagaccacgtttgccagaaactgc 120 |||||||||||||||||||||||||| |||||||||||| |||||| || ||||||||| Sbjct: 86 ctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgc 145 Query: 121 tacaacacttgccgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgt 180 |||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 146 tacaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgt 205 Query: 181 aaaatcataagcggttcaaaatgtcctagtgactatcctaaactgaatcttctccctgaa 240 ||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 206 aaaatcataagtggtccaaaatgccctagtgactatcctaaacttaatcttctccctgaa 265 Query: 241 tccggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 tccggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgac 325 Query: 301 aacgtggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaac 360 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 aacatggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaac 385 Query: 361 gcatgtgcccgtttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgc 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 gcatgtgcccgtttttgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgc 445 Query: 421 gttcttgtgcatgatttctatggccaaggtcgtatagtcattttgtcttgaataatcttg 480 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 446 cttcttgtgcatgatttctatggccaaggtcgtattgtcattttgtcttgaataatcttg 505 Query: 481 ataccatcagctgtatggaagccaatgtatcatcttacttatgtatttgtctttttccct 540 |||||||||||||||| |||| |||||||||||||||||||| |||| | ||||||||| Sbjct: 506 ataccatcagctgtatcgaaggaaatgtatcatcttacttatgcatttctgtttttccct 565 Query: 541 tgttccaataagagtcgccacgatgaatc 569 |||||||||||| |||||||||||||||| Sbjct: 566 tgttccaataagggtcgccacgatgaatc 594
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 662 bits (334), Expect = 0.0 Identities = 394/414 (95%) Strand = Plus / Plus Query: 156 agtctgtgcaggtgcttgtggttgtaaaatcataagcggttcaaaatgtcctagtgacta 215 |||||| |||||||||||| |||||||||||||||| ||| ||||||| ||||||||||| Sbjct: 1 agtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgacta 60 Query: 216 tcctaaactgaatcttctccctgaatccggtgaaccagatgtcactcagtactgcaccat 275 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 tcctaaacttaatcttctccctgaatccggtgaacccgatgtcactcagtactgcaccat 120 Query: 276 tggatgcaggaattctgtctgtgacaacgtggacaatgttttccgtggccaagagatgaa 335 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 121 tggatgcaggaattctgtctgtgacaacatggacaatgttttccatggccaagagatgaa 180 Query: 336 attcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgcagtcat 395 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 181 attcgacatgggactctgcagcaacgcatgtgcccgtttttgtaatgatggtgcagtcat 240 Query: 396 tcagtctgttgaagcctaatcatgcgttcttgtgcatgatttctatggccaaggtcgtat 455 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 241 tcagtctgttgaatcctaatcatgccttcttgtgcatgatttctatggccaaggtcgtat 300 Query: 456 agtcattttgtcttgaataatcttgataccatcagctgtatggaagccaatgtatcatct 515 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 301 tgtcattttgtcttgaataatcttgataccatcagctgtatcgaaggaaatgtatcatct 360 Query: 516 tacttatgtatttgtctttttcccttgttccaataagagtcgccacgatgaatc 569 |||||||| |||| | ||||||||||||||||||||| |||||||||||||||| Sbjct: 361 tacttatgcatttctgtttttcccttgttccaataagggtcgccacgatgaatc 414
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 630 bits (318), Expect = e-177 Identities = 500/558 (89%), Gaps = 2/558 (0%) Strand = Plus / Plus Query: 13 aagagtattaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtc 72 |||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||| Sbjct: 56 aagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtc 115 Query: 73 caggtggagggaaagagttgctgcaagaccacgtttgccagaaactgctacaacacttgc 132 || || || | |||||||||||||||| |||| | |||||||||||||||| | ||| Sbjct: 116 caagtagaagccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgc 175 Query: 133 cgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgtaaaatcataagc 192 |||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 176 cgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagc 235 Query: 193 ggttcaaaatgtcctagtgactatcctaaactgaatcttctccctgaatccggtgaacca 252 || ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 236 ggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacca 295 Query: 253 gatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaacgtggacaat 312 ||| ||| |||||||||| ||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 296 aatgcgactgagtactgcacaattggatgccggacttccgtctgtgacaacatggacaat 355 Query: 313 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 415 Query: 373 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgcgttcttgtgcat 432 |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 416 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 475 Query: 433 gatttctatggccaaggtcgtatagtcattttgtcttgaataatcttgataccatcagct 492 ||||||||||||||||||||| | |||||||| | || || |||||||||||||||| | Sbjct: 476 gatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgataccatcacca 535 Query: 493 gtatggaagccaatgtatcatcttacttatgtatttgt-ctttttcccttgttccaataa 551 | || ||||| |||||||||||||| |||||||||| | ||||||||| |||||||||| Sbjct: 536 g-atcgaagcaaatgtatcatcttagttatgtatttctgttttttccctcgttccaataa 594 Query: 552 gagtcgccacgatgaatc 569 ||| |||||||||||| Sbjct: 595 gagaacccacgatgaatc 612
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 628 bits (317), Expect = e-177 Identities = 484/537 (90%), Gaps = 2/537 (0%) Strand = Plus / Plus Query: 34 atttgtgttctcatactaggtttagttctggagcaggtccaggtggagggaaagagttgc 93 ||||||||||||||| | ||||||||||||||||||||||| || || || ||||||||| Sbjct: 4 atttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgc 63 Query: 94 tgcaagaccacgtttgccagaaactgctacaacacttgccgtttcgccggtggttcccgt 153 ||||||| |||| | |||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 64 tgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgctggtggttcccga 123 Query: 154 ccagtctgtgcaggtgcttgtggttgtaaaatcataagcggttcaaaatgtcctagtgac 213 |||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||| ||| Sbjct: 124 ccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagggac 183 Query: 214 tatcctaaactgaatcttctccctgaatccggtgaaccagatgtcactcagtactgcacc 273 |||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||| Sbjct: 184 tatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgcaca 243 Query: 274 attggatgcaggaattctgtctgtgacaacgtggacaatgttttccgtggccaagagatg 333 ||||||||||||| ||| |||||||||||| |||||||||||| |||||||||||||||| Sbjct: 244 attggatgcaggacttccgtctgtgacaacatggacaatgtttcccgtggccaagagatg 303 Query: 334 aaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgcagtc 393 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 304 aaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaagtc 363 Query: 394 attcagtctgttgaagcctaatcatgcgttcttgtgcatgatttctatggccaaggtcgt 453 ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 364 attcagtctcttgaagcctaatcatgccttcttgggcatgatttctatggccaaggtcgt 423 Query: 454 atagtcattttgtcttgaataatcttgataccatcagctgtatggaagccaatgtatcat 513 | |||||||| | || || |||||||||||||||| | || ||||| |||||||||| Sbjct: 424 tttgtcattttctgttcaacaatcttgataccatca-ccacatcgaagcaaatgtatcat 482 Query: 514 cttacttatgtatttgt-ctttttcccttgttccaataagagtcgccacgatgaatc 569 |||| |||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 483 cttagttatgtatttctgttttttccctcgttccaataagagtcgccacgatgaatc 539
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 624 bits (315), Expect = e-176 Identities = 488/543 (89%), Gaps = 2/543 (0%) Strand = Plus / Plus Query: 13 aagagtattaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtc 72 |||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||| Sbjct: 56 aagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtc 115 Query: 73 caggtggagggaaagagttgctgcaagaccacgtttgccagaaactgctacaacacttgc 132 || || || | |||||||||||||||| |||| | |||||||||||||||| | ||| Sbjct: 116 caagtagaagccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgc 175 Query: 133 cgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgtaaaatcataagc 192 |||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 176 cgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagc 235 Query: 193 ggttcaaaatgtcctagtgactatcctaaactgaatcttctccctgaatccggtgaacca 252 || ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 236 ggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacca 295 Query: 253 gatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaacgtggacaat 312 ||| ||| |||||||||| ||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 296 aatgcgactgagtactgcacaattggatgccggacttccgtctgtgacaacatggacaat 355 Query: 313 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 415 Query: 373 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgcgttcttgtgcat 432 |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 416 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 475 Query: 433 gatttctatggccaaggtcgtatagtcattttgtcttgaataatcttgataccatcagct 492 ||||||||||||||||||||| | |||||||| | || || |||||||||||||||| | Sbjct: 476 gatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgataccatcacca 535 Query: 493 gtatggaagccaatgtatcatcttacttatgtatttgt-ctttttcccttgttccaataa 551 | || ||||| |||||||||||||| |||||||||| | ||||||||| |||||||||| Sbjct: 536 g-atcgaagcaaatgtatcatcttagttatgtatttctgttttttccctcgttccaataa 594 Query: 552 gag 554 ||| Sbjct: 595 gag 597
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 589 bits (297), Expect = e-165 Identities = 432/477 (90%) Strand = Plus / Plus Query: 13 aagagtattaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtc 72 |||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||| Sbjct: 56 aagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtc 115 Query: 73 caggtggagggaaagagttgctgcaagaccacgtttgccagaaactgctacaacacttgc 132 || || || | |||||||||||||||| |||| | |||||||||||||||| | ||| Sbjct: 116 caagtagaagccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgc 175 Query: 133 cgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgtaaaatcataagc 192 |||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 176 cgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagc 235 Query: 193 ggttcaaaatgtcctagtgactatcctaaactgaatcttctccctgaatccggtgaacca 252 || ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 236 ggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacca 295 Query: 253 gatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaacgtggacaat 312 ||| ||| |||||||||| ||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 296 aatgcgactgagtactgcacaattggatgccggacttccgtctgtgacaacatggacaat 355 Query: 313 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 415 Query: 373 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgcgttcttgtgcat 432 |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 416 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 475 Query: 433 gatttctatggccaaggtcgtatagtcattttgtcttgaataatcttgataccatca 489 ||||||||||||||||||||| | |||||||| | || || |||||||||||||||| Sbjct: 476 gatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgataccatca 532
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 551 bits (278), Expect = e-154 Identities = 412/454 (90%), Gaps = 2/454 (0%) Strand = Plus / Plus Query: 117 ctgctacaacacttgccgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtgg 176 |||||||||| | ||||||||||||||||||||||| |||||||| ||| ||||||||| Sbjct: 1 ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 60 Query: 177 ttgtaaaatcataagcggttcaaaatgtcctagtgactatcctaaactgaatcttctccc 236 |||||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||| Sbjct: 61 ttgtaaaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccc 120 Query: 237 tgaatccggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctg 296 |||||||||||||||| ||| ||| |||||||||| ||||||||||||| ||| ||||| Sbjct: 121 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctg 180 Query: 297 tgacaacgtggacaatgttttccgtggccaagagatgaaattcgacatgggactctgcag 356 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgacaacctggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 240 Query: 357 caacgcatgtgcccgtttctgtaatgatggtgcagtcattcagtctgttgaagcctaatc 416 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 241 caacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatc 300 Query: 417 atgcgttcttgtgcatgatttctatggccaaggtcgtatagtcattttgtcttgaataat 476 |||| |||||| ||||||||||||||||||||||||| | ||||||| | || || ||| Sbjct: 301 atgccttcttgggcatgatttctatggccaaggtcgttttttcattttctgttcaacaat 360 Query: 477 cttgataccatcagctgtatggaagccaatgtatcatcttacttatgtatttgt-ctttt 535 ||||||||||||| | | || ||||| |||||||||||||| |||||||||| | |||| Sbjct: 361 cttgataccatcaccag-atcgaagcaaatgtatcatcttagttatgtatttctgttttt 419 Query: 536 tcccttgttccaataagagtcgccacgatgaatc 569 ||||| ||||||||||||||| |||||||||||| Sbjct: 420 tccctcgttccaataagagtcaccacgatgaatc 453
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 511 bits (258), Expect = e-142 Identities = 366/402 (91%) Strand = Plus / Plus Query: 13 aagagtattaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtc 72 |||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||| Sbjct: 13 aagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtc 72 Query: 73 caggtggagggaaagagttgctgcaagaccacgtttgccagaaactgctacaacacttgc 132 || || || || |||||||||||||||| |||| | |||||||||||||||| | ||| Sbjct: 73 caagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgc 132 Query: 133 cgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgtaaaatcataagc 192 | |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 133 catttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagc 192 Query: 193 ggttcaaaatgtcctagtgactatcctaaactgaatcttctccctgaatccggtgaacca 252 || ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 193 ggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatccggtgaacca 252 Query: 253 gatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaacgtggacaat 312 ||| ||| |||||||||| ||||||||||||| ||| |||||||||||| |||||||| Sbjct: 253 aatgcgactgagtactgcacaattggatgcaggacttccgtctgtgacaacatggacaat 312 Query: 313 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372 Query: 373 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaa 414 |||||||||||||||| |||||||||||||||||||||||| Sbjct: 373 ttctgtaatgatggtgatgtcattcagtctgttgaagcctaa 414
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 486 bits (245), Expect = e-134 Identities = 254/257 (98%) Strand = Plus / Plus Query: 313 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2031 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 2090 Query: 373 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgcgttcttgtgcat 432 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2091 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcat 2150 Query: 433 gatttctatggccaaggtcgtatagtcattttgtcttgaataatcttgataccatcagct 492 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2151 gatttctatggccaaggtcgtattgtcattttgtcttgaataatcttgataccatcagct 2210 Query: 493 gtatggaagccaatgtatcatcttacttatgtatttgtctttttcccttgttccaataag 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2211 gtatggaagccaatgtatcatcttacttatgtatttgtctttttcccttgttccaacaag 2270 Query: 553 agtcgccacgatgaatc 569 ||||||||||||||||| Sbjct: 2271 agtcgccacgatgaatc 2287 Score = 377 bits (190), Expect = e-101 Identities = 232/246 (94%) Strand = Plus / Plus Query: 1 atggcacccagtaagagtattaagagtgtggtcatttgtgttctcatactaggtttagtt 60 ||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 1531 atggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactggttttagtt 1590 Query: 61 ctggagcaggtccaggtggagggaaagagttgctgcaagaccacgtttgccagaaactgc 120 |||||||||||||||||||||||||| |||||||||||| |||||| || ||||||||| Sbjct: 1591 ctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgc 1650 Query: 121 tacaacacttgccgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgt 180 |||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| Sbjct: 1651 tacaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgt 1710 Query: 181 aaaatcataagcggttcaaaatgtcctagtgactatcctaaactgaatcttctccctgaa 240 ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1711 aaaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaa 1770 Query: 241 tccggt 246 |||||| Sbjct: 1771 tccggt 1776 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 244 ggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaac 303 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1868 ggtgaaccagatgtcactcagtactgcaccattggatgcacgaattctgtctgtgacaac 1927 Query: 304 gtggacaatg 313 ||||||||| Sbjct: 1928 atggacaatg 1937
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 266 bits (134), Expect = 7e-68 Identities = 209/234 (89%) Strand = Plus / Plus Query: 13 aagagtattaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtc 72 |||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||| Sbjct: 1564 aagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtc 1623 Query: 73 caggtggagggaaagagttgctgcaagaccacgtttgccagaaactgctacaacacttgc 132 || || || || |||||||||||||||| |||| | |||||||||||||||| | ||| Sbjct: 1624 caagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgc 1683 Query: 133 cgtttcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgtaaaatcataagc 192 |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct: 1684 cgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagc 1743 Query: 193 ggttcaaaatgtcctagtgactatcctaaactgaatcttctccctgaatccggt 246 || ||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 1744 ggcccaacctgtcctagggactatcctaagctgaatcttctccctgaatccggt 1797 Score = 264 bits (133), Expect = 3e-67 Identities = 166/177 (93%) Strand = Plus / Plus Query: 313 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 372 |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2054 gtttcccgtggccaagagatgaaatttgacatgggactctgcagcaacgcatgtgcccgt 2113 Query: 373 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgcgttcttgtgcat 432 |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 2114 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgggcat 2173 Query: 433 gatttctatggccaaggtcgtatagtcattttgtcttgaataatcttgataccatca 489 ||||||||||||||||||||| | |||||||| | || || |||||||||||||||| Sbjct: 2174 gatttctatggccaaggtcgttttgtcattttctgttcaacaatcttgataccatca 2230 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 244 ggtgaaccagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaac 303 ||||||||| |||| ||| |||||||||| ||||||||||||| ||| || ||||||||| Sbjct: 1894 ggtgaaccaaatgtgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 1953 Query: 304 gtggacaatg 313 ||||||||| Sbjct: 1954 atggacaatg 1963
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 242 bits (122), Expect = 1e-60 Identities = 355/432 (82%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 20 ttaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccaggtgg 79 ||||| ||||||| ||||||| ||| |||||||||||||||||| |||||||||||| | Sbjct: 68 ttaagtgtgtggtgctttgtgtcctcgtactaggtttagttctggggcaggtccaggtag 127 Query: 80 agggaaagagttgctgcaagaccacgtttgccagaaactgctacaacacttgccgtttcg 139 ||||||||||||||||| || ||| | ||| ||||||||||| ||| |||||||| Sbjct: 128 agggaaagagttgctgcccgagcacatctgcaagaaactgctataacgtctgccgtttaa 187 Query: 140 ccggtggttcccgtccagtctgtgcaggtgcttgtggttgtaaaatcataagcggttcaa 199 ||||| |||||| ||| ||| ||| | |||||| ||||||||| || ||| || Sbjct: 188 ccggtacttcccggccacgctgcgcatctctttgtggatgtaaaatcgtagacgg---aa 244 Query: 200 aatgtcctagtgactatcctaaactgaatcttctccctgaatccggtgaaccagatgtca 259 ||||||| || |||| |||||||| ||||||| | ||||||||||||||| ||||||| Sbjct: 245 catgtcctgatggctattctaaactgcatcttctacttgaatccggtgaaccggatgtca 304 Query: 260 ctcagtactgcaccattggatgcaggaattctgtctgtgacaacgtggacaatgttttcc 319 || ||||||||||||| ||||||| || ||| || ||||||||| ||||||||||| | | Sbjct: 305 ctgagtactgcaccataggatgcatgacttccgtttgtgacaacatggacaatgttattc 364 Query: 320 gtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgta 379 |||||||||||||||| |||||||| |||||||| ||| | ||||| |||||||||| Sbjct: 365 atggccaagagatgaaaatcgacatgctactctgcaacaaagaatgtgttcgtttctgta 424 Query: 380 atgatggtgcagtcattcagtctgttgaagcctaatcatgcgttcttgtgcatgatttct 439 | | ||||| ||||||| ||| | |||| ||||||||| ||||||||||||||||| Sbjct: 425 acaagggtgccgtcattccatctttccaagcttaatcatgcactcttgtgcatgatttct 484 Query: 440 atggccaaggtc 451 ||||| ||||| Sbjct: 485 ttggccgaggtc 496
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 133 bits (67), Expect = 7e-28 Identities = 232/287 (80%) Strand = Plus / Plus Query: 17 gtattaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagg 76 |||| ||||||| || |||||| | ||||| || ||||||||||||||||||||||||| Sbjct: 98 gtatcaagagtgctgttatttgtttcctcatgctgggtttagttctggagcaggtccagg 157 Query: 77 tggagggaaagagttgctgcaagaccacgtttgccagaaactgctacaacacttgccgtt 136 | ||||| |||||||||||||||| |||| || | |||||||||||| ||||||| Sbjct: 158 tagagggcaagagttgctgcaagagcacgacggcaataaactgctacaatgtctgccgtt 217 Query: 137 tcgccggtggttcccgtccagtctgtgcaggtgcttgtggttgtaaaatcataagcggtt 196 | || |||| | | || |||||||| |||||| | |||||||||||| || || || | Sbjct: 218 tagctggtgctccgcgcccagtctgcgcaggtccatgtggttgtaaactcttagacgtta 277 Query: 197 caaaatgtcctagtgactatcctaaactgaatcttctccctgaatccggtgaaccagatg 256 ||| ||||| ||||| | ||||||| | |||||||| |||||| ||||||| |||||| Sbjct: 278 caacttgtccaagtgattggcctaaacagcatcttctctctgaatacggtgaagcagatg 337 Query: 257 tcactcagtactgcaccattggatgcaggaattctgtctgtgacaac 303 || |||||||||| |||||||||| || ||| || ||||||||| Sbjct: 338 cagctgagtactgcactattggatgcatgacttccgtttgtgacaac 384 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 319 cgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgt 378 ||||||||||||||||| |||||||| | |||||| ||||||||||| |||||||||| Sbjct: 415 cgtggccaagagatgaacatcgacatgcaagtctgcaacaacgcatgtgtccgtttctgt 474 Query: 379 aatgatggtgcagtcattcagtctgttgaagcctaatcatgcgttcttgtgcatgatttc 438 || | ||||| |||| || ||||| | |||||||||||| ||| |||| | ||||| Sbjct: 475 aacaagggtgccgtcaatccatctgtcggggcctaatcatgcactctcgtgccttatttc 534 Query: 439 tatggccaaggtcgt 453 |||||||| |||||| Sbjct: 535 tatggccatggtcgt 549
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 20 ttaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccaggtgg 79 ||||||||||||||||||||||||| || | || ||||||||||||| ||||| || | Sbjct: 42 ttaagagtgtggtcatttgtgttcttgtattggggatagttctggagcatgtccaagtag 101 Query: 80 agggaaagagttgctgcaag 99 |||||||||||||||||||| Sbjct: 102 agggaaagagttgctgcaag 121
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 20 ttaagagtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccaggtgg 79 |||||||||| ||||||||||| || || | || ||||||||||||||||||| || | Sbjct: 43 ttaagagtgtagtcatttgtgtccttgtattggggatagttctggagcaggtccaagtag 102 Query: 80 agggaaagagttgctgcaag 99 |||||||||||||||||||| Sbjct: 103 agggaaagagttgctgcaag 122
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 43 ctcatactaggtttagttctggagcaggtccaggtggagggaaagagttgctgcaagacc 102 |||||||| || || |||||||| ||||| || || || ||||||||||||||||||| | Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggaaagagttgctgcaagagc 108 Query: 103 acgtttgccagaaactgctacaacacttgccgt 135 || | | ||||||||||||||| ||||||| Sbjct: 109 accctaggaagaaactgctacaacctttgccgt 141
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 43 ctcatactaggtttagttctggagcaggtccaggtggagggaaagagttgctgcaagacc 102 |||||||| || || |||||||| ||||| || || || || |||||||||||||||| | Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 108 Query: 103 acgtttgccagaaactgctacaac 126 || | | ||||||||||||||| Sbjct: 109 accctaggaagaaactgctacaac 132
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 43 ctcatactaggtttagttctggagcaggtccaggtggagggaaagagttgctgcaagacc 102 |||||||| || || |||||||| ||||| || || || || ||||||||||||| |||| Sbjct: 106 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 165 Query: 103 acgtttgccagaaactgctacaac 126 || | | ||||||||||||||| Sbjct: 166 accctgggaagaaactgctacaac 189
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 43 ctcatactaggtttagttctggagcaggtccaggtggagggaaagagttgctgcaagacc 102 |||||||| || || |||||||| ||||| || || || || ||||||||||||| |||| Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 108 Query: 103 acgtttgccagaaactgctacaac 126 || | | ||||||||||||||| Sbjct: 109 accctgggaagaaactgctacaac 132
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 43 ctcatactaggtttagttctggagcaggtccaggtggagggaaagagttgctgcaagacc 102 |||||||| || || |||||||| ||||| || || || || |||||||||||||||| | Sbjct: 57 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 116 Query: 103 acgtttgccagaaactgctacaac 126 || | | ||||||||||||||| Sbjct: 117 accctaggaagaaactgctacaac 140
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 43 ctcatactaggtttagttctggagcaggtccaggtggagggaaagagttgctgcaagacc 102 |||||||| || || |||||||| ||||| || || || || ||||||||||||| |||| Sbjct: 94 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 153 Query: 103 acgtttgccagaaactgctacaac 126 || | | ||||||||||||||| Sbjct: 154 accctgggaagaaactgctacaac 177
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 tgtatttgtctttttcccttgt 543 |||||||||||||||||||||| Sbjct: 6887 tgtatttgtctttttcccttgt 6908
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 tgtatttgtctttttcccttgt 543 |||||||||||||||||||||| Sbjct: 86346 tgtatttgtctttttcccttgt 86367
>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159706 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 520 tatgtatttgtctttttccctt 541 |||||||||||||||||||||| Sbjct: 85272 tatgtatttgtctttttccctt 85293
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 tgtatttgtctttttcccttgt 543 |||||||||||||||||||||| Sbjct: 41802 tgtatttgtctttttcccttgt 41781
>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence Length = 155706 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 519 ttatgtatttgtctttttcccttgt 543 |||||||||| |||||||||||||| Sbjct: 114751 ttatgtatttttctttttcccttgt 114727
>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence Length = 179399 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 519 ttatgtatttgtctttttcccttgt 543 |||||||||| |||||||||||||| Sbjct: 54564 ttatgtatttttctttttcccttgt 54540
>ref|NM_019741.2| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 5 (Slc2a5), mRNA Length = 3097 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aaagagttgctgcaagacca 103 |||||||||||||||||||| Sbjct: 2442 aaagagttgctgcaagacca 2461
>gb|BC023500.1| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 5, mRNA (cDNA clone MGC:32452 IMAGE:5043284), complete cds Length = 2080 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aaagagttgctgcaagacca 103 |||||||||||||||||||| Sbjct: 1817 aaagagttgctgcaagacca 1836
>gb|AY587193.1| Araneus ventricosus flagelliform silk protein-1 (Ff1) mRNA, partial cds Length = 1836 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tggagcaggtccaggtggag 81 |||||||||||||||||||| Sbjct: 391 tggagcaggtccaggtggag 410
>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and glucosyltransferase S Length = 10125 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tcttgataccatcagctgta 495 |||||||||||||||||||| Sbjct: 2469 tcttgataccatcagctgta 2450
>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6, complete sequence Length = 171645 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 agagtattaagagtgtggtcattt 37 |||||||||||||||| ||||||| Sbjct: 51282 agagtattaagagtgttgtcattt 51305
>gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, complete sequence Length = 31443 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ttatgtatttgtctttttcc 538 |||||||||||||||||||| Sbjct: 11792 ttatgtatttgtctttttcc 11773
>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17, complete sequence Length = 120315 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gtgcagtcattcagtctgtt 405 |||||||||||||||||||| Sbjct: 61602 gtgcagtcattcagtctgtt 61583
>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence Length = 163612 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ttatgtatttgtctttttcc 538 |||||||||||||||||||| Sbjct: 160175 ttatgtatttgtctttttcc 160156
>dbj|AK029720.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930505E07 product:solute carrier family 2 (facilitated glucose transporter), member 5, full insert sequence Length = 3097 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aaagagttgctgcaagacca 103 |||||||||||||||||||| Sbjct: 2442 aaagagttgctgcaagacca 2461
>tpg|BK000650.1| TPA: TPA_exp: Mus musculus otopetrin 1 isoform a and isoform b (Otop1) gene, complete cds; alternatively spliced Length = 28272 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gtctgtgacaacgtggacaa 311 |||||||||||||||||||| Sbjct: 14624 gtctgtgacaacgtggacaa 14605
>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete sequence Length = 91841 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aaagagttgctgcaagacca 103 |||||||||||||||||||| Sbjct: 55311 aaagagttgctgcaagacca 55330
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 gttctggagcaggtccaggtggag 81 |||||||||||||| ||||||||| Sbjct: 70411 gttctggagcaggttcaggtggag 70388
>gb|AF161071.1|AF161071 Mus musculus fructose transporter GLUT5 mRNA, complete cds Length = 2069 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aaagagttgctgcaagacca 103 |||||||||||||||||||| Sbjct: 1806 aaagagttgctgcaagacca 1825
>gb|AC084071.20| Mus musculus strain C57BL/6J chromosome 5 clone rp23-426e16, complete sequence Length = 194175 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gtctgtgacaacgtggacaa 311 |||||||||||||||||||| Sbjct: 78086 gtctgtgacaacgtggacaa 78067
>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence Length = 192355 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 catcttacttatgtatttgt 530 |||||||||||||||||||| Sbjct: 111193 catcttacttatgtatttgt 111212
>gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inner membrane protein (LBR) gene, 5' UTR, exons 1 and 2 Length = 5132 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ttatgtatttgtctttttcc 538 |||||||||||||||||||| Sbjct: 4779 ttatgtatttgtctttttcc 4760
>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete cds, and gtfK gene, 5' end Length = 4941 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tcttgataccatcagctgta 495 |||||||||||||||||||| Sbjct: 2469 tcttgataccatcagctgta 2450 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,838,472 Number of Sequences: 3902068 Number of extensions: 4838472 Number of successful extensions: 92644 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92560 Number of HSP's gapped (non-prelim): 67 length of query: 569 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 546 effective length of database: 17,143,297,704 effective search space: 9360240546384 effective search space used: 9360240546384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)