Clone Information

BLAST Search Result

Clone Name	basdc18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y1739_STRPN (P67282) UPF0144 protein SP1739	36	0.067
2	Y1584_STRR6 (P67283) UPF0144 protein spr1584	36	0.067
3	MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12...	35	0.088
4	USO1_YEAST (P25386) Intracellular protein transport protein USO1...	35	0.15
5	MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A ...	35	0.15
6	CING_MOUSE (P59242) Cingulin	33	0.33
7	SPC97_YEAST (P38863) Spindle pole body component SPC97	33	0.33
8	CHM2B_BRARE (Q6NXD2) Charged multivesicular body protein 2b (Chr...	33	0.33
9	CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)	33	0.44
10	PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presyna...	33	0.57
11	KPC1_YEAST (P24583) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)	33	0.57
12	TF3B_HUMAN (Q92994) Transcription factor IIIB 90 kDa subunit (TF...	33	0.57
13	TF3B_MOUSE (Q8CFK2) Transcription factor IIIB 90 kDa subunit (TF...	33	0.57
14	PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy...	33	0.57
15	PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)	32	0.74
16	CING_HUMAN (Q9P2M7) Cingulin	32	0.74
17	FRPA_NEIMB (Q9K0K9) Iron-regulated protein frpA	31	1.7
18	ACCA_MANSM (Q65UI5) Acetyl-coenzyme A carboxylase carboxyl trans...	31	1.7
19	DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)	31	1.7
20	LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only...	31	1.7
21	DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain pro...	31	1.7
22	MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle II...	31	2.2
23	MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein ...	31	2.2
24	KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase ...	31	2.2
25	TIG_OCEIH (Q8CXB7) Trigger factor (TF)	31	2.2
26	DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain pro...	31	2.2
27	RNF17_HUMAN (Q9BXT8) RING finger protein 17	31	2.2
28	BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protei...	30	2.8
29	RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase	30	2.8
30	PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)	30	2.8
31	MYO1_CAEEL (P02567) Myosin-1 (Myosin heavy chain D) (MHC D)	30	2.8
32	SAP1_SCHPO (P40847) Switch-activating protein 1	30	2.8
33	CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) ...	30	3.7
34	FRPA_NEIMC (P55126) Iron-regulated protein frpA	30	3.7
35	TIG_BACHD (Q9K8F3) Trigger factor (TF)	30	3.7
36	FRPC_NEIMC (P55127) Iron-regulated protein frpC	30	3.7
37	FRPC_NEIMB (Q9JYV5) Iron-regulated protein frpC	30	3.7
38	IF2P_PYRAB (Q9UZK7) Probable translation initiation factor IF-2 ...	30	4.8
39	Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/E...	30	4.8
40	PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)	30	4.8
41	K2C4_MOUSE (P07744) Keratin, type II cytoskeletal 4 (Cytokeratin...	30	4.8
42	UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-f...	30	4.8
43	RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore...	29	6.3
44	MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2 (I...	29	6.3
45	DNLI_YEAST (P04819) DNA ligase I, mitochondrial precursor (EC 6....	29	6.3
46	MYH10_BOVIN (Q27991) Myosin-10 (Myosin heavy chain, nonmuscle II...	29	6.3
47	K0494_HUMAN (O75071) Protein KIAA0494	29	6.3
48	MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Ac...	29	8.2
49	RBP26_HUMAN (Q68DN6) Ran-binding protein 2-like 6 (RanBP2L6)	29	8.2
50	MYH10_RAT (Q9JLT0) Myosin-10 (Myosin heavy chain, nonmuscle IIb)...	29	8.2
51	MYH10_MOUSE (Q61879) Myosin-10 (Myosin heavy chain, nonmuscle II...	29	8.2
52	HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)	29	8.2
53	POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat pr...	29	8.2
54	ATIF1_CAEEL (P37209) ATPase inhibitor homolog, mitochondrial pre...	29	8.2

>Y1739_STRPN (P67282) UPF0144 protein SP1739|
          Length = 534

 Score = 35.8 bits (81), Expect = 0.067
 Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = +2

Query: 155 DAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQ 334
           +A  +A    G  +R+ ++L   A  +++ ++    L+ +     K+ ++ D EF    +
Sbjct: 38  NAEQEATNLRGQAEREADLLVNEAKRESKSLKKEALLEAKEE-ARKYREEVDAEF----K 92

Query: 335 NAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 496
           +  +EL QI  ++ ER       D  + S E+T E + Q I    + L+  E+ +EE + 
Sbjct: 93  SERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVER 152

Query: 497 E 499
           +
Sbjct: 153 Q 153

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>Y1584_STRR6 (P67283) UPF0144 protein spr1584|
          Length = 534

 Score = 35.8 bits (81), Expect = 0.067
 Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = +2

Query: 155 DAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQ 334
           +A  +A    G  +R+ ++L   A  +++ ++    L+ +     K+ ++ D EF    +
Sbjct: 38  NAEQEATNLRGQAEREADLLVNEAKRESKSLKKEALLEAKEE-ARKYREEVDAEF----K 92

Query: 335 NAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 496
           +  +EL QI  ++ ER       D  + S E+T E + Q I    + L+  E+ +EE + 
Sbjct: 93  SERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVER 152

Query: 497 E 499
           +
Sbjct: 153 Q 153

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>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin|
            phosphatase-targeting subunit 1) (Myosin phosphatase
            target subunit 1) (Protein phosphatase myosin-binding
            subunit)
          Length = 1030

 Score = 35.4 bits (80), Expect = 0.088
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
 Frame = +2

Query: 257  NFLDERSAYLTKFTKDADTEFDMIGQNAMKELD----QIGDQIMERLDSKMQSYEETAEM 424
            ++L+ER  Y ++  KD  T+F  + +  + E +    Q+ D  ME  D K+Q  + T   
Sbjct: 912  SYLEERKPYSSRLEKDDSTDFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQ 971

Query: 425  Q----RQEIEMNERVLEDFEDWIEEEKNE 499
            +    R  +EM +R     E  I E + E
Sbjct: 972  ERFADRSLLEMEKRERRALERRISEMEEE 1000

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>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)|
          Length = 1790

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 22/102 (21%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
 Frame = +2

Query: 212  LAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDS 391
            L+   +L+ ++  I +  DE  +Y  K T++ D +   I ++  ++L+ + +Q+    +S
Sbjct: 1420 LSNDELLEEKQNTIKSLQDEILSYKDKITRN-DEKLLSIERDNKRDLESLKEQLRAAQES 1478

Query: 392  K------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
            K      ++  EE +  ++ E+E ++ +++  E  IE  + E
Sbjct: 1479 KAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETE 1520

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>MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A (Myosin|
            phosphatase-targeting subunit 1) (Myosin phosphatase
            target subunit 1) (Protein phosphatase myosin-binding
            subunit) (MBSP) (Serine/threonine protein phosphatase PP1
            smooth muscle reg
          Length = 1032

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
 Frame = +2

Query: 257  NFLDERSAYLTKFTKDADTEFDMIGQNAMKELD----QIGDQIMERLDSKMQSYEETAEM 424
            ++L+ER  Y ++  KD  T+F  + +  + E +    Q+ D  ME  D K+Q  + T   
Sbjct: 914  SYLEERKPYGSRLEKDDSTDFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQ 973

Query: 425  Q----RQEIEMNERVLEDFEDWIEEEKNE 499
            +    R  +EM +R     E  I E + E
Sbjct: 974  ERFADRSLLEMEKRERRALERRISEMEEE 1002

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>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
 Frame = +2

Query: 143  SSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAY---LTKFTKDADT 313
            ++ E+ G+ A      + R  E    +A L  ++  +   L+E       L +   + + 
Sbjct: 771  AAQEEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEE 830

Query: 314  EFDMIGQNA---MKELDQIGDQ---IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 475
            +  ++ +      KEL+QIGD     +++L ++M+ Y+E A   R+E+   +R  +D+  
Sbjct: 831  QKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKA---RKEVADAQRQAKDWAS 887

Query: 476  WIEEEKNEG 502
              E EKN G
Sbjct: 888  --EAEKNSG 894

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>SPC97_YEAST (P38863) Spindle pole body component SPC97|
          Length = 823

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = +2

Query: 227 MLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ--IMERLDSKMQ 400
           +LQ     I  FL++   YL    +  + +F+ +   +++EL+QI ++  + ++++    
Sbjct: 134 VLQRFAYEIRRFLED--VYLKTLVERLERDFNKVPNFSIRELEQIINETEVNKQMELLYN 191

Query: 401 SYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
            YEE    + +E   N+   EDF ++++  KNE
Sbjct: 192 IYEEIFR-EIEERRTNQSSQEDFNNFMDSMKNE 223

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>CHM2B_BRARE (Q6NXD2) Charged multivesicular body protein 2b|
           (Chromatin-modifying protein 2b) (CHMP2b)
          Length = 214

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
 Frame = +2

Query: 188 GDQRQQEVLAK-IAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIG 364
           G++   +VLAK +  ++ QK R T  +  +   ++  TK  +++  M G  AM    +  
Sbjct: 53  GNRDACKVLAKQLVQVRKQKTR-TYAVSSKVTSMSTQTKLMNSQMKMAG--AMATTTKTM 109

Query: 365 DQIMERLDSK-----MQSYE-ETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
             + +++D K     +Q+++ ETA+M   E  MN+ + E FED  +EE+++
Sbjct: 110 QAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQ 160

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>CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)|
          Length = 2663

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 17/90 (18%), Positives = 43/90 (47%)
 Frame = +2

Query: 230  LQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYE 409
            ++T+ +R+T  L E    +   TK+ D +   + +    E DQ+ + + E +   ++  E
Sbjct: 1663 IETENIRLTQILHENLEEMRSVTKERD-DLRSVEETLKVERDQLKENLRETITRDLEKQE 1721

Query: 410  ETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
            E  ++    ++ ++  ++     + E+ NE
Sbjct: 1722 E-LKIVHMHLKEHQETIDKLRGIVSEKTNE 1750

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>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein)
          Length = 5085

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = +2

Query: 191  DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 370
            D++QQ++  +  +L+ +K++   F +E      +  +  + E  M+ Q  ++EL  +   
Sbjct: 3153 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3211

Query: 371  IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 493
            ++ + + + Q+     +ET   Q+ ++E  +++ +     +EE+K
Sbjct: 3212 LLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3256

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>KPC1_YEAST (P24583) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)|
          Length = 1151

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
 Frame = +2

Query: 146 SSEDAGSDAPLPHGGDQRQQEVLAKIAMLQTQ-KVRITNFLDERSAYLTKFTKDADTEFD 322
           S +  G D+P      ++   ++ K   LQT  + ++  F+DE  AYL  FT+ A    +
Sbjct: 601 SPQKVGRDSPT-----KQHDPIIDKKISLQTHGREKLNKFIDENEAYL-NFTEGAQQTAE 654

Query: 323 MIGQNAMKELDQIGDQ----IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEE 490
               +  K LD   ++    + +      Q++E   ++ R E+E+ +   E+ E  I+++
Sbjct: 655 F--SSPEKTLDPTSNRRSLGLTDLSIEHSQTWESKDDLMRDELELWKAQREEMELEIKQD 712

Query: 491 KNE 499
             E
Sbjct: 713 SGE 715

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>TF3B_HUMAN (Q92994) Transcription factor IIIB 90 kDa subunit (TFIIIB90)|
           (hTFIIIB90) (B-related factor 1) (BRF-1) (hBRF) (TATA
           box-binding protein-associated factor, RNA polymerase
           III, subunit 2) (TAF3B2)
          Length = 677

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
 Frame = +2

Query: 107 VHQSRRRFSICKSSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQ-TQKVRITNFLDERSAY 283
           +H  RR   +C ++   A       H   +  +EV++ + + + T + R+T F D  ++ 
Sbjct: 219 MHTGRRPSGLCGAALLVAAR----MHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQ 274

Query: 284 LT--KFTK-DADTEFDMIGQNA------MKELDQIGDQIMERLDSKMQSYEETAEMQ 427
           LT  +F K D + E D     A      MK+L+Q+  + +E ++ ++ SY++  E++
Sbjct: 275 LTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISSYQDAIEIE 331

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>TF3B_MOUSE (Q8CFK2) Transcription factor IIIB 90 kDa subunit (TFIIIB90)|
           (hTFIIIB90) (B-related factor 1) (BRF-1)
          Length = 676

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
 Frame = +2

Query: 107 VHQSRRRFSICKSSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQ-TQKVRITNFLDERSAY 283
           +H  RR   +C ++   A       H   +  +EV++ + + + T + R+T F D  ++ 
Sbjct: 219 MHTGRRPSGLCGAALLVAAR----MHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQ 274

Query: 284 LT--KFTK-DADTEFDMIGQNA------MKELDQIGDQIMERLDSKMQSYEETAEMQ 427
           LT  +F K D + E D     A      MK+L+Q+  + +E ++ ++ SY++  E++
Sbjct: 275 LTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISSYQDAIEIE 331

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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = +2

Query: 191  DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 370
            D++QQ++  +  +L+ +K++   F +E      +  +  + E  M+ Q  ++EL  +   
Sbjct: 3107 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3165

Query: 371  IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 493
            ++ + + + Q+     +ET   Q+ ++E  +++ +     +EE+K
Sbjct: 3166 LLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3210

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>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = +2

Query: 191  DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 370
            D++QQ++  +  +L+ +K++   F +E      +  +  + E  M+ Q  ++EL  +   
Sbjct: 3139 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3197

Query: 371  IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 493
            ++ + + + Q+     +ET   Q+ ++E  +++ +     +EE+K
Sbjct: 3198 LLFQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3242

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>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
 Frame = +2

Query: 143  SSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKD-ADTE- 316
            +S E+ GS A      + R +E    +A L  ++  +   L+E         +  A+ E 
Sbjct: 777  ASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEE 836

Query: 317  ----FDMIGQNAMKELDQIGD---QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 475
                 D       KEL++IG+   Q +++L ++++ Y+E A   R+E+   +R  +D+  
Sbjct: 837  QKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKA---RREVADAQRQAKDWAS 893

Query: 476  WIEEEKNEG 502
              E EK  G
Sbjct: 894  --EAEKTSG 900

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>FRPA_NEIMB (Q9K0K9) Iron-regulated protein frpA|
          Length = 1302

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 296 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 466
           TK AD  F   G  A+ ELD  GD I+   D+  QS     ++ +  I + NE R LE+
Sbjct: 353 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQSLRVWQDLNQDGISQANELRTLEE 411

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>ACCA_MANSM (Q65UI5) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 321

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +2

Query: 275 SAYLTKFTKDADTEFDMIGQNA--MKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN 448
           ++ L K  + A T  +++G  A  +KEL+ I + + E L    + Y+E A+  +Q     
Sbjct: 236 ASILWKSAEKASTAAEVMGLTASRLKELELIDNIVTEPLGGAHRQYDEMAQALKQ----- 290

Query: 449 ERVLEDFED 475
            R+L D ED
Sbjct: 291 -RILSDLED 298

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>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)|
          Length = 706

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = +2

Query: 194 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 373
           QR    LA+++     ++R+    +      T    DA  E   I +    E  +  +++
Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189

Query: 374 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
            +       LD++++  +E  E +RQE E  ER   + E  IEE + +
Sbjct: 190 RKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHRRK 237

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>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)|
          Length = 1683

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +2

Query: 344  KELDQIGDQIMERLDSKMQSYEETAEMQRQEI--EMNERV-LEDFEDWIEE 487
            K LDQIG+    +  SK +     AE++RQ+I  EM +R  L +   WI +
Sbjct: 1439 KYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQ 1489

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>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain protein)|
          Length = 705

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = +2

Query: 194 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 373
           QR    LA+++     ++R+    +      T    DA  E   I +    E  +  +++
Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189

Query: 374 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
            +       LD++++  +E  E +RQE E  ER   + E  IEE + +
Sbjct: 190 RKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHRRK 237

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>MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
 Frame = +2

Query: 188  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 367
            GD+ + E+  K + LQ +   ++  L+E      KF KDA +                  
Sbjct: 1271 GDRLRVELAEKASKLQNELDNVSTLLEEAEKKGIKFAKDAAS------------------ 1312

Query: 368  QIMERLDSKMQSYEE-TAEMQRQEIEMNERVLEDFEDWIEEEKN 496
                 L+S++Q  +E   E  RQ++ ++ R+ +     +EEEKN
Sbjct: 1313 -----LESQLQDTQELLQEETRQKLNLSSRIRQ-----LEEEKN 1346

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>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)|
           (MyT1-L)
          Length = 1186

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +2

Query: 296 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 475
           T+D D + +  G+   ++ D+ GD+  E  +   +  EE  E    + E  E V ++ E+
Sbjct: 96  TEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEE 155

Query: 476 WIEEEKNE 499
             EEE+ E
Sbjct: 156 EEEEEEEE 163

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>KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV)
          Length = 469

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = +2

Query: 296 TKDADTEFDMIGQNAMKELDQIGDQIMERLDS----KMQSYEETAEMQRQEIEMNERVLE 463
           T+DA    D++G+  M+E DQ  DQ+     +    K+QS E   +   +E E +  V +
Sbjct: 358 TQDAKDSTDLLGKK-MQEEDQEEDQVEAEASADEMRKLQSEEVEKDAGVKEEETSSMVPQ 416

Query: 464 DFEDWIEEEKNE 499
           D ED +E +  E
Sbjct: 417 DPEDELETDDPE 428

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>TIG_OCEIH (Q8CXB7) Trigger factor (TF)|
          Length = 428

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +2

Query: 326 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNER 454
           I +   KEL ++ D+  + +D +++S +E  + +R E+E N++
Sbjct: 239 INEVKAKELPELDDEFAKDVDEEVESLDELKKKKRNELETNKK 281

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>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)|
          Length = 648

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
 Frame = +2

Query: 194 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 373
           QR    LA+++     ++R+    +      T    DA  E   I +    E  +  +++
Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189

Query: 374 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
            +       LD +++  +E  E +RQE E  ER   + E  IEE + +
Sbjct: 190 RKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEHRRK 237

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>RNF17_HUMAN (Q9BXT8) RING finger protein 17|
          Length = 653

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
 Frame = +2

Query: 179 PHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ 358
           P  G  ++  ++ K+   +T K    +F        T   + A T+  ++  +A+     
Sbjct: 88  PMAGYIKEDSIMEKLQP-KTIKNCSQDFKKTADQLTTGLERSASTDKTLLNSSAVMLDTN 146

Query: 359 IGDQIMERLDSKMQSYEETA-------EMQRQEIEMNERVLEDFEDWIEE 487
             ++I E L++   S+E+ +        MQ+Q IE  ERV+E  E   ++
Sbjct: 147 TAEEIDEALNTAHHSFEQLSIAGKALEHMQKQTIEERERVIEVVEKQFDQ 196

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>BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protein 1) (Lens|
           fiber cell beaded-filament structural protein CP 115)
           (CP115) (Lens intermediate filament-like heavy) (LIFL-H)
          Length = 665

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 350 LDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE 463
           L+Q      E  D ++Q Y E  E  R+EIE  ERVLE
Sbjct: 249 LEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLE 286

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>RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase|
          Length = 1070

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = +2

Query: 263 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 442
           L+E+ + L     +  T+       A+KE +  GD  +  LDS+MQS        + EIE
Sbjct: 417 LEEKESLLRDRKNEVSTKLGF----ALKEKES-GDASLRELDSEMQSCRVAVSKGKSEIE 471

Query: 443 MNERVLEDFEDWI---EEEKNE 499
             E+ + D    +   +E+K+E
Sbjct: 472 ALEKEIRDNSKAVLDFQEQKSE 493

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>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +2

Query: 368  QIMERLDSKMQSYEETAEMQRQEIEMN----ERVLEDFEDWIEE 487
            Q +E L  ++Q  EE AE+Q  E+E N    E  +ED    I+E
Sbjct: 1815 QALEALQQRLQGAEEAAELQLAELERNVALREAEVEDMASRIQE 1858

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>MYO1_CAEEL (P02567) Myosin-1 (Myosin heavy chain D) (MHC D)|
          Length = 1938

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 23/92 (25%), Positives = 42/92 (45%)
 Frame = +2

Query: 188  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 367
            G +  QEV   +  L+ +K  + + LDE  A L       + E   +      E+ QI  
Sbjct: 1526 GGRTYQEVHKSVRRLEQEKDELQHALDEAEAAL-------EAEESKV-LRLQIEVQQIRS 1577

Query: 368  QIMERLDSKMQSYEETAEMQRQEIEMNERVLE 463
            +I +R+  K + +E T +  ++ +E  +  LE
Sbjct: 1578 EIEKRIQEKEEEFENTRKNHQRALESIQASLE 1609

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>SAP1_SCHPO (P40847) Switch-activating protein 1|
          Length = 254

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +2

Query: 347 ELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 496
           ELDQ+ D+   RL S++Q Y E   + +++ + N+ + E  +   EE++N
Sbjct: 111 ELDQLCDEWKARL-SELQQYREKFLVGKRKCDCNDEINERLKKLTEEQQN 159

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>CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) [Contains:|
           Caspase-8 subunit p18; Caspase-8 subunit p10]
          Length = 480

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +2

Query: 323 MIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERV 457
           M+ +N ++ L  I DQ+ + L  K++ YE ++  +R  +E  E +
Sbjct: 151 MLAENNLETLKSICDQVNKSLLGKIEDYERSSTERRMSLEGREEL 195

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>FRPA_NEIMC (P55126) Iron-regulated protein frpA|
          Length = 1115

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 296 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 466
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 366 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 424

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>TIG_BACHD (Q9K8F3) Trigger factor (TF)|
          Length = 431

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 24/108 (22%), Positives = 47/108 (43%)
 Frame = +2

Query: 176 LPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELD 355
           LP   D+  ++V  ++  L   K ++   L++  A+     K  DT      +NA  ++ 
Sbjct: 247 LPELDDEFAKDVDEEVESLDELKKKLREKLEKDRAHEADHEK-RDTLIQKASENATIDIP 305

Query: 356 QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
           +    I   LD   Q +E+  +MQ   +EM  +     ++ + E+  E
Sbjct: 306 EA--MINTELDRMTQEFEQRLQMQGMNLEMYFQFSGQTQEQLREQMKE 351

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>FRPC_NEIMC (P55127) Iron-regulated protein frpC|
          Length = 1829

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 296 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 466
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538

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>FRPC_NEIMB (Q9JYV5) Iron-regulated protein frpC|
          Length = 1829

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 296 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 466
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538

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>IF2P_PYRAB (Q9UZK7) Probable translation initiation factor IF-2 [Contains: Pab|
            infB intein (Pab IF2 intein)]
          Length = 992

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 27/128 (21%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
 Frame = +2

Query: 170  APLPHGGDQRQQEVLAKI--AMLQTQKVRI-------------TNFLDERSAYLTKFTKD 304
            AP P   ++ +QE+L +I   ++ T KV +             +  L E+   + K    
Sbjct: 723  APTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKADVG 782

Query: 305  ADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFED 475
              ++ D++   ++KE +     I+       +  EE A+ +  +I +     +++ED+E+
Sbjct: 783  NVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEE 842

Query: 476  WIEEEKNE 499
            W++EE+ +
Sbjct: 843  WVKEEEEK 850

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>Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/ECU08_0040|
          Length = 592

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +2

Query: 344 KELDQIGDQIMERLDSKMQSY-----EETAEMQRQEIEMNERVLEDFED 475
           +++ + G+ ++  +DSKM+S      EE  E  R ++  +++ +E F D
Sbjct: 147 RQMARYGESLIREIDSKMESMPSEMSEEEKEKMRSDLNDDKKYVESFRD 195

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>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/103 (18%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = +2

Query: 197  RQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIM 376
            +QQ++  +  +L+ +K++   F +E      +  +  + E  M+ Q  ++EL  +   ++
Sbjct: 3119 KQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKFMV-QKKLEELQSMKHHLL 3177

Query: 377  ERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 493
             + + + Q+     +ET   Q+ ++E  +++ +     +EE+K
Sbjct: 3178 FQQEEERQAQYMMRQETLAQQQLQLEQFQQLQQQLHQQLEEQK 3220

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>K2C4_MOUSE (P07744) Keratin, type II cytoskeletal 4 (Cytokeratin-4) (CK-4)|
           (Keratin-4) (K4) (Cytoskeletal 57 kDa keratin)
          Length = 525

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 21/99 (21%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
 Frame = +2

Query: 215 AKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAM----KELDQIGDQIMER 382
           A+   ++T   +  +F+D +  +L +  K  +T+++++ Q       K LD   +  +  
Sbjct: 145 AEREQIKTLNNKFASFID-KVRFLEQQNKVLETKWNLLQQQTTTTSPKSLDPFFETYINA 203

Query: 383 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
           L   + +        + E++M +  +EDF+   EEE N+
Sbjct: 204 LRKNLDTLSNDKGRLQSELKMMQDSVEDFKTKYEEEINK 242

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>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-frameshift|
           suppressor 3)
          Length = 387

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 14/89 (15%)
 Frame = +2

Query: 275 SAYLTKFTKDADTEFDMIG-----------QNAMKEL---DQIGDQIMERLDSKMQSYEE 412
           S Y+ KFT+ +  +  ++G            N+MK+L   D+   Q    L S  + + +
Sbjct: 185 SPYVKKFTQTSKKDAALVGTIEEDEIFKTFMNSMKQLNENDEYSFQDFSVLKSLEKEFSK 244

Query: 413 TAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
           + E++ +  E  ERVL +     ++ KN+
Sbjct: 245 SIELENKIAERTERVLTELVGTGDKVKNK 273

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>RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore complex|
           protein Nup358) (Nucleoporin Nup358) (358 kDa
           nucleoporin) (P270)
          Length = 3224

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +2

Query: 197 RQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIM 376
           R+ E +   A+   ++    N+L +   YL K   D+D+   ++     K+L    + + 
Sbjct: 689 RKAEDIENDALSPEEQEECKNYLRKTRDYLIKIIDDSDSNLSVV-----KKLPVPLESVK 743

Query: 377 ERLDSKMQSYEETAE 421
           E L+S MQ  E+ +E
Sbjct: 744 EMLNSVMQELEDYSE 758

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>MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2|
           (Interferon-regulated resistance GTP-binding protein
           MxB) (p78-related protein)
          Length = 715

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 39/133 (29%)
 Frame = +2

Query: 200 QQEVLAKIAMLQTQKVRITNF---------LDERSAYLTKFTKDADTEFDM--------- 325
           QQE+  ++++ +  K  IT F         L+E SA + +  +   TE  M         
Sbjct: 330 QQEITNRLSLAEATKKEITFFQTHPYFRVLLEEGSATVPRLAERLTTELIMHIQKSLPLL 389

Query: 326 ------IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE--------------- 442
                   Q A +EL + G  I  +   KM    E  +M  Q+IE               
Sbjct: 390 EGQIRESHQKATEELRRCGADIPSQEADKMFFLIEKIKMFNQDIEKLVEGEEVVRENETR 449

Query: 443 MNERVLEDFEDWI 481
           +  ++ EDF++W+
Sbjct: 450 LYNKIREDFKNWV 462

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>DNLI_YEAST (P04819) DNA ligase I, mitochondrial precursor (EC 6.5.1.1)|
           (Polydeoxyribonucleotide synthase [ATP])
          Length = 755

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
 Frame = +2

Query: 251 ITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIG-----------DQIMERLDSKM 397
           I   L ER  YLTK TK    EF    Q     LD++            + +M ++    
Sbjct: 522 INKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDESVNHSCEGLMVKMLEGP 581

Query: 398 QSYEETAEMQRQEIEMNERVLEDFEDWIE 484
           +S+ E ++  R  +++ +  LE   D ++
Sbjct: 582 ESHYEPSKRSRNWLKLKKDYLEGVGDSLD 610

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>MYH10_BOVIN (Q27991) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
 Frame = +2

Query: 188  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDA--------DTEFDMIGQNAM 343
            GD+ + E+  K   LQ +   ++  L+E      KF KDA        DT+ +++ +   
Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQ-ELLQEETR 1329

Query: 344  KELDQIGDQI--MERLDSKMQSYEETAEMQRQEIEMNERVLE 463
            ++L+ +  +I  +E   S +Q  +E  E  R+ +E   + L+
Sbjct: 1330 QKLN-LSSRIRQLEEERSSLQEQQEEEEEARRSLEKQLQALQ 1370

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>K0494_HUMAN (O75071) Protein KIAA0494|
          Length = 495

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 236 TQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDS-KMQSYEE 412
           TQ+V   N ++     ++K  K A+  F M+G  +     Q  DQ+  R D+ K+QS ++
Sbjct: 303 TQRV---NLIESDVVAMSKVEKKANLSFSMMGDRSATLKRQSLDQVTNRTDTVKIQSIKK 359

Query: 413 TAEMQRQEIEMNERV 457
                 Q  ++ E++
Sbjct: 360 EDSSNSQVSKLREKL 374

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>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking|
            family 7)
          Length = 5327

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 22/101 (21%), Positives = 46/101 (45%)
 Frame = +2

Query: 197  RQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIM 376
            R QE+L++            +FLD+ S  LT   +          Q   ++L ++ +Q  
Sbjct: 1750 RHQELLSQQQNFIVATQSAQSFLDQHSHNLTPEER----------QKLQEKLGELKEQYA 1799

Query: 377  ERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 499
              L       ++T  + R E++   +  ++FE+W+++ +NE
Sbjct: 1800 ASLARSEAELKQTQAL-RDELQKFLQDHKEFENWLQQSENE 1839

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>RBP26_HUMAN (Q68DN6) Ran-binding protein 2-like 6 (RanBP2L6)|
          Length = 1748

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 19/75 (25%), Positives = 35/75 (46%)
 Frame = +2

Query: 197 RQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIM 376
           R+ E +   A+   ++    N+L +   YL K   D+D+   ++     K+L    + + 
Sbjct: 680 RKAEDIENDAVFPEEQEECKNYLRKTRDYLIKIIDDSDSNLSVV-----KKLPVPLESVK 734

Query: 377 ERLDSKMQSYEETAE 421
           E L S MQ  E+ +E
Sbjct: 735 EMLKSVMQELEDYSE 749

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>MYH10_RAT (Q9JLT0) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
 Frame = +2

Query: 188  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 367
            GD+ + E+  K   LQ +   ++  L+E      KF KDA                    
Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGMKFAKDA-------------------- 1310

Query: 368  QIMERLDSKMQSYEE-TAEMQRQEIEMNERVLEDFEDWIEEEKN 496
                 L+S++Q  +E   E  RQ++ ++ R+ +     +EEEKN
Sbjct: 1311 ---AGLESQLQDTQELLQEETRQKLNLSSRIRQ-----LEEEKN 1346

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>MYH10_MOUSE (Q61879) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
 Frame = +2

Query: 188  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 367
            GD+ + E+  K   LQ +   ++  L+E      KF KDA                    
Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGIKFAKDA-------------------- 1310

Query: 368  QIMERLDSKMQSYEE-TAEMQRQEIEMNERVLEDFEDWIEEEKN 496
                 L+S++Q  +E   E  RQ++ ++ R+ +     +EEEKN
Sbjct: 1311 ---AGLESQLQDTQELLQEETRQKLNLSSRIRQ-----LEEEKN 1346

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>HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 382

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
 Frame = +2

Query: 302 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-----MQRQEIEMN-ERVLE 463
           DA  EF+ I    + +L  I D+ +++   ++ + E+  +     + +Q  ++N E VL+
Sbjct: 256 DAVREFENINLYTIDDLRNISDKNLQKRIEEVPAVEKIIDEEYDVLMKQIEKINVEEVLK 315

Query: 464 DFEDWIEE 487
           DF ++IEE
Sbjct: 316 DFNNYIEE 323

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>POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat protein;|
           Protease (EC 3.4.23.-); Reverse transcriptase (EC
           2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
          Length = 1675

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
 Frame = +2

Query: 191 DQRQQEVLAKIA--MLQTQKVRIT--NFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ 358
           ++ +Q ++AK+   M ++ K+ I   NF          +++  D EF+ +G    ++LDQ
Sbjct: 336 EREKQAMIAKLEAKMKESSKMAIVEDNFNPNNEYLEDTYSEYEDLEFEKLGLTGWEDLDQ 395

Query: 359 IGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 475
              +  E     +  +E   ++  +EI   + V E  ED
Sbjct: 396 DSIETEE-----ITEWENPNQVLHREIRAYKSVSEQIED 429

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>ATIF1_CAEEL (P37209) ATPase inhibitor homolog, mitochondrial precursor|
          Length = 88

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +2

Query: 299 KDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDW 478
           ++A     M+G  A +E +    Q  ++LD+  +  E      +QEI  +E+VLE  +  
Sbjct: 21  REAGGSLGMMG--ATREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQR 78

Query: 479 IEE-EKNEG 502
           ++E EK  G
Sbjct: 79  LKEIEKGHG 87


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,099,852
Number of Sequences: 219361
Number of extensions: 1006704
Number of successful extensions: 4157
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 3996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4149
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result