>CLAT_RAT (P32738) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 639

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 196 KNLKFLTYKLKILNVSFSKKEKYCIRQGVMVFLVA*YHRL 315
           KNL F+ YK      +F KK+KY     + V L   Y+RL
Sbjct: 398 KNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRL 437

>CHLB_CYAPA (P48099) Light-independent protochlorophyllide reductase subunit B|
           (EC 1.18.-.-) (LI-POR subunit B) (DPOR subunit B)
          Length = 440

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 192 EKEEDPGLCIRTMYTAILLIIQQDLQNFRYSKLVNS 85
           +KEE P L + T  T    I+Q+DLQNF     +NS
Sbjct: 81  DKEEQPDLIVLTP-TCTSSILQEDLQNFVEQASLNS 115

>KSGA_EHRRW (Q5HBC6) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 262

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 169 LHQDDVYSHFINYSTRPSEFQIFQIGQLAGTQQSS 65
           +H  D+    +NY+   S F I +IG   GT   S
Sbjct: 18  IHSTDITDKIVNYAGNISNFSIIEIGPGLGTMTYS 52

>KSGA_EHRRG (Q5FH30) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 262

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 169 LHQDDVYSHFINYSTRPSEFQIFQIGQLAGTQQSS 65
           +H  D+    +NY+   S F I +IG   GT   S
Sbjct: 18  IHSTDITDKIVNYAGNISNFSIIEIGPGLGTMTYS 52

>TERT_SCHPO (O13339) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase|
           catalytic subunit)
          Length = 988

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 23/97 (23%), Positives = 44/97 (45%)
 Frame = +1

Query: 103 ISEILKVLLNN**NGCIHRPDAEAGVLLLFEKNLKFLTYKLKILNVSFSKKEKYCIRQGV 282
           ++ ILK L+N          +  +G+    E  +K LT+K  +L      ++KY +R   
Sbjct: 542 VASILKHLIN----------EESSGIPFNLEVYMKLLTFKKDLLKHRMFGRKKYFVR--- 588

Query: 283 MVFLVA*YHRLKGPSDGFF*ERKKRFTENRIIVELYS 393
            + + + Y R+K   D  F   KK+  +   ++  Y+
Sbjct: 589 -IDIKSCYDRIK--QDLMFRIVKKKLKDPEFVIRKYA 622

>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3|
          Length = 1396

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
 Frame = -3

Query: 165  IRTMYTAILLIIQ----------QDLQNFRYSKLVNSQ---------ERNSPPQLHTTAF 43
            I T+Y  +L + Q           DLQNF  +K+V+ +         E  + P + + AF
Sbjct: 1007 IDTLYERVLALSQGLIAADQLSFTDLQNFEETKIVDEEEFFKSFLVFENKNSPNMSSNAF 1066

Query: 42   KFRTRTDAA 16
            + RT   +A
Sbjct: 1067 ESRTDNSSA 1075


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,547,583
Number of Sequences: 219361
Number of extensions: 1065624
Number of successful extensions: 2253
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2253
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)