>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1|
          Length = 602

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = +2

Query: 269 ITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADCYRTGDPLTGKRNYTY 448
           I  +IG G+L+L       GWV+G   L +FA  T+ T+ LL+ C  T   L    +  Y
Sbjct: 218 INVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLDTDPTLISYADLGY 277

>S36A1_HUMAN (Q7Z2H8) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
          Length = 476

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +2

Query: 227 QRRTGTVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 403
           Q  + T +    H++   IG+G+L L  A    G V+GP++L++   +  +  G+L  C
Sbjct: 43  QSNSTTWFQTLIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIVAVHCMGILVKC 101

>S36A1_RAT (Q924A5) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
           (Lysosomal amino acid transporter 1) (LYAAT-1) (Neutral
           amino acid/proton symporter)
          Length = 475

 Score = 36.2 bits (82), Expect = 0.073
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +2

Query: 263 HIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 403
           H++   IG+G+L L  A    G ++GP++L++   +  +  G+L  C
Sbjct: 54  HLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100

>S36A1_MOUSE (Q8K4D3) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
          Length = 475

 Score = 36.2 bits (82), Expect = 0.073
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +2

Query: 263 HIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 403
           H++   IG+G+L L  A    G ++GP++L++   +  +  G+L  C
Sbjct: 54  HLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100

>YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV|
          Length = 615

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 14/45 (31%), Positives = 29/45 (64%)
 Frame = +2

Query: 266 IITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLAD 400
           I   ++G+ +L++ WA  Q G V+G + ++  AAI +YT+ ++ +
Sbjct: 172 IWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIE 216

>AAPQ_RHILV (Q52813) General L-amino acid transport system permease protein|
           aapQ
          Length = 400

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
 Frame = +2

Query: 224 KQRRTG----TVWTASAHIITAVIGSGVLSLAWATAQL----------GWVVGPVTLMLF 361
           +Q  TG    TVWTA A I+   +   V+S    T  +          G VVGP  + LF
Sbjct: 214 RQAATGQPFHTVWTAIALIVGLPLLVFVVSGFPLTFDVPVAGKFNLTGGSVVGPEFMSLF 273

Query: 362 AAITYYTSGLLADCYRTG 415
            A+++YT+  +A+  R G
Sbjct: 274 LALSFYTASFIAEIVRGG 291

>TYRP_SHIFL (P0AAD5) Tyrosine-specific transport protein (Tyrosine permease)|
          Length = 403

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 26/92 (28%), Positives = 42/92 (45%)
 Frame = +2

Query: 224 KQRRTGTVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 403
           K R  G+V+  +       IG+G+L++  A A +G+ V  + L+   A+  YT+ LL + 
Sbjct: 2   KNRTLGSVFIVAG----TTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEV 57

Query: 404 YRTGDPLTGKRNYTYMDAVASYLSRWQVWACG 499
           Y+     TG            YL R+  W  G
Sbjct: 58  YQHVPADTGLGT-----LAKRYLGRYGQWLTG 84

>TYRP_ECOLI (P0AAD4) Tyrosine-specific transport protein (Tyrosine permease)|
          Length = 403

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 26/92 (28%), Positives = 42/92 (45%)
 Frame = +2

Query: 224 KQRRTGTVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 403
           K R  G+V+  +       IG+G+L++  A A +G+ V  + L+   A+  YT+ LL + 
Sbjct: 2   KNRTLGSVFIVAG----TTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEV 57

Query: 404 YRTGDPLTGKRNYTYMDAVASYLSRWQVWACG 499
           Y+     TG            YL R+  W  G
Sbjct: 58  YQHVPADTGLGT-----LAKRYLGRYGQWLTG 84

>STP4_ARATH (Q39228) Sugar transport protein 4 (Hexose transporter 4)|
          Length = 514

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 236 TGTVWTASAHIITAVIGSGVLSLAWATAQLGWVV 337
           TG +  + A++I A+I   V   AW+   LGW+V
Sbjct: 377 TGNIGKSDANLIVALICIYVAGFAWSWGPLGWLV 410

>BOK_BRARE (Q7T381) Bcl-2-related ovarian killer protein homolog|
          Length = 211

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = +2

Query: 269 ITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADCYRTGDPLTGKRNYTY 448
           + AV+    LS+A     +G   G V      AI    +GL  DC R G P+     +T 
Sbjct: 99  VEAVVSDAFLSVATEVIAMGITWGKVV-----AIYAVAAGLAVDCVRLGHPV---MVHTI 150

Query: 449 MDAVASYLSR 478
           +D++  ++ R
Sbjct: 151 VDSLGEFVRR 160


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,391,236
Number of Sequences: 219361
Number of extensions: 953747
Number of successful extensions: 3234
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3232
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)