ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basdc12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY123422.1| Triticum aestivum putative Rieske Fe-S precursor protein mRNA, complete cds Length = 866 Score = 753 bits (380), Expect = 0.0 Identities = 416/428 (97%) Strand = Plus / Plus Query: 5 gctcgtcccctacggctccttcctcgtcccggccggctccgggagcaacgccggaggggt 64 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 282 gctcgtcccctacggctccttcctcgtccccgccggctccgggagcaacgccggaggggt 341 Query: 65 cgccgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacgg 124 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 342 cgccgccaaggacaagctcggcaacgacatcctcgtcgaggactggctcaagacgcacgg 401 Query: 125 ccccaacgaccgcacgctcgcccaggggctcaagggtgatcctacctaccttgtggtgga 184 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 ccccaacgaccgcacgctggcccaggggctcaagggtgatcctacctaccttgtggtgga 461 Query: 185 gtccgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgt 244 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 462 gtccgacaagacccttgccacctacgggatcaacgccgtgtgcacgcatcttggatgcgt 521 Query: 245 cgtgccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaa 304 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 522 cgtgccgtggaacgccgccgagaacaagttcctctgcccctgccatggatcccagtacaa 581 Query: 305 caaccagggcaaggttgtccgtggacctgcacctctgtcgctggccctcgttcacgccga 364 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 582 caaccagggcaaggttgtccgtgggcctgcacctctgtcgctggccctggttcacgccga 641 Query: 365 cgtcgacgacggcaaggtcgtcttcgtgccatgggtggagaccgacttcaggaccggcga 424 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 642 cgtcgacgacggcaaggtcgtcttcgtgccgtgggtggagaccgacttcaggaccggcga 701 Query: 425 gaacccgt 432 ||||||| Sbjct: 702 caacccgt 709
>emb|AJ222783.1|HVJ222783 Hordeum vulgare mRNA for cytochrome b6/f-complex iron-sulfur like-protein, clone RG115 Length = 275 Score = 537 bits (271), Expect = e-149 Identities = 271/271 (100%) Strand = Plus / Plus Query: 154 tcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacggga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 tcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacggga 64 Query: 214 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagt 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagt 124 Query: 274 tcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctg 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctg 184 Query: 334 cacctctgtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgc 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 cacctctgtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgc 244 Query: 394 catgggtggagaccgacttcaggaccggcga 424 ||||||||||||||||||||||||||||||| Sbjct: 245 catgggtggagaccgacttcaggaccggcga 275
>gb|AY104934.1| Zea mays PCO071754 mRNA sequence Length = 1058 Score = 460 bits (232), Expect = e-126 Identities = 376/424 (88%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccggctccgggagcaacgccggaggggtcg 66 |||||||||||||| ||||| ||||||| ||||||||||||| | || ||| ||| | Sbjct: 373 tcgtcccctacggcgccttcttcgtccctgccggctccgggaacgccggcggcgggacct 432 Query: 67 ccgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggcc 126 ||||||||||||||| |||||||||||| || ||||| |||||||| |||||||| | Sbjct: 433 acgccaaggacaagctgggcaacgacatcacggtggaggagtggctcaacacgcacggtc 492 Query: 127 ccaacgaccgcacgctcgcccaggggctcaagggtgatcctacctaccttgtggtggagt 186 ||||||||||||||||||| ||||||||||||||||| || || ||||| ||||||||| Sbjct: 493 ccaacgaccgcacgctcgcgcaggggctcaagggtgaccccacgtacctggtggtggagc 552 Query: 187 ccgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcg 246 |||||||| || ||||||||||||||||||||||| ||||| || || |||||||||| Sbjct: 553 aggacaagacgctggccacctacgggatcaacgccgtgtgcactcacctcggctgcgtcg 612 Query: 247 tgccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaaca 306 |||| ||||||| ||| |||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 613 tgccgtggaacggcgctgagaacaagttcatctgcccctgccacggatcccagtacaaca 672 Query: 307 accagggcaaggttgtccgtggacctgcacctctgtcgctggccctcgttcacgccgacg 366 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 673 accagggcaaggtggtccgtggaccggcgcctctgtcgctggccctggttcacgccgacg 732 Query: 367 tcgacgacggcaaggtcgtcttcgtgccatgggtggagaccgacttcaggaccggcgaga 426 ||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| Sbjct: 733 tcgacgacggcaaggtcctcttcgtcccgtgggtggagaccgacttcaggaccggcgagg 792 Query: 427 accc 430 |||| Sbjct: 793 accc 796
>gb|BT016255.1| Zea mays clone Contig88 mRNA sequence Length = 998 Score = 456 bits (230), Expect = e-125 Identities = 377/426 (88%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccggctccgggagcaacgccggaggggtcg 66 |||||||||||||| ||||| ||||||| ||||||||||||| | || ||| ||| | Sbjct: 314 tcgtcccctacggcgccttcttcgtccctgccggctccgggaacgccggcggcgggacct 373 Query: 67 ccgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggcc 126 ||||||||||||||| |||||||||||| || |||| |||||||| |||||||| | Sbjct: 374 acgccaaggacaagctgggcaacgacatcacggtggaggcgtggctcaacacgcacggtc 433 Query: 127 ccaacgaccgcacgctcgcccaggggctcaagggtgatcctacctaccttgtggtggagt 186 ||||||| ||||||||||| ||||||||||||||||| || || ||||| ||||||||| Sbjct: 434 ccaacgatcgcacgctcgcgcaggggctcaagggtgaccccacgtacctggtggtggagc 493 Query: 187 ccgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcg 246 |||||||| || ||||||||||||||||||||||| ||||| || || |||||||||| Sbjct: 494 aggacaagacgctggccacctacgggatcaacgccgtgtgcactcacctcggctgcgtcg 553 Query: 247 tgccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaaca 306 |||| ||||||| |||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 554 tgccgtggaacggcgccgagaacaagttcatctgcccatgccacggatcccagtacaaca 613 Query: 307 accagggcaaggttgtccgtggacctgcacctctgtcgctggccctcgttcacgccgacg 366 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 614 accagggcaaggtggtccgtggaccggcgcctctgtcgctggccctggttcacgccgacg 673 Query: 367 tcgacgacggcaaggtcgtcttcgtgccatgggtggagaccgacttcaggaccggcgaga 426 ||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| Sbjct: 674 tcgacgacggcaaggtcctcttcgtcccgtgggtggagaccgacttcaggaccggcgagg 733 Query: 427 acccgt 432 |||||| Sbjct: 734 acccgt 739
>dbj|AK071634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100K03, full insert sequence Length = 1082 Score = 444 bits (224), Expect = e-121 Identities = 377/428 (88%) Strand = Plus / Plus Query: 5 gctcgtcccctacggctccttcctcgtcccggccggctccgggagcaacgccggaggggt 64 |||||||||||||||| ||||| || |||| ||||| ||||||| | || ||| ||| Sbjct: 293 gctcgtcccctacggcgccttcttcatccccgccgggtccgggaacgccggcggcgggca 352 Query: 65 cgccgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacgg 124 | ||||||||||||||||||||||||| | |||| |||||| ||||||||||| ||||| Sbjct: 353 ggtcgccaaggacaagctcggcaacgacgtgctcgccgaggagtggctcaagacacacgg 412 Query: 125 ccccaacgaccgcacgctcgcccaggggctcaagggtgatcctacctaccttgtggtgga 184 ||||||||||||||| ||| ||||||||||||||||||| || || ||||| || ||||| Sbjct: 413 ccccaacgaccgcaccctcacccaggggctcaagggtgacccgacgtacctcgtcgtgga 472 Query: 185 gtccgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgt 244 | |||||||||| || ||||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 473 ggccgacaagacgctggccacgtacgggatcaacgccgtgtgcacgcaccttgggtgcgt 532 Query: 245 cgtgccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaa 304 |||||| |||||||||||||||||||||||| ||||||| ||||| || || |||||||| Sbjct: 533 cgtgccgtggaacgccgccgagaacaagttcatctgcccctgccacggctcgcagtacaa 592 Query: 305 caaccagggcaaggttgtccgtggacctgcacctctgtcgctggccctcgttcacgccga 364 ||||||||||| ||| |||||||||||||| || ||||||||||| | || |||||||| Sbjct: 593 caaccagggcagggtcgtccgtggacctgctcccctgtcgctggcattggtgcacgccga 652 Query: 365 cgtcgacgacggcaaggtcgtcttcgtgccatgggtggagaccgacttcaggaccggcga 424 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 653 cgtcgacgacggcaaggttctcttcgtgccgtgggtggagaccgacttcaggaccggcga 712 Query: 425 gaacccgt 432 ||||||| Sbjct: 713 caacccgt 720
>gb|AF093631.1|AF093631 Oryza sativa Rieske Fe-S precursor protein (RISP) mRNA, complete cds Length = 919 Score = 444 bits (224), Expect = e-121 Identities = 377/428 (88%) Strand = Plus / Plus Query: 5 gctcgtcccctacggctccttcctcgtcccggccggctccgggagcaacgccggaggggt 64 |||||||||||||||| ||||| || |||| ||||| ||||||| | || ||| ||| Sbjct: 281 gctcgtcccctacggcgccttcttcatccccgccgggtccgggaacgccggcggcgggca 340 Query: 65 cgccgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacgg 124 | ||||||||||||||||||||||||| | |||| |||||| ||||||||||| ||||| Sbjct: 341 ggtcgccaaggacaagctcggcaacgacgtgctcgccgaggagtggctcaagacacacgg 400 Query: 125 ccccaacgaccgcacgctcgcccaggggctcaagggtgatcctacctaccttgtggtgga 184 ||||||||||||||| ||| ||||||||||||||||||| || || ||||| || ||||| Sbjct: 401 ccccaacgaccgcaccctcacccaggggctcaagggtgacccgacgtacctcgtcgtgga 460 Query: 185 gtccgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgt 244 | |||||||||| || ||||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 461 ggccgacaagacgctggccacgtacgggatcaacgccgtgtgcacgcaccttgggtgcgt 520 Query: 245 cgtgccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaa 304 |||||| |||||||||||||||||||||||| ||||||| ||||| || || |||||||| Sbjct: 521 cgtgccgtggaacgccgccgagaacaagttcatctgcccctgccacggctcgcagtacaa 580 Query: 305 caaccagggcaaggttgtccgtggacctgcacctctgtcgctggccctcgttcacgccga 364 ||||||||||| ||| |||||||||||||| || ||||||||||| | || |||||||| Sbjct: 581 caaccagggcagggtcgtccgtggacctgctcccctgtcgctggcattggtgcacgccga 640 Query: 365 cgtcgacgacggcaaggtcgtcttcgtgccatgggtggagaccgacttcaggaccggcga 424 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 641 cgtcgacgacggcaaggttctcttcgtgccgtgggtggagaccgacttcaggaccggcga 700 Query: 425 gaacccgt 432 ||||||| Sbjct: 701 caacccgt 708
>gb|AY581830.1| Cynodon dactylon putative Rieske Fe-S precursor protein mRNA, partial cds Length = 511 Score = 305 bits (154), Expect = 6e-80 Identities = 277/318 (87%) Strand = Plus / Plus Query: 113 caagacgcacggccccaacgaccgcacgctcgcccaggggctcaagggtgatcctaccta 172 |||||||||||||||||| |||||||||||| | ||||||||||||||||| || || || Sbjct: 1 caagacgcacggccccaaagaccgcacgctcacgcaggggctcaagggtgaccccacgta 60 Query: 173 ccttgtggtggagtccgacaagaccctcgccacctacgggatcaacgccgtctgcacgca 232 ||| || ||||| |||||||| || ||||||||||| |||||||| |||||||| || Sbjct: 61 cctggtcgtggacaaggacaagacgctggccacctacggcatcaacgcggtctgcaccca 120 Query: 233 tcttggctgcgtcgtgccttggaacgccgccgagaacaagttcctctgcccttgccatgg 292 || || ||||||||||| ||||| || |||||||||||||| | | ||| ||||| || Sbjct: 121 cctgggatgcgtcgtgccgtggaatccccccgagaacaagttcatgtacccatgccacgg 180 Query: 293 atcccagtacaacaaccagggcaaggttgtccgtggacctgcacctctgtcgctggccct 352 ||||||||||||||||||||||||||| ||||||||||| || || |||||||||||| | Sbjct: 181 atcccagtacaacaaccagggcaaggtcgtccgtggaccggcgccactgtcgctggcctt 240 Query: 353 cgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgggtggagaccgactt 412 |||||||||||||||||||||||||||| | | ||||| || ||||||||||||||||| Sbjct: 241 ggttcacgccgacgtcgacgacggcaaggcccttttcgtcccgtgggtggagaccgactt 300 Query: 413 caggaccggcgagaaccc 430 ||||||||||||| |||| Sbjct: 301 caggaccggcgaggaccc 318
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 194 bits (98), Expect = 2e-46 Identities = 158/178 (88%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| || |||||| |||||||||| || ||||| |||||||||| Sbjct: 22132472 agggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacgggatca 22132531 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcc 276 ||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 22132532 acgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccgccgagaacaagttca 22132591 Query: 277 tctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgc 334 ||||||| ||||| || || ||||||||||||||||||| ||| |||||||||||||| Sbjct: 22132592 tctgcccctgccacggctcgcagtacaacaaccagggcagggtcgtccgtggacctgc 22132649 Score = 127 bits (64), Expect = 3e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||||||| Sbjct: 22132295 cgccaaggacaagctcggcaacgacgtgctcgccgaggagtggctcaagacacacggccc 22132354 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 |||||||||||| ||| ||||||||||||||| Sbjct: 22132355 caacgaccgcaccctcacccaggggctcaagg 22132386 Score = 119 bits (60), Expect = 8e-24 Identities = 72/76 (94%) Strand = Plus / Plus Query: 357 cacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgggtggagaccgacttcagg 416 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 22132874 cacgccgacgtcgacgacggcaaggttctcttcgtgccgtgggtggagaccgacttcagg 22132933 Query: 417 accggcgagaacccgt 432 |||||||| ||||||| Sbjct: 22132934 accggcgacaacccgt 22132949 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 5 gctcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||||| ||||| || |||| ||||| Sbjct: 22132135 gctcgtcccctacggcgccttcttcatccccgccgg 22132170
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0058I18 Length = 151453 Score = 194 bits (98), Expect = 2e-46 Identities = 158/178 (88%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| || |||||| |||||||||| || ||||| |||||||||| Sbjct: 86128 agggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacgggatca 86187 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcc 276 ||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 86188 acgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccgccgagaacaagttca 86247 Query: 277 tctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgc 334 ||||||| ||||| || || ||||||||||||||||||| ||| |||||||||||||| Sbjct: 86248 tctgcccctgccacggctcgcagtacaacaaccagggcagggtcgtccgtggacctgc 86305 Score = 127 bits (64), Expect = 3e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||||||| Sbjct: 85951 cgccaaggacaagctcggcaacgacgtgctcgccgaggagtggctcaagacacacggccc 86010 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 |||||||||||| ||| ||||||||||||||| Sbjct: 86011 caacgaccgcaccctcacccaggggctcaagg 86042 Score = 119 bits (60), Expect = 8e-24 Identities = 72/76 (94%) Strand = Plus / Plus Query: 357 cacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgggtggagaccgacttcagg 416 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 86530 cacgccgacgtcgacgacggcaaggttctcttcgtgccgtgggtggagaccgacttcagg 86589 Query: 417 accggcgagaacccgt 432 |||||||| ||||||| Sbjct: 86590 accggcgacaacccgt 86605 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 5 gctcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||||| ||||| || |||| ||||| Sbjct: 85791 gctcgtcccctacggcgccttcttcatccccgccgg 85826
>gb|DQ427777.1| Sorghum propinquum locus HHU30 genomic sequence Length = 742 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 433 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 492 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 493 caacgaccgcacgctggcgcaggggctcaagg 524 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 646 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 705 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 706 acgccgtgtgcactcacctcggctgcgtcgtgcc 739 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 287 tcgtcccctacggcgccttcttcgtccccgccgg 320
>gb|DQ427776.1| Sorghum bicolor voucher PI585454 locus HHU30 genomic sequence Length = 728 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427775.1| Sorghum bicolor voucher PI267539 locus HHU30 genomic sequence Length = 731 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427774.1| Sorghum bicolor voucher PI267408 locus HHU30 genomic sequence Length = 731 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427773.1| Sorghum bicolor voucher PI221607 locus HHU30 genomic sequence Length = 725 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 629 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 688 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 689 acgccgtgtgcactcacctcggctgcgtcgtgcc 722 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427772.1| Sorghum bicolor voucher PI152702 locus HHU30 genomic sequence Length = 731 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427771.1| Sorghum bicolor voucher NSL92371 locus HHU30 genomic sequence Length = 731 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427770.1| Sorghum bicolor voucher NSL87902 locus HHU30 genomic sequence Length = 728 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427769.1| Sorghum bicolor voucher NSL87666 locus HHU30 genomic sequence Length = 733 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 430 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 489 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 490 caacgaccgcacgctggcgcaggggctcaagg 521 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 637 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 696 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 697 acgccgtgtgcactcacctcggctgcgtcgtgcc 730 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427768.1| Sorghum bicolor voucher NSL77217 locus HHU30 genomic sequence Length = 731 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427767.1| Sorghum bicolor voucher NSL77034 locus HHU30 genomic sequence Length = 723 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 277 tcgtcccctacggcgccttcttcgtccccgccgg 310
>gb|DQ427766.1| Sorghum bicolor voucher NSL56174 locus HHU30 genomic sequence Length = 723 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 277 tcgtcccctacggcgccttcttcgtccccgccgg 310
>gb|DQ427765.1| Sorghum bicolor voucher NSL56003 locus HHU30 genomic sequence Length = 723 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 277 tcgtcccctacggcgccttcttcgtccccgccgg 310
>gb|DQ427764.1| Sorghum bicolor voucher NSL55243 locus HHU30 genomic sequence Length = 723 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 277 tcgtcccctacggcgccttcttcgtccccgccgg 310
>gb|DQ427763.1| Sorghum bicolor voucher NSL51365 locus HHU30 genomic sequence Length = 723 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 277 tcgtcccctacggcgccttcttcgtccccgccgg 310
>gb|DQ427762.1| Sorghum bicolor voucher NSL51030 locus HHU30 genomic sequence Length = 728 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427761.1| Sorghum bicolor voucher NSL50875 locus HHU30 genomic sequence Length = 725 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 629 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 688 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 689 acgccgtgtgcactcacctcggctgcgtcgtgcc 722 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ427760.1| Sorghum bicolor voucher BTx623 locus HHU30 genomic sequence Length = 731 Score = 103 bits (52), Expect = 5e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 68 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 127 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 128 caacgaccgcacgctcgcccaggggctcaagg 159 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgcc 250 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 tcgtcccctacggctccttcctcgtcccggccgg 40 |||||||||||||| ||||| ||||||| ||||| Sbjct: 279 tcgtcccctacggcgccttcttcgtccccgccgg 312
>gb|DQ122916.1| Chlamydomonas incerta chloroplast cytochrome B6/F complex rieske iron-sulfur protein (PetC) mRNA, partial cds; nuclear gene for chloroplast product Length = 1178 Score = 89.7 bits (45), Expect = 7e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 216 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 275 |||||||| ||||| || || |||||||||||||||||| || ||||||||||||||| Sbjct: 307 aacgccgtgtgcactcacctgggctgcgtcgtgccttgggtggcggccgagaacaagttc 366 Query: 276 ctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgca 335 ||||||||||| || || ||||||||| |||||||||| |||||||| || || Sbjct: 367 aagtgcccttgccacggctctcagtacaacgctgagggcaaggtggtccgtggccccgct 426 Query: 336 cctctgtcgctggccct 352 || |||||||||||||| Sbjct: 427 cccctgtcgctggccct 443
>dbj|D32003.1| Chlamydomonas reinhardtii mRNA for chloroplast Rieske Fe-S precursor protein, complete cds Length = 1436 Score = 89.7 bits (45), Expect = 7e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 216 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 275 |||||||| ||||| || || |||||||||||||||||| || ||||||||||||||| Sbjct: 440 aacgccgtgtgcactcacctgggctgcgtcgtgccttgggtggcggccgagaacaagttc 499 Query: 276 ctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgca 335 ||||||||||| || || ||||||||| |||||||||| |||||||| || || Sbjct: 500 aagtgcccttgccacggctctcagtacaacgctgagggcaaggtggtccgtggccccgct 559 Query: 336 cctctgtcgctggccct 352 || |||||||||||||| Sbjct: 560 cccctgtcgctggccct 576
>gb|DQ384526.1| Panax ginseng clone PG6L-3 photosynthetic electron transfer-like protein mRNA, complete cds Length = 770 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 204 acctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgcc 263 ||||| || ||||| || || |||||||||||||| || || ||||| ||||| || Sbjct: 389 acctatggtatcaatgcagtgtgcacgcatcttggttgtgttgtgccatggaataaagca 448 Query: 264 gagaacaagttcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtc 323 |||||||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 449 gagaacaagttcatgtgcccatgccatggatctcagtacaacaaccaaggcaaggttgtt 508 Query: 324 cgtggacctgcacctctgtc 343 | || ||||| |||||||| Sbjct: 509 agaggccctgctcctctgtc 528
>ref|NM_193963.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 705 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgggt 400 ||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 96 gtcgctggcattggttcacgccgacgtcgacgacggcaaggttctcttcgtgccgtgggt 155 Query: 401 ggaga 405 ||||| Sbjct: 156 ggaga 160
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgggt 400 ||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 14242598 gtcgctggcattggttcacgccgacgtcgacgacggcaaggttctcttcgtgccgtgggt 14242657 Query: 401 ggaga 405 ||||| Sbjct: 14242658 ggaga 14242662
>gb|AY826845.1| Pavlova lutheri clone PLCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 640 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 214 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagt 273 ||||||| ||||||||||| ||||||||||||||||| ||||||||||| || | |||| Sbjct: 222 tcaacgcggtctgcacgcaccttggctgcgtcgtgccgtggaacgccgcgcagcagaagt 281 Query: 274 tcctctgcccttgccatggatcccagtac 302 || ||||||| ||||| || || |||||| Sbjct: 282 tcatctgcccctgccacggctcgcagtac 310
>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458A05 Length = 120593 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgggt 400 ||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 38288 gtcgctggcattggttcacgccgacgtcgacgacggcaaggttctcttcgtgccgtgggt 38347 Query: 401 ggaga 405 ||||| Sbjct: 38348 ggaga 38352
>gb|AY300039.1| Solanum tuberosum putative Rieske Fe-S protein precursor (FeS) mRNA, complete cds; nuclear gene for chloroplast product Length = 693 Score = 79.8 bits (40), Expect = 7e-12 Identities = 124/152 (81%) Strand = Plus / Plus Query: 156 aagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatc 215 ||||| |||||||| |||||||| |||||| ||| || ||||| ||||| || ||| Sbjct: 406 aagggagatcctacttaccttgttgtggagaacgatggaacactcgcgacctatggtatc 465 Query: 216 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 275 ||||| || ||||| || ||||| || |||||||| ||||| | || |||||||||||| Sbjct: 466 aacgctgtgtgcactcaccttggttgtgtcgtgccgtggaatactgctgagaacaagttc 525 Query: 276 ctctgcccttgccatggatcccagtacaacaa 307 | ||||||||||||||||| || |||||||| Sbjct: 526 atttgcccttgccatggatctcaatacaacaa 557
>gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21H13, complete sequence Length = 101563 Score = 79.8 bits (40), Expect = 7e-12 Identities = 121/148 (81%) Strand = Plus / Plus Query: 157 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 216 |||| ||||| || ||||| || |||||| ||||||||| || || || ||||| || | Sbjct: 101064 agggagatccaacttacctagttgtggagaacgacaagacactagcgacatacggtataa 101123 Query: 217 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcc 276 |||| || ||||| |||||||| || || ||||| |||||| || ||||||||||||| Sbjct: 101124 acgcagtatgcacacatcttggatgtgttgtgccatggaacaaagctgagaacaagttcc 101183 Query: 277 tctgcccttgccatggatcccagtacaa 304 | || ||||||||||||||||| ||||| Sbjct: 101184 tatgtccttgccatggatcccaatacaa 101211
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 77.8 bits (39), Expect = 3e-11 Identities = 83/98 (84%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgg-- 398 ||||||||| | |||||||||||||||||||||| |||||| |||||||||| ||| Sbjct: 53148 gtcgctggcattggttcacgccgacgtcgacgacgacaaggttctcttcgtgccgtgggt 53089 Query: 399 ----gtggagaccgacttcaggaccggcgagaacccgt 432 |||||||||||||||||||| ||||| ||||||| Sbjct: 53088 gtgagtggagaccgacttcaggactggcgacaacccgt 53051
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 77.8 bits (39), Expect = 3e-11 Identities = 83/98 (84%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgg-- 398 ||||||||| | |||||||||||||||||||||| |||||| |||||||||| ||| Sbjct: 18961224 gtcgctggcattggttcacgccgacgtcgacgacgacaaggttctcttcgtgccgtgggt 18961165 Query: 399 ----gtggagaccgacttcaggaccggcgagaacccgt 432 |||||||||||||||||||| ||||| ||||||| Sbjct: 18961164 gtgagtggagaccgacttcaggactggcgacaacccgt 18961127
>gb|AF037456.1|AF037456 Fritillaria agrestis cytochrome B6-F complex iron-sulfur subunit precursor (petC) mRNA, complete cds Length = 881 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 267 aacaagttcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgt 326 ||||||||||||||||| ||||| ||||| || |||||||| || || ||||||||| | Sbjct: 523 aacaagttcctctgcccctgccacggatcgcaatacaacaatcaagggaaggttgtcagg 582 Query: 327 ggacctgcacctctgtcgctggc 349 ||||||||||| |||||||||| Sbjct: 583 ggacctgcaccgttgtcgctggc 605
>ref|NM_116566.3| Arabidopsis thaliana PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C) AT4G03280 (PETC) transcript variant AT4G03280.1 mRNA, complete cds Length = 963 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 561 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 620 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 621 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 678
>ref|NM_178964.1| Arabidopsis thaliana PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C) AT4G03280 (PETC) transcript variant AT4G03280.2 mRNA, complete cds Length = 1062 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 660 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 719 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 720 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 777
>gb|AC005275.1| Arabidopsis thaliana BAC F4C21 from chromosome IV, top arm, near 17 cM, complete sequence Length = 136335 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 74152 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 74211 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 74212 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 74269
>emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 8 Length = 195429 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 92524 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 92583 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 92584 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 92641
>emb|AJ292972.1|ATH292972 Arabidopsis thaliana petC gene for Rieske FeS protein, exons 1-5 Length = 2145 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 1800 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 1859 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 1860 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 1917
>emb|AJ243702.1|ATH243702 Arabidopsis thaliana mRNA for rieske iron-sulfur protein precursor (petC gene) Length = 957 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 537 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 596 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 597 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 654
>gb|AY093726.1| Arabidopsis thaliana AT4g03280/F4C21_21 mRNA, complete cds Length = 633 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 375 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 434 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 435 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 492
>gb|AF410296.1|AF410296 Arabidopsis thaliana AT4g03280/F4C21_21 mRNA, complete cds Length = 1061 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 663 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 722 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 723 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 780
>gb|AF370566.1|AF370566 Arabidopsis thaliana putative component of cytochrome B6-F complex (F4C21.21) mRNA, complete cds Length = 732 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 432 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 491 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 492 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 549
>emb|BX827560.1|CNS0A2RQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1358 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 1016 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 1075 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 1076 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 1133
>emb|AJ784852.1| Cyanophora paradoxa mRNA for Rieske iron-sulphur protein (petC-1 gene) Length = 864 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 214 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagt 273 |||||||||||||||| || ||||| |||||||| || |||||||| | |||||||||| Sbjct: 527 tcaacgccgtctgcactcaccttgggtgcgtcgtcccgtggaacgcgtcggagaacaagt 586 Query: 274 tcctctgcccttgccatggatcccagtac 302 || | ||||| ||||| || ||||||||| Sbjct: 587 tcatgtgcccgtgccacggctcccagtac 615
>dbj|AB025003.1| Cicer arietinum mRNA for plastoquinol-plastocyanin reductase, partial cds Length = 479 Score = 73.8 bits (37), Expect = 4e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 156 aagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatc 215 ||||| |||||||||||||||||||||||| |||| || || || || || ||||| Sbjct: 213 aagggggatcctacctaccttgtggtggagaaagacagaacacttgcaacatatgggatt 272 Query: 216 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 275 || || || ||||| || || || || |||||||| | ||| |||||||||||||||| Sbjct: 273 aatgcagtatgcactcacctcgggtgtgtcgtgccgtttaacaccgccgagaacaagttt 332 Query: 276 ctctgcccttgccatggatcccagtacaa 304 ||||||| ||||||||||| |||||||| Sbjct: 333 atctgcccctgccatggatctcagtacaa 361
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgggt 400 ||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||| | Sbjct: 64261 gtcgctggcattggttcacgccgacgtcgacgacggcaaggttatcttcgtgccgtggat 64202 Query: 401 gga 403 ||| Sbjct: 64201 gga 64199
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgggt 400 ||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||| | Sbjct: 16113091 gtcgctggcattggttcacgccgacgtcgacgacggcaaggttatcttcgtgccgtggat 16113032 Query: 401 gga 403 ||| Sbjct: 16113031 gga 16113029
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 6e-09 Identities = 82/98 (83%), Gaps = 6/98 (6%) Strand = Plus / Plus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgg-- 398 ||||||||| | |||||||||||||||||||||| |||||| |||||||||| ||| Sbjct: 8732162 gtcgctggcattggttcacgccgacgtcgacgacgacaaggttctcttcgtgccgtgggt 8732221 Query: 399 ----gtggagaccgacttcaggaccggcgagaacccgt 432 |||||||| ||||||||||| ||||| ||||||| Sbjct: 8732222 gtgagtggagactgacttcaggactggcgacaacccgt 8732259
>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463G12 Length = 145403 Score = 69.9 bits (35), Expect = 6e-09 Identities = 82/98 (83%), Gaps = 6/98 (6%) Strand = Plus / Plus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgg-- 398 ||||||||| | |||||||||||||||||||||| |||||| |||||||||| ||| Sbjct: 139209 gtcgctggcattggttcacgccgacgtcgacgacgacaaggttctcttcgtgccgtgggt 139268 Query: 399 ----gtggagaccgacttcaggaccggcgagaacccgt 432 |||||||| ||||||||||| ||||| ||||||| Sbjct: 139269 gtgagtggagactgacttcaggactggcgacaacccgt 139306
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 69.9 bits (35), Expect = 6e-09 Identities = 82/98 (83%), Gaps = 6/98 (6%) Strand = Plus / Plus Query: 341 gtcgctggccctcgttcacgccgacgtcgacgacggcaaggtcgtcttcgtgccatgg-- 398 ||||||||| | |||||||||||||||||||||| |||||| |||||||||| ||| Sbjct: 31241 gtcgctggcattggttcacgccgacgtcgacgacgacaaggttctcttcgtgccgtgggt 31300 Query: 399 ----gtggagaccgacttcaggaccggcgagaacccgt 432 |||||||| ||||||||||| ||||| ||||||| Sbjct: 31301 gtgagtggagactgacttcaggactggcgacaacccgt 31338
>dbj|AU066527.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl inducible, complete cds, clone:NaEX96-104 Length = 578 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 264 gagaacaagttcctctgcccttgccatggatcccagtacaacaaccagggcaaggt 319 |||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 419 gagaacaagttcaagtgcccctgccacggatcgcagtacaacaaccagggcaaggt 474
>emb|BX826362.1|CNS0A4FZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 714 Score = 60.0 bits (30), Expect = 6e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 561 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 620 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||| ||||||| | || ||||||||||||||||| |||||| Sbjct: 621 gccatggaacaaagctgagtacaagtttccatgtccttgccatggatcccaatacaac 678
>emb|X63605.1|PSPETC P.sativum petC mRNA for chloroplast Rieske FeS protein Length = 880 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 264 gagaacaagttcctctgcccttgccatggatcccagtacaa 304 |||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 551 gagaacaagttcatctgcccctgccatggatctcagtacaa 591 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 156 aagggtgatcctacctaccttgtggt 181 |||||||||||||||||||||||||| Sbjct: 443 aagggtgatcctacctaccttgtggt 468
>gb|AY826843.1| Heterocapsa triquetra clone HTCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 531 Score = 54.0 bits (27), Expect = 4e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 213 atcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaag 272 |||||||| |||||||| || || |||||||||||||| |||||| || |||| Sbjct: 170 atcaacgcggtctgcacccacctgggctgcgtcgtgccctggaacaggaacgcgaaccgc 229 Query: 273 ttcctctgcccttgccatggatcccagtacaacaaccagggcaaggt 319 ||| ||||||| ||||| ||||| ||||||||| || |||||||||| Sbjct: 230 ttcatctgcccgtgccacggatcgcagtacaacgacgagggcaaggt 276
>emb|AJ784853.1| Cyanophora paradoxa mRNA for Rieske iron-sulphur protein (petC-2 gene) Length = 874 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 216 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaac 257 |||||||||||||| || |||||||||||||| || |||||| Sbjct: 513 aacgccgtctgcactcaccttggctgcgtcgttccctggaac 554 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 131 cgaccgcacgctcgcccaggggctcaagggtgatcctacctacct 175 ||||||| ||||||||||||| |||||||| ||| | |||||||| Sbjct: 428 cgaccgctcgctcgcccagggcctcaagggcgatgccacctacct 472
>emb|BX826457.1|CNS0A4G1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 532 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 264 gagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 211 gagaacaagtttctatgtccttgccatggatcccaatacaac 252
>emb|BX826302.1|CNS0A381 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 790 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 188 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 247 ||||||||| || || || ||||| |||||||| || || || | |||||| || || || Sbjct: 436 cgacaagactctagcgacatacggtatcaacgcagtgtgaactcttcttggatgtgttgt 495 Query: 248 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 305 ||| |||||| || ||||||||||| | || ||||||||||||||||| |||||| Sbjct: 496 gccatggaacaaagctgagaacaagtttttatgtccttgccatggatcccaatacaac 553
>emb|X06244.1|SORFES Spinach mRNA for Rieske FeS-precursor protein Length = 1024 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 222 gtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcctctgc 281 |||||||| |||||||| || || ||||| | || || || |||||||| ||| | || Sbjct: 562 gtctgcacacatcttggatgtgtggtgccatttaatgctgctgagaacaaattcatttgt 621 Query: 282 ccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgcacctctg 341 || |||||||||||||| ||||| ||||| |||| ||||| || || ||||||||| || Sbjct: 622 ccatgccatggatcccaatacaataaccaaggcagagttgttcgaggccctgcacctttg 681 Query: 342 tc 343 || Sbjct: 682 tc 683
>gb|AF110783.1|AF110783 Volvox carteri f. nagariensis clone G9 rieske iron-sulfur protein precursor (petC) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1159 Score = 50.1 bits (25), Expect = 0.006 Identities = 109/137 (79%) Strand = Plus / Plus Query: 216 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 275 |||||||| ||||| || | ||||| ||||| |||||| || ||||||||||||||| Sbjct: 417 aacgccgtgtgcacccacttgggctgtgtcgttccttgggtggcggccgagaacaagttc 476 Query: 276 ctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgca 335 ||||||||||| || || |||||||| |||||||||| |||||||| ||||| Sbjct: 477 aagtgcccttgccacggctctcagtacaatgctgagggcaaggtggtccgtggccctgct 536 Query: 336 cctctgtcgctggccct 352 || ||||| ||||||| Sbjct: 537 ccgctgtctttggccct 553
>gb|AY267656.1| Bigelowiella natans Fe-S subunit of cytochrome c6f complex mRNA, complete cds; nuclear gene for plastid product Length = 1025 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 279 tgcccttgccatggatcccagtac 302 |||||||||||||||||||||||| Sbjct: 630 tgcccttgccatggatcccagtac 653
>emb|X76299.1|CRPETC C.reinhardtii petC gene Length = 1608 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Plus Query: 261 gccgagaacaagttcctctgcccttgccatggatcccagtacaacaaccagggcaaggtt 320 ||||||||||||||| ||||||||||| || || ||||||||| |||||||||| Sbjct: 1104 gccgagaacaagttcaagtgcccttgccacggctctcagtacaacgctgagggcaaggtg 1163 Query: 321 gtccgtgg 328 |||||||| Sbjct: 1164 gtccgtgg 1171 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 216 aacgccgtctgcacgcatcttggctgcgtcgtgccttgg 254 |||||||| ||||| || || |||||||||||||||||| Sbjct: 921 aacgccgtgtgcactcacctgggctgcgtcgtgccttgg 959
>emb|X66009.1|NTRFES1 N.tabacum mRNA for chloroplast Rieske FeS precursor protein 1 Length = 814 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 264 gagaacaagttcctctgcccttgccatggatcccagtacaacaacca 310 ||||||||||| | ||||| ||||||||||| || ||||||||||| Sbjct: 546 gagaacaagtttatttgcccctgccatggatctcaatacaacaacca 592
>emb|X64353.1|NTRFSCBFC N.tabacum mRNA for Rieske Fe/S protein of cytochrome b6/f complex Length = 833 Score = 46.1 bits (23), Expect = 0.094 Identities = 41/47 (87%) Strand = Plus / Plus Query: 264 gagaacaagttcctctgcccttgccatggatcccagtacaacaacca 310 ||||||||||| | ||||| ||||||||||| || ||||||||||| Sbjct: 510 gagaacaagtttatttgcccctgccatggatctcaatacaacaacca 556
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 46.1 bits (23), Expect = 0.094 Identities = 44/51 (86%) Strand = Plus / Plus Query: 207 tacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaac 257 ||||| |||||||| ||||||| || || |||||||| |||||||||||| Sbjct: 12372 tacggaatcaacgcgatctgcacccacctcggctgcgtggtgccttggaac 12422
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 46.1 bits (23), Expect = 0.094 Identities = 68/83 (81%) Strand = Plus / Plus Query: 207 tacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgag 266 ||||| || |||||| ||||||| || || |||||||| ||||| |||||| || || Sbjct: 17466 tacggcattaacgccatctgcacccacctgggctgcgtggtgccctggaacagcggcgcc 17525 Query: 267 aacaagttcctctgcccttgcca 289 ||||||||| | ||||||||||| Sbjct: 17526 aacaagttcatgtgcccttgcca 17548
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 365 cgtcgacgacggcaaggtcgtc 386 |||||||||||||||||||||| Sbjct: 1061203 cgtcgacgacggcaaggtcgtc 1061182
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 44.1 bits (22), Expect = 0.37 Identities = 46/54 (85%) Strand = Plus / Plus Query: 206 ctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgc 259 |||||| |||||||| || ||||| || | |||||||| |||||||||||||| Sbjct: 367618 ctacggcatcaacgcagtttgcacccacttgggctgcgtggtgccttggaacgc 367671
>gb|AY826844.1| Isochrysis galbana clone ISCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 1010 Score = 44.1 bits (22), Expect = 0.37 Identities = 91/114 (79%) Strand = Plus / Plus Query: 189 gacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtg 248 ||||||||||||| | ||||| |||||||| || ||||| || || ||||||||||| Sbjct: 408 gacaagaccctcgagaactacgccatcaacgctgtttgcacccacctcggctgcgtcgtc 467 Query: 249 ccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtac 302 || |||||| |||| || ||||| | ||||||| ||||| || || |||||| Sbjct: 468 ccatggaaccgcgcccagctcaagtacatctgcccgtgccacggctcgcagtac 521
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 371 cgacggcaaggtcgtcttcgtg 392 |||||||||||||||||||||| Sbjct: 3591653 cgacggcaaggtcgtcttcgtg 3591632
>gb|AY487229.1| Mycobacterium fortuitum PgaE gene, partial cds; putative transcription regulator, hypothetical protein, Erm(39), 3355, and FolD genes, complete cds; and 3359 gene, partial cds Length = 4803 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 356 tcacgccgacgtcgacgacggc 377 |||||||||||||||||||||| Sbjct: 3336 tcacgccgacgtcgacgacggc 3357
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 44.1 bits (22), Expect = 0.37 Identities = 46/54 (85%) Strand = Plus / Minus Query: 206 ctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgc 259 |||||| |||||||| || ||||| || | |||||||| |||||||||||||| Sbjct: 1253187 ctacggcatcaacgcagtttgcacccacttgggctgcgtggtgccttggaacgc 1253134
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 371 cgacggcaaggtcgtcttcgtg 392 |||||||||||||||||||||| Sbjct: 46152 cgacggcaaggtcgtcttcgtg 46173
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence Length = 214621 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tcgccgccaaggacaagctcggcaa 88 ||||||||||||||| ||||||||| Sbjct: 148155 tcgccgccaaggacacgctcggcaa 148179
>ref|NM_135169.2| Drosophila melanogaster Pez CG9493-RA (Pez), mRNA Length = 4527 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tcgccgccaaggacaagctcggcaa 88 ||||||||||||||| ||||||||| Sbjct: 1040 tcgccgccaaggacacgctcggcaa 1064
>gb|AF217284.1|AF217284 Drosophila melanogaster protein tyrosine phosphatase Pez (Pez) mRNA, complete cds Length = 4433 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tcgccgccaaggacaagctcggcaa 88 ||||||||||||||| ||||||||| Sbjct: 931 tcgccgccaaggacacgctcggcaa 955
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete sequence Length = 280095 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tcgccgccaaggacaagctcggcaa 88 ||||||||||||||| ||||||||| Sbjct: 119717 tcgccgccaaggacacgctcggcaa 119693
>gb|AC005285.1|AC005285 Drosophila melanogaster DNA sequence (P1s DS00121 (D128), DS05470 (D270), and DS00108 (D120)), complete sequence Length = 209071 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tcgccgccaaggacaagctcggcaa 88 ||||||||||||||| ||||||||| Sbjct: 133071 tcgccgccaaggacacgctcggcaa 133047
>ref|NM_018094.2| Homo sapiens G1 to S phase transition 2 (GSPT2), mRNA Length = 2503 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcccggccggctccgggagcaacg 54 |||||||||||||||| ||||||| Sbjct: 441 tcccggccggctccggcagcaacg 464
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cgccgccaaggacaagctcg 84 |||||||||||||||||||| Sbjct: 1291073 cgccgccaaggacaagctcg 1291092
>ref|XM_659574.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7062.2), mRNA Length = 1668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 cgacggcaaggtcgtcttcg 390 |||||||||||||||||||| Sbjct: 957 cgacggcaaggtcgtcttcg 976
>ref|XM_754954.1| Ustilago maydis 521 hypothetical protein (UM03900.1) partial mRNA Length = 3015 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 caagttcctctgcccttgcc 288 |||||||||||||||||||| Sbjct: 1628 caagttcctctgcccttgcc 1647
>gb|AC125332.3| Mus musculus BAC clone RP23-113I20 from 3, complete sequence Length = 220068 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gttcctctgcccttgccatg 291 |||||||||||||||||||| Sbjct: 148730 gttcctctgcccttgccatg 148711
>gb|AC121928.2| Mus musculus BAC clone RP24-204F1 from 3, complete sequence Length = 178387 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gttcctctgcccttgccatg 291 |||||||||||||||||||| Sbjct: 151770 gttcctctgcccttgccatg 151789
>emb|AL929101.4| Human DNA sequence from clone RP11-22B10 on chromosome X Contains the GSPT2 gene for G1 to S phase transition 2, a pseudogene similar to part of p30 (nuclear protein p30), a zinc finger protein pseudogene, the 5' end of a variant of the MAGED1 gene for melanoma antigen, family D, 1 and two CpG islands, complete sequence Length = 157110 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcccggccggctccgggagcaacg 54 |||||||||||||||| ||||||| Sbjct: 40213 tcccggccggctccggcagcaacg 40236
>emb|AL662824.9| Human DNA sequence from clone XXbac-22I16 on chromosome 6 contains the HLA-DPA1 gene for major histocompatibility complex, class II, DP alpha 1, the HLA-DPB1 gene for major histocompatibility complex, class II, DP beta 1, a ribosomal protein L32 (RPL32) pseudogene, the HLA-DPA2 pseudogene for major histocompatibility complex, class II, DP alpha 2, a pseudogene similar to part of collagens, a novel protein similar to major histocompatibility complex, class II, DP beta 2 (pseudogene), a major histocompatibility complex, class II, DP beta 1 pseudogene, two putative novel transcripts, the COL11A2 gene for collagen, type XI, alpha 2, the RXRB gene for retinoid X receptor, beta, the HKE4 gene for HLA-class II region expressed gene KE4, the 5' end of the HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8 and four CpG islands, complete sequence Length = 187964 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 aagttcctctgcccttgcca 289 |||||||||||||||||||| Sbjct: 38027 aagttcctctgcccttgcca 38046
>emb|AL645931.7| Human DNA sequence from clone XXbac-138A21 on chromosome 6 Contains the HLA-DOA, HLA-DPA1 and HLA-DPB1 genes for major histocompatibility complex class II proteins DO alpha, DP alpha 1 and DP beta 1, the HLA-DPA2 major histocompatibility complex class II DP alpha 2 pseudogene, ribosomal protein L32 pseudogene RPL32P1, a pseudogene similar to part of collagens, the 5' end of an HLA class II histocompatibility antigen D or S beta pseudogene, the 5' end of a novel protein similar to major histocompatibility complex class II DP beta 1 precursor and a CpG island, complete sequence Length = 124899 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 aagttcctctgcccttgcca 289 |||||||||||||||||||| Sbjct: 63737 aagttcctctgcccttgcca 63756
>ref|XM_783177.1| PREDICTED: Strongylocentrotus purpuratus similar to tripartite motif protein TRIM2 (LOC583257), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gacatcctcgtcgaggattg 109 |||||||||||||||||||| Sbjct: 757 gacatcctcgtcgaggattg 776
>gb|BC036077.1| Homo sapiens G1 to S phase transition 2, mRNA (cDNA clone MGC:33729 IMAGE:5313878), complete cds Length = 2513 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcccggccggctccgggagcaacg 54 |||||||||||||||| ||||||| Sbjct: 441 tcccggccggctccggcagcaacg 464
>emb|AJ251548.1|HSA251548 Homo sapiens mRNA for polypeptide chain release factor 3b (GSPT2 gene) Length = 1887 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcccggccggctccgggagcaacg 54 |||||||||||||||| ||||||| Sbjct: 245 tcccggccggctccggcagcaacg 268
>emb|CR759795.4| Human DNA sequence from clone DAMC-206D4 on chromosome 6, complete sequence Length = 119898 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 aagttcctctgcccttgcca 289 |||||||||||||||||||| Sbjct: 58173 aagttcctctgcccttgcca 58192
>emb|CR861342.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1511 (from clone DKFZp459J1511) Length = 2532 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcccggccggctccgggagcaacg 54 |||||||||||||||| ||||||| Sbjct: 459 tcccggccggctccggcagcaacg 482
>gb|AE005819.1| Caulobacter crescentus CB15 section 145 of 359 of the complete genome Length = 10591 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 aggggtcgccgccaaggacaagct 82 |||||||| ||||||||||||||| Sbjct: 457 aggggtcggcgccaaggacaagct 434
>dbj|AK023155.1| Homo sapiens cDNA FLJ13093 fis, clone NT2RP3002151, highly similar to G1 TO S PHASE TRANSITION PROTEIN 1 HOMOLOG Length = 2492 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcccggccggctccgggagcaacg 54 |||||||||||||||| ||||||| Sbjct: 431 tcccggccggctccggcagcaacg 454
>dbj|AK001303.1| Homo sapiens cDNA FLJ10441 fis, clone NT2RP1000733, highly similar to Human mRNA for GSPT1-TK protein Length = 2481 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tcccggccggctccgggagcaacg 54 |||||||||||||||| ||||||| Sbjct: 425 tcccggccggctccggcagcaacg 448
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 tcggcaacgacatcctcgtcgagg 105 |||||||||||||| ||||||||| Sbjct: 2955467 tcggcaacgacatcatcgtcgagg 2955444
>gb|AF336983.1|AF336983 Vaucheria litorea cytochrome b6f complex Rieske FeS protein mRNA, partial cds; nuclear gene for chloroplast product Length = 222 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 246 gtgccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagta 301 |||||||||||| || || ||||||||| |||| ||||||||||| || ||||| Sbjct: 73 gtgccttggaacaaggctgaaaacaagttcatctgtccttgccatgggtcgcagta 128
>gb|AC012451.8| Homo sapiens BAC clone RP11-414K19 from 2, complete sequence Length = 188121 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 caagttcctctgcccttgcc 288 |||||||||||||||||||| Sbjct: 179452 caagttcctctgcccttgcc 179433
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cgtcgacgacggcaaggtcg 384 |||||||||||||||||||| Sbjct: 2036389 cgtcgacgacggcaaggtcg 2036408
>gb|AE005063.1| Halobacterium sp. NRC-1 section 94 of 170 of the complete genome Length = 11844 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 cacggccccaacgaccgcacgctcgccc 147 |||| |||| |||||||||||||||||| Sbjct: 3212 cacgaccccgacgaccgcacgctcgccc 3239
>gb|AF203698.1|AF203698 Rattus norvegicus T calcium channel alpha1G subunit (Cacna1g) gene, partial cds Length = 4171 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gcccaggggctcaagggtgatcct 167 |||||| ||||||||||||||||| Sbjct: 3845 gcccagaggctcaagggtgatcct 3868
>gb|U04283.1|SAPHSA Streptomyces antibioticus IMRU3720 phenoxazinone synthase (phsA) gene, complete cds Length = 2302 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 acgccgacgtcgacgacggc 377 |||||||||||||||||||| Sbjct: 1238 acgccgacgtcgacgacggc 1257 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,155,571 Number of Sequences: 3902068 Number of extensions: 2155571 Number of successful extensions: 41864 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41064 Number of HSP's gapped (non-prelim): 777 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
