ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdd13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme... 57 6e-08
2DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme... 50 4e-06
3DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme... 49 9e-06
4DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme... 49 1e-05
5DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme... 48 3e-05
6DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme... 46 1e-04
7DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme... 46 1e-04
8DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme... 44 4e-04
9DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme... 44 5e-04
10DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme... 43 7e-04
11DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzym... 43 7e-04
12DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme... 42 0.001
13DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme... 42 0.001
14DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzym... 41 0.003
15DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzym... 41 0.003
16DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzym... 40 0.006
17DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme... 39 0.010
18DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (... 39 0.010
19DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzym... 39 0.010
20DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzym... 39 0.010
21DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme... 35 0.24
22DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzym... 34 0.31
23MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C 32 1.6
24PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific pl... 32 2.0
25NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA p... 32 2.0
26RS10_CHLPN (Q9Z803) 30S ribosomal protein S10 30 5.9
27ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase... 30 5.9

>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 393

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +1

Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           MAAP SAIGFEGYEKRLEITF+EASIFAD
Sbjct: 1   MAAPVSAIGFEGYEKRLEITFSEASIFAD 29



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>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 400

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = +1

Query: 535 TATMAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           +A  A+P SAIGFEGYEKRLEITF+EA +F D
Sbjct: 5   SAADASPVSAIGFEGYEKRLEITFSEAPVFVD 36



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>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 398

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +1

Query: 553 PTSAIGFEGYEKRLEITFNEASIFAD 630
           P SAIGFEGYEKRLEITF+EA +FAD
Sbjct: 11  PVSAIGFEGYEKRLEITFSEAPVFAD 36



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>DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 357

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +1

Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           MA P SAIGFEGYEKRLEI+F E+S FAD
Sbjct: 1   MALPASAIGFEGYEKRLEISFFESSFFAD 29



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>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +1

Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           MA  TSAIGFEGYEKRLEI+F EA IF+D
Sbjct: 1   MALSTSAIGFEGYEKRLEISFFEAGIFSD 29



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>DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +1

Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           MA P SAIGFEG+EKRLEI+F E  +FAD
Sbjct: 3   MALPVSAIGFEGFEKRLEISFFEPGLFAD 31



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>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = +1

Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           MA  TSAIGFEGYE RLEI+F EA IF+D
Sbjct: 1   MALSTSAIGFEGYENRLEISFFEAGIFSD 29



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>DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +1

Query: 547 AAPTSAIGFEGYEKRLEITFNEASIFAD 630
           A P SAIGFEG+EKRLEI+F E  +FAD
Sbjct: 4   ALPVSAIGFEGFEKRLEISFFEPGLFAD 31



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>DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13)
           [Contains: S-adenosylmethionine decarboxylase alpha
           chain; S-adenosylmethionine decarboxylase beta chain]
          Length = 360

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = +1

Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           M  P SAIGFEG+EKRLEI+F E  +FAD
Sbjct: 3   MDLPVSAIGFEGFEKRLEISFVEPGLFAD 31



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>DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +1

Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           M++  SAIGFEG+EKRLEI+F E S FAD
Sbjct: 1   MSSEVSAIGFEGFEKRLEISFFEPSFFAD 29



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>DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 366

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEGYEKRLE+TF E SIF D
Sbjct: 4   SAIGFEGYEKRLEVTFFEPSIFQD 27



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>DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = +1

Query: 544 MAAPTSAIGFEGYEKRLEITFNEASIFAD 630
           M  P SAIGFEG+EKRLEI+F E  +F+D
Sbjct: 3   MDLPVSAIGFEGFEKRLEISFVEPGLFSD 31



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>DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 363

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEG+EKRLEITF E SIF D
Sbjct: 4   SAIGFEGFEKRLEITFFEPSIFVD 27



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>DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 369

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEGYEKRLE++F E S+F D
Sbjct: 4   SAIGFEGYEKRLEVSFFEPSLFVD 27



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>DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 362

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEGYEKRLE+TF E  +F D
Sbjct: 4   SAIGFEGYEKRLEVTFFEPGLFLD 27



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>DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzyme 3 (EC|
           4.1.1.50) (AdoMetDC 3) (SamDC 3) [Contains:
           S-adenosylmethionine decarboxylase 3 alpha chain;
           S-adenosylmethionine decarboxylase 3 beta chain]
          Length = 367

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEGYEKRLE++F E S F D
Sbjct: 4   SAIGFEGYEKRLEVSFFEPSFFQD 27



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>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 353

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 16/24 (66%), Positives = 22/24 (91%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEG+EKRLEI+F++  +F+D
Sbjct: 4   SAIGFEGFEKRLEISFSDPGLFSD 27



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>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 353

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 16/24 (66%), Positives = 22/24 (91%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEG+EKRLEI+F++  +F+D
Sbjct: 4   SAIGFEGFEKRLEISFSDPGLFSD 27



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>DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 377

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEG+EKRLEI+F E  IF D
Sbjct: 19  SAIGFEGFEKRLEISFFEPGIFVD 42



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>DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 381

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEG+EKRLEI+F E  IF D
Sbjct: 28  SAIGFEGFEKRLEISFFEPGIFVD 51



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>DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1

Query: 556 TSAIGFEGYEKRLEITF 606
           TSAIGFEG+EKRLEI+F
Sbjct: 2   TSAIGFEGFEKRLEISF 18



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>DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 368

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 559 SAIGFEGYEKRLEITFNEASIFAD 630
           SAIGFEG  +RLE++F E S+F D
Sbjct: 4   SAIGFEGLRERLEVSFFEPSLFLD 27



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>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C|
          Length = 162

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +1

Query: 241 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHIQT 354
           AK+ A ++P C +LP      TFD  E ++S+ L+IQT
Sbjct: 66  AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103



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>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)|
          Length = 629

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -2

Query: 486 NWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSRSLNMQQKTSLRLQLVE 307
           NWS + K     +GG  +   NC   +  GK KAK  +   + + LN ++ ++L L LV 
Sbjct: 439 NWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLN-ERNSTLTLALVW 497

Query: 306 RL 301
           +L
Sbjct: 498 QL 499



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>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = -2

Query: 537  SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRM--A 364
            ++ ++AEQ G E ERL    +  + Q +E  G++E E   +  L   +G+A+ D+ +  A
Sbjct: 969  AMEREAEQMGNELERLRAALMESQGQQQEERGQQERE---VARLTQERGRAQADLALEKA 1025

Query: 363  SSRSLNMQQKTSLRLQLVE 307
            +   L M+ + +L  Q VE
Sbjct: 1026 ARAELEMRLQNALNEQRVE 1044



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>RS10_CHLPN (Q9Z803) 30S ribosomal protein S10|
          Length = 105

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 298 LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 426
           LK FDQ +  RS    ++TA+R+   +V   PLP   + Y +L
Sbjct: 12  LKGFDQGQLDRSTADIVETAKRTGARVVGPIPLPTKREVYTVL 54



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>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC|
           1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde
           dehydrogenase 2) (NAGSA dehydrogenase 2)
          Length = 306

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +1

Query: 331 SFLLHIQTARRSHPDIVFGFP 393
           S LL   TA R HPD VFGFP
Sbjct: 76  SRLLDASTAHRIHPDWVFGFP 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,301,771
Number of Sequences: 219361
Number of extensions: 1431746
Number of successful extensions: 3909
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3909
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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