>SLT11_CRYNE (Q5KND3) Pre-mRNA-splicing factor SLT11|
          Length = 326

 Score =  167 bits (423), Expect = 1e-41
 Identities = 81/154 (52%), Positives = 100/154 (64%), Gaps = 3/154 (1%)
 Frame = +3

Query: 30  DAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKT 209
           D    G E SDFPI+CE+CLG NPYVRM + E+  ECK+C RPFTVFRW PG + R KKT
Sbjct: 6   DINKVGVESSDFPILCETCLGPNPYVRMNKQEFGHECKVCNRPFTVFRWNPG-EGRMKKT 64

Query: 210 EICXTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAEEHDRKAA 389
           EIC TC K+K VCQ CLLDLE+GLP QVRD ALA  +    P SD+N++Y+ +  + + A
Sbjct: 65  EICTTCAKIKGVCQTCLLDLEFGLPTQVRDAALARKAQ--APSSDINKQYYIQNLEAQMA 122

Query: 390 A---GIDYDSSYGKAXXNDTILXLXXTXPYYXRN 482
               G+ YDS        + +  L  T PYY RN
Sbjct: 123 ESPDGLAYDSEVANRAGREMLKNLARTDPYYKRN 156

>SLT11_ASPFU (Q4W9V0) Pre-mRNA-splicing factor slt11|
          Length = 383

 Score =  162 bits (410), Expect = 5e-40
 Identities = 73/156 (46%), Positives = 102/156 (65%), Gaps = 2/156 (1%)
 Frame = +3

Query: 18  RLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDAR 197
           ++ +D    GWE +DFP +CE+CL DNPYV+ML+ +Y  ECKIC RPFT+FRW+  R AR
Sbjct: 5   QIKQDLNRSGWESTDFPSVCENCLPDNPYVQMLKEDYGAECKICTRPFTIFRWKADRTAR 64

Query: 198 YKKTEICXTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAEEHD 377
            K+T IC TC +LKN CQ C+LDL +GLP+ VRD AL + +    P S +NREY+A+EH+
Sbjct: 65  TKRTTICLTCARLKNCCQCCMLDLSFGLPIVVRDAALKMVAPG--PESSINREYYAQEHE 122

Query: 378 RKAAAGIDYDSSYGKA--XXNDTILXLXXTXPYYXR 479
           ++   G     +Y K      + +  L  + PYY +
Sbjct: 123 KEIQEGRGAVEAYEKTDEKARELLRRLANSEPYYRK 158

>SLT11_EMENI (Q5AX35) Pre-mRNA-splicing factor slt11|
          Length = 385

 Score =  159 bits (402), Expect = 4e-39
 Identities = 72/159 (45%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
 Frame = +3

Query: 9   MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 188
           M  ++ +D    GWE +DFP +CE+CL +NPYV+ML+ +Y  ECKIC RPFT+FRW+  R
Sbjct: 1   MPPQIKQDLNRSGWETTDFPSVCENCLPENPYVQMLKEDYGAECKICTRPFTIFRWKADR 60

Query: 189 DARYKKTEICXTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAE 368
            AR K+T IC TC +LKN CQ C+LDL +GLP+ VRD AL + +    P+S +NREY+A+
Sbjct: 61  TARTKRTNICLTCARLKNCCQCCMLDLSFGLPIVVRDAALKMVAPG--PQSSINREYYAQ 118

Query: 369 EHDRKAAAGIDYDSSYGKA--XXNDTILXLXXTXPYYXR 479
            H+++   G      Y K      + +  L  + PYY +
Sbjct: 119 GHEKEIEEGRGAVEEYEKTDEKARELLRRLANSEPYYRK 157

>SLT11_USTMA (Q4PGU6) Pre-mRNA-splicing factor SLT11|
          Length = 324

 Score =  151 bits (381), Expect = 1e-36
 Identities = 68/124 (54%), Positives = 86/124 (69%)
 Frame = +3

Query: 51  ERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICXTCC 230
           E  + PI+CESCLG NPY+RM +    K CK+C RPFTVFRW PG  +R+KKTEIC TC 
Sbjct: 6   EDLETPILCESCLGPNPYIRMTKDPRGKSCKVCTRPFTVFRWNPGAGSRFKKTEICATCA 65

Query: 231 KLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAEEHDRKAAAGIDYDS 410
           K+KNVCQ C+LDL+YGLPVQVRD AL I S+     SD  + YFA+  +++  A +   S
Sbjct: 66  KVKNVCQTCILDLQYGLPVQVRDAALGIKSDAGPTSSDKAKAYFADTMEKQLEATVGSSS 125

Query: 411 SYGK 422
             G+
Sbjct: 126 RAGQ 129

>SLT11_NEUCR (Q7RUX3) Pre-mRNA-splicing factor slt-11|
          Length = 392

 Score =  150 bits (380), Expect = 1e-36
 Identities = 71/160 (44%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
 Frame = +3

Query: 9   MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 188
           M  ++  D    GWE +DFP +CE+CL +NPYV+ML+ +Y  ECK+C RPFTVF W   R
Sbjct: 1   MPPQIKHDLNRSGWEATDFPSVCENCLPENPYVKMLKEDYGAECKLCTRPFTVFSWAADR 60

Query: 189 -DARYKKTEICXTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFA 365
             AR K+T IC TC +LKN CQ C+LDL++GLP+ +RD AL + +    P+S++NREYFA
Sbjct: 61  AHARKKRTNICLTCARLKNACQCCILDLQFGLPIIIRDKALELVAPG--PQSEINREYFA 118

Query: 366 EEHDRKAAAGIDYDSSYGKA--XXNDTILXLXXTXPYYXR 479
           + ++R    G      Y KA     + +  L  + PY+ +
Sbjct: 119 QNNERAIEEGRAGVEEYEKADEKARELLRRLAQSKPYFRK 158

>SLT11_SCHPO (O59800) Pre-mRNA-splicing factor slt11 (Complexed with cdc5|
           protein 5) (Cell cycle control protein cwf5)
          Length = 354

 Score =  132 bits (331), Expect = 7e-31
 Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
 Frame = +3

Query: 9   MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 188
           M+H    D     WE  +FP ICE CLGDN YVRM +    +ECKIC++P T+FRW   R
Sbjct: 1   MSHGPKGDINKQEWEDVEFPSICERCLGDNSYVRMTKEPLGQECKICSKPCTIFRWIKER 60

Query: 189 DARYKKTEICXTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAE 368
             +  KT+IC  C + KN CQ C+LDL++GLP+ +RD AL +  +   P +D+NRE+FA+
Sbjct: 61  GQKPGKTQICVGCARYKNCCQSCMLDLQFGLPIALRDAALKLVESG--PTNDINREFFAQ 118

Query: 369 EHDRKAAAG-IDYDSSYGKAXXNDTI 443
              R  + G   YDS    A   + +
Sbjct: 119 NQQRLLSNGETAYDSQEASAAARNLV 144

>SLT11_YARLI (Q6C3L4) Pre-mRNA-splicing factor SLT11|
          Length = 356

 Score =  112 bits (280), Expect = 5e-25
 Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 6/93 (6%)
 Frame = +3

Query: 48  WERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR----DARYK--KT 209
           WE ++ P +C  CLG NPY+RM + +Y  ECK+C RPFTVFRW+P R     +R K  KT
Sbjct: 13  WEDTEVPAVCTQCLGANPYIRMTKEKYGAECKMCTRPFTVFRWQPERAQKGSSRGKPLKT 72

Query: 210 EICXTCCKLKNVCQVCLLDLEYGLPVQVRDTAL 308
            +C TC + KN CQ C LDL YGLP+ +RD AL
Sbjct: 73  NVCLTCSRQKNCCQSCSLDLTYGLPLAIRDAAL 105

>SLT11_DEBHA (Q6BMD1) Pre-mRNA-splicing factor SLT11|
          Length = 359

 Score =  107 bits (268), Expect = 1e-23
 Identities = 51/128 (39%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
 Frame = +3

Query: 60  DFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDA-RYKKTEICXTCCKL 236
           +FP IC+SC G + +++M+R    +ECK+C RPFTVFRW P     + KKT IC TC + 
Sbjct: 4   EFPAICDSCCGPDKHIKMMRQANGEECKVCTRPFTVFRWNPNNGTNKSKKTIICMTCARA 63

Query: 237 KNVCQVCLLDLEYGLPVQVRDTALAINSND-----AIPRSDVNREYFAEEHDRKAAAGID 401
           +N CQ C+LD+ YG+P+++RDTAL +   +         +  NRE  A   D++ A   +
Sbjct: 64  RNCCQSCMLDITYGIPLEIRDTALKMAGLEHALQIKSSNTSQNREVKAIMADKQEAKYNN 123

Query: 402 YDSSYGKA 425
            D+   K+
Sbjct: 124 EDNDVNKS 131

>SLT11_CANAL (Q5A5N5) Pre-mRNA-splicing factor SLT11|
          Length = 303

 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
 Frame = +3

Query: 57  SDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICXTCCKL 236
           +D   IC  CLGD   ++M++     EC+ C RP+T++RW  G   +  KT IC TC + 
Sbjct: 3   TDIFSICAKCLGDESRIKMIKQVNGDECRQCTRPYTIYRW--GNRKQGNKTIICITCARA 60

Query: 237 KNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRS--DVNREYFAEEHDR 380
           ++ CQ CLLD+ YG+P  +RDTAL +   + + +S    NRE  A   D+
Sbjct: 61  RHCCQSCLLDITYGIPTDLRDTALEMAGLEPLTKSANPTNREVKAIMADK 110

>SLT11_ASHGO (Q750K9) Pre-mRNA-splicing factor SLT11|
          Length = 331

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
 Frame = +3

Query: 66  PIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICXTCCKLKNV 245
           P ICE CL D   +RM RA    ECKIC  PFT++ ++P    R  KT +C  C   +NV
Sbjct: 6   PSICEQCLTDAD-LRMTRAARGAECKICTLPFTLYHFKPPGAPRVTKTLVCRRCAAQRNV 64

Query: 246 CQVCLLDLEYGLPVQVRD--TALAINSNDAIPR--SDVNREYFAEEHDRKAAAGIDYDSS 413
           CQ C+LDL + LPV +RD   +L   S++  P   +++ R + A    +   A +  DS+
Sbjct: 65  CQCCMLDLAWKLPVALRDELVSLVQGSDERTPEASNEMVRRFLALRGGQLGGARLTADSA 124

>SLT11_YEAST (P38241) Pre-mRNA-splicing factor SLT11 (Synthetic lethality with|
           U2 protein 11) (Extracellular matrix protein 2)
          Length = 364

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
 Frame = +3

Query: 66  PIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPG-RDARYKKTEICXTCCKLKN 242
           P ICE CLGD   +RM +     ECKIC  PFT++ ++   R     KT IC  C   +N
Sbjct: 10  PNICEQCLGDEANIRMTKIPQGSECKICTLPFTLYHFKTSKRSNNIIKTLICVRCATQRN 69

Query: 243 VCQVCLLDLEYGLPVQVRDTALAINSNDAI----PRSDVNREYFAEEHDRKAAAGIDYDS 410
           +CQ C+LD  + +P+Q+RD  +++ + + +     ++D+ + + + ++ +   A I  D 
Sbjct: 70  ICQCCMLDSRWHIPIQLRDHLISLVNEENVMTEEAKNDMMKRFLSLKNVKLGGAQITSDP 129

Query: 411 S 413
           S
Sbjct: 130 S 130

>SLT11_CANGA (Q6FKZ2) Pre-mRNA-splicing factor SLT11|
          Length = 364

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
 Frame = +3

Query: 60  DFPIICESCLGD---NPYVRMLRAEYDKECKICARPFTVFRWRPG-RDARYKKTEICXTC 227
           + P ICE CLG    N  +RM        CKIC  P+T++ ++   R A   KT IC  C
Sbjct: 10  EVPQICEKCLGTSNTNENIRMNEVPNGAACKICTLPYTLYHFKKSHRSADIIKTLICKKC 69

Query: 228 CKLKNVCQVCLLDLEYGLPVQVRDTALAINS 320
              +NVCQ C+LD++  + +Q+RD  ++I S
Sbjct: 70  AIQRNVCQCCMLDMKLHISIQLRDKLMSIVS 100

>SLT11_KLULA (Q6CJI0) Pre-mRNA-splicing factor SLT11|
          Length = 302

 Score = 58.9 bits (141), Expect = 7e-09
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
 Frame = +3

Query: 72  ICESCL--GDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICXTCCKLKN- 242
           ICE CL  G+N    ++R    +ECK C  PF  + +       +    IC   C  KN 
Sbjct: 10  ICERCLPLGENTPT-LIRYPNGRECKFCTFPFDSYSYTINHTTFHT---ICCPKCATKNL 65

Query: 243 VCQVCLLDLEYGLPVQVRDT---ALAINSNDAIPRSDVNREYFAEEHDRKAAAGID 401
           +CQVCL D E+G+P+ +R++    L  N++  IP++D+ + +      + A   ID
Sbjct: 66  ICQVCLNDFEHGIPMHLRNSMKQLLNENADSVIPKNDMMKRFIGLSSKQVAPLNID 121

>DNAK_BDEBA (Q6MNF8) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 637

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 243 VCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAEEHDRKAAA 392
           +  V   D+  G   Q++ TA +  S D I R+  + E  AEE  RKA A
Sbjct: 475 ILHVSAKDMSSGKSQQIKITAQSGMSEDEIKRAVADAEGHAEEDKRKAEA 524


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,117,322
Number of Sequences: 219361
Number of extensions: 1232593
Number of successful extensions: 3297
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3282
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)