Clone Name | basdd11 |
---|---|
Clone Library Name | barley_pub |
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 65.1 bits (157), Expect = 4e-11 Identities = 29/57 (50%), Positives = 41/57 (71%) Frame = +1 Query: 64 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234 A EH+ C++ EG LCVNNCGFFGS+ATMN+CS C+ ++ +KQ+Q S+ +S Sbjct: 2 AEEHR---CETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVES 55
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 52.4 bits (124), Expect = 3e-07 Identities = 22/58 (37%), Positives = 35/58 (60%) Frame = +1 Query: 70 EHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVN 243 E ++ S P LCV CGFFGS + MN+CSKC++++ +EQ A ++ + +N Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLN 61
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 49.3 bits (116), Expect = 2e-06 Identities = 18/40 (45%), Positives = 29/40 (72%) Frame = +1 Query: 106 PILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASS 225 P LC N CGFFGS + MN+CSKC++ + +++Q +A ++ Sbjct: 16 PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAA 55
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 43.5 bits (101), Expect = 1e-04 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +1 Query: 103 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQA 207 GP+LC CGF+G+ T MCS C+KE +Q+ + Sbjct: 10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 43.5 bits (101), Expect = 1e-04 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +1 Query: 103 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQA 207 GP+LC CGF+G+ T MCS C+KE +Q+ + Sbjct: 10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +1 Query: 79 ETGCQSREGPILCVN-NCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234 +TG + P L CGF+GS+ TMN+CSKC + KQ A S+ S Sbjct: 3 DTGSERSNAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSS 55
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 39.3 bits (90), Expect = 0.003 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +1 Query: 127 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234 CGF+GS+ TMN+CSKC + KQ A S+ +S Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNS 55
>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated| exchange factor for Rab5) (Rabex-5) Length = 708 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = +1 Query: 13 PAEESRRGLPLIS*LTKAMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAM 192 PAE ++S +++ + G + +LC CG++G+ A CSKC +E Sbjct: 123 PAEGPLCQAQVVSRKKMSLKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYH 182 Query: 193 KQEQAKL 213 K Q ++ Sbjct: 183 KARQKQI 189
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 127 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234 CGF+GS+ TMN+CSKC + KQ S+ +S Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 127 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234 CGF+GS+ TMN+CSKC + KQ S+ +S Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55
>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 491 Score = 37.0 bits (84), Expect = 0.013 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +1 Query: 64 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 213 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 2 SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQI 51
>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 492 Score = 37.0 bits (84), Expect = 0.013 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +1 Query: 64 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 213 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 2 SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 51
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 34.7 bits (78), Expect = 0.063 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 112 LCVNNCGFFGSAATMNMCSKC 174 LC N+CGF G+ AT N+C C Sbjct: 21 LCANSCGFPGNPATQNLCQNC 41
>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 33.5 bits (75), Expect = 0.14 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 124 NCGFFGSAATMNMCSKCHKEMAMKQEQAKLA 216 NC F+G A T + CS C++E ++ +A+ A Sbjct: 894 NCAFYGRAETEHFCSYCYREELRRRREARAA 924
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 32.0 bits (71), Expect = 0.41 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 124 NCGFFGSAATMNMCSKCHKEMAMKQEQAK 210 NC F+G A T + CS C++E ++ +A+ Sbjct: 894 NCAFYGRAETEHYCSYCYREELRRRREAR 922
>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)| (Cellular zinc finger anti-NF-kappa B protein) (Zinc finger protein Cezanne) Length = 843 Score = 31.2 bits (69), Expect = 0.70 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 124 NCGFFGSAATMNMCSKCHKEMAMKQEQ 204 NC F+G T N CS C++E ++E+ Sbjct: 806 NCSFYGHPETNNFCSCCYREELRRRER 832
>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)| Length = 1687 Score = 28.9 bits (63), Expect = 3.5 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +1 Query: 40 PLIS*LTKAME-HKETGCQSREGPILCVNNCG 132 P I+ KA+ H TGCQ R P+LC CG Sbjct: 842 PFITRREKALNLHSRTGCQGRREPLLC-PECG 872
>AQP12_MOUSE (Q8CHJ2) Aquaporin-12A (AQP-12)| Length = 290 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = -1 Query: 281 LXAARCSFXASPPLTMLSKEEAASLACSCFXAISLWHLEHMFMVAALPKKPQLLT 117 L AA CS S T + + AC+ F +SL HL+H +V +P L+T Sbjct: 146 LMAAHCS---STLRTSVLQGMLVEGACTFFFHLSLLHLQHSLLVYRVPALALLVT 197
>SCR23_ARATH (P82642) Protein SCRL23 precursor| Length = 95 Score = 28.1 bits (61), Expect = 5.9 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 2/73 (2%) Frame = +1 Query: 55 LTKAMEHKETGCQSRE--GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSF 228 L +E E G E IL CGF G KC+KEM K +Q L Sbjct: 17 LLSLVEESEAGAPPVECWSEILFSGKCGFHGK-------KKCYKEMESKLKQRVLKCRCE 69 Query: 229 DSIVNGGDAXKEH 267 D + + EH Sbjct: 70 DVKKDSNTSKDEH 82
>FTSK_CHLTR (O84744) DNA translocase ftsK| Length = 799 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -1 Query: 245 PLTMLSKEEAASLACSCFXAISLWHLEH 162 P T+ + + LA +CF +SLW +H Sbjct: 14 PQTVFAVKTCVYLALACFSGLSLWSFQH 41
>APTE_DROME (P29673) Protein apterous| Length = 469 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +1 Query: 76 KETGCQSREGPILCVNN-CGFFGSAATMNMCSKC 174 +E+ C SR+G I C N+ FFG+ CS+C Sbjct: 184 RESSCYSRDGNIYCKNDYYSFFGT----RRCSRC 213 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,957,305 Number of Sequences: 219361 Number of extensions: 622590 Number of successful extensions: 1811 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1811 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)