ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdc14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 135 2e-28
2gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4dbj|AK103846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
5dbj|AK061960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6dbj|AK058847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
7dbj|AK063571.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
8gb|BT012851.1| Lycopersicon esculentum clone 113930R, mRNA sequence 78 4e-11
9gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
10gb|BT016696.1| Zea mays clone Contig529 mRNA sequence 72 2e-09
11gb|BT017551.1| Zea mays clone EL01N0424D04.c mRNA sequence 72 2e-09
12gb|BT017416.1| Zea mays clone EL01N0401B11.c mRNA sequence 72 2e-09
13gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
15dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
16gb|U84972.1|NTU84972 Nicotiana tabacum GUT15 mRNA, complete cds 58 3e-05
17gb|U75694.1|STU75694 Solanum tuberosum SRE1b (sre1b) mRNA, compl... 54 5e-04
18gb|U75693.1|STU75693 Solanum tuberosum SRE1a (sre1a) mRNA, compl... 54 5e-04
19gb|U75695.1|STU75695 Solanum tuberosum SRE1c (sre1c) mRNA, compl... 46 0.13
20emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.51
21ref|NM_127400.2| Arabidopsis thaliana GUT15 (GENE WITH UNSTABLE ... 42 2.0
22gb|U80955.3| Caenorhabditis elegans cosmid T04C9, complete sequence 42 2.0
23gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map... 42 2.0
24dbj|AK220588.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 2.0
25emb|BX819089.1|CNS0A9QC Arabidopsis thaliana Full-length cDNA Co... 42 2.0
26emb|BX819088.1|CNS0A9PU Arabidopsis thaliana Full-length cDNA Co... 42 2.0
27emb|BX842045.1|CNS09YAE Arabidopsis thaliana Full-length cDNA Co... 42 2.0
28gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.0
29dbj|AK176672.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
30dbj|AK176632.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
31dbj|AK176884.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
32dbj|AK176857.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
33dbj|AK176840.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
34dbj|AK176476.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
35dbj|AK176315.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
36dbj|AK176067.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
37dbj|AK175993.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
38dbj|AK175682.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
39dbj|AK175669.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
40dbj|AK175384.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.0
41gb|U84973.1|ATU84973 Arabidopsis thaliana GUT15 mRNA, complete cds 42 2.0
42emb|CR933475.1| Paramecium tetraurelia, Small GTPase ras, putati... 40 8.0
43ref|XM_759868.1| Theileria parva strain Muguga hypothetical prot... 40 8.0
44gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Can... 40 8.0
45emb|AL450344.4| Human DNA sequence from clone RP11-136K14 on chr... 40 8.0
46gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Canc... 40 8.0
47emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in l... 40 8.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/121 (90%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                           
Query: 378     ggcctttgccatgttgggtgcgctcgcatggcaggccaccaccgtaataaagatg--gtt 435
               |||||||||||||||||||||||||||||||||||   |||||||||||||||||   ||
Sbjct: 6723292 ggcctttgccatgttgggtgcgctcgcatggcagg---ccaccgtaataaagatgatctt 6723348

                                                                           
Query: 436     tttgtgtctcggggggagatcgcacgggggttatcttgttttagccccgggttctccccc 495
               ||||||||  |||||||| ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 6723349 tttgtgtcctggggggagttcgcacgggggttattttg-tttagccccgggttctccccc 6723407

                
Query: 496     c 496
               |
Sbjct: 6723408 c 6723408



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                   
Query: 239     ttgtattgataattattcgatgatatttcgataattattagatctaagagat 290
               |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 6723108 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 6723159



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                                   
Query: 303     aaggtaagag--catgtaacaagcgaggtgcttgtg 336
               ||||||||||  ||||||||||||||||||||||||
Sbjct: 6723197 aaggtaagagaacatgtaacaagcgaggtgcttgtg 6723232
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>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
              complete sequence
          Length = 127946

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/121 (90%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                          
Query: 378    ggcctttgccatgttgggtgcgctcgcatggcaggccaccaccgtaataaagatg--gtt 435
              |||||||||||||||||||||||||||||||||||   |||||||||||||||||   ||
Sbjct: 108840 ggcctttgccatgttgggtgcgctcgcatggcagg---ccaccgtaataaagatgatctt 108896

                                                                          
Query: 436    tttgtgtctcggggggagatcgcacgggggttatcttgttttagccccgggttctccccc 495
              ||||||||  |||||||| ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 108897 tttgtgtcctggggggagttcgcacgggggttattttg-tttagccccgggttctccccc 108955

               
Query: 496    c 496
              |
Sbjct: 108956 c 108956



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                  
Query: 239    ttgtattgataattattcgatgatatttcgataattattagatctaagagat 290
              |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 108656 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 108707



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                                  
Query: 303    aaggtaagag--catgtaacaagcgaggtgcttgtg 336
              ||||||||||  ||||||||||||||||||||||||
Sbjct: 108745 aaggtaagagaacatgtaacaagcgaggtgcttgtg 108780
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/121 (90%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                           
Query: 378     ggcctttgccatgttgggtgcgctcgcatggcaggccaccaccgtaataaagatg--gtt 435
               |||||||||||||||||||||||||||||||||||   |||||||||||||||||   ||
Sbjct: 6722505 ggcctttgccatgttgggtgcgctcgcatggcagg---ccaccgtaataaagatgatctt 6722561

                                                                           
Query: 436     tttgtgtctcggggggagatcgcacgggggttatcttgttttagccccgggttctccccc 495
               ||||||||  |||||||| ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 6722562 tttgtgtcctggggggagttcgcacgggggttattttg-tttagccccgggttctccccc 6722620

                
Query: 496     c 496
               |
Sbjct: 6722621 c 6722621



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                   
Query: 239     ttgtattgataattattcgatgatatttcgataattattagatctaagagat 290
               |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 6722321 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 6722372



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                                   
Query: 303     aaggtaagag--catgtaacaagcgaggtgcttgtg 336
               ||||||||||  ||||||||||||||||||||||||
Sbjct: 6722410 aaggtaagagaacatgtaacaagcgaggtgcttgtg 6722445
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>dbj|AK103846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148J22, full
           insert sequence
          Length = 2465

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/121 (90%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                       
Query: 378 ggcctttgccatgttgggtgcgctcgcatggcaggccaccaccgtaataaagatg--gtt 435
           |||||||||||||||||||||||||||||||||||   |||||||||||||||||   ||
Sbjct: 616 ggcctttgccatgttgggtgcgctcgcatggcagg---ccaccgtaataaagatgatctt 672

                                                                       
Query: 436 tttgtgtctcggggggagatcgcacgggggttatcttgttttagccccgggttctccccc 495
           ||||||||  |||||||| ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 673 tttgtgtcctggggggagttcgcacgggggttattttg-tttagccccgggttctccccc 731

            
Query: 496 c 496
           |
Sbjct: 732 c 732



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 239 ttgtattgataattattcgatgatatttcgataattattagatctaagagat 290
           |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 429 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 480



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                               
Query: 303 aaggtaagag--catgtaacaagcgaggtgcttgtg 336
           ||||||||||  ||||||||||||||||||||||||
Sbjct: 518 aaggtaagagaacatgtaacaagcgaggtgcttgtg 553
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>dbj|AK061960.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G02, full
           insert sequence
          Length = 1385

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/121 (90%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                       
Query: 378 ggcctttgccatgttgggtgcgctcgcatggcaggccaccaccgtaataaagatg--gtt 435
           |||||||||||||||||||||||||||||||||||   |||||||||||||||||   ||
Sbjct: 619 ggcctttgccatgttgggtgcgctcgcatggcagg---ccaccgtaataaagatgatctt 675

                                                                       
Query: 436 tttgtgtctcggggggagatcgcacgggggttatcttgttttagccccgggttctccccc 495
           ||||||||  |||||||| ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 676 tttgtgtcctggggggagttcgcacgggggttattttg-tttagccccgggttctccccc 734

            
Query: 496 c 496
           |
Sbjct: 735 c 735



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 239 ttgtattgataattattcgatgatatttcgataattattagatctaagagat 290
           |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 435 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 486



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                               
Query: 303 aaggtaagag--catgtaacaagcgaggtgcttgtg 336
           ||||||||||  ||||||||||||||||||||||||
Sbjct: 524 aaggtaagagaacatgtaacaagcgaggtgcttgtg 559
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>dbj|AK058847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-G07, full
           insert sequence
          Length = 695

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/121 (90%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                       
Query: 378 ggcctttgccatgttgggtgcgctcgcatggcaggccaccaccgtaataaagatg--gtt 435
           |||||||||||||||||||||||||||||||||||   |||||||||||||||||   ||
Sbjct: 25  ggcctttgccatgttgggtgcgctcgcatggcagg---ccaccgtaataaagatgatctt 81

                                                                       
Query: 436 tttgtgtctcggggggagatcgcacgggggttatcttgttttagccccgggttctccccc 495
           ||||||||  |||||||| ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 82  tttgtgtcctggggggagttcgcacgggggttattttg-tttagccccgggttctccccc 140

            
Query: 496 c 496
           |
Sbjct: 141 c 141
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>dbj|AK063571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G06, full
           insert sequence
          Length = 585

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 239 ttgtattgataattattcgatgatatttcgataattattagatctaagagat 290
           |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 435 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 486



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                               
Query: 303 aaggtaagag--catgtaacaagcgaggtgcttgtg 336
           ||||||||||  ||||||||||||||||||||||||
Sbjct: 524 aaggtaagagaacatgtaacaagcgaggtgcttgtg 559
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>gb|BT012851.1| Lycopersicon esculentum clone 113930R, mRNA sequence
          Length = 2584

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                  
Query: 377 aggcctttgccatgttgggtgcgctcgcatggcaggcca 415
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aggcctttgccatgttgggtgcgctcgcatggcaggcca 698
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>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
             complete sequence
          Length = 164501

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                     
Query: 377   aggcctttgccatgttgggtgcgctcgcatggcaggccac 416
             |||||||||||||||||||||||||||| |||||||||||
Sbjct: 33476 aggcctttgccatgttgggtgcgctcgcttggcaggccac 33515
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>gb|BT016696.1| Zea mays clone Contig529 mRNA sequence
          Length = 707

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 376 gaggcctttgccatgttgggtgcgctcgcatggcaggcca 415
           ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 595 gaggcctttgccatgatgggtgcgctcgcatggcaggcca 634
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>gb|BT017551.1| Zea mays clone EL01N0424D04.c mRNA sequence
          Length = 1171

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 376 gaggcctttgccatgttgggtgcgctcgcatggcaggcca 415
           ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 527 gaggcctttgccatgatgggtgcgctcgcatggcaggcca 566
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>gb|BT017416.1| Zea mays clone EL01N0401B11.c mRNA sequence
          Length = 1133

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 376 gaggcctttgccatgttgggtgcgctcgcatggcaggcca 415
           ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 526 gaggcctttgccatgatgggtgcgctcgcatggcaggcca 565
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>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
             complete sequence
          Length = 158749

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                     
Query: 377   aggcctttgccatgttgggtgcgctcgcatggcaggccac 416
             |||||||||||||||||||||||||||| |||||||||||
Sbjct: 29767 aggcctttgccatgttgggtgcgctcgcttggcaggccac 29728
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                        
Query: 377      aggcctttgccatgttgggtgcgctcgcatggcaggccac 416
                |||||||||||||||||||||||||||| |||||||||||
Sbjct: 12364064 aggcctttgccatgttgggtgcgctcgcttggcaggccac 12364103
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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0045D08
          Length = 160541

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                      
Query: 377    aggcctttgccatgttgggtgcgctcgcatggcaggccac 416
              |||||||||||||||||||||||||||| |||||||||||
Sbjct: 122713 aggcctttgccatgttgggtgcgctcgcttggcaggccac 122752
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>gb|U84972.1|NTU84972 Nicotiana tabacum GUT15 mRNA, complete cds
          Length = 1670

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||| |||||||||||||||||||||
Sbjct: 598 cctttgccatgatgggtgcgctcgcatggcagg 630
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>gb|U75694.1|STU75694 Solanum tuberosum SRE1b (sre1b) mRNA, complete cds
          Length = 2467

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 378 ggcctttgccatgttgggtgcgctcgcatggcagg 412
           |||||||||||||  ||||||||||||||||||||
Sbjct: 685 ggcctttgccatgccgggtgcgctcgcatggcagg 719
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>gb|U75693.1|STU75693 Solanum tuberosum SRE1a (sre1a) mRNA, complete cds
          Length = 2060

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 378 ggcctttgccatgttgggtgcgctcgcatggcagg 412
           |||||||||||||  ||||||||||||||||||||
Sbjct: 697 ggcctttgccatgacgggtgcgctcgcatggcagg 731
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>gb|U75695.1|STU75695 Solanum tuberosum SRE1c (sre1c) mRNA, complete cds
          Length = 2395

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 378 ggcctttgccatgttgggtgcgctcgcatggcagg 412
           |||||||| ||||  ||||||||||||||||||||
Sbjct: 711 ggcctttgtcatgccgggtgcgctcgcatggcagg 745
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>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 147    ggcggtctcgagctggcgcggcggcg 172
              ||||||||||||| ||||||||||||
Sbjct: 139650 ggcggtctcgagcgggcgcggcggcg 139675
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>ref|NM_127400.2| Arabidopsis thaliana GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15)
           AT2G18440 (GUT15) mRNA, complete cds
          Length = 1190

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 265 cctttgccatgtcaggtgcgcttgcatggcagg 297
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>gb|U80955.3| Caenorhabditis elegans cosmid T04C9, complete sequence
          Length = 34791

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 254   ttcgatgatatttcgataatt 274
             |||||||||||||||||||||
Sbjct: 23712 ttcgatgatatttcgataatt 23692
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>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete
             sequence
          Length = 92861

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 380   cctttgccatgttgggtgcgctcgcatggcagg 412
             ||||||||||||  |||||||| ||||||||||
Sbjct: 18811 cctttgccatgtcaggtgcgcttgcatggcagg 18843
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>dbj|AK220588.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL17-28-H23
          Length = 983

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>emb|BX819089.1|CNS0A9QC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB44ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1314

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 437 cctttgccatgtcaggtgcgcttgcatggcagg 469
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>emb|BX819088.1|CNS0A9PU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB44ZF08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1307

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 437 cctttgccatgtcaggtgcgcttgcatggcagg 469
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>emb|BX842045.1|CNS09YAE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH69ZH05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1180

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 430 cctttgccatgtcaggtgcgcttgcatggcagg 462
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 155     cgagctggcgcggcggcgggc 175
               |||||||||||||||||||||
Sbjct: 1105598 cgagctggcgcggcggcgggc 1105618
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>dbj|AK176672.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-20-O10
          Length = 1382

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK176632.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-17-A12
          Length = 1001

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK176884.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-44-H16
          Length = 1372

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK176857.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-41-F13
          Length = 731

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK176840.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-B17
          Length = 734

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK176476.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-27-I20
          Length = 986

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK176315.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL23-27-P21
          Length = 1000

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK176067.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-80-M09
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK175993.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-69-A04
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK175682.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-19-L10
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK175669.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-16-F01
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>dbj|AK175384.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-82-G23
          Length = 1372

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
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>gb|U84973.1|ATU84973 Arabidopsis thaliana GUT15 mRNA, complete cds
          Length = 1377

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 380 cctttgccatgttgggtgcgctcgcatggcagg 412
           ||||||||||||  |||||||| ||||||||||
Sbjct: 431 cctttgccatgtcaggtgcgcttgcatggcagg 463
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>emb|CR933475.1| Paramecium tetraurelia, Small GTPase ras, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  ataattattagatctaagag 288
            ||||||||||||||||||||
Sbjct: 2073 ataattattagatctaagag 2054
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>ref|XM_759868.1| Theileria parva strain Muguga hypothetical protein (TP02_0395)
           partial mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 ataattattagatctaagag 288
           ||||||||||||||||||||
Sbjct: 235 ataattattagatctaagag 254
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>gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190140

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tctgttgctgatttgatgct 123
             ||||||||||||||||||||
Sbjct: 56500 tctgttgctgatttgatgct 56519
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>emb|AL450344.4| Human DNA sequence from clone RP11-136K14 on chromosome 6 Contains
             three novel genes, the 5' end of a novel gene (contains
             FLJ31738 and KIAA1209) and a CpG island, complete sequence
          Length = 150005

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   aggtgcttgtggtgagggga 345
             ||||||||||||||||||||
Sbjct: 64409 aggtgcttgtggtgagggga 64390
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>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 186215

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tctgttgctgatttgatgct 123
              ||||||||||||||||||||
Sbjct: 169521 tctgttgctgatttgatgct 169540
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>emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in linkage group 10, complete
              sequence
          Length = 156034

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    aacatctagaggcctttgcc 387
              ||||||||||||||||||||
Sbjct: 127019 aacatctagaggcctttgcc 127000


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,843,203
Number of Sequences: 3902068
Number of extensions: 3843203
Number of successful extensions: 73999
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73543
Number of HSP's gapped (non-prelim): 438
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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