ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdb22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related ... 31 2.7
2E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ET... 30 6.0
3E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ET... 30 6.0

>E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related protein E74A)|
          Length = 873

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +2

Query: 11  APAKATWSSYWNLASGNWIEPNILQNNAASN-RSAWFQIHQVNDSFAIRSVSS 166
           A A A  ++  +L +G ++ PN+ QNNAA++ R+ W +   V D++   S SS
Sbjct: 516 AAAAAAAAAAAHLHTGTFLHPNLYQNNAANSLRNIWNRSVGVPDNYYGNSGSS 568



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>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +2

Query: 11  APAKATWSSYWNLASGNWIEPNILQNNAASN-RSAWFQIHQVNDSF 145
           A A A  ++  +L +G ++ PN+ QNNAA++ R+ W +   V D++
Sbjct: 514 AAAAAAAAAAAHLHTGTFLHPNLYQNNAANSLRNIWNRSVGVPDNY 559



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>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related|
           protein E74A)
          Length = 829

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +2

Query: 11  APAKATWSSYWNLASGNWIEPNILQNNAASN-RSAWFQIHQVNDSF 145
           A A A  ++  +L +G ++ PN+ QNNAA++ R+ W +   V D++
Sbjct: 460 AAAAAAAAAAAHLHTGTFLHPNLYQNNAANSLRNIWNRSVGVPDNY 505


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,601,589
Number of Sequences: 219361
Number of extensions: 927013
Number of successful extensions: 3076
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3076
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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