ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdd11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G8... 206 3e-50
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 206 3e-50
3dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic D... 206 3e-50
4dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic D... 206 3e-50
5dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 3e-50
6dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 3e-50
7dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 3e-50
8dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 3e-50
9dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 3e-50
10gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-assoc... 198 7e-48
11gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complet... 192 4e-46
12gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, ... 188 7e-45
13gb|AY109331.1| Zea mays CL253_2 mRNA sequence 186 3e-44
14gb|BT016379.1| Zea mays clone Contig212 mRNA sequence 184 1e-43
15ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group... 180 2e-42
16ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA 180 2e-42
17dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 180 2e-42
19dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 180 2e-42
20dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
21dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic D... 157 2e-35
22gb|AY105966.1| Zea mays PCO143261 mRNA sequence 157 2e-35
23gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence 145 9e-32
24gb|AY105867.1| Zea mays PCO143262 mRNA sequence 141 1e-30
25dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone... 78 2e-11
26ref|NM_103998.2| Arabidopsis thaliana DNA binding / zinc ion bin... 54 3e-04
27gb|BT015115.1| Arabidopsis thaliana At1g51200 gene, complete cds 54 3e-04
28gb|AY056445.1| Arabidopsis thaliana At1g51200/F11M15_6 mRNA, com... 54 3e-04
29emb|BX813820.1|CNS0AC5X Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
30emb|BX841767.1|CNS09Y63 Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
31gb|BT001984.1| Arabidopsis thaliana expressed protein (At1g51200... 54 3e-04
32gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 geno... 54 3e-04
33ref|XM_482578.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.016
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
36dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
37dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
38gb|BT014337.1| Lycopersicon esculentum clone 133610F, mRNA sequence 42 0.99
39gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of ... 40 3.9
40gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-6... 40 3.9

>gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G81 mRNA sequence
          Length = 449

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 51  aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 110

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 111 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 170

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 171 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 230

                  
Query: 242 acggtgg 248
           | |||||
Sbjct: 231 atggtgg 237



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                            
Query: 62       aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
                |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 24109401 aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 24109460

                                                                            
Query: 122      ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
                |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 24109461 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 24109520

                                                                            
Query: 182      agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
                |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 24109521 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 24109580

                       
Query: 242      acggtgg 248
                | |||||
Sbjct: 24109581 atggtgg 24109587



to top

>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0417G12
          Length = 163568

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                         
Query: 62    aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
             |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 42859 aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 42918

                                                                         
Query: 122   ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
             |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 42919 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 42978

                                                                         
Query: 182   agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
             |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 42979 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 43038

                    
Query: 242   acggtgg 248
             | |||||
Sbjct: 43039 atggtgg 43045



to top

>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0429G06
          Length = 158321

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                          
Query: 62     aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
              |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 119094 aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 119153

                                                                          
Query: 122    ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
              |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 119154 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 119213

                                                                          
Query: 182    agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
              |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 119214 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 119273

                     
Query: 242    acggtgg 248
              | |||||
Sbjct: 119274 atggtgg 119280



to top

>dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D03, full
           insert sequence
          Length = 999

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 145 aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 204

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 205 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 264

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 265 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 324

                  
Query: 242 acggtgg 248
           | |||||
Sbjct: 325 atggtgg 331



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                       
Query: 1  cctaggggatcgccggcagaggaatcgcg 29
          |||||||||||||||| ||||||||||||
Sbjct: 69 cctaggggatcgccgg-agaggaatcgcg 96



to top

>dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A12, full
           insert sequence
          Length = 1009

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 145 aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 204

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 205 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 264

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 265 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 324

                  
Query: 242 acggtgg 248
           | |||||
Sbjct: 325 atggtgg 331



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                       
Query: 1  cctaggggatcgccggcagaggaatcgcg 29
          |||||||||||||||| ||||||||||||
Sbjct: 69 cctaggggatcgccgg-agaggaatcgcg 96



to top

>dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C11, full
           insert sequence
          Length = 1000

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 146 aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 205

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 206 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 265

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 266 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 325

                  
Query: 242 acggtgg 248
           | |||||
Sbjct: 326 atggtgg 332



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                       
Query: 1  cctaggggatcgccggcagaggaatcgcg 29
          |||||||||||||||| ||||||||||||
Sbjct: 70 cctaggggatcgccgg-agaggaatcgcg 97



to top

>dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026K20, full
           insert sequence
          Length = 1209

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 143 aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 202

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 203 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 262

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 263 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 322

                  
Query: 242 acggtgg 248
           | |||||
Sbjct: 323 atggtgg 329



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                       
Query: 1  cctaggggatcgccggcagaggaatcgcg 29
          |||||||||||||||| ||||||||||||
Sbjct: 67 cctaggggatcgccgg-agaggaatcgcg 94



to top

>dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C08, full
           insert sequence
          Length = 1021

 Score =  206 bits (104), Expect = 3e-50
 Identities = 166/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||||| || ||||||   |  || || |||||||||||| |||
Sbjct: 142 aagccatggagcacaaggagactggatgccagcagccagaaggcccgatcctttgcatca 201

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 202 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 261

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 262 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 321

                  
Query: 242 acggtgg 248
           | |||||
Sbjct: 322 atggtgg 328



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                       
Query: 1  cctaggggatcgccggcagaggaatcgcg 29
          |||||||||||||||| ||||||||||||
Sbjct: 66 cctaggggatcgccgg-agaggaatcgcg 93



to top

>gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3
           (SAP-3) mRNA, complete cds
          Length = 1132

 Score =  198 bits (100), Expect = 7e-48
 Identities = 165/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||||| || ||||||   |   | || |||||||||||| |||
Sbjct: 56  aagccatggagcacaaggagactggatgccagcagccaaaaggcccgatcctttgcatca 115

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 116 ataactgcggcttctttggcagtgcggctaccatgaacatgtgctcaaagtgccacaagg 175

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   |||||||||||||||||||||||||| ||||||||| | |||||||| ||||
Sbjct: 176 agatgataatgaagcaggagcaggccaagctggcagcctcctctatcgacagcattgtca 235

                  
Query: 242 acggtgg 248
           | |||||
Sbjct: 236 atggtgg 242



to top

>gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complete cds
          Length = 1000

 Score =  192 bits (97), Expect = 4e-46
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||| | || |||||| | |  ||||| || ||||| ||| |||
Sbjct: 86  aagccatggagcacaaggaggctgggtgccaggcccccgagggacccatcctctgcatca 145

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ataactgtggcttcttcggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 205

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   | ||||||||| |||||||||||||| ||||||||| | ||||||||||| |
Sbjct: 206 agatgataacgaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgtga 265

               
Query: 242 acgg 245
           ||||
Sbjct: 266 acgg 269



to top

>gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, complete cds
          Length = 1162

 Score =  188 bits (95), Expect = 7e-45
 Identities = 157/178 (88%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||| | || |||||| | |  ||||| || ||||| ||| |||
Sbjct: 278 aagccatggagcacaaggaggctgggtgccaggcccccgagggacccatcctctgcatca 337

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ataactgtggcttcttcggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 397

                                                                     
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgt 239
           |||||   | ||||||||| |||||||||||||| ||||||||| | |||||||||||
Sbjct: 398 agatgataacgaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgt 455



to top

>gb|AY109331.1| Zea mays CL253_2 mRNA sequence
          Length = 2256

 Score =  186 bits (94), Expect = 3e-44
 Identities = 160/184 (86%)
 Strand = Plus / Plus

                                                                        
Query: 62   aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
            |||||||||||||||||||| | || ||||||      ||||| || ||||| ||| |||
Sbjct: 1082 aagccatggagcacaaggaggctgggtgccaggnnnnngagggacccatcctctgcatca 1141

                                                                        
Query: 122  ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
            ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 ataactgtggcttcttcggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 1201

                                                                        
Query: 182  agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
            |||||   | ||||||||| |||||||||||||| ||||||||| | ||||||||||| |
Sbjct: 1202 agatgataacgaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgtga 1261

                
Query: 242  acgg 245
            ||||
Sbjct: 1262 acgg 1265



to top

>gb|BT016379.1| Zea mays clone Contig212 mRNA sequence
          Length = 1020

 Score =  184 bits (93), Expect = 1e-43
 Identities = 161/184 (87%)
 Strand = Plus / Plus

                                                                       
Query: 62  aagccatggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtca 121
           |||||||||||||||||||| | || |||||| | |  ||||| || ||||| ||| |||
Sbjct: 102 aagccatggagcacaaggaggctgggtgccaggcccccgagggacccatcctctgcatca 161

                                                                       
Query: 122 ataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagg 181
           ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 162 ataactgtggcttcttcggcagcgcggcgaccatgaacatgtgctctaagtgccacaagg 221

                                                                       
Query: 182 agatggcnatgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtca 241
           |||||   | ||||||||| |||||||||||||| ||||||||| | ||||||||||| |
Sbjct: 222 agatgataacgaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgtga 281

               
Query: 242 acgg 245
           ||||
Sbjct: 282 acgg 285



to top

>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15
           mRNA
          Length = 1000

 Score =  180 bits (91), Expect = 2e-42
 Identities = 141/158 (89%)
 Strand = Plus / Plus

                                                                       
Query: 67  atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
           ||||| ||||||||| | |||||||||   |  ||||| || ||||||||| ||||||||
Sbjct: 161 atggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataac 220

                                                                       
Query: 127 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 280

                                                 
Query: 187 gcnatgaagcaggagcaggccaagctggccgcctcctc 224
              |||||| |||||||||||||||| || ||||||||
Sbjct: 281 atcatgaaggaggagcaggccaagcttgctgcctcctc 318



to top

>ref|XM_464458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 991

 Score =  180 bits (91), Expect = 2e-42
 Identities = 141/158 (89%)
 Strand = Plus / Plus

                                                                       
Query: 67  atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
           ||||| ||||||||| | |||||||||   |  ||||| || ||||||||| ||||||||
Sbjct: 144 atggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataac 203

                                                                       
Query: 127 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 263

                                                 
Query: 187 gcnatgaagcaggagcaggccaagctggccgcctcctc 224
              |||||| |||||||||||||||| || ||||||||
Sbjct: 264 atcatgaaggaggagcaggccaagcttgctgcctcctc 301



to top

>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full
           insert sequence
          Length = 991

 Score =  180 bits (91), Expect = 2e-42
 Identities = 141/158 (89%)
 Strand = Plus / Plus

                                                                       
Query: 67  atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
           ||||| ||||||||| | |||||||||   |  ||||| || ||||||||| ||||||||
Sbjct: 144 atggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataac 203

                                                                       
Query: 127 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 263

                                                 
Query: 187 gcnatgaagcaggagcaggccaagctggccgcctcctc 224
              |||||| |||||||||||||||| || ||||||||
Sbjct: 264 atcatgaaggaggagcaggccaagcttgctgcctcctc 301



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  180 bits (91), Expect = 2e-42
 Identities = 141/158 (89%)
 Strand = Plus / Minus

                                                                           
Query: 67      atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
               ||||| ||||||||| | |||||||||   |  ||||| || ||||||||| ||||||||
Sbjct: 5346557 atggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataac 5346498

                                                                           
Query: 127     tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5346497 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 5346438

                                                     
Query: 187     gcnatgaagcaggagcaggccaagctggccgcctcctc 224
                  |||||| |||||||||||||||| || ||||||||
Sbjct: 5346437 atcatgaaggaggagcaggccaagcttgctgcctcctc 5346400



to top

>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1225_F07
          Length = 142772

 Score =  180 bits (91), Expect = 2e-42
 Identities = 141/158 (89%)
 Strand = Plus / Minus

                                                                         
Query: 67    atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
             ||||| ||||||||| | |||||||||   |  ||||| || ||||||||| ||||||||
Sbjct: 72860 atggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataac 72801

                                                                         
Query: 127   tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72800 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 72741

                                                   
Query: 187   gcnatgaagcaggagcaggccaagctggccgcctcctc 224
                |||||| |||||||||||||||| || ||||||||
Sbjct: 72740 atcatgaaggaggagcaggccaagcttgctgcctcctc 72703



to top

>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full
           insert sequence
          Length = 1000

 Score =  180 bits (91), Expect = 2e-42
 Identities = 141/158 (89%)
 Strand = Plus / Plus

                                                                       
Query: 67  atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
           ||||| ||||||||| | |||||||||   |  ||||| || ||||||||| ||||||||
Sbjct: 161 atggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataac 220

                                                                       
Query: 127 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 280

                                                 
Query: 187 gcnatgaagcaggagcaggccaagctggccgcctcctc 224
              |||||| |||||||||||||||| || ||||||||
Sbjct: 281 atcatgaaggaggagcaggccaagcttgctgcctcctc 318



to top

>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1524_D08
          Length = 143046

 Score =  157 bits (79), Expect = 2e-35
 Identities = 123/138 (89%)
 Strand = Plus / Minus

                                                                       
Query: 67  atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
           ||||| ||||||||| | |||||||||   |  ||||| || ||||||||| ||||||||
Sbjct: 138 atggaacacaaggaggctggctgccagcagcccgagggcccaatcctttgcatcaataac 79

                                                                       
Query: 127 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 19

                             
Query: 187 gcnatgaagcaggagcag 204
              |||||| ||||||||
Sbjct: 18  atcatgaaggaggagcag 1



to top

>gb|AY105966.1| Zea mays PCO143261 mRNA sequence
          Length = 1035

 Score =  157 bits (79), Expect = 2e-35
 Identities = 138/158 (87%)
 Strand = Plus / Plus

                                                                       
Query: 67  atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
           ||||| ||||||||| |||||||||||   | |||||| || ||||| ||| ||||||||
Sbjct: 90  atggaacacaaggaggcgggctgccagcagccggagggcccaatcctatgcatcaataac 149

                                                                       
Query: 127 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
           ||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 150 tgcggcttcttcggcagtgctgcgacgatgaacatgtgctccaagtgccacaaggagatg 209

                                                 
Query: 187 gcnatgaagcaggagcaggccaagctggccgcctcctc 224
              | |||||||||||||||| ||||||| ||||||||
Sbjct: 210 ataacgaagcaggagcaggcccagctggctgcctcctc 247



to top

>gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence
          Length = 941

 Score =  145 bits (73), Expect = 9e-32
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                       
Query: 130 ggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatggcn 189
           |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||   
Sbjct: 176 ggcttcttcggcagcgcggcgaccatgaacatgtgctctaagtgccacaaggagatgata 235

                                                                   
Query: 190 atgaagcaggagcaggccaagctggccgcctcctcttttgacagcatcgtcaacgg 245
           | ||||||||| |||||||||||||| ||||||||| | ||||||||||| |||||
Sbjct: 236 acgaagcaggatcaggccaagctggctgcctcctctatcgacagcatcgtgaacgg 291



to top

>gb|AY105867.1| Zea mays PCO143262 mRNA sequence
          Length = 984

 Score =  141 bits (71), Expect = 1e-30
 Identities = 136/158 (86%)
 Strand = Plus / Plus

                                                                       
Query: 67  atggagcacaaggagacgggctgccagtcacgggagggtccgatcctttgcgtcaataac 126
           ||||| ||||||||| | |||||||||   | |||||| || ||||| ||| ||||||||
Sbjct: 89  atggaacacaaggaggccggctgccagcagccggagggcccaatcctatgcatcaataac 148

                                                                       
Query: 127 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaaggagatg 186
           || || |||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgtggtttctttggaagcgctgccaccatgaacatgtgctccaagtgccacaaggagatg 208

                                                 
Query: 187 gcnatgaagcaggagcaggccaagctggccgcctcctc 224
              |||||||||||||||||| || |||| ||||||||
Sbjct: 209 ataatgaagcaggagcaggcccagttggctgcctcctc 246



to top

>dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45A23, TM0318,
             complete sequence
          Length = 117676

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 115   tgcgtcaataactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
             ||||||||||| || || |||||||| || ||||| |||||||||||||| |||||||| 
Sbjct: 54633 tgcgtcaataattgtggtttctttggaagggcggctaccatgaacatgtgttccaagtgt 54574

                                                   
Query: 175   cacaaggagatggcnatgaagcaggagcaggccaagct 212
              ||||||| |||    ||||||||||||||| ||||||
Sbjct: 54573 tacaaggacatgctattgaagcaggagcaggacaagct 54536



to top

>ref|NM_103998.2| Arabidopsis thaliana DNA binding / zinc ion binding AT1G51200 mRNA,
           complete cds
          Length = 1035

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 124 aactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagga 182
           |||||||| |||||||| ||||| || || ||||||||||| || ||||| ||||||||
Sbjct: 217 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 275



to top

>gb|BT015115.1| Arabidopsis thaliana At1g51200 gene, complete cds
          Length = 522

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 124 aactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagga 182
           |||||||| |||||||| ||||| || || ||||||||||| || ||||| ||||||||
Sbjct: 61  aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 119



to top

>gb|AY056445.1| Arabidopsis thaliana At1g51200/F11M15_6 mRNA, complete cds
          Length = 898

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 124 aactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagga 182
           |||||||| |||||||| ||||| || || ||||||||||| || ||||| ||||||||
Sbjct: 209 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 267



to top

>emb|BX813820.1|CNS0AC5X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB41ZA07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 933

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 124 aactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagga 182
           |||||||| |||||||| ||||| || || ||||||||||| || ||||| ||||||||
Sbjct: 133 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 191



to top

>emb|BX841767.1|CNS09Y63 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB16ZD06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 969

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 124 aactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagga 182
           |||||||| |||||||| ||||| || || ||||||||||| || ||||| ||||||||
Sbjct: 191 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 249



to top

>gb|BT001984.1| Arabidopsis thaliana expressed protein (At1g51200) mRNA, complete
           cds
          Length = 1032

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 124 aactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagga 182
           |||||||| |||||||| ||||| || || ||||||||||| || ||||| ||||||||
Sbjct: 214 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 272



to top

>gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 genomic sequence, complete
             sequence
          Length = 105807

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 124   aactgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgccacaagga 182
             |||||||| |||||||| ||||| || || ||||||||||| || ||||| ||||||||
Sbjct: 38341 aactgcggtttctttggaagcgctgccacaatgaacatgtgttctaagtgtcacaagga 38399



to top

>ref|XM_482578.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 675

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 127 tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
           ||||||||||| ||||||| |||||||| |||  | ||||||||||||
Sbjct: 73  tgcggcttcttcggcagcgaggcgaccaagaagctctgctccaagtgc 120



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 126 ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
           |||||| ||||| ||||||  || |||||  ||||||||||||||||||
Sbjct: 252 ctgcgggttcttcggcagcaaggagaccaacaacatgtgctccaagtgc 300



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 127      tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
                ||||| ||||| ||||||| |||||||| |||| | ||||||||||||
Sbjct: 16957964 tgcgggttcttcggcagcgaggcgaccaagaacctctgctccaagtgc 16958011



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 150      gaccatgaacatgtgctccaagtgc 174
                ||||| |||||||||||||||||||
Sbjct: 16958170 gaccaagaacatgtgctccaagtgc 16958194



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 127      tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
                ||||||||||| ||||||| |||||||| |||  | ||||||||||||
Sbjct: 21198319 tgcggcttcttcggcagcgaggcgaccaagaagctctgctccaagtgc 21198366



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 126      ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
                |||||| ||||| ||||||  || |||||  ||||||||||||||||||
Sbjct: 21198498 ctgcgggttcttcggcagcaaggagaccaacaacatgtgctccaagtgc 21198546



to top

>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 127   tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
             ||||| ||||| ||||||| |||||||| |||| | ||||||||||||
Sbjct: 87777 tgcgggttcttcggcagcgaggcgaccaagaacctctgctccaagtgc 87824



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 150   gaccatgaacatgtgctccaagtgc 174
             ||||| |||||||||||||||||||
Sbjct: 87983 gaccaagaacatgtgctccaagtgc 88007



to top

>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016C11
          Length = 170723

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 127   tgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
             ||||||||||| ||||||| |||||||| |||  | ||||||||||||
Sbjct: 24596 tgcggcttcttcggcagcgaggcgaccaagaagctctgctccaagtgc 24643



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 126   ctgcggcttctttggcagcgcggcgaccatgaacatgtgctccaagtgc 174
             |||||| ||||| ||||||  || |||||  ||||||||||||||||||
Sbjct: 24775 ctgcgggttcttcggcagcaaggagaccaacaacatgtgctccaagtgc 24823



to top

>gb|BT014337.1| Lycopersicon esculentum clone 133610F, mRNA sequence
          Length = 1026

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 154 atgaacatgtgctccaagtgccacaagga 182
           |||||||||||||| |||||| |||||||
Sbjct: 114 atgaacatgtgctcaaagtgctacaagga 142



to top

>gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of the complete genome
          Length = 10329

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  agcaggccaagctggccgcc 219
            ||||||||||||||||||||
Sbjct: 2795 agcaggccaagctggccgcc 2776



to top

>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence
          Length = 100208

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 151   accatgaacatgtgctccaagtgccacaagga 182
             |||||||||||||| ||||||||  |||||||
Sbjct: 14137 accatgaacatgtgttccaagtgttacaagga 14168


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,054,027
Number of Sequences: 3902068
Number of extensions: 2054027
Number of successful extensions: 37812
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37699
Number of HSP's gapped (non-prelim): 113
length of query: 299
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 277
effective length of database: 17,147,199,772
effective search space: 4749774336844
effective search space used: 4749774336844
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top