ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdc23 |
|---|---|
| Clone Library Name | barley_pub |
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 81.3 bits (199), Expect = 1e-15 Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 1/121 (0%) Frame = +3 Query: 111 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVN 290 A EH+ C++ EG LCVNNCGFFGS+ATMN+CS C+ ++ +KQ+Q S+ +S ++ Sbjct: 2 AEEHR---CETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLS 58 Query: 291 GGDA-VKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAMESPKGPSRCSTCRKRVG 467 A V E+ AA + K +P I P+E P+ P+RC+ CRKRVG Sbjct: 59 PVIAPVLENYAAELEIPTTKKTEEK-----KPIQI--PTEQP-SPPQRPNRCTVCRKRVG 110 Query: 468 L 470 L Sbjct: 111 L 111
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 63.2 bits (152), Expect = 3e-10 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 15/121 (12%) Frame = +3 Query: 153 PILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGST 332 P LC N CGFFGS + MN+CSKC++ + +++Q +A + AVK L S Sbjct: 16 PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKA----------AVKNSLKLPSC 65 Query: 333 AVAV-----------AHVQAKALITAQPADIAGPSEAAMESPKGP----SRCSTCRKRVG 467 ++ AH++ ++TA+P+ + +E P P +RC +C K+VG Sbjct: 66 SIIAPGQKHPLEIKPAHLET-VVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVG 124 Query: 468 L 470 + Sbjct: 125 V 125
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 58.9 bits (141), Expect = 6e-09 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 1/119 (0%) Frame = +3 Query: 117 EHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGG 296 E ++ S P LCV CGFFGS + MN+CSKC++++ +EQ A ++ + +N Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPN 63 Query: 297 DAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAMESPKG-PSRCSTCRKRVGL 470 + + V + + T A P ++ PK +RC +C K+VG+ Sbjct: 64 KPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAP----LDPPKSTATRCLSCNKKVGV 118
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 49.3 bits (116), Expect = 5e-06 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 47/154 (30%) Frame = +3 Query: 150 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQA-----------KLAASSFDSIVNGG 296 GP+LC CGF+G+ T MCS C+KE +Q+ + + +S + V Sbjct: 10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRA 69 Query: 297 DAVKEHL--AAGSTAVAVAHVQAKAL---------------------------ITAQPA- 386 DA + AAGST+ +V AL + QP+ Sbjct: 70 DAGLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSP 129 Query: 387 DIAGPS-----EAAMESPKGP-SRCSTCRKRVGL 470 ++ PS E A E PK +RC CRK+VGL Sbjct: 130 SVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGL 163
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 48.9 bits (115), Expect = 6e-06 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 47/154 (30%) Frame = +3 Query: 150 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL-----AASSFDSIVNGGDAVKE- 311 GP+LC CGF+G+ T MCS C+KE +Q+ + AS +S + +V+ Sbjct: 10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRA 69 Query: 312 -------HLAAGSTAVAVAHVQAKAL---------------------------ITAQPA- 386 AAGST+ +V AL + QP+ Sbjct: 70 DTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSP 129 Query: 387 DIAGPS-----EAAMESPKGP-SRCSTCRKRVGL 470 ++ PS E A E PK +RC CRK+VGL Sbjct: 130 SVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGL 163
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 43.9 bits (102), Expect = 2e-04 Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 7/111 (6%) Frame = +3 Query: 159 LCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAV 338 LC N+CGF G+ AT N+C C A A++S S ++ K+ + V Sbjct: 21 LCANSCGFPGNPATQNLCQNCF--------LAATASTSSPSSLSSPVLDKQPPRPAAPLV 72 Query: 339 -------AVAHVQAKALITAQPADIAGPSEAAMESPKGPSRCSTCRKRVGL 470 A AL TA PA +A S +RCS CRKRVGL Sbjct: 73 EPQAPLPPPVEEMASALATA-PAPVAKTSAV--------NRCSRCRKRVGL 114
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 126 ETGCQSREGPILCVN-NCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDS 281 +TG + P L CGF+GS+ TMN+CSKC + KQ A S+ S Sbjct: 3 DTGSERSNAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSS 55
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 40.4 bits (93), Expect = 0.002 Identities = 27/93 (29%), Positives = 40/93 (43%) Frame = +3 Query: 174 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHV 353 CGF+GS+ TMN+CSKC + KQ A S+ +S D E + + ++ Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNS---QSDLFSEETTSDNNNTSI--- 73 Query: 354 QAKALITAQPADIAGPSEAAMESPKGPSRCSTC 452 T P+ P+E + SP C C Sbjct: 74 ---TTPTLSPSQQPLPTELNVTSP-SKEECGPC 102
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 40.0 bits (92), Expect = 0.003 Identities = 27/93 (29%), Positives = 40/93 (43%) Frame = +3 Query: 174 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHV 353 CGF+GS+ TMN+CSKC + KQ S+ +S D E + + +V Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS---QSDLFSEETTSDNNNTSV--- 73 Query: 354 QAKALITAQPADIAGPSEAAMESPKGPSRCSTC 452 T P+ + P+E + SP C C Sbjct: 74 ---TTPTLSPSQQSLPTELNVTSP-SEEECGPC 102
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 40.0 bits (92), Expect = 0.003 Identities = 27/93 (29%), Positives = 40/93 (43%) Frame = +3 Query: 174 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHV 353 CGF+GS+ TMN+CSKC + KQ S+ +S D E + + +V Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS---QSDLFSEETTSDNNNTSV--- 73 Query: 354 QAKALITAQPADIAGPSEAAMESPKGPSRCSTC 452 T P+ + P+E + SP C C Sbjct: 74 ---TTPTLSPSQQSLPTELNVTSP-STEECGPC 102
>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 492 Score = 37.0 bits (84), Expect = 0.025 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +3 Query: 111 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 260 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 2 SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 51
>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated| exchange factor for Rab5) (Rabex-5) Length = 708 Score = 37.0 bits (84), Expect = 0.025 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +3 Query: 111 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 260 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 140 SLKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 189
>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 491 Score = 37.0 bits (84), Expect = 0.025 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +3 Query: 111 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 260 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 2 SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQI 51
>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 33.5 bits (75), Expect = 0.28 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 Query: 171 NCGFFGSAATMNMCSKCHKEMAMKQEQAKLA 263 NC F+G A T + CS C++E ++ +A+ A Sbjct: 894 NCAFYGRAETEHFCSYCYREELRRRREARAA 924
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 32.0 bits (71), Expect = 0.82 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +3 Query: 171 NCGFFGSAATMNMCSKCHKEMAMKQEQAK 257 NC F+G A T + CS C++E ++ +A+ Sbjct: 894 NCAFYGRAETEHYCSYCYREELRRRREAR 922
>SNX18_MOUSE (Q91ZR2) Sorting nexin-18 (Sorting nexin-associated Golgi protein| 1) Length = 614 Score = 31.6 bits (70), Expect = 1.1 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +2 Query: 395 WSQRGGHGEPQRPKPVQHLQKEGR 466 WSQ GHGEPQ P+ + HL++ GR Sbjct: 208 WSQELGHGEPQ-PQSLLHLRQVGR 230
>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)| (Cellular zinc finger anti-NF-kappa B protein) (Zinc finger protein Cezanne) Length = 843 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 171 NCGFFGSAATMNMCSKCHKEMAMKQEQ 251 NC F+G T N CS C++E ++E+ Sbjct: 806 NCSFYGHPETNNFCSCCYREELRRRER 832
>FA43B_HUMAN (Q6ZT52) Protein FAM43B| Length = 329 Score = 30.8 bits (68), Expect = 1.8 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = +3 Query: 207 MCSKCHKEMAMKQ--EQAKLAA-SSFDSIVNGGDAV---KEHLAAGSTAVAVAHVQAKAL 368 + ++ HK A+ + Q LAA S F + DA ++HL AG A +V + L Sbjct: 180 LLARAHKARALARLLRQTALAAFSDFKRLQRQSDARHVRQQHLRAGGAAASVPRAPLRRL 239 Query: 369 ITAQPADIAGPSEAAMESPK 428 + A+ A PSE + +P+ Sbjct: 240 LNAKCAYRPPPSERSRGAPR 259
>HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)| Length = 388 Score = 30.4 bits (67), Expect = 2.4 Identities = 30/88 (34%), Positives = 40/88 (45%) Frame = +3 Query: 189 SAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKAL 368 +AA ++C MA A AAS++ S G+A AA + A A A A A Sbjct: 77 AAAAAAAANQCRNLMAHPAPLAPGAASAYSSAP--GEAPPSAAAAAAAAAAAAAAAAAAS 134 Query: 369 ITAQPADIAGPSEAAMESPKGPSRCSTC 452 + P AGP AA E+ K +CS C Sbjct: 135 SSGGPGP-AGP--AAAEAAK---QCSPC 156
>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding| protein MBD2) (Demethylase) (DMTase) Length = 411 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +2 Query: 317 CCWQHSGGSCSRSGEGADHRTAC*HRWSQRGGHGEPQRPKPVQHLQKEG 463 CC + G + G GA +A ++GG G P PV +++EG Sbjct: 10 CCPEQEEGESAAGGSGAGGDSAI-----EQGGQGSALAPSPVSGVRREG 53
>MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding| protein MBD2) Length = 414 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +2 Query: 317 CCWQHSGGSCSRSGEGADHRTAC*HRWSQRGGHGEPQRPKPVQHLQKEG 463 CC + G + G GA +A ++GG G P PV +++EG Sbjct: 10 CCPEQEEGESAAGGSGAGGDSAI-----EQGGQGSALAPSPVSGVRREG 53
>TBCE_BOVIN (Q32KS0) Tubulin-specific chaperone E (Tubulin-folding cofactor E)| Length = 528 Score = 30.0 bits (66), Expect = 3.1 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 350 RSGEGADHRTAC*HRWSQRGGHGEPQRPKP 439 R G D+R A + W + GGH +P++ +P Sbjct: 379 RRGAELDYRKAFGNEWKKAGGHQDPEKNRP 408
>RS3_ENCCU (Q8SQM3) 40S ribosomal protein S3| Length = 228 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = +3 Query: 237 MKQEQAKLAASSFDSIVNGGDAVKEHLAAG----STAVAVAHVQAKALITAQPADIAGPS 404 +K ++AK +++ GDAVK+++ G T V +Q + ++ P + GP+ Sbjct: 153 LKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPN 212
>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase XNP) (X-linked nuclear protein) (dXNP) (d-xnp) Length = 1311 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/82 (26%), Positives = 37/82 (45%) Frame = +3 Query: 225 KEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPS 404 KE + + + +S +SI A KE + + A+ + + ++++ + A S Sbjct: 175 KEAQQTKPEKNSSKASKESIEKRQKAQKEATTSSARAIRSVNGTRRGSLSSERSSRASSS 234 Query: 405 EAAMESPKGPSRCSTCRKRVGL 470 A ESP P RC KRV L Sbjct: 235 RA--ESPPRPKRCVVRLKRVSL 254
>DNAK_CYAME (Q85FW4) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/70 (25%), Positives = 26/70 (37%) Frame = +3 Query: 198 TMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITA 377 T ++ +C K + AKL+ D +V L GST + K L+ Sbjct: 304 TSDLIERCRKPVEQALTDAKLSKQDIDEVV---------LVGGSTRIPAVQQLVKDLLGK 354 Query: 378 QPADIAGPSE 407 QP P E Sbjct: 355 QPNQSVNPDE 364
>IF37_SCHPO (O94236) Eukaryotic translation initiation factor 3 subunit 7| homolog (Microtubule-destabilizing protein moe1) Length = 567 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = +3 Query: 237 MKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAM 416 MK KLA + ++++ G D++K + S A H ++ +PAD+A ++ Sbjct: 451 MKNNSCKLARWTVEALLAGVDSMKVGFVSRSNARDAQHHGILGVVAYKPADLASQMNLSL 510 Query: 417 ESPKG 431 + G Sbjct: 511 SNGWG 515
>TBCE_RAT (Q5FVQ9) Tubulin-specific chaperone E (Tubulin-folding cofactor E)| Length = 524 Score = 29.3 bits (64), Expect = 5.3 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 350 RSGEGADHRTAC*HRWSQRGGHGEPQRPKP 439 R G D+R A W + GGH +P R +P Sbjct: 375 RRGAELDYRKAFGKEWRKAGGHPDPDRNRP 404
>LCE1D_HUMAN (Q5T752) Late cornified envelope protein 1D (Late envelope protein| 4) Length = 114 Score = 29.3 bits (64), Expect = 5.3 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +2 Query: 278 QHRQRWRCGERAPCCWQHSGGSCSRSGEGADHRTAC 385 +HR R + + CC Q SGGS G + H C Sbjct: 78 RHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGC 113
>DNAK_PORUM (P69377) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 620 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/67 (29%), Positives = 25/67 (37%) Frame = +3 Query: 207 MCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPA 386 + KC + + AKL ASS D +V L GST + K LI P Sbjct: 305 LIDKCSIPVNNALKDAKLEASSIDEVV---------LVGGSTRIPAIQQMVKRLIGKDPN 355 Query: 387 DIAGPSE 407 P E Sbjct: 356 QSVNPDE 362
>DNAK_PORPU (P69376) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 620 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/67 (29%), Positives = 25/67 (37%) Frame = +3 Query: 207 MCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPA 386 + KC + + AKL ASS D +V L GST + K LI P Sbjct: 305 LIDKCSIPVNNALKDAKLEASSIDEVV---------LVGGSTRIPAIQQMVKRLIGKDPN 355 Query: 387 DIAGPSE 407 P E Sbjct: 356 QSVNPDE 362
>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)| Length = 1687 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +3 Query: 87 PLIS*LTKAME-HKETGCQSREGPILCVNNCG 179 P I+ KA+ H TGCQ R P+LC CG Sbjct: 842 PFITRREKALNLHSRTGCQGRREPLLC-PECG 872
>TBCE_MOUSE (Q8CIV8) Tubulin-specific chaperone E (Tubulin-folding cofactor E)| Length = 524 Score = 28.9 bits (63), Expect = 6.9 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 350 RSGEGADHRTAC*HRWSQRGGHGEPQRPKP 439 R G D+R A + W + GGH +P + +P Sbjct: 375 RRGAELDYRKAFGNEWRKAGGHPDPDKNRP 404
>VPH_BPP2 (P26700) Probable tail fiber protein (GpH)| Length = 669 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 Query: 228 EMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIA 395 E + + A L A F + + ++ E LAA AV A+ A TAQ A A Sbjct: 161 EQSRRHPDASLTAKGFTQLSSATNSTSETLAATPKAVKAAYDLANGKYTAQDATTA 216
>PO2F1_XENLA (P16143) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) (XOct1) Length = 760 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = +3 Query: 225 KEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIA 395 ++M ++Q QA+L A++ N ++H AAG+T A A + +QP IA Sbjct: 136 QQMLLQQAQAQLLAAAVQHSAN-----QQHNAAGATISASAATPMTQIPLSQPIQIA 187
>HXA13_MOUSE (Q62424) Homeobox protein Hox-A13 (Hox-1.10)| Length = 386 Score = 28.5 bits (62), Expect = 9.1 Identities = 24/88 (27%), Positives = 35/88 (39%) Frame = +3 Query: 189 SAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKAL 368 +AA ++C MA A AA+++ S G+A AA + A A A A A Sbjct: 77 AAAAAAAANQCRNLMAHPAPLAPGAAAAYSSAP--GEAPPSAAAAAAAAAAAAAAAAAA- 133 Query: 369 ITAQPADIAGPSEAAMESPKGPSRCSTC 452 + GP A + +CS C Sbjct: 134 -----SSSGGPGPAGPAGAEAAKQCSPC 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,428,162 Number of Sequences: 219361 Number of extensions: 1068390 Number of successful extensions: 3676 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3505 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3664 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
