>PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 140

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 30/47 (63%), Positives = 32/47 (68%)
 Frame = +2

Query: 2   PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142
           PIY  EEW+ +GD YAGGTTGLLIWAVT           VYNTSALA
Sbjct: 93  PIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGLLAGGALLVYNTSALA 139

>PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 138

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 29/47 (61%), Positives = 31/47 (65%)
 Frame = +2

Query: 2   PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142
           PIYTPEEWS SGD Y GG TGL +WAVT           VY+TSALA
Sbjct: 91  PIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILLGGALLVYSTSALA 137

>PSBR_SOLTU (P06183) Photosystem II 10 kDa polypeptide, chloroplast precursor|
           (Light-inducible tissue-specific ST-LS1 protein)
          Length = 138

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 29/47 (61%), Positives = 30/47 (63%)
 Frame = +2

Query: 2   PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142
           PIY  +EWS SGD Y GGTTGL IWAVT           VYNTSALA
Sbjct: 91  PIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALA 137

>PSBR_LYCES (Q40163) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 138

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 29/47 (61%), Positives = 30/47 (63%)
 Frame = +2

Query: 2   PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142
           PIY  +EWS SGD Y GGTTGL IWAVT           VYNTSALA
Sbjct: 91  PIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALA 137

>PSBR_BRACM (P49108) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 141

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 28/47 (59%), Positives = 29/47 (61%)
 Frame = +2

Query: 2   PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142
           PIY  +EWS SGD Y GG TGL IWAVT           VYNTSALA
Sbjct: 94  PIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALA 140

>PSBR_ARATH (P27202) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 140

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 28/47 (59%), Positives = 28/47 (59%)
 Frame = +2

Query: 2   PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142
           PIY   EWS SGD Y GG TGL IWAVT           VYNTSALA
Sbjct: 93  PIYNENEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALA 139

>PSBR_TOBAC (Q40519) Photosystem II 10 kDa polypeptide, chloroplast precursor|
           (PII10)
          Length = 136

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 27/47 (57%), Positives = 30/47 (63%)
 Frame = +2

Query: 2   PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142
           PIY  ++WS SGD Y GGTTGL IWAVT           V+NTSALA
Sbjct: 89  PIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVFNTSALA 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,304,040
Number of Sequences: 219361
Number of extensions: 223104
Number of successful extensions: 435
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)