Clone Name | basdd12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 918 bits (463), Expect = 0.0 Identities = 463/463 (100%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119464 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 119405 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119404 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 119345 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119344 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119285 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119284 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119225 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119224 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 119165 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119164 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 119105 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119104 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 119045 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119044 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 119002 Score = 918 bits (463), Expect = 0.0 Identities = 463/463 (100%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95430 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 95489 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95490 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 95549 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95550 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 95609 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95610 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 95669 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95670 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 95729 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95730 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 95789 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95790 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 95849 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95850 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 95892
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 118245 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 118186 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118185 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 118126 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118125 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 118066 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118065 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 118006 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118005 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 117946 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117945 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 117886 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117885 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 117826 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117825 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 117783
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119329 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 119270 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119269 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 119210 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119209 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119150 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119149 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119090 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119089 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 119030 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119029 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118970 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118969 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118910 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118909 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 118867 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95827 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 95886 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95887 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 95946 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95947 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 96006 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96007 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96066 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96067 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96126 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96127 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96186 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96187 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96246 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96247 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 96289
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119329 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 119270 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119269 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 119210 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119209 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119150 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119149 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119090 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119089 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 119030 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119029 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118970 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118969 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118910 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118909 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 118867 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95827 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 95886 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95887 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 95946 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95947 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 96006 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96007 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96066 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96067 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96126 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96127 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96186 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96187 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96246 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96247 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 96289
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119278 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 119219 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119218 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 119159 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119158 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119099 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119098 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119039 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119038 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 118979 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118978 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118919 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118918 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118859 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118858 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 118816 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95772 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 95831 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95832 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 95891 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95892 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 95951 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95952 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96011 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96012 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96071 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96072 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96131 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96132 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96191 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96192 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 96234
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 31508405 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 31508464 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508465 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 31508524 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508525 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 31508584 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508585 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 31508644 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508645 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 31508704 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508705 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 31508764 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508765 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 31508824 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508825 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 31508867 Score = 165 bits (83), Expect = 2e-37 Identities = 83/83 (100%) Strand = Plus / Minus Query: 382 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 442 aatgaccgctcagtgataaagga 464 ||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaagga 11513235 Score = 117 bits (59), Expect = 3e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 398 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 457 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 458 taaagga 464 ||||||| Sbjct: 25722118 taaagga 25722112 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 401 gtcgagagggaaacagcccggatcaccagctaaggccc 438 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 300 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 354 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 84191 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 84132 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84131 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 84072 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84071 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 84012 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84011 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 83952 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83951 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 83892 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83891 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 83832 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83831 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 83772 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83771 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 83729
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119298 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 119239 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119238 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 119179 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119178 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119119 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119118 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119059 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119058 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 118999 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118998 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118939 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118938 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118879 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118878 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 118836 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95820 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 95879 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95880 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 95939 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95940 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 95999 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96000 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96059 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96060 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96119 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96120 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96179 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96180 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96239 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96240 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 96282
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 14594 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 14653 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14654 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 14713 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14714 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 14773 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14774 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 14833 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14834 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 14893 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14894 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 14953 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14954 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 15013 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15014 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 15056 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 122869 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 122928 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 122929 agggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaa 122987 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122988 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 123047 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123048 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 123107 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123108 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 123167 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123168 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 123227 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123228 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 123287 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123288 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 123330
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141402 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 141461 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141462 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 141521 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141522 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 141581 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141582 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 141641 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141642 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 141701 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141702 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 141761 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141762 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 141821 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141822 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 141864
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 93998 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 94057 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94058 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 94117 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94118 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 94177 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94178 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 94237 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94238 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 94297 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94298 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 94357 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94358 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 94417 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94418 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 94460
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 58017 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 57958 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57957 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 57898 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57897 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 57838 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57837 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 57778 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57777 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 57718 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57717 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 57658 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57657 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 57598 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57597 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 57555
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 28062 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 28121 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28122 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 28181 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28182 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 28241 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28242 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 28301 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28302 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 28361 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28362 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 28421 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28422 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 28481 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28482 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 28524
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9268754 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 9268813 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268814 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 9268873 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268874 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 9268933 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268934 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9268993 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268994 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9269053 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269054 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9269113 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269114 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9269173 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269174 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 9269216 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9056668 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 9056727 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056728 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 9056787 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056788 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 9056847 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056848 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9056907 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056908 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9056967 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056968 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9057027 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057028 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9057087 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057088 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 9057130 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9228254 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 9228313 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9228314 agggcgattgtcactgcttatggacccgaacctaggtgatctatccatgaccaggatgaa 9228373 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228374 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 9228433 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228434 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9228493 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228494 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9228553 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228554 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9228613 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228614 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9228673 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228674 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 9228716 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9164843 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 9164902 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 9164903 agggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaa 9164961 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164962 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 9165021 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165022 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9165081 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165082 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9165141 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165142 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9165201 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165202 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9165261 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165262 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 9165304
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 19938739 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 19938798 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938799 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 19938858 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938859 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 19938918 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938919 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 19938978 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938979 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 19939038 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939039 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 19939098 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939099 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 19939158 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939159 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 19939201 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10387606 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 10387665 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387666 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 10387725 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387726 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 10387785 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387786 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 10387845 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387846 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 10387905 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387906 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 10387965 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387966 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 10388025 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388026 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 10388068 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10276692 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 10276633 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276632 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 10276573 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276572 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 10276513 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276512 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 10276453 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276452 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 10276393 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276392 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 10276333 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276332 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 10276273 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276272 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 10276230 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 307 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 366 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 367 tcggccagtgagacgatgggggataagcttcatcgtcgagag 408 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 31598921 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 31598980 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598981 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 31599040 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599041 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 31599100 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599101 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 31599160 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599161 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 31599220 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599221 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 31599280 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599281 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 31599340 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599341 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 31599383 Score = 165 bits (83), Expect = 2e-37 Identities = 83/83 (100%) Strand = Plus / Minus Query: 382 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 442 aatgaccgctcagtgataaagga 464 ||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaagga 11509998 Score = 117 bits (59), Expect = 3e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 398 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 457 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 458 taaagga 464 ||||||| Sbjct: 25813427 taaagga 25813421 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 401 gtcgagagggaaacagcccggatcaccagctaaggccc 438 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 300 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 354 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 33526237 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 33526296 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526297 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 33526356 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526357 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 33526416 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526417 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 33526476 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526477 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 33526536 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526537 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 33526596 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526597 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 33526656 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526657 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 33526699 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Plus Query: 391 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 450 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 451 tcagtgataaagga 464 |||||||||||||| Sbjct: 527811 tcagtgataaagga 527824 Score = 83.8 bits (42), Expect = 5e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgta 43 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677967 ggcagtggcttggttaagggaacggaacccaccggagccgta 16677926
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 47304 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 47245 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47244 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 47185 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47184 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 47125 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47124 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 47065 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47064 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 47005 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47004 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 46945 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46944 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 46885 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46884 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 46842
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 71434 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 71493 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71494 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 71553 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71554 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 71613 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71614 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 71673 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71674 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 71733 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71734 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 71793 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71794 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 71853 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71854 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 71896
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 206 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 265 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 325 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 385 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 445 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 505 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 565 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 625 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 668
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 401 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 460 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 520 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 580 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 640 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 700 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 760 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 820 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 863
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 513 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 572 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 632 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 692 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 752 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 812 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 872 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 932 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 975
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 272 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 331 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 391 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 451 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 511 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 571 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 631 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 691 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 734
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 403 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 462 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 522 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 582 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 642 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 702 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 762 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 822 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 865
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 22 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 81 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 141 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 201 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 261 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 321 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 381 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 441 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 484
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 222 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 281 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 341 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 401 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 461 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 521 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 581 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 641 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 684
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 401 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 460 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 520 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 580 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 640 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 700 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 760 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 820 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 863
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 403 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 462 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 522 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 582 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 642 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 702 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 762 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 822 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 865
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 24 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 83 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 143 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 203 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 263 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 323 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 383 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 443 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 486
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 19950015 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 19950074 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950075 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 19950134 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950135 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 19950194 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950195 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 19950254 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950255 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 19950314 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950315 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 19950374 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950375 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 19950434 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950435 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 19950477 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10393645 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 10393704 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393705 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 10393764 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393765 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 10393824 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393825 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 10393884 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393885 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 10393944 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393945 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 10394004 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394005 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 10394064 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394065 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 10394107 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10282731 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 10282672 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282671 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 10282612 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282611 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 10282552 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282551 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 10282492 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282491 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 10282432 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282431 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 10282372 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282371 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 10282312 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282311 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 10282269 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 307 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 366 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 367 tcggccagtgagacgatgggggataagcttcatcgtcgagag 408 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119272 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 119213 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119212 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 119153 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119152 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119093 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119033 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 118973 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118913 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118853 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118852 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 118810 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95767 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 95826 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95827 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 95886 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95887 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 95946 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95947 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96006 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96007 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96066 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96067 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96126 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96127 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96186 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96187 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 96229
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 20829 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 20888 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20889 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 20948 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20949 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 21008 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21009 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 21068 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21069 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 21128 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21129 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 21188 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21189 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 21248 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21249 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 21291 Score = 864 bits (436), Expect = 0.0 Identities = 458/464 (98%), Gaps = 1/464 (0%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| || Sbjct: 44289 ggcagtggcttggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttcat 44230 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44229 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 44170 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44169 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 44110 Query: 182 tgtggttaggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatgcg 240 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 44109 tgtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatgcg 44050 Query: 241 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44049 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 43990 Query: 301 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43989 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 43930 Query: 361 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43929 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 43870 Query: 421 gatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43869 gatcaccagctaaggcccctaaatgaccgctcagtgataaagga 43826
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 918 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 859 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 799 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 739 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 679 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 619 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 559 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 499 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 456
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9241527 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 9241468 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241467 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 9241408 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9241407 gcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagt 9241348 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241347 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9241288 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241287 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9241228 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241227 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9241168 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241167 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9241108 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241107 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 9241065 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 272 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 331 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 332 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 391 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 392 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 437 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 426 ccagctaaggcccctaaatgaccgctcagtgataaa 461 ||||||||| || ||||||||||||| ||| ||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaa 3580350 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 123128 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 123069 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123068 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 123009 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123008 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 122949 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122948 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 122889 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122888 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 122829 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122828 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 122769 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122768 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 122709 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122708 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 122666 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 99709 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 99768 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99769 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 99828 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99829 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 99888 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99889 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 99948 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99949 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 100008 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100009 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 100068 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100069 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 100128 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100129 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 100171
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 52740 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 52681 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52680 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 52621 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 52620 gcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagt 52561 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52560 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 52501 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52500 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 52441 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52440 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 52381 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52380 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 52321 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52320 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 52278
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 123845 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 123786 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123785 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 123726 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123725 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 123666 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123665 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 123606 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123605 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 123546 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123545 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 123486 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123485 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 123426 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123425 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 123383 Score = 902 bits (455), Expect = 0.0 Identities = 461/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 100386 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 100445 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100446 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 100505 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100506 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 100565 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100566 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 100625 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100626 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 100685 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100686 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 100745 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100746 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 100805 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100806 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 100848
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 894 bits (451), Expect = 0.0 Identities = 460/463 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 400 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 459 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 519 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 579 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 639 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 699 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 759 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 819 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 820 atcaccagctaaggcccctaaatgaccgctcagtgatagagga 862
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 886 bits (447), Expect = 0.0 Identities = 450/451 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 398 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 457 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 517 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 577 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 637 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 697 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 757 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 817 Query: 422 atcaccagctaaggcccctaaatgaccgctc 452 ||||||||||||||||||||||||||||||| Sbjct: 818 atcaccagctaaggcccctaaatgaccgctc 848
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 878 bits (443), Expect = 0.0 Identities = 459/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 123068 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 123009 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123008 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 122949 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122948 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 122889 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122888 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 122829 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122828 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgc 122770 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122769 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 122710 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122709 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 122650 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122649 atcaccagctaaggccccttaatgaccgctcagtgataaagga 122607 Score = 878 bits (443), Expect = 0.0 Identities = 459/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 99669 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 99728 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99729 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 99788 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99789 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 99848 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99849 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 99908 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99909 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgc 99967 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99968 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 100027 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100028 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 100087 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 100088 atcaccagctaaggccccttaatgaccgctcagtgataaagga 100130
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 878 bits (443), Expect = 0.0 Identities = 459/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 6022 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 6081 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6082 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 6141 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6142 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 6201 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6202 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 6261 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 6262 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgc 6320 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6321 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 6380 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6381 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 6440 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6441 atcaccagctaaggccccttaatgaccgctcagtgataaagga 6483
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 878 bits (443), Expect = 0.0 Identities = 459/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 610 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 669 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 729 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 789 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 849 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 850 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgc 908 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 968 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 1028 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1029 atcaccagctaaggccccttaatgaccgctcagtgataaagga 1071
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 858 bits (433), Expect = 0.0 Identities = 436/437 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 606 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcat 665 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 725 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 785 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 845 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 905 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 965 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 1025 Query: 422 atcaccagctaaggccc 438 ||||||||||||||||| Sbjct: 1026 atcaccagctaaggccc 1042
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 839 bits (423), Expect = 0.0 Identities = 450/459 (98%) Strand = Plus / Minus Query: 6 gtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaataggg 65 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122604 gtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcataggg 122545 Query: 66 cgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122544 cgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 122485 Query: 126 ggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 185 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122484 ggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtg 122425 Query: 186 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122424 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 122365 Query: 246 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122364 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 122305 Query: 306 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 365 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 122304 ggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaa 122245 Query: 366 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 425 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122244 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatca 122185 Query: 426 ccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||| |||||||||| Sbjct: 122184 ccagctaaggcccctaaatgaccgctcaatgataaagga 122146
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 839 bits (423), Expect = 0.0 Identities = 450/459 (98%) Strand = Plus / Minus Query: 6 gtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaataggg 65 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12825145 gtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcataggg 12825086 Query: 66 cgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825085 cgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 12825026 Query: 126 ggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 185 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 12825025 ggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtg 12824966 Query: 186 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824965 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 12824906 Query: 246 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824905 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 12824846 Query: 306 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 365 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 12824845 ggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaa 12824786 Query: 366 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 425 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12824785 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatca 12824726 Query: 426 ccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||| |||||||||| Sbjct: 12824725 ccagctaaggcccctaaatgaccgctcaatgataaagga 12824687
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 807 bits (407), Expect = 0.0 Identities = 449/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 131064 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 131010 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131009 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 130950 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 130949 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 130890 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130889 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 130830 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 130829 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 130770 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 130769 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 130710 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130709 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 130650 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130649 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 130607 Score = 807 bits (407), Expect = 0.0 Identities = 449/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 103571 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 103625 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103626 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 103685 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103686 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 103745 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103746 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 103805 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 103806 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 103865 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 103866 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 103925 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103926 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 103985 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103986 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 104028
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 807 bits (407), Expect = 0.0 Identities = 449/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 141504 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 141450 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141449 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 141390 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141389 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 141330 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141329 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 141270 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141269 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 141210 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 141209 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggt 141150 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141149 aaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 141090 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141089 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 141047 Score = 807 bits (407), Expect = 0.0 Identities = 449/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 112153 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 112207 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112208 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 112267 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 112268 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 112327 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112328 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 112387 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 112388 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 112447 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112448 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggt 112507 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112508 aaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 112567 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112568 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 112610
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 807 bits (407), Expect = 0.0 Identities = 449/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 604 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 658 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 718 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 778 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 838 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 839 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 898 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 899 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 958 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 1018 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 1061
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 138901 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 138847 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138846 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 138787 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138786 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 138727 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138726 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 138667 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138666 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 138607 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 138606 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 138547 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138546 cgaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 138487 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138486 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 138444 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 110196 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 110250 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110251 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 110310 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110311 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 110370 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110371 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 110430 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110431 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 110490 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110491 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 110550 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110551 cgaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 110610 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110611 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 110653
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 132172 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 132118 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132117 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 132058 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132057 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 131998 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131997 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 131938 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131937 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 131878 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131877 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 131818 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131817 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 131758 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131757 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 131715 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 104706 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 104760 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104761 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 104820 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104821 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 104880 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104881 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 104940 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104941 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 105000 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105001 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 105060 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105061 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 105120 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105121 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 105163
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 131188 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 131134 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131133 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 131074 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131073 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 131014 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131013 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 130954 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 130953 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 130894 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 130893 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggt 130834 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130833 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 130774 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130773 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 130731 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 102257 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 102311 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102312 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 102371 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102372 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 102431 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102432 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 102491 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 102492 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 102551 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 102552 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggt 102611 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102612 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 102671 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102672 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 102714
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 136335 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 136281 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136280 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 136221 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136220 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 136161 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136160 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 136101 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136100 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 136041 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136040 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 135981 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135980 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 135921 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135920 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 135878 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 107222 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 107276 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107277 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 107336 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107337 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 107396 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107397 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 107456 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107457 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 107516 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107517 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 107576 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107577 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 107636 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107637 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 107679
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 134943 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 134889 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134888 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 134829 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134828 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 134769 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134768 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 134709 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134708 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 134649 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 134648 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 134589 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134588 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 134529 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134528 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 134486 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106093 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106147 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106148 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106207 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106208 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106267 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106268 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106327 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106328 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 106387 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106388 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 106447 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106448 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 106507 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106508 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 106550
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 135989 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 135935 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135934 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 135875 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135874 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 135815 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135814 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 135755 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135754 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 135695 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135694 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 135635 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135634 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 135575 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135574 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 135532 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106436 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106490 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106491 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106550 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106551 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106610 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106611 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106670 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106671 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 106730 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106731 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 106790 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106791 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 106850 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106851 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 106893
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 135078 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 135024 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135023 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 134964 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134963 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 134904 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134903 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 134844 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134843 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 134784 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 134783 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 134724 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134723 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 134664 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134663 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 134621 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106265 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106319 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106320 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106379 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106380 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106439 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106440 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106499 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106500 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 106559 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106560 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 106619 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106620 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 106679 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106680 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 106722
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 135076 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 135022 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135021 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 134962 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134961 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 134902 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134901 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 134842 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134841 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 134782 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 134781 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 134722 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134721 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 134662 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134661 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 134619 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106262 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106316 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106317 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106376 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106377 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106436 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106437 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106496 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106497 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 106556 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106557 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 106616 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106617 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 106676 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106677 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 106719
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 134988 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 134934 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134933 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 134874 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134873 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 134814 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134813 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 134754 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134753 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 134694 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 134693 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 134634 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134633 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 134574 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134573 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 134531 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106140 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106194 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106195 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106254 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106255 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106314 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106315 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106374 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106375 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 106434 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106435 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 106494 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106495 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 106554 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106555 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 106597
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 799 bits (403), Expect = 0.0 Identities = 449/463 (96%), Gaps = 6/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 133619 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 133565 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133564 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 133505 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133504 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 133445 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133444 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 133385 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 133384 tgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcga 133325 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 133324 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggt 133266 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133265 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 133206 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133205 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 133163 Score = 799 bits (403), Expect = 0.0 Identities = 449/463 (96%), Gaps = 6/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 104352 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 104406 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104407 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 104466 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104467 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 104526 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104527 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 104586 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 104587 tgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcga 104646 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 104647 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggt 104705 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104706 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 104765 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104766 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 104808
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 132165 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 132111 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132110 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 132051 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132050 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 131991 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131990 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 131931 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131930 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 131871 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131870 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 131811 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131810 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 131751 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131750 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 131708 Score = 799 bits (403), Expect = 0.0 Identities = 448/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 104704 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 104758 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104759 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 104818 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104819 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 104878 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104879 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 104938 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104939 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 104998 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104999 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 105058 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105059 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 105118 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105119 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 105161
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 793 bits (400), Expect = 0.0 Identities = 445/460 (96%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 5 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 64 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 603 agtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagg 657 Query: 65 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 124 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 717 Query: 125 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 184 ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 tgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 777 Query: 185 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 837 Query: 245 ggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 838 ggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagag 897 Query: 305 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 364 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 898 cggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaa 957 Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 1017 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||| Sbjct: 1018 accagctaaggcccctaaatgaccgctcagtgataaagga 1057
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 135697 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 135643 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135642 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 135583 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135582 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 135523 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135522 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 135463 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135462 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 135403 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135402 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 135343 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135342 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 135283 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135282 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 135240 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106933 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106987 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106988 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 107047 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107048 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 107107 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107108 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 107167 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107168 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 107227 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107228 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 107287 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107288 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 107347 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107348 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 107390
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 135298 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 135244 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135243 ggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 135184 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135183 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 135124 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135123 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 135064 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135063 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 135004 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 135003 gagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggt 134944 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 134884 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134883 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 134841 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106608 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106662 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106663 ggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106722 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106723 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106782 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106783 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106842 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106843 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 106902 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 106903 gagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggt 106962 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 107022 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 107065
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 142276 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 142222 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142221 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 142162 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142161 gcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagt 142102 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 142101 tgtggttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaatgcgt 142042 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 142041 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 141982 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 141981 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 141922 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 141921 caaggtcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccgg 141862 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 141861 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 141819 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 111052 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 111106 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111107 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 111166 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111167 gcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagt 111226 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 111227 tgtggttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaatgcgt 111286 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111287 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 111346 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 111347 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 111406 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111407 caaggtcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccgg 111466 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 111467 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 111509
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 2127 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 2181 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2182 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 2241 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2242 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 2301 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2302 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 2361 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2362 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 2421 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2422 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 2481 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2482 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 2541 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2542 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 2584
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 135577 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 135523 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135522 ggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 135463 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135462 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 135403 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135402 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 135343 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135342 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 135283 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 135282 gagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggt 135223 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135222 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 135163 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135162 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 135120 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106830 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106884 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106885 ggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106944 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106945 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 107004 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107005 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 107064 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107065 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 107124 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 107125 gagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggt 107184 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107185 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 107244 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107245 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 107287
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 135695 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 135641 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135640 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 135581 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135580 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 135521 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135520 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 135461 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135460 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 135401 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135400 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 135341 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 135281 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135280 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 135238 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106931 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106985 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106986 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 107045 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107046 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 107105 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107106 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 107165 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107166 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 107225 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107226 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 107285 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107286 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 107345 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107346 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 107388
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 135426 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 135372 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135371 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 135312 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135311 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 135252 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135251 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 135192 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135191 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 135132 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135131 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 135072 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135071 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 135012 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135011 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 134969 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106712 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106766 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106767 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106826 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106827 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106886 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106887 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106946 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106947 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 107006 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107007 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 107066 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107067 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 107126 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107127 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 107169
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 139106 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 139052 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139051 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 138992 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138991 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 138932 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138931 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 138872 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138871 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 138812 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 138811 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataataggggt 138752 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138751 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 138692 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138691 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 138649 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 110193 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 110247 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110248 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 110307 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110308 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 110367 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110368 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 110427 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110428 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 110487 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 110488 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataataggggt 110547 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110548 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 110607 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110608 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 110650
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 134955 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 134901 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134900 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 134841 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134840 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 134781 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134780 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 134721 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134720 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 134661 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 134660 gagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggt 134601 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134600 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 134541 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134540 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 134498 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 106107 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 106161 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106162 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106221 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106222 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106281 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106282 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106341 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106342 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 106401 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 106402 gagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggt 106461 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106462 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 106521 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106522 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 106564
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 791 bits (399), Expect = 0.0 Identities = 447/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 700 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 754 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 814 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 874 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 934 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 935 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 994 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 995 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 1054 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 caaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 1114 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1115 atcaccagctaaggcccctaaatgatcgctcagtgataaagga 1157
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 789 bits (398), Expect = 0.0 Identities = 446/462 (96%), Gaps = 5/462 (1%) Strand = Plus / Plus Query: 3 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 62 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 610 gcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcata 664 Query: 63 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 122 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 724 Query: 123 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 182 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 784 Query: 183 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 844 Query: 243 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 845 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 904 Query: 303 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 362 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 905 agcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtc 964 Query: 363 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 422 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 965 aaggtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccgga 1024 Query: 423 tcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1025 tcaccagctaaggcccctaaatgaccgctcagtgataaagga 1066
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 787 bits (397), Expect = 0.0 Identities = 446/462 (96%), Gaps = 4/462 (0%) Strand = Plus / Plus Query: 3 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 62 |||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 623 gcagtggcttggttaacgg----gaacccaccggagccgtagcgaaagcgagtcttcgta 678 Query: 63 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 122 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 738 Query: 123 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 182 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 cttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagtt 798 Query: 183 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 858 Query: 243 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 859 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 918 Query: 303 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 362 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 919 agcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtt 978 Query: 363 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 979 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 1038 Query: 423 tcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1039 tcaccagctaaggcccctaaatgaccgctcagtgataaagga 1080
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 785 bits (396), Expect = 0.0 Identities = 429/440 (97%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 265 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 324 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 325 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 384 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 385 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 445 gaccgctcagtgataaagga 464 |||||| ||||||||||||| Sbjct: 1022 gaccgcccagtgataaagga 1041
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 777 bits (392), Expect = 0.0 Identities = 449/468 (95%), Gaps = 10/468 (2%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 138982 ggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttcat 138928 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138927 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 138868 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138867 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 138808 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138807 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 138748 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138747 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 138688 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataaca 356 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138687 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataaca 138628 Query: 357 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138627 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 138568 Query: 417 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138567 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 138520 Score = 777 bits (392), Expect = 0.0 Identities = 449/468 (95%), Gaps = 10/468 (2%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 110963 ggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcttcat 111017 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111018 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 111077 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111078 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 111137 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111138 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 111197 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111198 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 111257 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataaca 356 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111258 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataaca 111317 Query: 357 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111318 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 111377 Query: 417 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111378 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 111425
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 775 bits (391), Expect = 0.0 Identities = 445/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 602 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 656 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 657 agggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaa 716 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 717 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 776 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 836 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 837 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 896 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 897 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggt 956 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 957 caaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccgg 1016 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 1059
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 775 bits (391), Expect = 0.0 Identities = 445/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 132395 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 132341 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132340 agggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaa 132281 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132280 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 132221 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132220 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 132161 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 132160 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 132101 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 132100 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggt 132041 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 132040 caaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccgg 131981 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131980 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 131938 Score = 775 bits (391), Expect = 0.0 Identities = 445/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 104369 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 104423 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104424 agggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaa 104483 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104484 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 104543 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104544 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 104603 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104604 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 104663 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 104664 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggt 104723 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 104724 caaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccgg 104783 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104784 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 104826
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 775 bits (391), Expect = 0.0 Identities = 445/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 131264 ggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcac 131210 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131209 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 131150 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131149 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 131090 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131089 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 131030 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 131029 tgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcga 130970 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 130969 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggt 130910 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130909 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 130850 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130849 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 130807 Score = 775 bits (391), Expect = 0.0 Identities = 445/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 104130 ggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcac 104184 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104185 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 104244 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104245 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 104304 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104305 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 104364 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 104365 tgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcga 104424 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 104425 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggt 104484 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104485 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 104544 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104545 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 104587
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 775 bits (391), Expect = 0.0 Identities = 445/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 133356 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 133302 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133301 agggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaa 133242 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133241 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 133182 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133181 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 133122 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133121 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 133062 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 133061 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggt 133002 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 133001 caaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccgg 132942 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132941 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 132899 Score = 775 bits (391), Expect = 0.0 Identities = 445/463 (96%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 105293 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 105347 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105348 agggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccaggatgaa 105407 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105408 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 105467 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105468 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 105527 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105528 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 105587 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 105588 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggt 105647 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105648 caaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccgg 105707 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105708 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 105750
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 773 bits (390), Expect = 0.0 Identities = 445/463 (96%), Gaps = 9/463 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||| |||||||||||||||||||||| || Sbjct: 127260 ggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcat 127206 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127205 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 127146 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127145 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 127086 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127085 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 127026 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127025 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 126966 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 126965 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggggt 126910 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126909 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 126850 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126849 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 126807 Score = 773 bits (390), Expect = 0.0 Identities = 445/463 (96%), Gaps = 9/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||| |||||||||||||||||||||| || Sbjct: 107662 ggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcat 107716 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107717 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 107776 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107777 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 107836 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107837 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 107896 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107897 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 107956 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 107957 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacaggggt 108012 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108013 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 108072 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108073 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 108115
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 769 bits (388), Expect = 0.0 Identities = 446/464 (96%), Gaps = 6/464 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 1098 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 1152 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 1212 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1213 gcttgggtgaaactaagtgagggtccgaaccgactgatgttgaagaatcagcggatgagt 1272 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1273 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 1332 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1333 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 1392 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1393 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggt 1452 Query: 362 caaggtcggccagtgagacgat-gggggataagcttcatcgtcgagagggaaacagcccg 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1453 caaggtcggccagtgagacgatggggggataagcttcatcgtcgagagggaaacagcccg 1512 Query: 421 gatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1513 gatcaccagctaaggcccctaaatgaccgctcagtgataaagga 1556
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 767 bits (387), Expect = 0.0 Identities = 444/463 (95%), Gaps = 5/463 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 611 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcgt 665 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 666 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgga 725 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 785 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 845 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 846 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 905 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 906 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggt 965 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 966 taaggtcggccagtgagacaatgggggataagcttcatcgtcgagagggaaacagcccgg 1025 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1026 atcaccagctaaggcccctaaatgaccgctcaatgataaagga 1068
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 761 bits (384), Expect = 0.0 Identities = 441/460 (95%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 5 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 64 ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| Sbjct: 625 agtggcttggttaag-----ggaacccaacggagccgtagcgaaagcgagtcttcgtagg 679 Query: 65 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 124 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 gcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 739 Query: 125 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 184 ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 tgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 799 Query: 185 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 859 Query: 245 ggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 860 ggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagag 919 Query: 305 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 364 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 920 cggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaa 979 Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 980 ggtcggccagtgagaccatgggggataagcttcatcgtccagagggaaacagcccggatc 1039 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||| Sbjct: 1040 accagctaaggcccctaaatgaccgctcagtgataaagga 1079
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 755 bits (381), Expect = 0.0 Identities = 442/463 (95%), Gaps = 12/463 (2%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 134381 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 134327 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134326 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 134267 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134266 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 134207 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134206 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 134147 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134146 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 134087 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||| || ||| |||| Sbjct: 134086 gagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------gggt 134034 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134033 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 133974 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133973 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 133931 Score = 755 bits (381), Expect = 0.0 Identities = 442/463 (95%), Gaps = 12/463 (2%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 105901 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 105955 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105956 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 106015 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106016 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 106075 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106076 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 106135 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106136 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 106195 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||| || ||| |||| Sbjct: 106196 gagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------gggt 106248 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106249 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 106308 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106309 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 106351
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 755 bits (381), Expect = 0.0 Identities = 447/465 (96%), Gaps = 8/465 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 2371 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 2425 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2426 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 2485 Query: 122 gcttggatgaaactaagcagagg-tccgaaccgactgatgttgaagaatcagcggatgag 180 |||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 2486 gcttgggtgaaactaagtggagggtccgaaccgactgatgttgaagaatcagcggatgag 2545 Query: 181 ttgtggttaggggtgaaatg-ccactcgaacccagagctagctggttctccccgaaatgc 239 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2546 ttgtggttaggggtgaaatggccactcgaacccagagctagctggttctccccgaaatgc 2605 Query: 240 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgc 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2606 gttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgc 2665 Query: 300 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggg 359 | ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 2666 gagagcggtaccaaatcgaggcaaactctgaatactagatatgactc-aaaataacaggg 2724 Query: 360 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 419 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2725 gtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagtcc 2784 Query: 420 ggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2785 ggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 2829
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 753 bits (380), Expect = 0.0 Identities = 425/440 (96%) Strand = Plus / Minus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 129909 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 129850 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 129849 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 129790 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129789 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 129730 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 129729 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggac 129670 Query: 265 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 324 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 129669 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 129610 Query: 325 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 384 ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| Sbjct: 129609 ctctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatg 129550 Query: 385 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 444 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 129549 agggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaat 129490 Query: 445 gaccgctcagtgataaagga 464 |||||||||||||||||||| Sbjct: 129489 gaccgctcagtgataaagga 129470 Score = 753 bits (380), Expect = 0.0 Identities = 425/440 (96%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 102547 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 102606 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 102607 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 102666 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102667 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 102726 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 102727 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggac 102786 Query: 265 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 324 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 102787 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 102846 Query: 325 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 384 ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| Sbjct: 102847 ctctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatg 102906 Query: 385 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 444 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 102907 agggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaat 102966 Query: 445 gaccgctcagtgataaagga 464 |||||||||||||||||||| Sbjct: 102967 gaccgctcagtgataaagga 102986
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 747 bits (377), Expect = 0.0 Identities = 441/461 (95%), Gaps = 6/461 (1%) Strand = Plus / Plus Query: 5 agtggcttggttaagggaacggaacccaccgg-agccgtagcgaaagcgagtcttaatag 63 ||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| Sbjct: 625 agtggcttggttaag-----ggaacccaccggaagccgtagcgaaagcgagtcttcgtag 679 Query: 64 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 123 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 ggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 739 Query: 124 ttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 183 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttg 799 Query: 184 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 tggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttg 859 Query: 244 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 303 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || Sbjct: 860 aggcgcagcagttgactggacatctaagggtaaagcactgtttcggtgcgggccgcgaga 919 Query: 304 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 363 ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| | Sbjct: 920 gcggtaccaaatcgaggcaaactctgaatactaaatatgacctcaaaataacaggggtta 979 Query: 364 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 423 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 980 aggtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggat 1039 Query: 424 caccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1040 caccagctaaggcccctaaatgaccgctcagtgataaagga 1080
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 731 bits (369), Expect = 0.0 Identities = 439/463 (94%), Gaps = 12/463 (2%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 88 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 142 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 202 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 262 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 322 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 323 tgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 382 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||| || || |||| ||| Sbjct: 383 gagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggt 435 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 495 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 538
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 731 bits (369), Expect = 0.0 Identities = 439/463 (94%), Gaps = 12/463 (2%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 139757 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 139703 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139702 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 139643 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139642 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 139583 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139582 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 139523 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139522 tgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 139463 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||| || || |||| ||| Sbjct: 139462 gagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggt 139410 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139409 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 139350 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139349 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 139307 Score = 731 bits (369), Expect = 0.0 Identities = 439/463 (94%), Gaps = 12/463 (2%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 110303 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 110357 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110358 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 110417 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110418 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 110477 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110478 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 110537 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110538 tgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 110597 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||| || || |||| ||| Sbjct: 110598 gagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggt 110650 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110651 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 110710 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110711 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 110753
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 728 bits (367), Expect = 0.0 Identities = 373/375 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 375 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 316 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 256 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 196 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 136 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 76 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 16 Query: 362 caaggtcggccagtg 376 ||||||||||||||| Sbjct: 15 caaggtcggccagtg 1
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 724 bits (365), Expect = 0.0 Identities = 438/463 (94%), Gaps = 12/463 (2%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 104 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 158 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 218 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 278 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 279 tgtggttaggggtgaaatgccgctcgaacccagagctagctggttctccccgaaatgcgt 338 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 339 tgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 398 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||| || || |||| ||| Sbjct: 399 gagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggt 451 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 511 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 554
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 722 bits (364), Expect = 0.0 Identities = 438/463 (94%), Gaps = 11/463 (2%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 623 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcgt 677 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 737 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 797 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 857 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 858 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 917 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||| ||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 918 gagcagtaccaaatcgaggcaaactctgaatactagatatgacc------tcacaggggt 971 Query: 362 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 421 ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 972 taaggtcggccaatgagacgatgggggataagcttcatcttccagagggaaacagcccgg 1031 Query: 422 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 atcaccagctaaggcccctaaatgaccgctcagtgataaagga 1074
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 722 bits (364), Expect = 0.0 Identities = 441/464 (95%), Gaps = 7/464 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 177447 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 177501 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177502 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 177561 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 177562 gcttgggtgaaactaagtggaggtccga-ccgactgatgttgaagaatcagcgggtgagt 177620 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 177621 tgtggttaggggtgaaatgccactcgcacccagagctagctggttctccccgaaatgcgt 177680 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 177681 tgaggcgcagcagttgactggacatctaggggtaaagcacggtttcggtgcgggccgcga 177740 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca-gggg 360 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| Sbjct: 177741 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataagaggggg 177800 Query: 361 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 420 |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 177801 gcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaagagcccg 177860 Query: 421 gatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177861 gatcaccagctaaggcccctaaatgaccgctcagtgataaagga 177904 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 433 aggcccctaaatgaccgctcag 454 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 gtcgagagggaaacagcccggatc 424 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 gtcgagagggaaacagcccggatc 424 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 720 bits (363), Expect = 0.0 Identities = 444/467 (95%), Gaps = 8/467 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtcttaa 60 ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| | Sbjct: 615 ggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtcttca 670 Query: 61 tagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccaggat 118 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 671 tagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccaggat 730 Query: 119 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 178 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 731 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 790 Query: 179 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaaat 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 791 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaaat 850 Query: 238 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 297 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggcc 910 Query: 298 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 357 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 911 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataacaa 970 Query: 358 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 417 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 gggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 1030 Query: 418 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 || ||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1031 cctgatcacccgctaaggcccctaaatgatcgctcagtgataaagga 1077
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 716 bits (361), Expect = 0.0 Identities = 422/441 (95%), Gaps = 1/441 (0%) Strand = Plus / Minus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||| |||||||||||||| || ||||||| ||||||||||||||||| Sbjct: 52065 ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatgg 52006 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 52005 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 51946 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51945 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 51886 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51885 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 51826 Query: 265 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 324 ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||| Sbjct: 51825 atctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaa 51766 Query: 325 ctctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 383 ||||||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||| Sbjct: 51765 ctctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgat 51706 Query: 384 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 443 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51705 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaat 51646 Query: 444 tgaccgctcagtgataaagga 464 ||| ||||||||||||||||| Sbjct: 51645 tgatcgctcagtgataaagga 51625 Score = 716 bits (361), Expect = 0.0 Identities = 422/441 (95%), Gaps = 1/441 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||| |||||||||||||| || ||||||| ||||||||||||||||| Sbjct: 37763 ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatgg 37822 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 37823 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 37882 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37883 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 37942 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37943 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 38002 Query: 265 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 324 ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||| Sbjct: 38003 atctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaa 38062 Query: 325 ctctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 383 ||||||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||| Sbjct: 38063 ctctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgat 38122 Query: 384 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 443 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38123 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaat 38182 Query: 444 tgaccgctcagtgataaagga 464 ||| ||||||||||||||||| Sbjct: 38183 tgatcgctcagtgataaagga 38203
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 716 bits (361), Expect = 0.0 Identities = 422/441 (95%), Gaps = 1/441 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||| |||||||||||||| || ||||||| ||||||||||||||||| Sbjct: 4691 ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatgg 4750 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 4751 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 4810 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4811 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 4870 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4871 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 4930 Query: 265 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 324 ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||| Sbjct: 4931 atctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaa 4990 Query: 325 ctctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 383 ||||||||||||| |||||||| | |||||| |||||| ||||||||||||||||||||| Sbjct: 4991 ctctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgat 5050 Query: 384 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 443 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5051 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaat 5110 Query: 444 tgaccgctcagtgataaagga 464 ||| ||||||||||||||||| Sbjct: 5111 tgatcgctcagtgataaagga 5131
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 708 bits (357), Expect = 0.0 Identities = 421/441 (95%), Gaps = 1/441 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||| |||||||||||||| || ||||| | ||||||||||||||||| Sbjct: 620 ggaacccaccggagccatagcgaaagcgagtattcataggactattgtcactgcttatgg 679 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 680 acccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagtggagg 739 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 799 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 859 Query: 265 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 324 ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||||| Sbjct: 860 atctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaa 919 Query: 325 ctctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 383 ||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 920 ctctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgat 979 Query: 384 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 443 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 980 gggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaat 1039 Query: 444 tgaccgctcagtgataaagga 464 ||| ||||||||||||||||| Sbjct: 1040 tgatcgctcagtgataaagga 1060
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 694 bits (350), Expect = 0.0 Identities = 421/442 (95%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| Sbjct: 623 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgg 682 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 683 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 742 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 743 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 802 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 862 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 863 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 922 Query: 324 actctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacga 382 |||||||||||||||||||| || |||||||||||| | |||||| ||||||||||| Sbjct: 923 actctgaatactagatatgatccccaaataacaggggataaaggtcaaccagtgagacgg 982 Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 983 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1042 Query: 443 atgaccgctcagtgataaagga 464 |||||||||||||| ||||||| Sbjct: 1043 atgaccgctcagtggtaaagga 1064
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 664 bits (335), Expect = 0.0 Identities = 380/395 (96%), Gaps = 5/395 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 46860 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 46914 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46915 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 46974 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46975 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 47034 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47035 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 47094 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 47095 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 47154 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 47155 gagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggt 47214 Query: 362 caaggtcggccagtgagacgatgggggataagctt 396 ||||||||||||||||||||||||||||||||||| Sbjct: 47215 caaggtcggccagtgagacgatgggggataagctt 47249
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 662 bits (334), Expect = 0.0 Identities = 434/464 (93%), Gaps = 10/464 (2%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| || Sbjct: 86868 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgagagcgagtcttcat 86922 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86923 ggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 86982 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86983 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 87042 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87043 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 87102 Query: 242 tgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcg 300 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| Sbjct: 87103 tgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggccgcg 87162 Query: 301 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 360 |||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||| Sbjct: 87163 agagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc---aataaaagggg 87218 Query: 361 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 420 | | |||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 87219 taagggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagccca 87278 Query: 421 gatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 87279 gatcaccagctaaggcccctaaatgaccgctcagtgatgaagga 87322
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 662 bits (334), Expect = 0.0 Identities = 417/442 (94%), Gaps = 2/442 (0%) Strand = Plus / Minus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| Sbjct: 117526 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgg 117467 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 |||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 117466 acccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggagg 117407 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117406 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 117347 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117346 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 117287 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117286 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 117227 Query: 324 actctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacga 382 |||||||||||||||||||| || |||||| | ||||| | |||| ||||||||||| Sbjct: 117226 actctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacgg 117167 Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 117166 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 117107 Query: 443 atgaccgctcagtgataaagga 464 ||||||||| |||| ||||||| Sbjct: 117106 atgaccgctaagtggtaaagga 117085 Score = 662 bits (334), Expect = 0.0 Identities = 417/442 (94%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| Sbjct: 90576 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgg 90635 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 |||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 90636 acccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggagg 90695 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 90696 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 90755 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90756 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 90815 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90816 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 90875 Query: 324 actctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacga 382 |||||||||||||||||||| || |||||| | ||||| | |||| ||||||||||| Sbjct: 90876 actctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacgg 90935 Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 90936 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 90995 Query: 443 atgaccgctcagtgataaagga 464 ||||||||| |||| ||||||| Sbjct: 90996 atgaccgctaagtggtaaagga 91017
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 660 bits (333), Expect = 0.0 Identities = 391/409 (95%), Gaps = 6/409 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag-cgagtcttaa 60 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | Sbjct: 364785 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaaggcgagtcttca 364839 Query: 61 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 120 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 364840 tagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccaggatga 364899 Query: 121 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 180 ||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 364900 agcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 364959 Query: 181 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364960 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 365019 Query: 241 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 365020 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcg 365079 Query: 301 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 360 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 365080 agagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagggg 365139 Query: 361 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 409 ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 365140 tcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 404 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 463 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 464 a 464 | Sbjct: 129287 a 129287 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 gtcgagagggaaacagcccggatc 424 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 654 bits (330), Expect = 0.0 Identities = 415/439 (94%), Gaps = 7/439 (1%) Strand = Plus / Minus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 145936 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatgg 145877 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 145876 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 145817 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 145816 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaa 145757 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145756 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 145697 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145696 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 145637 Query: 324 actctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtga 377 |||||||||||||| ||||| |||| ||| |||||| ||| |||||| |||||||| Sbjct: 145636 actctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtga 145577 Query: 378 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 437 |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 145576 gacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 145517 Query: 438 cctaaatgaccgctcagtg 456 ||||||||||||||||||| Sbjct: 145516 cctaaatgaccgctcagtg 145498 Score = 654 bits (330), Expect = 0.0 Identities = 415/439 (94%), Gaps = 7/439 (1%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 112526 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatgg 112585 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 112586 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 112645 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 112646 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaa 112705 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112706 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 112765 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112766 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 112825 Query: 324 actctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtga 377 |||||||||||||| ||||| |||| ||| |||||| ||| |||||| |||||||| Sbjct: 112826 actctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtga 112885 Query: 378 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 437 |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 112886 gacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 112945 Query: 438 cctaaatgaccgctcagtg 456 ||||||||||||||||||| Sbjct: 112946 cctaaatgaccgctcagtg 112964
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 648 bits (327), Expect = 0.0 Identities = 413/439 (94%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 28 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 87 ||||||||||||||||||||||||||||||| | |||| ||||||||| |||||||||| Sbjct: 626 acccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacc 685 Query: 88 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 147 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| Sbjct: 686 cgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtcc 745 Query: 148 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 207 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 805 Query: 208 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 266 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 806 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 865 Query: 267 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 326 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 866 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 925 Query: 327 ctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgg 385 ||||||||||||||||| | |||||| |||| | | |||| ||||||||||| ||| Sbjct: 926 ctgaatactagatatgatctccgaataacgggggataagggtcaaccagtgagacggtgg 985 Query: 386 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 445 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 986 gggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatg 1045 Query: 446 accgctcagtgataaagga 464 ||||||||||| ||||||| Sbjct: 1046 accgctcagtggtaaagga 1064
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 636 bits (321), Expect = e-179 Identities = 431/464 (92%), Gaps = 9/464 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| || Sbjct: 88954 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgagagcgagtcttcat 89008 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89009 ggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 89068 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 89069 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 89128 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89129 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 89188 Query: 242 tgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcg 300 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || Sbjct: 89189 tgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggccacg 89248 Query: 301 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 360 |||||||||||||||||||||||||||||||||||||| | ||||| | || |||| Sbjct: 89249 agagcggtaccaaatcgaggcaaactctgaatactagat-taccccaata--aaaggggg 89305 Query: 361 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 420 | | |||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89306 taagggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagccca 89365 Query: 421 gatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 89366 gatcaccagctaaggcccctaaatgaccgctcagtgatgaagga 89409
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 620 bits (313), Expect = e-175 Identities = 410/441 (92%), Gaps = 1/441 (0%) Strand = Plus / Minus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| Sbjct: 127818 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatgg 127759 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| Sbjct: 127758 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggagg 127699 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127698 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 127639 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 127638 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggac 127579 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 127578 tacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaa 127519 Query: 324 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 383 |||||||||||||| |||||||| || ||| ||| | |||| ||||||||||||| Sbjct: 127518 actctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgat 127459 Query: 384 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 443 |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 127458 gggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaa 127399 Query: 444 tgaccgctcagtgataaagga 464 |||| |||||||| ||||||| Sbjct: 127398 tgactgctcagtggtaaagga 127378 Score = 620 bits (313), Expect = e-175 Identities = 410/441 (92%), Gaps = 1/441 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| Sbjct: 95629 ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatgg 95688 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| Sbjct: 95689 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggagg 95748 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95749 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 95808 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95809 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggac 95868 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 95869 tacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaa 95928 Query: 324 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 383 |||||||||||||| |||||||| || ||| ||| | |||| ||||||||||||| Sbjct: 95929 actctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgat 95988 Query: 384 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 443 |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 95989 gggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaa 96048 Query: 444 tgaccgctcagtgataaagga 464 |||| |||||||| ||||||| Sbjct: 96049 tgactgctcagtggtaaagga 96069
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 599 bits (302), Expect = e-168 Identities = 409/442 (92%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 ||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||| Sbjct: 627 ggaacccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatgg 686 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 687 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 746 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 747 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 806 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 807 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 866 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 867 tatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 926 Query: 324 actctgaatactagatatgacccaaaaataacag-gggtcaaggtcggccagtgagacga 382 |||||||||||| |||| ||| | ||||| || | || | |||| |||||||||| Sbjct: 927 actctgaatactggataggactccctaataatagagagtaagggtcaaccagtgagacag 986 Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 987 tgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaa 1046 Query: 443 atgaccgctcagtgataaagga 464 ||||||||| |||| ||||||| Sbjct: 1047 atgaccgctaagtggtaaagga 1068
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 539 bits (272), Expect = e-150 Identities = 323/340 (95%), Gaps = 5/340 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 4833 ggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcat 4887 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4888 agggctattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 4947 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||| | |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4948 gcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 5007 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5008 tgtggttagcggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 5067 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 5068 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcga 5127 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatat 341 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5128 gagcggtaccaaatcgaggcaaactctgaatactagatat 5167 Score = 180 bits (91), Expect = 3e-42 Identities = 97/99 (97%) Strand = Plus / Plus Query: 366 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 426 ccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaagga 5280
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 539 bits (272), Expect = e-150 Identities = 323/340 (95%), Gaps = 5/340 (1%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 23092 ggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcat 23038 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23037 agggctattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 22978 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||| | |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 22977 gcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 22918 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22917 tgtggttagcggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 22858 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 22857 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcga 22798 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatat 341 |||||||||||||||||||||||||||||||||||||||| Sbjct: 22797 gagcggtaccaaatcgaggcaaactctgaatactagatat 22758 Score = 180 bits (91), Expect = 3e-42 Identities = 97/99 (97%) Strand = Plus / Minus Query: 366 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 426 ccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaagga 22645
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 535 bits (270), Expect = e-149 Identities = 301/310 (97%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 29 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 88 |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 115584 cccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggaccc 115525 Query: 89 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 148 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 115524 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 115465 Query: 149 aaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcga 208 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115464 aaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcga 115405 Query: 209 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 115404 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatc 115345 Query: 268 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 327 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 115344 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 115285 Query: 328 tgaatactag 337 |||||||||| Sbjct: 115284 tgaatactag 115275 Score = 535 bits (270), Expect = e-149 Identities = 301/310 (97%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 29 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 88 |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 86536 cccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggaccc 86595 Query: 89 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 148 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 86596 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 86655 Query: 149 aaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcga 208 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86656 aaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcga 86715 Query: 209 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86716 acccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatc 86775 Query: 268 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 327 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86776 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 86835 Query: 328 tgaatactag 337 |||||||||| Sbjct: 86836 tgaatactag 86845 Score = 143 bits (72), Expect = 6e-31 Identities = 93/100 (93%) Strand = Plus / Minus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaagga 115147 Score = 143 bits (72), Expect = 6e-31 Identities = 93/100 (93%) Strand = Plus / Plus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaagga 86973
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 533 bits (269), Expect = e-148 Identities = 303/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 31 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 90 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 4518 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 4577 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 4578 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 4637 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4638 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 4697 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4698 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 4757 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4758 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 4817 Query: 330 aatactagatatg 342 |||||||| |||| Sbjct: 4818 aatactaggtatg 4830 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaagga 4957
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 533 bits (269), Expect = e-148 Identities = 303/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 31 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 90 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 628 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 687 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 688 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 747 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 807 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 808 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 867 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 927 Query: 330 aatactagatatg 342 |||||||| |||| Sbjct: 928 aatactaggtatg 940 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaagga 1067
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 533 bits (269), Expect = e-148 Identities = 303/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 31 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 90 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 150617 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 150558 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 150557 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 150498 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150497 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 150438 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 150437 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 150378 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 150377 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 150318 Query: 330 aatactagatatg 342 |||||||| |||| Sbjct: 150317 aatactaggtatg 150305 Score = 533 bits (269), Expect = e-148 Identities = 303/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 31 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 90 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 118049 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 118108 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 118109 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 118168 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118169 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 118228 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 118229 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 118288 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118289 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 118348 Query: 330 aatactagatatg 342 |||||||| |||| Sbjct: 118349 aatactaggtatg 118361 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Minus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaagga 150178 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaagga 118488
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 533 bits (269), Expect = e-148 Identities = 326/345 (94%), Gaps = 5/345 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 5101 ggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcat 5155 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5156 agggctattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 5215 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 | || | |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5216 gtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 5275 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5276 tgtggttagcggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgt 5335 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 5336 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcga 5395 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 346 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5396 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440 Score = 182 bits (92), Expect = 7e-43 Identities = 105/108 (97%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 358 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 416 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 417 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaagga 5552
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 533 bits (269), Expect = e-148 Identities = 326/345 (94%), Gaps = 5/345 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 5101 ggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgagtcttcat 5155 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5156 agggctattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 5215 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 | || | |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5216 gtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 5275 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5276 tgtggttagcggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgt 5335 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 5336 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcga 5395 Query: 302 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 346 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5396 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440 Score = 182 bits (92), Expect = 7e-43 Identities = 105/108 (97%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 358 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 416 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 417 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaagga 5552
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 533 bits (269), Expect = e-148 Identities = 303/313 (96%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 31 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 90 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 628 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccga 687 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 688 acctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaa 747 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 807 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 808 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatcta 867 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 927 Query: 330 aatactagatatg 342 |||||||| |||| Sbjct: 928 aatactaggtatg 940 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaagga 1067
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 519 bits (262), Expect = e-144 Identities = 415/462 (89%), Gaps = 8/462 (1%) Strand = Plus / Plus Query: 5 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 64 |||||||||||||||| |||| ||||||||| | |||||||||| |||||| ||||| Sbjct: 611 agtggcttggttaagg----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagg 665 Query: 65 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 124 || | ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||| | Sbjct: 666 gcaaatgtcattgcttatggacccgaacttgggtgatctaaccatgaccaagatgaaatt 725 Query: 125 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 184 ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 tggttgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 785 Query: 185 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 244 ||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||| | Sbjct: 786 ggttaggggtgaaatgccaatcaaacccaaagctagttggttctccccgaaatgcgttta 845 Query: 245 ggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 304 ||||||| |||| || ||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 846 ggcgcagaagtt-accagacatctaggggtaaagcactgtttcggttcgggtcgcgagag 904 Query: 305 cggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtc 362 | ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| | Sbjct: 905 ccgtaccaaattgaggcaaactatgaatactagatatgacctccaaaaataacagggata 964 Query: 363 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 422 ||||| | |||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 965 aaggtggaccagtgagaccatgggggataagcttcatcgtcgagaggggaacagcccaga 1024 Query: 423 tcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 1025 tcaccagctaaggcccctaaatgaccgctaagttataaagga 1066
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 509 bits (257), Expect = e-141 Identities = 321/340 (94%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||| |||||||||||| | | ||||||||||| ||||||||||||||||| Sbjct: 588 ggcagtggcctggttaagggaaagaa--ccaccggagccatagcgaaagcgagtcttccc 645 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 705 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 706 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 765 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 825 Query: 242 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 300 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 826 tgaggcgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggccgcg 885 Query: 301 cgagcggtaccaaatcgaggcaaactctgaatactagata 340 |||||||||||||||||||||||||||||||||| |||| Sbjct: 886 agagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 431 taaggcccctaaatgaccgctcagtg 456 ||||||||||||||||||||| |||| Sbjct: 1015 taaggcccctaaatgaccgctaagtg 1040
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 507 bits (256), Expect = e-141 Identities = 392/435 (90%), Gaps = 3/435 (0%) Strand = Plus / Minus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||| Sbjct: 138645 ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgg 138586 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 138585 acccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggagg 138526 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 138525 tccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccac 138466 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-gga 263 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138465 tcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggc 138406 Query: 264 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 | || | |||||||||||||| |||||||||||||| |||| |||||||| |||||||| Sbjct: 138405 tacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaa 138346 Query: 324 actctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacg 381 |||||||||||| | |||| ||| | | | ||| |||| ||||||||||||||||||| Sbjct: 138345 actctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacg 138286 Query: 382 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 441 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 138285 gtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctg 138226 Query: 442 aatgaccgctcagtg 456 ||||||||||||||| Sbjct: 138225 aatgaccgctcagtg 138211 Score = 507 bits (256), Expect = e-141 Identities = 392/435 (90%), Gaps = 3/435 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||| Sbjct: 83232 ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgg 83291 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 83292 acccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggagg 83351 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 83352 tccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccac 83411 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-gga 263 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 83412 tcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggc 83471 Query: 264 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 | || | |||||||||||||| |||||||||||||| |||| |||||||| |||||||| Sbjct: 83472 tacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaa 83531 Query: 324 actctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacg 381 |||||||||||| | |||| ||| | | | ||| |||| ||||||||||||||||||| Sbjct: 83532 actctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacg 83591 Query: 382 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 441 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 83592 gtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctg 83651 Query: 442 aatgaccgctcagtg 456 ||||||||||||||| Sbjct: 83652 aatgaccgctcagtg 83666
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 505 bits (255), Expect = e-140 Identities = 294/307 (95%), Gaps = 5/307 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 132 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 186 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 246 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 306 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 366 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 301 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 367 tgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 426 Query: 302 gagcggt 308 ||||||| Sbjct: 427 gagcggt 433
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 486 bits (245), Expect = e-134 Identities = 281/293 (95%), Gaps = 5/293 (1%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 128 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 182 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 242 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 302 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 303 tgtggttaggggtgaaatgccactcgaacccagagctagctggctctccccgaaatgcgt 362 Query: 242 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 294 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 tgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 476 bits (240), Expect = e-131 Identities = 292/308 (94%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||||||||||||||||||||| | |||| |||||||| |||||| |||||||| Sbjct: 144553 ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaac 144612 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 144613 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaacc 144672 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144673 gactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 144732 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctagg 271 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 144733 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctagg 144792 Query: 272 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 331 |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 144793 ggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaa 144852 Query: 332 tactagat 339 |||||||| Sbjct: 144853 tactagat 144860 Score = 476 bits (240), Expect = e-131 Identities = 292/308 (94%), Gaps = 1/308 (0%) Strand = Plus / Minus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||||||||||||||||||||| | |||| |||||||| |||||| |||||||| Sbjct: 88298 ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaac 88239 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 88238 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaacc 88179 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88178 gactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 88119 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctagg 271 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 88118 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctagg 88059 Query: 272 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 331 |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 88058 ggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaa 87999 Query: 332 tactagat 339 |||||||| Sbjct: 87998 tactagat 87991 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 431 taaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||| ||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaagga 144992 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Minus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 431 taaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||| ||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaagga 87859
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 454 bits (229), Expect = e-124 Identities = 235/237 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 75096 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 75037 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75036 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 74977 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74976 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 74917 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74916 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 gtcgagagggaaacagcccggatc 424 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 454 bits (229), Expect = e-124 Identities = 235/237 (99%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 382442 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 382501 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382502 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 382561 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382562 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 382621 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382622 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 gtcgagagggaaacagcccggatc 424 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 gtcgagagggaaacagcccggatc 424 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 454 bits (229), Expect = e-124 Identities = 235/237 (99%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 113187 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 113128 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113127 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 113068 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113067 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 113008 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113007 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 gtcgagagggaaacagcccggatc 424 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 454 bits (229), Expect = e-124 Identities = 238/241 (98%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 367869 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 367810 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367809 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 367750 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367749 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 367690 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 367689 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgt 367630 Query: 242 t 242 | Sbjct: 367629 t 367629 Score = 454 bits (229), Expect = e-124 Identities = 238/241 (98%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 184474 ggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcat 184415 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184414 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 184355 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184354 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 184295 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 184294 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgt 184235 Query: 242 t 242 | Sbjct: 184234 t 184234 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 gtcgagagggaaacagcccggatc 424 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 452 bits (228), Expect = e-124 Identities = 322/352 (91%), Gaps = 1/352 (0%) Strand = Plus / Minus Query: 113 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 172 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 173 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 232 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 233 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 292 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 293 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 352 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 353 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 412 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 413 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 ||| || |||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaagga 2761 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| Sbjct: 3207 ggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtcagaat 3153 Query: 62 agggcgattgtcactgcttatggacccgaacct 94 |||| ||| ||||||||||||||||||||||| Sbjct: 3152 ggggcaattctcactgcttatggacccgaacct 3120
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 450 bits (227), Expect = e-123 Identities = 317/343 (92%), Gaps = 8/343 (2%) Strand = Plus / Minus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||| || |||||||||||||||||| |||||||||| || Sbjct: 5943 ggcagtggcttggttaagggcac-----ccaccggagccgtagcgagagcgagtcttcat 5889 Query: 62 agggcgattgtcactgctt-atggacccgaacctgggtgatctatccatgaccaggatga 120 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5888 agggcaattgtcactgctttatggacccgaacctgggtgatctatccatgaccaggatga 5829 Query: 121 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 180 |||| ||||||||||||| |||||||||||||||||||||||| | |||||||||||||| Sbjct: 5828 agct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcagcggatgag 5770 Query: 181 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5769 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 5710 Query: 241 ttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgc 299 ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| | Sbjct: 5709 ttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtataggccgt 5650 Query: 300 gcgagcggtaccaaatcgaggcaaactctgaatactagatatg 342 | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5649 gtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 135 bits (68), Expect = 1e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 425 accagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaagga 5503
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 424 bits (214), Expect = e-115 Identities = 284/306 (92%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 747 ccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaac 806 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||| Sbjct: 807 ccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaacc 866 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 867 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactc 926 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagg 271 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 927 ggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctagg 986 Query: 272 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 331 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 987 ggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaa 1046 Query: 332 tactag 337 |||||| Sbjct: 1047 tactag 1052 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 425 accagctaaggcccctaaatgaccgctcagtg 456 |||||||||||||||||||||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtg 1154
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 424 bits (214), Expect = e-115 Identities = 284/306 (92%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 630 ccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaac 689 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||| Sbjct: 690 ccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaacc 749 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 750 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactc 809 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagg 271 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 810 ggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctagg 869 Query: 272 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 331 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 870 ggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaa 929 Query: 332 tactag 337 |||||| Sbjct: 930 tactag 935 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 425 accagctaaggcccctaaatgaccgctcagtg 456 |||||||||||||||||||||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtg 1037
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 424 bits (214), Expect = e-115 Identities = 284/306 (92%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 643 ccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaac 702 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||| Sbjct: 703 ccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaacc 762 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 763 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactc 822 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagg 271 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 823 ggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctagg 882 Query: 272 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 331 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 883 ggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaa 942 Query: 332 tactag 337 |||||| Sbjct: 943 tactag 948 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 365 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 424 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 425 accagctaaggcccctaaatgaccgctcagtg 456 |||||||||||||||||||||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtg 1050
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 410 bits (207), Expect = e-111 Identities = 289/315 (91%), Gaps = 1/315 (0%) Strand = Plus / Plus Query: 30 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 89 ||||||||||| |||||||||| |||||| ||||||| | ||||| |||||||| ||||| Sbjct: 644 ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgcttatgtacccg 703 Query: 90 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 149 ||| ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| Sbjct: 704 aacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagtggaggtccga 763 Query: 150 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 764 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaa 823 Query: 210 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 269 |||| |||||||||||||||||||||||||||| ||| ||||||||| || ||||||||| Sbjct: 824 cccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-accggacatcta 882 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||||||||||||||||||||||| || |||||||||||||| |||||||||| || Sbjct: 883 ggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatg 942 Query: 330 aatactagatatgac 344 ||||||||||||||| Sbjct: 943 aatactagatatgac 957 Score = 143 bits (72), Expect = 6e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 369 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 428 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 429 gctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||||| ||| |||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaagga 1095
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 410 bits (207), Expect = e-111 Identities = 293/319 (91%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||| |||||| |||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 624 ggaatccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 682 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 683 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtggagg 742 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 743 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 802 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 803 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 862 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 863 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 922 Query: 324 actctgaatactagatatg 342 ||||||||||||| ||||| Sbjct: 923 actctgaatactaaatatg 941 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 430 ctaaggcccctaaat 444 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 410 bits (207), Expect = e-111 Identities = 293/319 (91%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||| |||||| |||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 3658 ggaatccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 3716 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 3717 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtggagg 3776 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3777 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 3836 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 3837 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 3896 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 3897 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 3956 Query: 324 actctgaatactagatatg 342 ||||||||||||| ||||| Sbjct: 3957 actctgaatactaaatatg 3975 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 430 ctaaggcccctaaat 444 |||||||||||||| Sbjct: 4045 ttaaggcccctaaat 4059
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 404 bits (204), Expect = e-109 Identities = 234/244 (95%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 577 ggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcat 631 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 691 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 751 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 811 Query: 242 tgag 245 |||| Sbjct: 812 tgag 815
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 404 bits (204), Expect = e-109 Identities = 284/308 (92%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 31 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 90 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 630 caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccga 688 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| |||||||||||||||| |||||||||||||||| |||||| ||| |||||||||| Sbjct: 689 acccgggtgatctatccatggccaggatgaagcttgggtgaaaccaagtggaggtccgaa 748 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| Sbjct: 749 ccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaac 808 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 269 | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | ||| Sbjct: 809 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgccta 868 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 869 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 928 Query: 330 aatactag 337 |||||||| Sbjct: 929 aatactag 936 Score = 133 bits (67), Expect = 6e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 430 ctaaggcccctaaatgaccgctcagtg 456 ||||||||||||||||||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtg 1039
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 402 bits (203), Expect = e-109 Identities = 292/319 (91%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||| |||||| |||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 624 ggaatccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 682 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| |||| Sbjct: 683 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtggagg 742 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 743 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 802 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 803 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 862 Query: 265 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 863 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 922 Query: 324 actctgaatactagatatg 342 ||||||||||||| ||||| Sbjct: 923 actctgaatactaaatatg 941 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 430 ctaaggcccctaaat 444 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1011 ggcccctaaatgaccactaagttataaagga 1041
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 396 bits (200), Expect = e-107 Identities = 345/391 (88%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 392 bits (198), Expect = e-106 Identities = 213/218 (97%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 81 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 140 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 141 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 200 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 260 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgtt 242 |||||||||||||||||||||||||||||||||||||| Sbjct: 261 tcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 359 bits (181), Expect = 5e-96 Identities = 199/205 (97%) Strand = Plus / Plus Query: 260 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 319 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 320 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 379 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 380 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 440 taaatgaccgctcagtgataaagga 464 ||||||| ||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaagga 521
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 389 bits (196), Expect = e-105 Identities = 344/391 (87%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1011 ggcccctaaatgaccactaagttataaagga 1041
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 389 bits (196), Expect = e-105 Identities = 345/391 (88%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gt 831 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1011 ggcccctaaatgaccactaagttataaagga 1041
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 344/391 (87%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 389 bits (196), Expect = e-105 Identities = 282/308 (91%), Gaps = 2/308 (0%) Strand = Plus / Minus Query: 31 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 90 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 124635 caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccga 124577 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| |||||||||||||||| |||||||||||||||| |||| | ||| |||||||||| Sbjct: 124576 acccgggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaa 124517 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| Sbjct: 124516 ccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaac 124457 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 269 | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | ||| Sbjct: 124456 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgccta 124397 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 124396 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctg 124337 Query: 330 aatactag 337 |||||||| Sbjct: 124336 aatactag 124329 Score = 389 bits (196), Expect = e-105 Identities = 282/308 (91%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 31 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 90 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 95231 caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccga 95289 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| |||||||||||||||| |||||||||||||||| |||| | ||| |||||||||| Sbjct: 95290 acccgggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaa 95349 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| Sbjct: 95350 ccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaac 95409 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atcta 269 | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | ||| Sbjct: 95410 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgccta 95469 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 95470 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctg 95529 Query: 330 aatactag 337 |||||||| Sbjct: 95530 aatactag 95537 Score = 133 bits (67), Expect = 6e-28 Identities = 82/87 (94%) Strand = Plus / Minus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 430 ctaaggcccctaaatgaccgctcagtg 456 ||||||||||||||||||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtg 124226 Score = 133 bits (67), Expect = 6e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 430 ctaaggcccctaaatgaccgctcagtg 456 ||||||||||||||||||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtg 95640
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 381 bits (192), Expect = e-102 Identities = 343/391 (87%), Gaps = 3/391 (0%) Strand = Plus / Plus Query: 76 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 135 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 136 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 195 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 196 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 255 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 256 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 atccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 316 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 373 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 374 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 433 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 434 ggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| || ||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaagga 1042
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 363 bits (183), Expect = 3e-97 Identities = 277/307 (90%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||| |||||| ||||| |||||||||| |||||||||||||| Sbjct: 644 ggagccatagcgaaagcaagtcttttcagggctattgtcactgtctatggacccgaaccc 703 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| |||||||||| ||||||| |||||| Sbjct: 704 gggtgatctaaccatggccaggatgaagcttgggtgaaactaagtggaggtcccaaccga 763 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 | ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | | Sbjct: 764 ccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcgg 823 Query: 215 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagggg 273 ||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||| Sbjct: 824 agctagctggttctccccgaaatgcgttgaggcgcagcaattaactggactatccagggg 883 Query: 274 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 333 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 884 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaata 943 Query: 334 ctagata 340 || |||| Sbjct: 944 ctggata 950 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 433 aggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||| ||||| |||| ||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaagga 1058
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 363 bits (183), Expect = 3e-97 Identities = 299/335 (89%), Gaps = 2/335 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| | || ||||||||| |||||||||| |||||| | Sbjct: 4650 ggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagtcttttt 4708 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 4709 agggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaa 4768 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| Sbjct: 4769 gcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagc 4828 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 4829 tgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 4888 Query: 242 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 300 |||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| || Sbjct: 4889 tgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacg 4948 Query: 301 cgagcggtaccaaatcgaggcaaactctgaatact 335 || |||||||||||||||||||||||||||||| Sbjct: 4949 aaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 433 aggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||| ||||| |||| ||||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaagga 5096
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 363 bits (183), Expect = 3e-97 Identities = 299/335 (89%), Gaps = 2/335 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| | || ||||||||| |||||||||| |||||| | Sbjct: 617 ggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagtcttttt 675 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 676 agggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaa 735 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| Sbjct: 736 gcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagc 795 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 796 tgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 855 Query: 242 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 300 |||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| || Sbjct: 856 tgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacg 915 Query: 301 cgagcggtaccaaatcgaggcaaactctgaatact 335 || |||||||||||||||||||||||||||||| Sbjct: 916 aaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 433 aggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||| ||||| |||| ||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagga 1063
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 363 bits (183), Expect = 3e-97 Identities = 299/335 (89%), Gaps = 2/335 (0%) Strand = Plus / Plus Query: 2 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 61 |||||||||||||||||||||| | || ||||||||| |||||||||| |||||| | Sbjct: 617 ggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagtcttttt 675 Query: 62 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 121 ||||| |||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 676 agggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaa 735 Query: 122 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 181 |||||| | |||||||| ||||||| ||||||| ||||||||| |||| ||||||||| Sbjct: 736 gcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagc 795 Query: 182 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 241 ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 796 tgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 855 Query: 242 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 300 |||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| || Sbjct: 856 tgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacg 915 Query: 301 cgagcggtaccaaatcgaggcaaactctgaatact 335 || |||||||||||||||||||||||||||||| Sbjct: 916 aaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 433 aggcccctaaatgaccgctcagtgataaag 462 ||||||||||||| ||||| |||| ||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaag 1061
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 361 bits (182), Expect = 1e-96 Identities = 279/309 (90%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 ||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 629 accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaa 687 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||| Sbjct: 688 cccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaac 747 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 748 cgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaact 807 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatcta 269 | ||||||||||||||||||||||||||||||||||||||| |||| | || |||| Sbjct: 808 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttcta 867 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 927 Query: 330 aatactaga 338 ||||||||| Sbjct: 928 aatactaga 936 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 431 taaggcccctaaatgaccgctcagtg 456 ||||||||||||||| ||||| |||| Sbjct: 1012 taaggcccctaaatggccgctaagtg 1037
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 361 bits (182), Expect = 1e-96 Identities = 279/309 (90%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 ||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 115033 accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaa 114975 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||| Sbjct: 114974 cccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaac 114915 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 114914 cgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaact 114855 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatcta 269 | ||||||||||||||||||||||||||||||||||||||| |||| | || |||| Sbjct: 114854 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttcta 114795 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 114794 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 114735 Query: 330 aatactaga 338 ||||||||| Sbjct: 114734 aatactaga 114726 Score = 361 bits (182), Expect = 1e-96 Identities = 279/309 (90%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 ||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 86955 accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaa 87013 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || |||||||||| ||||| |||||||||||||| | ||||||| || || |||||||| Sbjct: 87014 cccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaac 87073 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 87074 cgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaact 87133 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatcta 269 | ||||||||||||||||||||||||||||||||||||||| |||| | || |||| Sbjct: 87134 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttcta 87193 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 87194 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 87253 Query: 330 aatactaga 338 ||||||||| Sbjct: 87254 aatactaga 87262 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 431 taaggcccctaaatgaccgctcagtg 456 ||||||||||||||| ||||| |||| Sbjct: 114650 taaggcccctaaatggccgctaagtg 114625 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 431 taaggcccctaaatgaccgctcagtg 456 ||||||||||||||| ||||| |||| Sbjct: 87338 taaggcccctaaatggccgctaagtg 87363
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 351 bits (177), Expect = 1e-93 Identities = 280/313 (89%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 |||| |||||||||||||||||||| | |||||| |||||||| ||||||||||||| Sbjct: 1033 accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaa 1092 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || |||||||||||||||| ||||| |||||||||| |||| | ||| |||| |||||| Sbjct: 1093 cccgggtgatctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaac 1152 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1153 cgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaact 1212 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 270 | ||||||||||||||||||||||||||||||||||||||| |||||| || | ||| Sbjct: 1213 cggagctagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttag 1272 Query: 271 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 330 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1273 gggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctga 1332 Query: 331 atactagatatga 343 |||||||| |||| Sbjct: 1333 atactagacatga 1345 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 372 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 431 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 432 aaggcccctaaatgaccgctcagtg 456 ||||||||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtg 1442
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 351 bits (177), Expect = 1e-93 Identities = 278/309 (89%), Gaps = 2/309 (0%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 ||||||||||||||||| |||| || | || || |||||||| |||| |||||||||| Sbjct: 589 ggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactgtttatagacccgaaccc 647 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||||||||| ||||| |||| ||||| |||| | ||| |||||||||||||| Sbjct: 648 gggtgatctatccatggccagggtgaaacttgggtgaagccaagtggaggtccgaaccga 707 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | | Sbjct: 708 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcgg 767 Query: 215 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagggg 273 |||||||||||||||||||||||||||||||||||||| |||| ||||| | |||||| Sbjct: 768 agctagctggttctccccgaaatgcgttgaggcgcagcgattgattggactacttagggg 827 Query: 274 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 333 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 828 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaata 887 Query: 334 ctagatatg 342 |||| |||| Sbjct: 888 ctaggtatg 896 Score = 137 bits (69), Expect = 4e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 372 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 431 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 432 aaggcccctaaatgaccgctcagtgataaagga 464 |||||||| |||||||||||||||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaagga 1004
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 90 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 266 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 267 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 326 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 327 ctgaatactag 337 ||||||||| Sbjct: 932 aagaatactag 942 Score = 155 bits (78), Expect = 2e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 431 taaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||| ||||| |||||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaagga 1053
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 333 bits (168), Expect = 3e-88 Identities = 277/310 (89%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 90 |||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||| Sbjct: 696 ccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttttatggacccga 755 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| |||||||||| |||||||||||||||||||||| | |||| ||| || ||||||| Sbjct: 756 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagtccgaa 815 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 816 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 875 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg-gacatc 267 || ||||||||||||||||||||||||||||||||||||||| ||||| || | || Sbjct: 876 ccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtc 935 Query: 268 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 327 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 936 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaacta 995 Query: 328 tgaatactag 337 ||||||||| Sbjct: 996 agaatactag 1005 Score = 107 bits (54), Expect = 3e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 431 taaggcccctaaatgaccgctcagtg 456 |||||||||| |||| ||||| |||| Sbjct: 1083 taaggcccctgaatggccgctaagtg 1108
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 331 bits (167), Expect = 1e-87 Identities = 279/315 (88%), Gaps = 1/315 (0%) Strand = Plus / Plus Query: 30 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 89 ||||||||||| |||||||||| |||||| |||||| | ||||| ||||| |||||||| Sbjct: 619 ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccg 678 Query: 90 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 149 ||| ||||||||||| |||||||||||||| | |||| | |||||||| | |||| || Sbjct: 679 aacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctga 738 Query: 150 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 739 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaa 798 Query: 210 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 269 |||| ||||||||||||| ||||||||||| || ||||||||||||| || || |||||| Sbjct: 799 cccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatcta 857 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||| ||||| |||||||| || |||||||||||||| |||||| ||| || Sbjct: 858 ggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatg 917 Query: 330 aatactagatatgac 344 ||||||||||||||| Sbjct: 918 aatactagatatgac 932 Score = 115 bits (58), Expect = 1e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 347 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 406 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 407 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 464 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaagga 1061
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 270 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 271 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 330 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 331 atactagatatga 343 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 141 bits (71), Expect = 2e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||| |||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaagga 1009
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 7e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 25 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 84 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 203 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 141 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 200 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 201 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 260 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 261 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 320 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 321 caaactctgaatactagatat 341 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 311 bits (157), Expect = 1e-81 Identities = 273/309 (88%), Gaps = 2/309 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||| ||||||||| |||||||||||||| |||||| |||||||||||||| Sbjct: 780 ccggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttatggacccgaac 839 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| |||||||||||||||||||| | | |||| || || ||||||||| Sbjct: 840 ccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtggaagtccgaacc 899 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| | Sbjct: 900 gaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactc 959 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tggac-atctag 270 ||||||||||||||||||||||||||||||||||||||| ||| || ||| | ||||| Sbjct: 960 ggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctag 1019 Query: 271 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 330 |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || Sbjct: 1020 gggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaaga 1079 Query: 331 atactagat 339 ||||||||| Sbjct: 1080 atactagat 1088 Score = 131 bits (66), Expect = 2e-27 Identities = 87/94 (92%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 431 taaggcccctaaatgaccgctcagtgataaagga 464 |||||||||| |||| ||||| |||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaagga 1196
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 309 bits (156), Expect = 4e-81 Identities = 156/156 (100%) Strand = Plus / Minus Query: 309 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 369 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 429 gctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaagga 364
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 68 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 127 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 128 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 187 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 188 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 247 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 248 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 304 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 305 cggtaccaaatcgaggcaaactctgaatactaga 338 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 2e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 431 taaggcccctaaatgaccgctcagtg 456 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 84 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 143 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 144 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 203 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 204 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 262 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 263 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 321 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 322 aaactctgaatactagatatgac 344 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 433 aggcccctaaatg 445 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 37 agccgtagcgaaagcgagtcttaatagggcgat 69 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 84 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 143 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 144 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 203 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 204 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 262 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 263 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 321 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 322 aaactctgaatactagatatgac 344 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 433 aggcccctaaatg 445 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 37 agccgtagcgaaagcgagtcttaatagggcgat 69 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 4e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 84 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 143 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 144 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 203 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 204 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 262 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 263 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 321 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 322 aaactctgaatactagatatgac 344 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 433 aggcccctaaatg 445 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 37 agccgtagcgaaagcgagtcttaatagggcgat 69 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 293 bits (148), Expect = 3e-76 Identities = 267/304 (87%), Gaps = 2/304 (0%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacc 93 |||||| |||||||||||||| ||||||| ||| || |||||| |||| |||||||||| Sbjct: 2449 ggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagacccgaacc 2508 Query: 94 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 153 |||||||||| ||||| ||||| |||||||| | | ||||||| |||| |||||||| Sbjct: 2509 cgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcccgaaccg 2568 Query: 154 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 213 | ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 2569 atcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatcgaacccg 2628 Query: 214 gagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggg 272 ||||||||||||||||||||||||||||||||||||||| ||||| | || ||||| Sbjct: 2629 gagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataatttaggg 2688 Query: 273 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 332 ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 2689 gtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctgaat 2748 Query: 333 acta 336 |||| Sbjct: 2749 acta 2752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 443 at 444 || Sbjct: 2838 at 2839
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 293 bits (148), Expect = 3e-76 Identities = 267/304 (87%), Gaps = 2/304 (0%) Strand = Plus / Minus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacc 93 |||||| |||||||||||||| | |||| ||| || |||||| |||| |||||||||| Sbjct: 114799 ggagccctagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacc 114740 Query: 94 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 153 |||||||||| ||||| ||||| |||||||||| | |||||||| |||| |||||| | Sbjct: 114739 cgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactg 114680 Query: 154 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 213 | | |||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| Sbjct: 114679 attaatgttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccg 114620 Query: 214 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggg 272 ||||||||||||||||||||||||| ||||||||||||| ||||| | | | ||||| Sbjct: 114619 gagctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggg 114560 Query: 273 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 332 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 114559 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 114500 Query: 333 acta 336 |||| Sbjct: 114499 acta 114496 Score = 293 bits (148), Expect = 3e-76 Identities = 267/304 (87%), Gaps = 2/304 (0%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacc 93 |||||| |||||||||||||| | |||| ||| || |||||| |||| |||||||||| Sbjct: 2718 ggagccctagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacc 2777 Query: 94 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 153 |||||||||| ||||| ||||| |||||||||| | |||||||| |||| |||||| | Sbjct: 2778 cgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactg 2837 Query: 154 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 213 | | |||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| Sbjct: 2838 attaatgttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccg 2897 Query: 214 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggg 272 ||||||||||||||||||||||||| ||||||||||||| ||||| | | | ||||| Sbjct: 2898 gagctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggg 2957 Query: 273 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 332 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2958 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaat 3017 Query: 333 acta 336 |||| Sbjct: 3018 acta 3021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 430 ctaaggcccctaaat 444 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 430 ctaaggcccctaaat 444 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 4e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 34 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 93 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 94 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 153 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 154 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 213 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 214 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 273 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 274 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 333 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 334 ct 335 || Sbjct: 2489 ct 2490 Score = 107 bits (54), Expect = 3e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 431 taaggcccctaaatgaccgctcagtgataaagga 464 |||||||||||||| | ||| |||||||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaagga 2598
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 71 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 130 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 131 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 190 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 191 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 250 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 251 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 307 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 308 taccaaatcgaggcaaactctgaatactaga 338 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 155 bits (78), Expect = 2e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 431 taaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||||||| |||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaagga 1059
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 6e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 90 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 269 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 330 aatactagata 340 ||||||||||| Sbjct: 921 aatactagata 931 Score = 125 bits (63), Expect = 1e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||| |||||| || | ||||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaagga 1038
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 6e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 90 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 269 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 330 aatactagata 340 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 125 bits (63), Expect = 1e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 |||||||||| |||||| || | ||||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaagga 25847
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 2e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 271 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 272 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 331 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 332 tac 334 ||| Sbjct: 549 tac 551 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 |||||| ||| ||||| ||| |||||||||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaagga 660
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 2e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 37 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 96 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 97 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 156 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 157 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 216 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 217 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 273 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 274 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 333 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 334 ctaga 338 ||||| Sbjct: 935 ctaga 939 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 431 taaggcccctaaatgaccgctcagtg 456 ||||||||||||||| ||||| |||| Sbjct: 1017 taaggcccctaaatggccgctaagtg 1042
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 2e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 101 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 102 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 161 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 162 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 221 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 222 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 278 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 279 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 335 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 3e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 431 taaggcccctaaat 444 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 2e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 37 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 96 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 97 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 156 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 157 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 216 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 217 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 273 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 274 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 333 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 334 ctaga 338 ||||| Sbjct: 2817 ctaga 2821 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 431 taaggcccctaaatgaccgctcagtg 456 ||||||||||||||| ||||| |||| Sbjct: 2899 taaggcccctaaatggccgctaagtg 2924
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 46 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 105 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 106 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 165 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 166 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 225 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 226 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 284 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 285 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 46 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 105 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 106 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 165 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 166 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 225 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 226 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 284 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 285 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 431 taaggcccctaaat 444 |||||||||||||| Sbjct: 189932 taaggcccctaaat 189945 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 431 taaggcccctaaat 444 |||||||||||||| Sbjct: 151359 taaggcccctaaat 151372
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 2e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 443 atgaccgctcagtgataaagga 464 || | | || |||||||||||| Sbjct: 5585 atcaacactaagtgataaagga 5564 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 2e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 443 atgaccgctcagtgataaagga 464 || | | || |||||||||||| Sbjct: 212187 atcaacactaagtgataaagga 212208 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 2e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 274 bits (138), Expect = 2e-70 Identities = 138/138 (100%) Strand = Plus / Plus Query: 327 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 387 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 447 ccgctcagtgataaagga 464 |||||||||||||||||| Sbjct: 121 ccgctcagtgataaagga 138
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 2e-70 Identities = 256/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 46 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 105 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 188644 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 188703 Query: 106 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 165 ||||| ||||| |||||||| | | | |||||| |||||||||||||||| |||||||| Sbjct: 188704 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactaatgttgaa 188763 Query: 166 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 225 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 188764 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 188823 Query: 226 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 283 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 188824 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 188882 Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 336 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 188883 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 188935 Score = 266 bits (134), Expect = 6e-68 Identities = 255/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 46 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 105 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150201 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 150260 Query: 106 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 165 ||||| ||||| |||||||| | | | |||||| ||||||||| |||||| |||||||| Sbjct: 150261 ccatggccagggtgaagcttaggtaacactaagtggaggtccgagccgactaatgttgaa 150320 Query: 166 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 225 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 150321 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 150380 Query: 226 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 283 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 150381 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 150439 Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 336 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150440 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 433 aggcccctaaat 444 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 373 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 432 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 433 aggcccctaaat 444 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 9e-70 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 79 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 138 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 139 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 198 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 199 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 258 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 259 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 316 cgaggcaaactctgaatact 335 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 123 bits (62), Expect = 5e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 431 taaggcccctaaat 444 |||||||||||||| Sbjct: 1025 taaggcccctaaat 1038
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 9e-70 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 79 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 138 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 139 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 198 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 199 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 258 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 259 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 315 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 316 cgaggcaaactctgaatact 335 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 123 bits (62), Expect = 5e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 431 taaggcccctaaat 444 |||||||||||||| Sbjct: 2763 taaggcccctaaat 2776
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 1e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 87 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 88 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 147 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 148 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 207 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 208 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 264 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 265 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 324 actctgaatactagata 340 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 405 agagggaaacagcccggatcaccagctaaggcccctaaatg 445 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 268 bits (135), Expect = 1e-68 Identities = 260/300 (86%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcga--ttgtcactgcttatggacccgaacctgggtga 100 ||||||||| ||||| |||||||| | | |||||| ||| ||||||||||| |||||| Sbjct: 616 agcgaaagcaagtctgaatagggcaaaatcgtcactttttagggacccgaacccgggtga 675 Query: 101 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 160 |||| ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 676 tctaaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 735 Query: 161 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 220 ||||| |||| ||||||||| |||||||||||||||||||||| |||||| | ||||||| Sbjct: 736 ttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctag 795 Query: 221 ctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaa 277 |||||||||||||||||||||||||||||||| ||| ||| || |||||||||||| Sbjct: 796 ctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggggtaaa 855 Query: 278 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 337 |||||||||||||||||||| || || |||||||||||| ||||||| ||||||||| Sbjct: 856 gcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 99.6 bits (50), Expect = 8e-18 Identities = 83/94 (88%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 431 taaggcccctaaatgaccgctcagtgataaagga 464 ||||||||| |||| ||||| |||| ||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaagga 1026
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 1e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 87 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 88 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 147 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 148 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 207 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 208 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 264 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 265 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 324 actctgaatactagata 340 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 405 agagggaaacagcccggatcaccagctaaggcccctaaatg 445 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 6e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 46 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 105 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 106 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 165 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 166 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 225 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 226 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 282 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 283 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 |||||| ||| |||| | |||| |||||||||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaagga 660
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 6e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 269 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 330 aatactag 337 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 6e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 269 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 330 aatactag 337 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 431 taaggcccctaaatg 445 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 431 taaggcccctaaatg 445 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 6e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 265 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 266 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 325 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 326 tctgaatact 335 | ||||||| Sbjct: 924 taagaatact 933 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 367 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 426 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 427 cagctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||| |||| |||||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaagga 1045
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 6e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcga 318 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 443 at 444 || Sbjct: 356490 at 356491
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 443 atgaccgctcagtgataaagga 464 || | | || |||||||||||| Sbjct: 2137769 atcaacactaagtgataaagga 2137748 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 443 atgaccgctcagtgataaagga 464 || | | || |||||||||||| Sbjct: 477091 atcaacactaagtgataaagga 477112 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 1e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 46 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 105 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 106 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 165 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 166 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 225 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 226 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 282 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 283 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 |||||| ||| |||| | |||| | |||||||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaagga 660
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 443 atgaccgctcagtgataaagga 464 || | | || |||||||||||| Sbjct: 339020 atcaacactaagtgataaagga 338999 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 443 atgaccgctcagtgataaagga 464 || | | || |||||||||||| Sbjct: 132080 atcaacactaagtgataaagga 132059
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 1e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 1e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 37 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 94 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 215 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 271 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 272 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 330 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 331 atactagatatg 342 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 8e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 431 taaggcccctaaatg 445 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 9e-64 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 87 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 88 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 147 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 148 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 207 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 208 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 264 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 265 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 324 actctgaatactagata 340 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 405 agagggaaacagcccggatcaccagctaaggcccctaaatg 445 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 252 bits (127), Expect = 9e-64 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 71 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 130 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggta 2488 Query: 131 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 190 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2489 acactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattag 2548 Query: 191 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 250 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2549 gggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgca 2608 Query: 251 gcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggta 309 || ||||| | | | ||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 2609 gcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggta 2668 Query: 310 ccaaatcgaggcaaactctgaatacta 336 ||||||||||||||||||||||||||| Sbjct: 2669 ccaaatcgaggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 431 taaggcccctaaat 444 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 3e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 223 ggttctccccgaaatgcgttgaggcgcagc 252 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 330 aatac 334 ||||| Sbjct: 548 aatac 552 Score = 107 bits (54), Expect = 3e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 431 taaggcccctaaatgaccgctcagtgataaagga 464 ||||| ||| |||| ||| || ||||| |||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaagga 661
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 3e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 223 ggttctccccgaaatgcgttgaggcgcagc 252 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 |||||| ||| ||||||| ||| |||||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaagga 661 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 330 aatac 334 ||||| Sbjct: 548 aatac 552
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 3e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 91 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 269 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 270 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 328 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 329 gaatactagatatg 342 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 431 taaggcccctaaatg 445 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 3e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 3e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 3e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 3e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 141 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 200 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 201 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 260 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 261 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 317 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 318 aggcaaactctgaatactag 337 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 429 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 430 ctaaggcccctaaatga 446 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 70 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 125 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 3e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 91 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 269 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 270 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 328 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 329 gaatactagatatg 342 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 431 taaggcccctaaatg 445 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 1e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagc 252 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 430 ctaaggcccctaaatgaccgctcagtg 456 |||||||||| ||||||||||| |||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtg 1030 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 265 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 324 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 325 ctctgaatactagata 340 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 5e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 89 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 90 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 149 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 150 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 209 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 210 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 266 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 267 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 325 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 326 tctgaatactagatatg 342 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 391 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 445 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 246 bits (124), Expect = 5e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||| ||||||||||||||| ||||||||||| |||| | |||| ||||||||| Sbjct: 2841 ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttatagacccgaac 2900 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| ||||| |||||||||||||||| ||| || | | |||||||||||| Sbjct: 2901 ccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtggaggtccgaacc 2960 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 2961 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccc 3020 Query: 213 agagctagctggttctccccgaaatgcgttgaggcg 248 |||||||||||||||||||||||| |||| ||||| Sbjct: 3021 ggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 270 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 328 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 329 gaatac 334 |||||| Sbjct: 3139 gaatac 3144 Score = 83.8 bits (42), Expect = 5e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 443 atgaccgctcagtgataaagga 464 || | |||| |||||||||||| Sbjct: 3232 ataagcgctaagtgataaagga 3253
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 5e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 90 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 268 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 269 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 327 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 328 tgaatactagatat 341 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 405 agagggaaacagcccggatcaccagctaaggcccctaaatga 446 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 2e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 223 ggttctccccgaaatgcgttgaggcgcagcagttg 257 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 |||||| ||| ||||| ||||||||||| ||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaagga 663 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 330 aatac 334 ||||| Sbjct: 550 aatac 554
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 2e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 270 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 271 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 330 aatac 334 ||||| Sbjct: 547 aatac 551 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 |||||| ||| |||| | ||| |||||||||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaagga 660
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 2e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 270 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 271 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 330 aatactagat 339 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 405 agagggaaacagcccggatcaccagctaaggcccctaaatg 445 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 244 bits (123), Expect = 2e-61 Identities = 263/307 (85%), Gaps = 2/307 (0%) Strand = Plus / Minus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccga 90 ||||||||| || ||||||||| ||||||| ||| || ||||||| ||| ||||||| Sbjct: 39800 accggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccga 39741 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| || ||||||| ||||| |||| |||||||| | | | |||||| ||||| |||| Sbjct: 39740 acccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaa 39681 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 39680 ccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaat 39621 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-ta 269 || ||||||||||||||||||||||||||||| ||||||||| |||| || | || Sbjct: 39620 ccggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaactta 39561 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 39560 ggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctg 39501 Query: 330 aatacta 336 ||||||| Sbjct: 39500 aatacta 39494 Score = 244 bits (123), Expect = 2e-61 Identities = 263/307 (85%), Gaps = 2/307 (0%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccga 90 ||||||||| || ||||||||| ||||||| ||| || ||||||| ||| ||||||| Sbjct: 19600 accggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccga 19659 Query: 91 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 150 ||| || ||||||| ||||| |||| |||||||| | | | |||||| ||||| |||| Sbjct: 19660 acccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaa 19719 Query: 151 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 210 ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 19720 ccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaat 19779 Query: 211 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-ta 269 || ||||||||||||||||||||||||||||| ||||||||| |||| || | || Sbjct: 19780 ccggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaactta 19839 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 19840 ggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctg 19899 Query: 330 aatacta 336 ||||||| Sbjct: 19900 aatacta 19906 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 443 atgaccgctcagtgataaagga 464 || | ||| |||||||||||| Sbjct: 39408 ataattgctaagtgataaagga 39387 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 443 atgaccgctcagtgataaagga 464 || | ||| |||||||||||| Sbjct: 19992 ataattgctaagtgataaagga 20013
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 443 atgaccgctcagtgataaagga 464 || | |||| |||||||||||| Sbjct: 320614 attaacgctaagtgataaagga 320635 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcga 318 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 8e-61 Identities = 191/214 (89%) Strand = Plus / Minus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 8e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 443 atgaccgctcagtgataaagga 464 || | | || |||||||||||| Sbjct: 1775466 atcaacactaagtgataaagga 1775445 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 443 atgaccgctcagtgataaagga 464 || | | || |||||||||||| Sbjct: 376603 atcaacactaagtgataaagga 376624 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 443 atgaccgctcagtgataaagga 464 || | |||| |||||||||||| Sbjct: 3037 attaacgctaagtgataaagga 3058 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcga 318 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 443 atgaccgctcagtgataaagga 464 || | |||| |||||||||||| Sbjct: 3038 attaacgctaagtgataaagga 3059 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcga 318 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 8e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 443 at 444 || Sbjct: 3265 at 3266 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 8e-61 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 223 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 279 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 280 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 431 taaggcccctaaatga 446 ||||| ||| |||||| Sbjct: 626 taaggtccccaaatga 641
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 443 atgaccgctcagtgataaagga 464 || | |||| |||||||||||| Sbjct: 19843 attaacgctaagtgataaagga 19822 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcga 318 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 443 atgaccgctcagtgataaagga 464 || | |||| |||||||||||| Sbjct: 1597 attaacgctaagtgataaagga 1576 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcga 318 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 443 atgaccgctcagtgataaagga 464 || | |||| |||||||||||| Sbjct: 316103 attaacgctaagtgataaagga 316124 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcga 318 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 330 aatac 334 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 330 aatac 334 ||||| Sbjct: 1049320 aatac 1049316 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 430 ctaagg 435 |||||| Sbjct: 1659503 ctaagg 1659508 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 430 ctaagg 435 |||||| Sbjct: 1049241 ctaagg 1049236
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 8e-61 Identities = 191/214 (89%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 242 bits (122), Expect = 8e-61 Identities = 128/130 (98%) Strand = Plus / Plus Query: 335 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 394 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 395 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 454 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 455 tgataaagga 464 |||||||||| Sbjct: 19152950 tgataaagga 19152959
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 242 bits (122), Expect = 8e-61 Identities = 128/130 (98%) Strand = Plus / Plus Query: 335 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 394 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 395 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 454 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 455 tgataaagga 464 |||||||||| Sbjct: 76345 tgataaagga 76354
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 330 aatac 334 ||||| Sbjct: 1186 aatac 1190 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 430 ctaagg 435 |||||| Sbjct: 1265 ctaagg 1270
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Minus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 8e-61 Identities = 185/206 (89%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 223 ggttctccccgaaatgcgttgaggcg 248 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 330 aatac 334 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 330 aatac 334 ||||| Sbjct: 571559 aatac 571563 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 430 ctaagg 435 |||||| Sbjct: 2657283 ctaagg 2657278 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 430 ctaagg 435 |||||| Sbjct: 571638 ctaagg 571643
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 240 bits (121), Expect = 3e-60 Identities = 196/221 (88%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 ||||||||| ||| ||||||||| || ||||||||| ||||||||| |||| |||||||| Sbjct: 2370 accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggttatagacccgaa 2429 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || || ||||||| ||||| ||||| |||||||| | | | |||||| |||| |||||| Sbjct: 2430 cccggatgatctaaccatggccaggttgaagcttaggtaatactaagtggaggaccgaac 2489 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2490 cgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaatt 2549 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagc 252 | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2550 cggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 89.7 bits (45), Expect = 8e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 372 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 431 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 432 aaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||| | ||| |||||||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaagga 2783
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 240 bits (121), Expect = 3e-60 Identities = 263/308 (85%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 ||||||||| ||||||||| ||||| ||||||||| |||||||| |||||||||||||| Sbjct: 192493 accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttatggacccgaa 192552 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || | |||||||| ||||| |||||||||| ||||| | | || || || | |||||| Sbjct: 192553 cccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaac 192612 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| Sbjct: 192613 cgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaact 192672 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atct 268 | ||||||||||| ||||| ||||||| ||||||||||||| ||||| ||| | || | Sbjct: 192673 cggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctattt 192732 Query: 269 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 328 |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 192733 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaa 192792 Query: 329 gaatacta 336 |||||||| Sbjct: 192793 gaatacta 192800 Score = 240 bits (121), Expect = 3e-60 Identities = 263/308 (85%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 32 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 91 ||||||||| ||||||||| ||||| ||||||||| |||||||| |||||||||||||| Sbjct: 144289 accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttatggacccgaa 144230 Query: 92 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 151 || | |||||||| ||||| |||||||||| ||||| | | || || || | |||||| Sbjct: 144229 cccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaac 144170 Query: 152 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 211 |||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| Sbjct: 144169 cgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaact 144110 Query: 212 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atct 268 | ||||||||||| ||||| ||||||| ||||||||||||| ||||| ||| | || | Sbjct: 144109 cggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctattt 144050 Query: 269 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 328 |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 144049 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaa 143990 Query: 329 gaatacta 336 |||||||| Sbjct: 143989 gaatacta 143982 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 443 atgaccgctcagtg 456 ||| ||||| |||| Sbjct: 192890 atggccgctaagtg 192903 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 443 atgaccgctcagtg 456 ||| ||||| |||| Sbjct: 143892 atggccgctaagtg 143879
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 3e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 85 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 144 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 145 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 204 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 205 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 264 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 265 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 323 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 324 actctgaatacta 336 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 443 at 444 || Sbjct: 1470 at 1471
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 3e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 84 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 143 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 144 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 203 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 204 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 263 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 264 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 321 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 322 aaactctgaatactagatatg 342 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 369 ggccagtgagacgatgggggataagcttcat 399 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 238 bits (120), Expect = 1e-59 Identities = 262/307 (85%), Gaps = 3/307 (0%) Strand = Plus / Plus Query: 33 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 92 |||||||| ||||||||| ||||| ||||||||| |||||||| |||||||||||||| Sbjct: 663 ccggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttatggacccgaac 722 Query: 93 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 152 ||| |||||||| ||||| |||||||||| ||||| | | || || || | ||||||| Sbjct: 723 ctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatggaagaccgaacc 782 Query: 153 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 212 ||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | Sbjct: 783 gaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattccagtcgaactc 842 Query: 213 agagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggac-atcta 269 |||||||||||| ||||| ||||||| ||||||||||||| ||||| ||| | | || Sbjct: 843 agagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctagtta 902 Query: 270 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 329 ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | Sbjct: 903 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaag 962 Query: 330 aatacta 336 ||||||| Sbjct: 963 aatacta 969 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 383 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 442 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 443 atgaccgctcagtg 456 ||| ||||| |||| Sbjct: 1059 atggccgctaagtg 1072
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 238 bits (120), Expect = 1e-59 Identities = 256/302 (84%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| ||| ||||||||| | ||||| ||||| |||||| ||| |||||||||| Sbjct: 2324 ggagccatagtgaaagcgagcttgaatagagcgatagtcactatttacagacccgaaccc 2383 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 || ||||||| ||||| |||||||||| ||| | | | |||||| |||||||||||||| Sbjct: 2384 ggatgatctagccatggccaggatgaaacttaggtaacactaagtggaggtccgaaccga 2443 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||||||||||| ||||| |||||||| ||||| ||| |||||||| ||| ||||| | | Sbjct: 2444 ctgatgttgaaaaatcaacggatgagctgtggctagcggtgaaataccaatcgaattcgg 2503 Query: 215 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 274 |||||||||||||||||||||||||||||||||||||| ||||| | | ||||||| Sbjct: 2504 agctagctggttctccccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggt 2563 Query: 275 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 |||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||| Sbjct: 2564 aaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatac 2623 Query: 335 ta 336 || Sbjct: 2624 ta 2625 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 372 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 431 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 432 aaggcccctaaat 444 ||||||||||||| Sbjct: 2700 aaggcccctaaat 2712
>gb|DQ312633.1| Uncultured bacterium clone 3C6G 23S ribosomal RNA gene, partial sequence Length = 807 Score = 234 bits (118), Expect = 2e-58 Identities = 190/214 (88%) Strand = Plus / Plus Query: 35 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 94 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 95 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 154 |||||||||| ||||| |||||||||||||||| || || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggcgataccaagtggaggtccgaaccga 605 Query: 155 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 214 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 215 agctagctggttctccccgaaatgcgttgaggcg 248 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 284 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 334 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 737 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 787
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 234 bits (118), Expect = 2e-58 Identities = 256/300 (85%), Gaps = 4/300 (1%) Strand = Plus / Plus Query: 43 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 102 ||||||||||||||| | |||||| ||||| || ||| |||||||||| |||||||| Sbjct: 642 agcgaaagcgagtctgataagggcgtctgtcattggctatagacccgaacccgggtgatc 701 Query: 103 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 162 || || | ||||||||| ||||| | | |||||| ||||||||||||||| |||||| Sbjct: 702 taaccgcggtcaggatgaaacttgggtaagactaagtggaggtccgaaccgaccgatgtt 761 Query: 163 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 222 ||| |||| |||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 762 gaaaaatcggcggatgaactgtggttaggggtgaaatgccaatcgaactcggagctagct 821 Query: 223 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggaca-tctaggggtaaag 278 |||||||||||||||||||||||||||||| ||| || | | | |||||||||| || Sbjct: 822 ggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctaggggtagag 881 Query: 279 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 338 |||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 882 cactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaatactaga 941 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 370 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 429 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 430 ctaaggcccctaaatgaccgctcagtgataaagga 464 ||||||||||||||||| || |||||||||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaagga 1048
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 234 bits (118), Expect = 2e-58 Identities = 244/279 (87%), Gaps = 9/279 (3%) Strand = Plus / Plus Query: 70 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 129 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgggt 845 Query: 130 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 189 |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| |||||||| Sbjct: 846 aaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtta 905 Query: 190 ggggtgaaatgccactcgaacccagagctagctggttctccccg-aaatgcgttgaggcg 248 |||||||||||||| |||||| | ||||||||| |||||||||| ||||||||||| ||| Sbjct: 906 ggggtgaaatgccaatcgaactc-gagctagct-gttctccccgtaaatgcgttga-gcg 962 Query: 249 cagcagt---tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 303 |||| || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 963 cagcggttgatgacttgggctatctaggggtaaagcactgtttcggtgcgggctgcgaga 1022 Query: 304 gcggtaccaaatcgaggcaaactctgaatactagatatg 342 |||||||||||||| ||||||| ||||||||| |||| Sbjct: 1023 gcggtaccaaatcgtagcaaactaagaatactaggtatg 1061 Score = 123 bits (62), Expect = 5e-25 Identities = 81/86 (94%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 371 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 430 ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgtcgagagggaaaca-cccagatcaccagc 1131 Query: 431 taaggcccctaaatgaccgctcagtg 456 ||||||||||||||| ||||| |||| Sbjct: 1132 taaggcccctaaatggccgctaagtg 1157 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,613,342 Number of Sequences: 3902068 Number of extensions: 2613342 Number of successful extensions: 50857 Number of sequences better than 10.0: 2683 Number of HSP's better than 10.0 without gapping: 2700 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 37687 Number of HSP's gapped (non-prelim): 12689 length of query: 464 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 442 effective length of database: 17,147,199,772 effective search space: 7579062299224 effective search space used: 7579062299224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)