ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdd11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing ... 65 4e-11
2ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing ... 52 3e-07
3ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing ... 49 2e-06
4Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2... 44 1e-04
5Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2... 44 1e-04
6ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog 40 0.001
7ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expr... 39 0.003
8RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-as... 39 0.004
9ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expres... 38 0.007
10ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expr... 38 0.007
11RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5) 37 0.013
12RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5) 37 0.013
13ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger prot... 35 0.063
14CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? ... 33 0.14
15CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? ... 32 0.41
16CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 ... 31 0.70
17ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654) 29 3.5
18AQP12_MOUSE (Q8CHJ2) Aquaporin-12A (AQP-12) 28 4.5
19SCR23_ARATH (P82642) Protein SCRL23 precursor 28 5.9
20FTSK_CHLTR (O84744) DNA translocase ftsK 28 5.9
21APTE_DROME (P29673) Protein apterous 28 5.9

>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein|
           At2g36320
          Length = 161

 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 29/57 (50%), Positives = 41/57 (71%)
 Frame = +1

Query: 64  AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234
           A EH+   C++ EG  LCVNNCGFFGS+ATMN+CS C+ ++ +KQ+Q     S+ +S
Sbjct: 2   AEEHR---CETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVES 55



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>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein|
           At1g12440
          Length = 168

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 22/58 (37%), Positives = 35/58 (60%)
 Frame = +1

Query: 70  EHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVN 243
           E  ++   S   P LCV  CGFFGS + MN+CSKC++++   +EQ   A ++ +  +N
Sbjct: 4   EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLN 61



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>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein|
           At4g12040
          Length = 175

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 18/40 (45%), Positives = 29/40 (72%)
 Frame = +1

Query: 106 PILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASS 225
           P LC N CGFFGS + MN+CSKC++ +  +++Q  +A ++
Sbjct: 16  PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAA 55



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>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 103 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQA 207
           GP+LC   CGF+G+  T  MCS C+KE   +Q+ +
Sbjct: 10  GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44



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>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 103 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQA 207
           GP+LC   CGF+G+  T  MCS C+KE   +Q+ +
Sbjct: 10  GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44



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>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog|
          Length = 226

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 79  ETGCQSREGPILCVN-NCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234
           +TG +    P L     CGF+GS+ TMN+CSKC  +   KQ     A S+  S
Sbjct: 3   DTGSERSNAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSS 55



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>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 127 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234
           CGF+GS+ TMN+CSKC  +   KQ     A S+ +S
Sbjct: 20  CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNS 55



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>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated|
           exchange factor for Rab5) (Rabex-5)
          Length = 708

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +1

Query: 13  PAEESRRGLPLIS*LTKAMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAM 192
           PAE       ++S    +++ +  G    +  +LC   CG++G+ A    CSKC +E   
Sbjct: 123 PAEGPLCQAQVVSRKKMSLKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYH 182

Query: 193 KQEQAKL 213
           K  Q ++
Sbjct: 183 KARQKQI 189



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>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 127 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234
           CGF+GS+ TMN+CSKC  +   KQ       S+ +S
Sbjct: 20  CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55



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>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 127 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 234
           CGF+GS+ TMN+CSKC  +   KQ       S+ +S
Sbjct: 20  CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55



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>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)|
          Length = 491

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 64  AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 213
           +++ +  G    +  +LC   CG++G+ A    CSKC +E   K  Q ++
Sbjct: 2   SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQI 51



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>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)|
          Length = 492

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 64  AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 213
           +++ +  G    +  +LC   CG++G+ A    CSKC +E   K  Q ++
Sbjct: 2   SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 51



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>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1|
           (Stress-associated protein 1) (OsISAP1)
          Length = 164

 Score = 34.7 bits (78), Expect = 0.063
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 112 LCVNNCGFFGSAATMNMCSKC 174
           LC N+CGF G+ AT N+C  C
Sbjct: 21  LCANSCGFPGNPATQNLCQNC 41



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>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)|
           (Zinc finger protein Cezanne 2) (OTU domain-containing
           protein 7)
          Length = 926

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 124 NCGFFGSAATMNMCSKCHKEMAMKQEQAKLA 216
           NC F+G A T + CS C++E   ++ +A+ A
Sbjct: 894 NCAFYGRAETEHFCSYCYREELRRRREARAA 924



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>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)|
           (Zinc finger protein Cezanne 2) (OTU domain-containing
           protein 7)
          Length = 926

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 124 NCGFFGSAATMNMCSKCHKEMAMKQEQAK 210
           NC F+G A T + CS C++E   ++ +A+
Sbjct: 894 NCAFYGRAETEHYCSYCYREELRRRREAR 922



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>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)|
           (Cellular zinc finger anti-NF-kappa B protein) (Zinc
           finger protein Cezanne)
          Length = 843

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 124 NCGFFGSAATMNMCSKCHKEMAMKQEQ 204
           NC F+G   T N CS C++E   ++E+
Sbjct: 806 NCSFYGHPETNNFCSCCYREELRRRER 832



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>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)|
          Length = 1687

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 40  PLIS*LTKAME-HKETGCQSREGPILCVNNCG 132
           P I+   KA+  H  TGCQ R  P+LC   CG
Sbjct: 842 PFITRREKALNLHSRTGCQGRREPLLC-PECG 872



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>AQP12_MOUSE (Q8CHJ2) Aquaporin-12A (AQP-12)|
          Length = 290

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -1

Query: 281 LXAARCSFXASPPLTMLSKEEAASLACSCFXAISLWHLEHMFMVAALPKKPQLLT 117
           L AA CS   S   T + +      AC+ F  +SL HL+H  +V  +P    L+T
Sbjct: 146 LMAAHCS---STLRTSVLQGMLVEGACTFFFHLSLLHLQHSLLVYRVPALALLVT 197



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>SCR23_ARATH (P82642) Protein SCRL23 precursor|
          Length = 95

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
 Frame = +1

Query: 55  LTKAMEHKETGCQSRE--GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSF 228
           L   +E  E G    E    IL    CGF G         KC+KEM  K +Q  L     
Sbjct: 17  LLSLVEESEAGAPPVECWSEILFSGKCGFHGK-------KKCYKEMESKLKQRVLKCRCE 69

Query: 229 DSIVNGGDAXKEH 267
           D   +   +  EH
Sbjct: 70  DVKKDSNTSKDEH 82



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>FTSK_CHLTR (O84744) DNA translocase ftsK|
          Length = 799

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 245 PLTMLSKEEAASLACSCFXAISLWHLEH 162
           P T+ + +    LA +CF  +SLW  +H
Sbjct: 14  PQTVFAVKTCVYLALACFSGLSLWSFQH 41



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>APTE_DROME (P29673) Protein apterous|
          Length = 469

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 76  KETGCQSREGPILCVNN-CGFFGSAATMNMCSKC 174
           +E+ C SR+G I C N+   FFG+      CS+C
Sbjct: 184 RESSCYSRDGNIYCKNDYYSFFGT----RRCSRC 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,957,305
Number of Sequences: 219361
Number of extensions: 622590
Number of successful extensions: 1811
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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