Clone Name | basdd21 |
---|---|
Clone Library Name | barley_pub |
>PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor| Length = 140 Score = 63.5 bits (153), Expect = 1e-10 Identities = 30/47 (63%), Positives = 32/47 (68%) Frame = +2 Query: 2 PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142 PIY EEW+ +GD YAGGTTGLLIWAVT VYNTSALA Sbjct: 93 PIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGLLAGGALLVYNTSALA 139
>PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor| Length = 138 Score = 62.4 bits (150), Expect = 3e-10 Identities = 29/47 (61%), Positives = 31/47 (65%) Frame = +2 Query: 2 PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142 PIYTPEEWS SGD Y GG TGL +WAVT VY+TSALA Sbjct: 91 PIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILLGGALLVYSTSALA 137
>PSBR_SOLTU (P06183) Photosystem II 10 kDa polypeptide, chloroplast precursor| (Light-inducible tissue-specific ST-LS1 protein) Length = 138 Score = 60.8 bits (146), Expect = 9e-10 Identities = 29/47 (61%), Positives = 30/47 (63%) Frame = +2 Query: 2 PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142 PIY +EWS SGD Y GGTTGL IWAVT VYNTSALA Sbjct: 91 PIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALA 137
>PSBR_LYCES (Q40163) Photosystem II 10 kDa polypeptide, chloroplast precursor| Length = 138 Score = 60.8 bits (146), Expect = 9e-10 Identities = 29/47 (61%), Positives = 30/47 (63%) Frame = +2 Query: 2 PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142 PIY +EWS SGD Y GGTTGL IWAVT VYNTSALA Sbjct: 91 PIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALA 137
>PSBR_BRACM (P49108) Photosystem II 10 kDa polypeptide, chloroplast precursor| Length = 141 Score = 58.9 bits (141), Expect = 3e-09 Identities = 28/47 (59%), Positives = 29/47 (61%) Frame = +2 Query: 2 PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142 PIY +EWS SGD Y GG TGL IWAVT VYNTSALA Sbjct: 94 PIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALA 140
>PSBR_ARATH (P27202) Photosystem II 10 kDa polypeptide, chloroplast precursor| Length = 140 Score = 58.2 bits (139), Expect = 6e-09 Identities = 28/47 (59%), Positives = 28/47 (59%) Frame = +2 Query: 2 PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142 PIY EWS SGD Y GG TGL IWAVT VYNTSALA Sbjct: 93 PIYNENEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALA 139
>PSBR_TOBAC (Q40519) Photosystem II 10 kDa polypeptide, chloroplast precursor| (PII10) Length = 136 Score = 58.2 bits (139), Expect = 6e-09 Identities = 27/47 (57%), Positives = 30/47 (63%) Frame = +2 Query: 2 PIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXXXXXXXVYNTSALA 142 PIY ++WS SGD Y GGTTGL IWAVT V+NTSALA Sbjct: 89 PIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVFNTSALA 135 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,304,040 Number of Sequences: 219361 Number of extensions: 223104 Number of successful extensions: 435 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 435 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)