ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdd02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104700.1| Zea mays PCO101905 mRNA sequence 456 e-125
2dbj|AK120360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 444 e-121
3ref|XM_493940.1| Oryza sativa (japonica cultivar-group), Ozsa800... 428 e-117
4dbj|AK111689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 412 e-112
5ref|XM_477474.1| Oryza sativa (japonica cultivar-group), mRNA 406 e-110
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
7dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 254 2e-64
9dbj|AP005260.4| Oryza sativa (japonica cultivar-group) genomic D... 254 2e-64
10dbj|AK111997.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
11ref|NM_100610.2| Arabidopsis thaliana RNA binding / nucleic acid... 107 3e-20
12gb|AY114632.1| Arabidopsis thaliana unknown protein (At1g07360) ... 107 3e-20
13gb|AY054519.1| Arabidopsis thaliana Unknown protein (At1g07360; ... 107 3e-20
14emb|BX813529.1|CNS0ADSU Arabidopsis thaliana Full-length cDNA Co... 107 3e-20
15emb|BX817119.1|CNS0AD2R Arabidopsis thaliana Full-length cDNA Co... 107 3e-20
16gb|DQ294268.1| Solanum tuberosum clone 138G04 RRM-containing RNA... 100 8e-18
17gb|DQ268862.1| Solanum tuberosum clone 183E08 RRM-containing RNA... 92 2e-15
18gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana... 90 8e-15
19emb|BX814764.1|CNS0ADP0 Arabidopsis thaliana Full-length cDNA Co... 86 1e-13
20gb|BT014496.1| Lycopersicon esculentum clone 133866F, mRNA sequence 74 5e-10
21emb|CR761977.1| Xenopus tropicalis finished cDNA, clone TEgg040d02 68 3e-08
22gb|BC045067.1| Xenopus laevis hypothetical protein MGC53757, mRN... 64 5e-07
23gb|AC146743.11| Medicago truncatula clone mth2-12k22, complete s... 62 2e-06
24ref|NM_203777.1| Xenopus tropicalis RNA binding motif protein 22... 62 2e-06
25gb|BC062518.1| Xenopus tropicalis RNA binding motif protein 22, ... 62 2e-06
26emb|AL662949.4|OSJN00144 Oryza sativa genomic DNA, chromosome 4,... 60 7e-06
27emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4,... 60 7e-06
28dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
29ref|NM_128511.1| Arabidopsis thaliana RNA binding / nucleic acid... 58 3e-05
30gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map... 58 3e-05
31gb|AF428354.1|AF428354 Arabidopsis thaliana At2g29580/F16P2.4 mR... 58 3e-05
32gb|BT002621.1| Arabidopsis thaliana At2g29580/F16P2.4 gene, comp... 58 3e-05
33gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 44 0.43
34gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome... 42 1.7
35emb|CR733458.2|CNS0GSPT Tetraodon nigroviridis full-length cDNA 42 1.7
36gb|BC013764.1| Homo sapiens potassium channel tetramerisation do... 40 6.7
37gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.7
38gb|AF359381.1| Homo sapiens C13orf2 mRNA, complete cds 40 6.7
39emb|AL353741.16| Human DNA sequence from clone RP11-575C20 on ch... 40 6.7
40emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.7
41gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.7
42dbj|AK128363.1| Homo sapiens cDNA FLJ46506 fis, clone THYMU3030752 40 6.7
43gb|AF411576.1|AF411573S4 Actinomadura verrucosospora polyketide ... 40 6.7
44gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.7
45ref|NM_138444.2| Homo sapiens potassium channel tetramerisation ... 40 6.7
46gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.7
47gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.7
48gb|AC000403.1|AC000403 Genomic sequence from Human 13, complete ... 40 6.7
49dbj|AP006142.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 6.7
50gb|AC152000.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 6.7 
>gb|AY104700.1| Zea mays PCO101905 mRNA sequence
          Length = 1777

 Score =  456 bits (230), Expect = e-125
 Identities = 411/475 (86%)
 Strand = Plus / Plus

                                                                       
Query: 8   gatggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccgacttccc 67
           ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||
Sbjct: 126 gatggcgcaccggctgctgcgggacgcgcaggcggacgggtgggagcggtcggacttccc 185

                                                                       
Query: 68  catcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctgagagcagaata 127
           |||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |||||
Sbjct: 186 catcatctgcgagtcatgcctcggcgacaacccctacgtccggatgttaagagctgaata 245

                                                                       
Query: 128 tgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggagacctggtcg 187
           |||||| |||||||| || ||||| || ||||||||||| ||||| ||| | ||||| ||
Sbjct: 246 tgacaaagaatgcaaaatttgtgcacgtccttttactgtattccggtggcgtcctgggcg 305

                                                                       
Query: 188 ggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctg 247
            |||||||||||||||||||| ||||||||||| || || |||||| | || || |||||
Sbjct: 306 agatgcaaggtacaagaagactgagatctgccagacatgttgcaagctaaagaatgtctg 365

                                                                       
Query: 248 ccaggtctgccttctggaccttgaatatggtctgccagttcaggttcgcgatactgcgct 307
           |||||||||||| ||||| ||||||||||||||||| |||||||| || ||||| || ||
Sbjct: 366 ccaggtctgcctgctggatcttgaatatggtctgcctgttcaggtccgagatacagcact 425

                                                                       
Query: 308 cgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcgagtactttgcaga 367
           | | |||||||| || |||||||||||||||||||||||||| ||||| || ||||||||
Sbjct: 426 ctctatcaattccaatgatgcaattccaaggagtgatgtcaatcgcgaatattttgcaga 485

                                                                       
Query: 368 agagcatgatcgtaaggctgcagctggcatagactatgactcttcatatggaaaggcccn 427
           |||||||||| | | |||   |||||||||||||||||| || || ||||| ||||| | 
Sbjct: 486 agagcatgataggagggccagagctggcatagactatgattcatcctatgggaaggctcg 545

                                                                  
Query: 428 nncaaatgataccattctgaanctnnananaacttnaccatattacangaggaac 482
             ||||||||||||||||||| ||  | |  ||   ||||||||||| |||||||
Sbjct: 546 cccaaatgataccattctgaagcttcaaaggacagcaccatattacaagaggaac 600
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>dbj|AK120360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067M02, full
           insert sequence
          Length = 2047

 Score =  444 bits (224), Expect = e-121
 Identities = 414/481 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   cggcggcgatggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccg 60
           |||||| |||||| |||||||||||||| ||||||||||||||||| |||||| ||||||
Sbjct: 59  cggcggagatggctcaccggctgctgcgagacgcgcaggcggacgggtgggagcggtccg 118

                                                                       
Query: 61  acttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctgagag 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 119 acttccccatcatctgcgagtcctgcctcggcgacaacccctacgtccgcatgttgagag 178

                                                                       
Query: 121 cagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggagac 180
           |||||||||| || || ||||| || ||||| || || |||||||||||||||||| |||
Sbjct: 179 cagaatatgataaagagtgcaaaatatgtgcacgtccgtttactgtcttccgttggcgac 238

                                                                       
Query: 181 ctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaaaa 240
           |||| ||||||||||| ||||||||||||||||||||||| || || |||||  ||||||
Sbjct: 239 ctggccgggatgcaagatacaagaagacagagatctgccagacatgttgcaaactgaaaa 298

                                                                       
Query: 241 acgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttcgcgata 300
           | ||||||||||||||||| ||||| |||||||||||||| || || |||||| | ||||
Sbjct: 299 atgtctgccaggtctgcctgctggatcttgaatatggtctaccggtccaggttagggata 358

                                                                       
Query: 301 ctgcgctcgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcgagtact 360
           | || ||||| || ||||| || |||||||| |||||||||||||| ||||| |||||||
Sbjct: 359 cagcactcgctattaattcaaatgatgcaatcccaaggagtgatgtgaaccgtgagtact 418

                                                                       
Query: 361 ttgcagaagagcatgatcgtaaggctgcagctggcatagactatgactcttcatatggaa 420
           ||||||||||||||||||| |||||    ||||| ||||| ||||| |||||  |||| |
Sbjct: 419 ttgcagaagagcatgatcgcaaggccagggctggaatagattatgattcttcccatggga 478

                                                                       
Query: 421 aggcccnnncaaatgataccattctgaanctnnananaacttnaccatattacangagga 480
           |||| |   | ||||| ||||||||||| ||  | |  ||   ||||||||||| |||||
Sbjct: 479 aggcacgtcccaatgacaccattctgaagcttcagaggacggcaccatattacaagagga 538

            
Query: 481 a 481
           |
Sbjct: 539 a 539
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>ref|XM_493940.1| Oryza sativa (japonica cultivar-group), Ozsa8005 predicted mRNA
          Length = 1449

 Score =  428 bits (216), Expect = e-117
 Identities = 406/473 (85%)
 Strand = Plus / Plus

                                                                       
Query: 9   atggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccgacttcccc 68
           ||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||
Sbjct: 1   atggctcaccggctgctgcgagacgcgcaggcggacgggtgggagcggtccgacttcccc 60

                                                                       
Query: 69  atcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctgagagcagaatat 128
           |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61  atcatctgcgagtcctgcctcggcgacaacccctacgtccgcatgttgagagcagaatat 120

                                                                       
Query: 129 gacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggagacctggtcgg 188
           || || || ||||| || ||||| || || |||||||||||||||||| ||||||| |||
Sbjct: 121 gataaagagtgcaaaatatgtgcacgtccgtttactgtcttccgttggcgacctggccgg 180

                                                                       
Query: 189 gatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctgc 248
           |||||||| ||||||||||||||||||||||| || || |||||  ||||||| ||||||
Sbjct: 181 gatgcaagatacaagaagacagagatctgccagacatgttgcaaactgaaaaatgtctgc 240

                                                                       
Query: 249 caggtctgccttctggaccttgaatatggtctgccagttcaggttcgcgatactgcgctc 308
           ||||||||||| || || |||||||||||||| || || |||||| | ||||| || |||
Sbjct: 241 caggtctgcctgctagatcttgaatatggtctaccggtccaggttagggatacagcactc 300

                                                                       
Query: 309 gccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcgagtactttgcagaa 368
           || || ||||| || |||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 301 gctattaattcaaatgatgcaatcccaaggagtgatgtgaaccgtgagtactttgcagaa 360

                                                                       
Query: 369 gagcatgatcgtaaggctgcagctggcatagactatgactcttcatatggaaaggcccnn 428
           ||||||||||| |||||    ||||| ||||| ||||| |||||  |||| ||||| |  
Sbjct: 361 gagcatgatcgcaaggccagggctggaatagattatgattcttcccatgggaaggcacgt 420

                                                                
Query: 429 ncaaatgataccattctgaanctnnananaacttnaccatattacangaggaa 481
            | ||||| ||||||||||| ||  | |  ||   ||||||||||| ||||||
Sbjct: 421 cccaatgacaccattctgaagcttcagaggacggcaccatattacaagaggaa 473
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>dbj|AK111689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003O14, full
           insert sequence
          Length = 1661

 Score =  412 bits (208), Expect = e-112
 Identities = 360/411 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggcggcgatggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccga 61
           ||||| |||||| |||||||||||||||||||||||||||||||| |||||| | |||||
Sbjct: 67  ggcggagatggcccaccggctgctgcgggacgcgcaggcggacgggtgggagcgttccga 126

                                                                       
Query: 62  cttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctgagagc 121
           ||||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||
Sbjct: 127 cttccccatcatctgcgagtcctgcctcggcgacaacccctacgttcgcatgttaagagc 186

                                                                       
Query: 122 agaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggagacc 181
           |||||| || || || ||||| || ||||| || ||||||||||||||||||||| ||||
Sbjct: 187 agaatacgataaagagtgcaaaatatgtgcacgtccttttactgtcttccgttggcgacc 246

                                                                       
Query: 182 tggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaaaaa 241
           ||| ||||||||||||||||||||||||||||||||||| || || |||||  |||||||
Sbjct: 247 tggccgggatgcaaggtacaagaagacagagatctgccagacttgttgcaaactgaaaaa 306

                                                                       
Query: 242 cgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttcgcgatac 301
            |||||||||||||||||||| || ||||||||||||||||| || |||||  | |||||
Sbjct: 307 tgtctgccaggtctgccttctagatcttgaatatggtctgccggtccaggtcagggatac 366

                                                                       
Query: 302 tgcgctcgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcgagtactt 361
            || ||  | |  ||||| ||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 367 agcactttctactaattcaaacgatgcaatcccaaggagtgacgtgaaccgcgagtactt 426

                                                              
Query: 362 tgcagaagagcatgatcgtaaggctgcagctggcatagactatgactcttc 412
           |||||||||||||||||| | |||   |||||| || || |||||||||||
Sbjct: 427 tgcagaagagcatgatcgcagggccagagctggaattgattatgactcttc 477
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>ref|XM_477474.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1461

 Score =  406 bits (205), Expect = e-110
 Identities = 354/404 (87%)
 Strand = Plus / Plus

                                                                       
Query: 9   atggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccgacttcccc 68
           ||||| |||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 1   atggcccaccggctgctgcgggacgcgcaggcggacgggtgggagcgttccgacttcccc 60

                                                                       
Query: 69  atcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctgagagcagaatat 128
           |||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||||| 
Sbjct: 61  atcatctgcgagtcctgcctcggcgacaacccctacgttcgcatgttaagagcagaatac 120

                                                                       
Query: 129 gacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggagacctggtcgg 188
           || || || ||||| || ||||| || ||||||||||||||||||||| ||||||| |||
Sbjct: 121 gataaagagtgcaaaatatgtgcacgtccttttactgtcttccgttggcgacctggccgg 180

                                                                       
Query: 189 gatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctgc 248
           |||||||||||||||||||||||||||||||| || || |||||  ||||||| ||||||
Sbjct: 181 gatgcaaggtacaagaagacagagatctgccagacttgttgcaaactgaaaaatgtctgc 240

                                                                       
Query: 249 caggtctgccttctggaccttgaatatggtctgccagttcaggttcgcgatactgcgctc 308
           |||||||||||||| || ||||||||||||||||| || |||||  | ||||| || || 
Sbjct: 241 caggtctgccttctagatcttgaatatggtctgccggtccaggtcagggatacagcactt 300

                                                                       
Query: 309 gccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcgagtactttgcagaa 368
            | |  ||||| ||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 301 tctactaattcaaacgatgcaatcccaaggagtgacgtgaaccgcgagtactttgcagaa 360

                                                       
Query: 369 gagcatgatcgtaaggctgcagctggcatagactatgactcttc 412
           ||||||||||| | |||   |||||| || || |||||||||||
Sbjct: 361 gagcatgatcgcagggccagagctggaattgattatgactcttc 404
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  260 bits (131), Expect = 4e-66
 Identities = 235/270 (87%)
 Strand = Plus / Minus

                                                                           
Query: 115     tgagagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgtt 174
               |||||||||||||||| || || ||||| || ||||| || || ||||||||||||||||
Sbjct: 3538502 tgagagcagaatatgataaagagtgcaaaatatgtgcacgtccgtttactgtcttccgtt 3538443

                                                                           
Query: 175     ggagacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagt 234
               || ||||||| ||||||||||| ||||||||||||||||||||||| || || |||||  
Sbjct: 3538442 ggcgacctggccgggatgcaagatacaagaagacagagatctgccagacatgttgcaaac 3538383

                                                                           
Query: 235     tgaaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttc 294
               ||||||| ||||||||||||||||| || || |||||||||||||| || || |||||| 
Sbjct: 3538382 tgaaaaatgtctgccaggtctgcctgctagatcttgaatatggtctaccggtccaggtta 3538323

                                                                           
Query: 295     gcgatactgcgctcgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcg 354
               | ||||| || ||||| || ||||| || |||||||| |||||||||||||| ||||| |
Sbjct: 3538322 gggatacagcactcgctattaattcaaatgatgcaatcccaaggagtgatgtgaaccgtg 3538263

                                             
Query: 355     agtactttgcagaagagcatgatcgtaagg 384
               ||||||||||||||||||||||||| ||||
Sbjct: 3538262 agtactttgcagaagagcatgatcgcaagg 3538233



 Score =  176 bits (89), Expect = 4e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                           
Query: 1       cggcggcgatggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccg 60
               |||||| |||||| |||||||||||||| ||||||||||||||||| |||||| ||||||
Sbjct: 3539154 cggcggagatggctcaccggctgctgcgagacgcgcaggcggacgggtgggagcggtccg 3539095

                                                                    
Query: 61      acttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatg 113
               |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3539094 acttccccatcatctgcgagtcctgcctcggcgacaacccctacgtccgcatg 3539042
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>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0675A05
          Length = 131972

 Score =  260 bits (131), Expect = 4e-66
 Identities = 235/270 (87%)
 Strand = Plus / Minus

                                                                         
Query: 115   tgagagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgtt 174
             |||||||||||||||| || || ||||| || ||||| || || ||||||||||||||||
Sbjct: 30339 tgagagcagaatatgataaagagtgcaaaatatgtgcacgtccgtttactgtcttccgtt 30280

                                                                         
Query: 175   ggagacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagt 234
             || ||||||| ||||||||||| ||||||||||||||||||||||| || || |||||  
Sbjct: 30279 ggcgacctggccgggatgcaagatacaagaagacagagatctgccagacatgttgcaaac 30220

                                                                         
Query: 235   tgaaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttc 294
             ||||||| ||||||||||||||||| || || |||||||||||||| || || |||||| 
Sbjct: 30219 tgaaaaatgtctgccaggtctgcctgctagatcttgaatatggtctaccggtccaggtta 30160

                                                                         
Query: 295   gcgatactgcgctcgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcg 354
             | ||||| || ||||| || ||||| || |||||||| |||||||||||||| ||||| |
Sbjct: 30159 gggatacagcactcgctattaattcaaatgatgcaatcccaaggagtgatgtgaaccgtg 30100

                                           
Query: 355   agtactttgcagaagagcatgatcgtaagg 384
             ||||||||||||||||||||||||| ||||
Sbjct: 30099 agtactttgcagaagagcatgatcgcaagg 30070



 Score =  176 bits (89), Expect = 4e-41
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                         
Query: 1     cggcggcgatggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccg 60
             |||||| |||||| |||||||||||||| ||||||||||||||||| |||||| ||||||
Sbjct: 30991 cggcggagatggctcaccggctgctgcgagacgcgcaggcggacgggtgggagcggtccg 30932

                                                                  
Query: 61    acttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatg 113
             |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 30931 acttccccatcatctgcgagtcctgcctcggcgacaacccctacgtccgcatg 30879
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  254 bits (128), Expect = 2e-64
 Identities = 229/263 (87%)
 Strand = Plus / Minus

                                                                            
Query: 117      agagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttgg 176
                ||||||||||| || || || ||||| || ||||| || |||||||||||||||||||||
Sbjct: 10714519 agagcagaatacgataaagagtgcaaaatatgtgcacgtccttttactgtcttccgttgg 10714460

                                                                            
Query: 177      agacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttg 236
                 ||||||| ||||||||||||||||||||||||||||||||||| || || |||||  ||
Sbjct: 10714459 cgacctggccgggatgcaaggtacaagaagacagagatctgccagacttgttgcaaactg 10714400

                                                                            
Query: 237      aaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttcgc 296
                ||||| |||||||||||||||||||| || ||||||||||||||||| || |||||  | 
Sbjct: 10714399 aaaaatgtctgccaggtctgccttctagatcttgaatatggtctgccggtccaggtcagg 10714340

                                                                            
Query: 297      gatactgcgctcgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcgag 356
                ||||| || ||  | |  ||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 10714339 gatacagcactttctactaattcaaacgatgcaatcccaaggagtgacgtgaaccgcgag 10714280

                                       
Query: 357      tactttgcagaagagcatgatcg 379
                |||||||||||||||||||||||
Sbjct: 10714279 tactttgcagaagagcatgatcg 10714257



 Score =  167 bits (84), Expect = 4e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                            
Query: 2        ggcggcgatggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccga 61
                ||||| |||||| |||||||||||||||||||||||||||||||| |||||| | |||||
Sbjct: 10715182 ggcggagatggcccaccggctgctgcgggacgcgcaggcggacgggtgggagcgttccga 10715123

                                                                    
Query: 62       cttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatg 113
                ||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 10715122 cttccccatcatctgcgagtcctgcctcggcgacaacccctacgttcgcatg 10715071
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>dbj|AP005260.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0557D09
          Length = 135315

 Score =  254 bits (128), Expect = 2e-64
 Identities = 229/263 (87%)
 Strand = Plus / Minus

                                                                         
Query: 117   agagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttgg 176
             ||||||||||| || || || ||||| || ||||| || |||||||||||||||||||||
Sbjct: 43965 agagcagaatacgataaagagtgcaaaatatgtgcacgtccttttactgtcttccgttgg 43906

                                                                         
Query: 177   agacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttg 236
              ||||||| ||||||||||||||||||||||||||||||||||| || || |||||  ||
Sbjct: 43905 cgacctggccgggatgcaaggtacaagaagacagagatctgccagacttgttgcaaactg 43846

                                                                         
Query: 237   aaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttcgc 296
             ||||| |||||||||||||||||||| || ||||||||||||||||| || |||||  | 
Sbjct: 43845 aaaaatgtctgccaggtctgccttctagatcttgaatatggtctgccggtccaggtcagg 43786

                                                                         
Query: 297   gatactgcgctcgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcgag 356
             ||||| || ||  | |  ||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 43785 gatacagcactttctactaattcaaacgatgcaatcccaaggagtgacgtgaaccgcgag 43726

                                    
Query: 357   tactttgcagaagagcatgatcg 379
             |||||||||||||||||||||||
Sbjct: 43725 tactttgcagaagagcatgatcg 43703



 Score =  167 bits (84), Expect = 4e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                         
Query: 2     ggcggcgatggcgcaccggctgctgcgggacgcgcaggcggacggctgggagaggtccga 61
             ||||| |||||| |||||||||||||||||||||||||||||||| |||||| | |||||
Sbjct: 44628 ggcggagatggcccaccggctgctgcgggacgcgcaggcggacgggtgggagcgttccga 44569

                                                                 
Query: 62    cttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatg 113
             ||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 44568 cttccccatcatctgcgagtcctgcctcggcgacaacccctacgttcgcatg 44517
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>dbj|AK111997.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D10, full
           insert sequence
          Length = 1637

 Score =  153 bits (77), Expect = 6e-34
 Identities = 202/247 (81%)
 Strand = Plus / Plus

                                                                       
Query: 235 tgaaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttc 294
           ||||||| ||||||||||||||||| || || |||||||||||||| || || |||||| 
Sbjct: 1   tgaaaaatgtctgccaggtctgcctgctagatcttgaatatggtctaccggtccaggtta 60

                                                                       
Query: 295 gcgatactgcgctcgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcg 354
           | ||||| || ||||| || ||||| || |||||||| |||||||||||||| ||||| |
Sbjct: 61  gggatacagcactcgctattaattcaaatgatgcaatcccaaggagtgatgtgaaccgtg 120

                                                                       
Query: 355 agtactttgcagaagagcatgatcgtaaggctgcagctggcatagactatgactcttcat 414
           ||||||||||||||||||||||||| |||||    ||||| ||||| ||||| |||||  
Sbjct: 121 agtactttgcagaagagcatgatcgcaaggccagggctggaatagattatgattcttccc 180

                                                                       
Query: 415 atggaaaggcccnnncaaatgataccattctgaanctnnananaacttnaccatattaca 474
           |||| ||||| |   | ||||| ||||||||||| ||  | |  ||   |||||||||||
Sbjct: 181 atgggaaggcacgtcccaatgacaccattctgaagcttcagaggacggcaccatattaca 240

                  
Query: 475 ngaggaa 481
            ||||||
Sbjct: 241 agaggaa 247
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>ref|NM_100610.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G07360
           mRNA, complete cds
          Length = 1671

 Score =  107 bits (54), Expect = 3e-20
 Identities = 188/233 (80%)
 Strand = Plus / Plus

                                                                       
Query: 57  tccgacttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctg 116
           ||||| ||||| ||||||||||| || || ||||| |||||||||||||| || |||   
Sbjct: 101 tccgatttcccaatcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgacc 160

                                                                       
Query: 117 agagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttgg 176
           | |||  | ||||| |||||||||||||| ||| | || ||||| || || ||  | |||
Sbjct: 161 aaagcgaattatgataaggaatgcaagatatgtacacgacctttcacggtgtttaggtgg 220

                                                                       
Query: 177 agacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttg 236
            ||||||| |||||||| || |||||||| || || || || || || ||||||||||||
Sbjct: 221 cgacctggccgggatgctagatacaagaaaaccgaaatttgtcagacttgctgcaagttg 280

                                                                
Query: 237 aaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttca 289
           ||||| || || || ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 281 aaaaatgtttgtcaagtctgtcttctggatcttgagtatggtcttccagttca 333



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 339 agtgatgtcaaccgcgagtactttgcagaagagcatga 376
           |||||||||||| | ||||| ||||| |||||||||||
Sbjct: 383 agtgatgtcaacagagagtattttgctgaagagcatga 420
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>gb|AY114632.1| Arabidopsis thaliana unknown protein (At1g07360) mRNA, complete cds
          Length = 1489

 Score =  107 bits (54), Expect = 3e-20
 Identities = 188/233 (80%)
 Strand = Plus / Plus

                                                                       
Query: 57  tccgacttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctg 116
           ||||| ||||| ||||||||||| || || ||||| |||||||||||||| || |||   
Sbjct: 49  tccgatttcccaatcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgacc 108

                                                                       
Query: 117 agagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttgg 176
           | |||  | ||||| |||||||||||||| ||| | || ||||| || || ||  | |||
Sbjct: 109 aaagcgaattatgataaggaatgcaagatatgtacacgacctttcacggtgtttaggtgg 168

                                                                       
Query: 177 agacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttg 236
            ||||||| |||||||| || |||||||| || || || || || || ||||||||||||
Sbjct: 169 cgacctggccgggatgctagatacaagaaaaccgaaatttgtcagacttgctgcaagttg 228

                                                                
Query: 237 aaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttca 289
           ||||| || || || ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 229 aaaaatgtttgtcaagtctgtcttctggatcttgagtatggtcttccagttca 281



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 339 agtgatgtcaaccgcgagtactttgcagaagagcatga 376
           |||||||||||| | ||||| ||||| |||||||||||
Sbjct: 331 agtgatgtcaacagagagtattttgctgaagagcatga 368
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>gb|AY054519.1| Arabidopsis thaliana Unknown protein (At1g07360; F22G5.30) mRNA,
           complete cds
          Length = 1670

 Score =  107 bits (54), Expect = 3e-20
 Identities = 188/233 (80%)
 Strand = Plus / Plus

                                                                       
Query: 57  tccgacttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctg 116
           ||||| ||||| ||||||||||| || || ||||| |||||||||||||| || |||   
Sbjct: 101 tccgatttcccaatcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgacc 160

                                                                       
Query: 117 agagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttgg 176
           | |||  | ||||| |||||||||||||| ||| | || ||||| || || ||  | |||
Sbjct: 161 aaagcgaattatgataaggaatgcaagatatgtacacgacctttcacggtgtttaggtgg 220

                                                                       
Query: 177 agacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttg 236
            ||||||| |||||||| || |||||||| || || || || || || ||||||||||||
Sbjct: 221 cgacctggccgggatgctagatacaagaaaaccgaaatttgtcagacttgctgcaagttg 280

                                                                
Query: 237 aaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttca 289
           ||||| || || || ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 281 aaaaatgtttgtcaagtctgtcttctggatcttgagtatggtcttccagttca 333



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 339 agtgatgtcaaccgcgagtactttgcagaagagcatga 376
           |||||||||||| | ||||| ||||| |||||||||||
Sbjct: 383 agtgatgtcaacagagagtattttgctgaagagcatga 420
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>emb|BX813529.1|CNS0ADSU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB22ZD04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1616

 Score =  107 bits (54), Expect = 3e-20
 Identities = 188/233 (80%)
 Strand = Plus / Plus

                                                                       
Query: 57  tccgacttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctg 116
           ||||| ||||| ||||||||||| || || ||||| |||||||||||||| || |||   
Sbjct: 83  tccgatttcccaatcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgacc 142

                                                                       
Query: 117 agagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttgg 176
           | |||  | ||||| |||||||||||||| ||| | || ||||| || || ||  | |||
Sbjct: 143 aaagcgaattatgataaggaatgcaagatatgtacacgacctttcacggtgtttaggtgg 202

                                                                       
Query: 177 agacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttg 236
            ||||||| |||||||| || |||||||| || || || || || || ||||||||||||
Sbjct: 203 cgacctggccgggatgctagatacaagaaaaccgaaatttgtcagacttgctgcaagttg 262

                                                                
Query: 237 aaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttca 289
           ||||| || || || ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 263 aaaaatgtttgtcaagtctgtcttctggatcttgagtatggtcttccagttca 315



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 341 tgatgtcaaccgcgagtactttgcagaagagcatga 376
           |||||||||| | ||||| ||||| |||||||||||
Sbjct: 368 tgatgtcaacagagagtattttgctgaagagcatga 403
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>emb|BX817119.1|CNS0AD2R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH86ZC09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1581

 Score =  107 bits (54), Expect = 3e-20
 Identities = 188/233 (80%)
 Strand = Plus / Plus

                                                                       
Query: 57  tccgacttccccatcatctgcgagtcatgcctcggcgacaacccctacgtccgcatgctg 116
           ||||| ||||| ||||||||||| || || ||||| |||||||||||||| || |||   
Sbjct: 56  tccgatttcccaatcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgacc 115

                                                                       
Query: 117 agagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttgg 176
           | |||  | ||||| |||||||||||||| ||| | || ||||| || || ||  | |||
Sbjct: 116 aaagcgaattatgataaggaatgcaagatatgtacacgacctttcacggtgtttaggtgg 175

                                                                       
Query: 177 agacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttg 236
            ||||||| |||||||| || |||||||| || || || || || || ||||||||||||
Sbjct: 176 cgacctggccgggatgctagatacaagaaaaccgaaatttgtcagacttgctgcaagttg 235

                                                                
Query: 237 aaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttca 289
           ||||| || || || ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 236 aaaaatgtttgtcaagtctgtcttctggatcttgagtatggtcttccagttca 288



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 339 agtgatgtcaaccgcgagtactttgcagaagagcatga 376
           |||||||||||| | ||||| ||||| |||||||||||
Sbjct: 338 agtgatgtcaacagagagtattttgctgaagagcatga 375
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>gb|DQ294268.1| Solanum tuberosum clone 138G04 RRM-containing RNA-binding
           protein-like protein mRNA, complete cds
          Length = 1747

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 181/225 (80%)
 Strand = Plus / Plus

                                                                       
Query: 119 agcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggag 178
           |||||| ||||||||||| |||||||| ||  | || || || || || ||| | |||||
Sbjct: 215 agcagattatgacaaggagtgcaagatatgcacacgacccttcacagtgttcagatggag 274

                                                                       
Query: 179 acctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaa 238
           |||||||||||||||||| ||||| ||  | |||||||| || || ||| ||||||||||
Sbjct: 275 acctggtcgggatgcaagatacaaaaaatctgagatctgtcagacctgcagcaagttgaa 334

                                                                       
Query: 239 aaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttcgcga 298
            || || || || || || ||| |||| ||||| |||||| ||||||||||||| || ||
Sbjct: 335 gaatgtttgtcaagtttgtcttttggatcttgagtatggtttgccagttcaggtccgaga 394

                                                        
Query: 299 tactgcgctcgccatcaattcgaacgatgcaattccaaggagtga 343
            ||||| |||   |||||||| || ||||||||||| | ||||||
Sbjct: 395 cactgctctcagtatcaattctaatgatgcaattcccaagagtga 439
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>gb|DQ268862.1| Solanum tuberosum clone 183E08 RRM-containing RNA-binding
           protein-like protein mRNA, complete cds
          Length = 1679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 180/225 (80%)
 Strand = Plus / Plus

                                                                       
Query: 119 agcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggag 178
           |||||| ||||||||||| |||||||| ||  | || || || || || ||| | |||||
Sbjct: 194 agcagattatgacaaggagtgcaagatatgcacacgacccttcacagtgttcagatggag 253

                                                                       
Query: 179 acctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaa 238
           |||||||||||||||||| ||||| ||  | |||||||| || || ||| ||||||||||
Sbjct: 254 acctggtcgggatgcaagatacaaaaaatctgagatctgtcagacctgcagcaagttgaa 313

                                                                       
Query: 239 aaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttcgcga 298
            || || || || || || ||| |||| ||||| |||||| ||||||||||| | || ||
Sbjct: 314 gaatgtttgtcaagtttgtcttttggatcttgagtatggtttgccagttcagttccgaga 373

                                                        
Query: 299 tactgcgctcgccatcaattcgaacgatgcaattccaaggagtga 343
            ||||| |||   |||||||| || ||||||||||| | ||||||
Sbjct: 374 cactgctctcagtatcaattctaatgatgcaattcccaagagtga 418
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>gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana BAC F22G5 from chromosome I,
             complete sequence
          Length = 104830

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 134/164 (81%)
 Strand = Plus / Plus

                                                                         
Query: 126   tatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggagacctggt 185
             ||||| |||||||||||||| ||| | || ||||| || || ||  | ||| ||||||| 
Sbjct: 81718 tatgataaggaatgcaagatatgtacacgacctttcacggtgtttaggtggcgacctggc 81777

                                                                         
Query: 186   cgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaaaaacgtc 245
             |||||||| || |||||||| || || || || || || ||||||||||||||||| || 
Sbjct: 81778 cgggatgctagatacaagaaaaccgaaatttgtcagacttgctgcaagttgaaaaatgtt 81837

                                                         
Query: 246   tgccaggtctgccttctggaccttgaatatggtctgccagttca 289
             || || ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 81838 tgtcaagtctgtcttctggatcttgagtatggtcttccagttca 81881



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 57    tccgacttccccatcatctgcgagtcatgcctcggcgacaacccctacgt 106
             ||||| ||||| ||||||||||| || || ||||| ||||||||||||||
Sbjct: 81313 tccgatttcccaatcatctgcgaatcttgtctcggtgacaacccctacgt 81362



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 339   agtgatgtcaaccgcgagtactttgcagaagagcatga 376
             |||||||||||| | ||||| ||||| |||||||||||
Sbjct: 81931 agtgatgtcaacagagagtattttgctgaagagcatga 81968
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>emb|BX814764.1|CNS0ADP0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB93ZC03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1616

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 187/234 (79%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  tccgacttccccatcatctgcg-agtcatgcctcggcgacaacccctacgtccgcatgct 115
           ||||| ||||| |||||||||| | || || ||||| |||||||||||||| || |||  
Sbjct: 91  tccgatttcccaatcatctgcgcaatcttgtctcggtgacaacccctacgtgcgaatgac 150

                                                                       
Query: 116 gagagcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttg 175
            | |||  | ||||| |||||||||||||| ||| | || ||||| || || ||  | ||
Sbjct: 151 caaagcgaattatgataaggaatgcaagatatgtacacgacctttcacggtgtttaggtg 210

                                                                       
Query: 176 gagacctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagtt 235
           | ||||||| |||||||| || |||||||| || || || || || || |||||||||||
Sbjct: 211 gcgacctggccgggatgctagatacaagaaaaccgaaatttgtcagacttgctgcaagtt 270

                                                                 
Query: 236 gaaaaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttca 289
           |||||| || ||  | ||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 271 gaaaaatgtttgtgaagtctgtcttctggatcttgagtatggtcttccagttca 324



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 339 agtgatgtcaaccgcgagtactttgcagaagagcatga 376
           |||||||||||| | ||||| ||||| |||||||||||
Sbjct: 374 agtgatgtcaacagagagtattttgctgaagagcatga 411
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>gb|BT014496.1| Lycopersicon esculentum clone 133866F, mRNA sequence
          Length = 1903

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 249/321 (77%)
 Strand = Plus / Plus

                                                                       
Query: 119 agcagaatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccgttggag 178
           |||||| ||||||||||| |||||||||||  | || || || || || ||| | |||||
Sbjct: 302 agcagattatgacaaggagtgcaagatctgcacgcgacccttcacagtgttcaggtggag 361

                                                                       
Query: 179 acctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaa 238
            |||||||||||||| || ||||| ||| | |||||||| || || ||| |||| |||||
Sbjct: 362 gcctggtcgggatgcgagatacaaaaagtctgagatctgtcagacctgcagcaaattgaa 421

                                                                       
Query: 239 aaacgtctgccaggtctgccttctggaccttgaatatggtctgccagttcaggttcgcga 298
            || || || || || |||||  | || |||||||||||| |||| |||||||| || ||
Sbjct: 422 gaatgtttgtcaagtttgcctgttagatcttgaatatggtttgcctgttcaggtccgaga 481

                                                                       
Query: 299 tactgcgctcgccatcaattcgaacgatgcaattccaaggagtgatgtcaaccgcgagta 358
            ||||| |||   ||||| || || ||||| || |||| |||||| || ||  | || ||
Sbjct: 482 cactgctctcagtatcaactcaaatgatgccatcccaaagagtgacgtaaatagagaata 541

                                                                       
Query: 359 ctttgcagaagagcatgatcgtaaggctgcagctggcatagactatgactcttcatatgg 418
            |||||||| |||||||| || | |||    ||||| || || ||||| |||||||||||
Sbjct: 542 ttttgcagaggagcatgaccgaagggcaagggctggtattgattatgaatcttcatatgg 601

                                
Query: 419 aaaggcccnnncaaatgatac 439
           ||| | ||   ||||||||||
Sbjct: 602 aaaagtccgtgcaaatgatac 622
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>emb|CR761977.1| Xenopus tropicalis finished cDNA, clone TEgg040d02
          Length = 1531

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 201 aagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctgccaggtctgcctt 260
           |||||||||||  | ||||| |||||| ||||||||||||| ||||| |||  ||| || 
Sbjct: 207 aagaagacagaagtgtgccaaacgtgcagcaagttgaaaaatgtctgtcagacctgtctg 266

                                        
Query: 261 ctggaccttgaatatggtctgccagttca 289
           || |||||||||||||| |||||| ||||
Sbjct: 267 cttgaccttgaatatggactgccaattca 295
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>gb|BC045067.1| Xenopus laevis hypothetical protein MGC53757, mRNA (cDNA clone
           MGC:53757 IMAGE:5536969), complete cds
          Length = 1502

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                       
Query: 201 aagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctgccaggtctgcctt 260
           |||||||||||  | ||||| || ||| ||||||||||||| ||||| |||  |||| | 
Sbjct: 206 aagaagacagaagtgtgccaaacatgcagcaagttgaaaaatgtctgtcagacctgcttg 265

                                                      
Query: 261 ctggaccttgaatatggtctgccagttcaggttcgcgatactg 303
           || |||||||||||||| |||||| |||| || || |||||||
Sbjct: 266 cttgaccttgaatatggactgccaattcaagtacgagatactg 308
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>gb|AC146743.11| Medicago truncatula clone mth2-12k22, complete sequence
          Length = 116419

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 174   tggagacctggtcgggatgcaaggtacaagaagacagagatctgcca 220
             ||||||||||||||||||||||| || |||||  |||||||||||||
Sbjct: 99135 tggagacctggtcgggatgcaagatataagaaatcagagatctgcca 99181



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 57    tccgacttccccatcatctgcgagtcatg 85
             |||||||| |||||||||||||| |||||
Sbjct: 98402 tccgactttcccatcatctgcgaatcatg 98430
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>ref|NM_203777.1| Xenopus tropicalis RNA binding motif protein 22 (rbm22), mRNA
          Length = 1550

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgccanacgtgctgcaagttgaaaaacgtctgccaggtctgccttctggaccttgaatat 275
           ||||| |||||| ||||||||||||| ||||| |||  ||| || || ||||||||||||
Sbjct: 228 tgccaaacgtgcagcaagttgaaaaatgtctgtcagacctgtctgcttgaccttgaatat 287

                         
Query: 276 ggtctgccagttca 289
           || |||||| ||||
Sbjct: 288 ggactgccaattca 301
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>gb|BC062518.1| Xenopus tropicalis RNA binding motif protein 22, mRNA (cDNA clone
           MGC:76229 IMAGE:5336540), complete cds
          Length = 1550

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 216 tgccanacgtgctgcaagttgaaaaacgtctgccaggtctgccttctggaccttgaatat 275
           ||||| |||||| ||||||||||||| ||||| |||  ||| || || ||||||||||||
Sbjct: 228 tgccaaacgtgcagcaagttgaaaaatgtctgtcagacctgtctgcttgaccttgaatat 287

                         
Query: 276 ggtctgccagttca 289
           || |||||| ||||
Sbjct: 288 ggactgccaattca 301
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>emb|AL662949.4|OSJN00144 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I21,
              complete sequence
          Length = 127162

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 29     ggacgcgcaggcggacggctgggagaggtccgacttccccatcatctgcgagtc 82
              ||||| |||||||||||| |||||| |||| || ||||||||||||| ||||||
Sbjct: 104011 ggacgtgcaggcggacgggtgggagcggtcggatttccccatcatctacgagtc 104064



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 78/94 (82%), Gaps = 3/94 (3%)
 Strand = Plus / Plus

                                                                          
Query: 179    acctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaa 238
              |||||||||||||||   ||||||||||||||| || ||||| || || ||| |  ||||
Sbjct: 118082 acctggtcgggatgc---gtacaagaagacagaaatatgccagacatgttgccaactgaa 118138

                                                
Query: 239    aaacgtctgccaggtctgccttctggaccttgaa 272
              ||| ||||||| ||||||||| || || ||||||
Sbjct: 118139 aaaagtctgcctggtctgcctgctagatcttgaa 118172
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>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23,
              complete sequence
          Length = 150305

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 29     ggacgcgcaggcggacggctgggagaggtccgacttccccatcatctgcgagtc 82
              ||||| |||||||||||| |||||| |||| || ||||||||||||| ||||||
Sbjct: 141199 ggacgtgcaggcggacgggtgggagcggtcggatttccccatcatctacgagtc 141146



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 78/94 (82%), Gaps = 3/94 (3%)
 Strand = Plus / Minus

                                                                          
Query: 179    acctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaa 238
              |||||||||||||||   ||||||||||||||| || ||||| || || ||| |  ||||
Sbjct: 127128 acctggtcgggatgc---gtacaagaagacagaaatatgccagacatgttgccaactgaa 127072

                                                
Query: 239    aaacgtctgccaggtctgccttctggaccttgaa 272
              ||| ||||||| ||||||||| || || ||||||
Sbjct: 127071 aaaagtctgcctggtctgcctgctagatcttgaa 127038
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 29      ggacgcgcaggcggacggctgggagaggtccgacttccccatcatctgcgagtc 82
               ||||| |||||||||||| |||||| |||| || ||||||||||||| ||||||
Sbjct: 4513467 ggacgtgcaggcggacgggtgggagcggtcggatttccccatcatctacgagtc 4513414



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 78/94 (82%), Gaps = 3/94 (3%)
 Strand = Plus / Minus

                                                                           
Query: 179     acctggtcgggatgcaaggtacaagaagacagagatctgccanacgtgctgcaagttgaa 238
               |||||||||||||||   ||||||||||||||| || ||||| || || ||| |  ||||
Sbjct: 4499396 acctggtcgggatgc---gtacaagaagacagaaatatgccagacatgttgccaactgaa 4499340

                                                 
Query: 239     aaacgtctgccaggtctgccttctggaccttgaa 272
               ||| ||||||| ||||||||| || || ||||||
Sbjct: 4499339 aaaagtctgcctggtctgcctgctagatcttgaa 4499306
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>ref|NM_128511.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT2G29580
           mRNA, complete cds
          Length = 1718

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                       
Query: 141 aagatctgtgctcgcccttttactgtcttccgttggagacctggtcgggatgcaaggtac 200
           ||||||||| | || ||||| || || ||| | ||| |||||||| ||||||| || |||
Sbjct: 221 aagatctgtacccggcctttcacggttttcagatggcgacctggtagggatgcgagatac 280

                                                                       
Query: 201 aagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctgccaggtctgcctt 260
           |||||||| ||  | || || || || ||||||||||| || || ||||| || || || 
Sbjct: 281 aagaagactgaagtttgtcagacatgttgcaagttgaagaatgtgtgccaagtttgtctc 340

                                           
Query: 261 ctggaccttgaatatggtctgccagttcaggt 292
            |||| ||||| |||||||| |||||||||||
Sbjct: 341 ttggatcttgagtatggtcttccagttcaggt 372
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>gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map ve014, complete
            sequence
          Length = 131743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 121/152 (79%)
 Strand = Plus / Minus

                                                                        
Query: 141  aagatctgtgctcgcccttttactgtcttccgttggagacctggtcgggatgcaaggtac 200
            ||||||||| | || ||||| || || ||| | ||| |||||||| ||||||| || |||
Sbjct: 7200 aagatctgtacccggcctttcacggttttcagatggcgacctggtagggatgcgagatac 7141

                                                                        
Query: 201  aagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctgccaggtctgcctt 260
            |||||||| ||  | || || || || ||||||||||| || || ||||| || || || 
Sbjct: 7140 aagaagactgaagtttgtcagacatgttgcaagttgaagaatgtgtgccaagtttgtctc 7081

                                            
Query: 261  ctggaccttgaatatggtctgccagttcaggt 292
             |||| ||||| |||||||| |||||||||||
Sbjct: 7080 ttggatcttgagtatggtcttccagttcaggt 7049
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>gb|AF428354.1|AF428354 Arabidopsis thaliana At2g29580/F16P2.4 mRNA, complete cds
          Length = 1718

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                       
Query: 141 aagatctgtgctcgcccttttactgtcttccgttggagacctggtcgggatgcaaggtac 200
           ||||||||| | || ||||| || || ||| | ||| |||||||| ||||||| || |||
Sbjct: 221 aagatctgtacccggcctttcacggttttcagatggcgacctggtagggatgcgagatac 280

                                                                       
Query: 201 aagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctgccaggtctgcctt 260
           |||||||| ||  | || || || || ||||||||||| || || ||||| || || || 
Sbjct: 281 aagaagactgaagtttgtcagacatgttgcaagttgaagaatgtgtgccaagtttgtctc 340

                                           
Query: 261 ctggaccttgaatatggtctgccagttcaggt 292
            |||| ||||| |||||||| |||||||||||
Sbjct: 341 ttggatcttgagtatggtcttccagttcaggt 372
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>gb|BT002621.1| Arabidopsis thaliana At2g29580/F16P2.4 gene, complete cds
          Length = 1452

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                       
Query: 141 aagatctgtgctcgcccttttactgtcttccgttggagacctggtcgggatgcaaggtac 200
           ||||||||| | || ||||| || || ||| | ||| |||||||| ||||||| || |||
Sbjct: 133 aagatctgtacccggcctttcacggttttcagatggcgacctggtagggatgcgagatac 192

                                                                       
Query: 201 aagaagacagagatctgccanacgtgctgcaagttgaaaaacgtctgccaggtctgcctt 260
           |||||||| ||  | || || || || ||||||||||| || || ||||| || || || 
Sbjct: 193 aagaagactgaagtttgtcagacatgttgcaagttgaagaatgtgtgccaagtttgtctc 252

                                           
Query: 261 ctggaccttgaatatggtctgccagttcaggt 292
            |||| ||||| |||||||| |||||||||||
Sbjct: 253 ttggatcttgagtatggtcttccagttcaggt 284
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 281     gccagttcaggttcgcgatactgcgc 306
               ||||||||||||| ||||||||||||
Sbjct: 3042776 gccagttcaggttggcgatactgcgc 3042801
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>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence
          Length = 219597

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   gcaaggtacaagaagacagag 212
             |||||||||||||||||||||
Sbjct: 27795 gcaaggtacaagaagacagag 27775
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>emb|CR733458.2|CNS0GSPT Tetraodon nigroviridis full-length cDNA
          Length = 1754

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 124 aatatgacaaggaatgcaagatctgtgctcgcccttttactgtcttccg 172
           |||||| ||| || ||||||||||||||||| || ||||| || |||||
Sbjct: 66  aatatggcaaagagtgcaagatctgtgctcggccatttacggttttccg 114
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>gb|BC013764.1| Homo sapiens potassium channel tetramerisation domain containing
           12, mRNA (cDNA clone MGC:21736 IMAGE:4521096), complete
           cds
          Length = 3086

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gcgggacgcgcaggcggacg 45
           ||||||||||||||||||||
Sbjct: 750 gcgggacgcgcaggcggacg 769
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 25      tgcgggacgcgcaggcggacggct 48
               ||||| ||||||||||||||||||
Sbjct: 1095576 tgcggcacgcgcaggcggacggct 1095553
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>gb|AF359381.1| Homo sapiens C13orf2 mRNA, complete cds
          Length = 6216

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gcgggacgcgcaggcggacg 45
           ||||||||||||||||||||
Sbjct: 905 gcgggacgcgcaggcggacg 924
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>emb|AL353741.16| Human DNA sequence from clone RP11-575C20 on chromosome 9 Contains a
              general transcription factor IIIA (GTF3A) pseudogene, a
              novel gene (DVS27) and a CpG island, complete sequence
          Length = 199517

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    tatgactcttcatatggaaa 421
              ||||||||||||||||||||
Sbjct: 101816 tatgactcttcatatggaaa 101835
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 25      tgcgggacgcgcaggcggacggct 48
               ||||| ||||||||||||||||||
Sbjct: 2413066 tgcggcacgcgcaggcggacggct 2413043
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 88      tcggcgacaacccctacgtccgca 111
               |||||||||||||| |||||||||
Sbjct: 1794038 tcggcgacaaccccgacgtccgca 1794015
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>dbj|AK128363.1| Homo sapiens cDNA FLJ46506 fis, clone THYMU3030752
          Length = 3842

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gcgggacgcgcaggcggacg 45
           ||||||||||||||||||||
Sbjct: 923 gcgggacgcgcaggcggacg 942
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>gb|AF411576.1|AF411573S4 Actinomadura verrucosospora polyketide synthase 2 gene, complete cds
          Length = 3185

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   cgggacgcgcaggcggacgg 46
            ||||||||||||||||||||
Sbjct: 2700 cgggacgcgcaggcggacgg 2719
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     tgcgggacgcgcaggcggacggct 48
              ||||| ||||||||||||||||||
Sbjct: 322984 tgcggcacgcgcaggcggacggct 323007
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>ref|NM_138444.2| Homo sapiens potassium channel tetramerisation domain containing 12
           (KCTD12), mRNA
          Length = 6216

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gcgggacgcgcaggcggacg 45
           ||||||||||||||||||||
Sbjct: 905 gcgggacgcgcaggcggacg 924
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     tgcgggacgcgcaggcggacggct 48
              ||||| ||||||||||||||||||
Sbjct: 722058 tgcggcacgcgcaggcggacggct 722081
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 11      ggcgcaccggctgctgcgggacgcgcag 38
               |||||||||| || ||||||||||||||
Sbjct: 1220796 ggcgcaccggatggtgcgggacgcgcag 1220769
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>gb|AC000403.1|AC000403 Genomic sequence from Human 13, complete sequence
          Length = 109201

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 26   gcgggacgcgcaggcggacg 45
            ||||||||||||||||||||
Sbjct: 9213 gcgggacgcgcaggcggacg 9194
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>dbj|AP006142.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08A24, TM0250,
             complete sequence
          Length = 104321

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    tccgacttccccatcatctg 76
             ||||||||||||||||||||
Sbjct: 92194 tccgacttccccatcatctg 92175
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>gb|AC152000.3| Ornithorhynchus anatinus chromosome UNK clone OABb-501A1, complete
             sequence
          Length = 149165

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    gacttccccatcatctgcgagtca 83
             ||||||||||||||| ||||||||
Sbjct: 29074 gacttccccatcatcggcgagtca 29097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,934,159
Number of Sequences: 3902068
Number of extensions: 2934159
Number of successful extensions: 54908
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54445
Number of HSP's gapped (non-prelim): 441
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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