Clone Name | basdd13 |
---|---|
Clone Library Name | barley_pub |
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 56.6 bits (135), Expect = 6e-08 Identities = 27/29 (93%), Positives = 28/29 (96%) Frame = +1 Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630 MAAP SAIGFEGYEKRLEITF+EASIFAD Sbjct: 1 MAAPVSAIGFEGYEKRLEITFSEASIFAD 29
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 50.4 bits (119), Expect = 4e-06 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +1 Query: 535 TATMAAPTSAIGFEGYEKRLEITFNEASIFAD 630 +A A+P SAIGFEGYEKRLEITF+EA +F D Sbjct: 5 SAADASPVSAIGFEGYEKRLEITFSEAPVFVD 36
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 49.3 bits (116), Expect = 9e-06 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = +1 Query: 553 PTSAIGFEGYEKRLEITFNEASIFAD 630 P SAIGFEGYEKRLEITF+EA +FAD Sbjct: 11 PVSAIGFEGYEKRLEITFSEAPVFAD 36
>DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 357 Score = 48.9 bits (115), Expect = 1e-05 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = +1 Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630 MA P SAIGFEGYEKRLEI+F E+S FAD Sbjct: 1 MALPASAIGFEGYEKRLEISFFESSFFAD 29
>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 47.8 bits (112), Expect = 3e-05 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = +1 Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630 MA TSAIGFEGYEKRLEI+F EA IF+D Sbjct: 1 MALSTSAIGFEGYEKRLEISFFEAGIFSD 29
>DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/29 (72%), Positives = 24/29 (82%) Frame = +1 Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630 MA P SAIGFEG+EKRLEI+F E +FAD Sbjct: 3 MALPVSAIGFEGFEKRLEISFFEPGLFAD 31
>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/29 (75%), Positives = 24/29 (82%) Frame = +1 Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630 MA TSAIGFEGYE RLEI+F EA IF+D Sbjct: 1 MALSTSAIGFEGYENRLEISFFEAGIFSD 29
>DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/28 (71%), Positives = 23/28 (82%) Frame = +1 Query: 547 AAPTSAIGFEGYEKRLEITFNEASIFAD 630 A P SAIGFEG+EKRLEI+F E +FAD Sbjct: 4 ALPVSAIGFEGFEKRLEISFFEPGLFAD 31
>DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 360 Score = 43.5 bits (101), Expect = 5e-04 Identities = 20/29 (68%), Positives = 23/29 (79%) Frame = +1 Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630 M P SAIGFEG+EKRLEI+F E +FAD Sbjct: 3 MDLPVSAIGFEGFEKRLEISFVEPGLFAD 31
>DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 43.1 bits (100), Expect = 7e-04 Identities = 20/29 (68%), Positives = 24/29 (82%) Frame = +1 Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630 M++ SAIGFEG+EKRLEI+F E S FAD Sbjct: 1 MSSEVSAIGFEGFEKRLEISFFEPSFFAD 29
>DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 366 Score = 43.1 bits (100), Expect = 7e-04 Identities = 20/24 (83%), Positives = 21/24 (87%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEGYEKRLE+TF E SIF D Sbjct: 4 SAIGFEGYEKRLEVTFFEPSIFQD 27
>DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = +1 Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630 M P SAIGFEG+EKRLEI+F E +F+D Sbjct: 3 MDLPVSAIGFEGFEKRLEISFVEPGLFSD 31
>DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 363 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/24 (83%), Positives = 21/24 (87%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEG+EKRLEITF E SIF D Sbjct: 4 SAIGFEGFEKRLEITFFEPSIFVD 27
>DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 369 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEGYEKRLE++F E S+F D Sbjct: 4 SAIGFEGYEKRLEVSFFEPSLFVD 27
>DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 362 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEGYEKRLE+TF E +F D Sbjct: 4 SAIGFEGYEKRLEVTFFEPGLFLD 27
>DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzyme 3 (EC| 4.1.1.50) (AdoMetDC 3) (SamDC 3) [Contains: S-adenosylmethionine decarboxylase 3 alpha chain; S-adenosylmethionine decarboxylase 3 beta chain] Length = 367 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEGYEKRLE++F E S F D Sbjct: 4 SAIGFEGYEKRLEVSFFEPSFFQD 27
>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 39.3 bits (90), Expect = 0.010 Identities = 16/24 (66%), Positives = 22/24 (91%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEG+EKRLEI+F++ +F+D Sbjct: 4 SAIGFEGFEKRLEISFSDPGLFSD 27
>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 39.3 bits (90), Expect = 0.010 Identities = 16/24 (66%), Positives = 22/24 (91%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEG+EKRLEI+F++ +F+D Sbjct: 4 SAIGFEGFEKRLEISFSDPGLFSD 27
>DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 377 Score = 39.3 bits (90), Expect = 0.010 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEG+EKRLEI+F E IF D Sbjct: 19 SAIGFEGFEKRLEISFFEPGIFVD 42
>DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 381 Score = 39.3 bits (90), Expect = 0.010 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEG+EKRLEI+F E IF D Sbjct: 28 SAIGFEGFEKRLEISFFEPGIFVD 51
>DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 34.7 bits (78), Expect = 0.24 Identities = 15/17 (88%), Positives = 17/17 (100%) Frame = +1 Query: 556 TSAIGFEGYEKRLEITF 606 TSAIGFEG+EKRLEI+F Sbjct: 2 TSAIGFEGFEKRLEISF 18
>DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 368 Score = 34.3 bits (77), Expect = 0.31 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +1 Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630 SAIGFEG +RLE++F E S+F D Sbjct: 4 SAIGFEGLRERLEVSFFEPSLFLD 27
>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C| Length = 162 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +1 Query: 241 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHIQT 354 AK+ A ++P C +LP TFD E ++S+ L+IQT Sbjct: 66 AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103
>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)| Length = 629 Score = 31.6 bits (70), Expect = 2.0 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -2 Query: 486 NWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSRSLNMQQKTSLRLQLVE 307 NWS + K +GG + NC + GK KAK + + + LN ++ ++L L LV Sbjct: 439 NWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLN-ERNSTLTLALVW 497 Query: 306 RL 301 +L Sbjct: 498 QL 499
>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H| antigen) Length = 2115 Score = 31.6 bits (70), Expect = 2.0 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -2 Query: 537 SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRM--A 364 ++ ++AEQ G E ERL + + Q +E G++E E + L +G+A+ D+ + A Sbjct: 969 AMEREAEQMGNELERLRAALMESQGQQQEERGQQERE---VARLTQERGRAQADLALEKA 1025 Query: 363 SSRSLNMQQKTSLRLQLVE 307 + L M+ + +L Q VE Sbjct: 1026 ARAELEMRLQNALNEQRVE 1044
>RS10_CHLPN (Q9Z803) 30S ribosomal protein S10| Length = 105 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +1 Query: 298 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 426 LK FDQ + RS ++TA+R+ +V PLP + Y +L Sbjct: 12 LKGFDQGQLDRSTADIVETAKRTGARVVGPIPLPTKREVYTVL 54
>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC| 1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde dehydrogenase 2) (NAGSA dehydrogenase 2) Length = 306 Score = 30.0 bits (66), Expect = 5.9 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = +1 Query: 331 SFLLHIQTARRSHPDIVFGFP 393 S LL TA R HPD VFGFP Sbjct: 76 SRLLDASTAHRIHPDWVFGFP 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,301,771 Number of Sequences: 219361 Number of extensions: 1431746 Number of successful extensions: 3909 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3820 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3909 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)