ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basdb17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017005.1| Zea mays clone EK07D2310A10.c mRNA sequence Length = 1053 Score = 454 bits (229), Expect = e-124 Identities = 343/381 (90%) Strand = Plus / Plus Query: 97 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgccggcgcgctggcca 156 |||||||||| ||| | || |||||||||||||||||||| | || || |||||| Sbjct: 148 ccatgttcaataggatcttcgggaagcccaaggagcaggccgactccaatgctttggcca 207 Query: 157 ctttggacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagaga 216 || ||||||||||||| ||||| ||||||||||||||||||||||| || ||| | |||| Sbjct: 208 ctctggacaagttaaatgagacacttgatatgctggagaagaaagaaaaggtgctggaga 267 Query: 217 aaaaagcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagag 276 |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 268 aaaaagcaaacgctgagcttgagagagccaaggagttctcgaaagcaaagaataaaagag 327 Query: 277 cggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggga 336 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 328 cggctatccaatccttgaagaggaaaaaactttatgagcaacaaattgagcagcttggaa 387 Query: 337 atttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacag 396 |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 388 attttcagttgagaatccatgatcagatgatcatgttagaagcagctaaagctacaacag 447 Query: 397 agactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaa 456 ||||||| ||||||||||| ||||||||| |||||||||||| |||||||||||||||| Sbjct: 448 agactgttgatgcattgagaactggagctgcagctatgaaagcaatgcaaaaagcaacaa 507 Query: 457 atattgatgatgtcgacaaga 477 | ||||||||||||||||||| Sbjct: 508 acattgatgatgtcgacaaga 528
>gb|BT016724.1| Zea mays clone Contig557 mRNA sequence Length = 833 Score = 422 bits (213), Expect = e-115 Identities = 339/381 (88%) Strand = Plus / Plus Query: 97 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgccggcgcgctggcca 156 |||||||||||||| | || |||||||||||||||||||| || | | || |||||| Sbjct: 327 ccatgttcaacaggatcttcgggaagcccaaggagcaggccaactctagtgccttggcca 386 Query: 157 ctttggacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagaga 216 | | ||||||||||| |||||||||||||||||||||||||||||||| ||| | || | Sbjct: 387 cactcgacaagttaaatgagactcttgatatgctggagaagaaagagaaggtgctggaca 446 Query: 217 aaaaagcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagag 276 ||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 447 aaaaagcagccgctgagcttgagagagccaaggagttctccaaagctaagaataaaagag 506 Query: 277 cggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggga 336 ||||||||||||| ||||||||||||||||||||||| || |||||||||||||| || | Sbjct: 507 cggctatccaatccttgaagaggaaaaaactttatgaacaacaaattgagcagctcggaa 566 Query: 337 atttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacag 396 |||| |||||||| || |||||||||||||||||||||||||| ||||||||||| || | Sbjct: 567 attttcagttgagaattcatgatcagatgatcatgttagaagcagctaaagctacaacgg 626 Query: 397 agactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaa 456 ||||||| ||||| ||||| ||||||||| |||||||||||| |||||||||||||||| Sbjct: 627 agactgttgatgcgttgagaactggagctgcagctatgaaagcaatgcaaaaagcaacaa 686 Query: 457 atattgatgatgtcgacaaga 477 | ||||||||||||||||||| Sbjct: 687 acattgatgatgtcgacaaga 707
>ref|XM_506643.1| PREDICTED Oryza sativa (japonica cultivar-group), B1008E06.13 patrial mRNA Length = 1223 Score = 392 bits (198), Expect = e-106 Identities = 327/370 (88%) Strand = Plus / Plus Query: 97 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgccggcgcgctggcca 156 |||||||||||||| | ||||| ||||||||||||||||| ||||| | ||| |||||| Sbjct: 238 ccatgttcaacaggctctttggtaagcccaaggagcaggccaatgctagtgcgttggcca 297 Query: 157 ctttggacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagaga 216 | | || |||||||| ||||| ||||| |||||||||||||| |||||||| ||||||| Sbjct: 298 cgcttgataagttaaatgagacccttgacatgctggagaagaaggagaaagtcttagaga 357 Query: 217 aaaaagcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagag 276 |||| |||| || || || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 358 aaaaggcagccgcagaactggagagggctaaggagttctcaaaagcaaagaataaaagag 417 Query: 277 cggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggga 336 ||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| |||| Sbjct: 418 cggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctaggga 477 Query: 337 atttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacag 396 | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 acttccagttgagaattcatgatcagatgatcatgttagaagctgcaaaagctacgacag 537 Query: 397 agactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaa 456 | || || ||||| ||||||||||||||| |||||||||||| |||||||| || |||| Sbjct: 538 aaaccgttgatgctttgaggactggagctgcagctatgaaagcaatgcaaaaggcgacaa 597 Query: 457 atattgatga 466 |||||||||| Sbjct: 598 atattgatga 607
>dbj|AK065728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036O11, full insert sequence Length = 1223 Score = 392 bits (198), Expect = e-106 Identities = 327/370 (88%) Strand = Plus / Plus Query: 97 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgccggcgcgctggcca 156 |||||||||||||| | ||||| ||||||||||||||||| ||||| | ||| |||||| Sbjct: 238 ccatgttcaacaggctctttggtaagcccaaggagcaggccaatgctagtgcgttggcca 297 Query: 157 ctttggacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagaga 216 | | || |||||||| ||||| ||||| |||||||||||||| |||||||| ||||||| Sbjct: 298 cgcttgataagttaaatgagacccttgacatgctggagaagaaggagaaagtcttagaga 357 Query: 217 aaaaagcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagag 276 |||| |||| || || || |||||||| ||||||||||||||||||||||||||||||| Sbjct: 358 aaaaggcagccgcagaactggagagggctaaggagttctcaaaagcaaagaataaaagag 417 Query: 277 cggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggga 336 ||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| |||| Sbjct: 418 cggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctaggga 477 Query: 337 atttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacag 396 | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 acttccagttgagaattcatgatcagatgatcatgttagaagctgcaaaagctacgacag 537 Query: 397 agactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaa 456 | || || ||||| ||||||||||||||| |||||||||||| |||||||| || |||| Sbjct: 538 aaaccgttgatgctttgaggactggagctgcagctatgaaagcaatgcaaaaggcgacaa 597 Query: 457 atattgatga 466 |||||||||| Sbjct: 598 atattgatga 607
>dbj|AK061983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A12, full insert sequence Length = 918 Score = 343 bits (173), Expect = 3e-91 Identities = 263/293 (89%) Strand = Plus / Plus Query: 174 gagactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgag 233 ||||| ||||| |||||||||||||| |||||||| ||||||||||| |||| || || Sbjct: 3 gagacccttgacatgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaa 62 Query: 234 cttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcattg 293 || |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 63 ctggagagggctaaggagttctcaaaagcaaagaataaaagagcggctatccaatccttg 122 Query: 294 aagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggatc 353 ||||| ||||| |||||||| || |||||||||||||| ||||| ||||||||||| || Sbjct: 123 aagagaaaaaagctttatgaacaacaaattgagcagctagggaacttccagttgagaatt 182 Query: 354 catgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattg 413 ||||||||||||||||||||||||||||| |||||||||||||| || || ||||| ||| Sbjct: 183 catgatcagatgatcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttg 242 Query: 414 aggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatga 466 |||||||||||| |||||||||||| |||||||| || |||||||||||||| Sbjct: 243 aggactggagctgcagctatgaaagcaatgcaaaaggcgacaaatattgatga 295
>gb|AY106783.1| Zea mays PCO103251 mRNA sequence Length = 1172 Score = 167 bits (84), Expect = 4e-38 Identities = 180/212 (84%) Strand = Plus / Plus Query: 258 aaagcaaagaataaaagagcggctatccaatcattgaagaggaaaaaactttatgagcag 317 ||||| |||||||||||||| || || || | ||||||||||||| ||| || ||||| Sbjct: 353 aaagccaagaataaaagagctgcaatacagtgcttgaagaggaaaagactatacgagcaa 412 Query: 318 caaattgagcagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaa 377 || |||||||||||||| ||||||||| | ||||| |||||||||||||| ||| | ||| Sbjct: 413 cagattgagcagcttggaaatttccagcttaggatacatgatcagatgattatgctggaa 472 Query: 378 gctgctaaagctacgacagagactgtggatgcattgaggactggagctaaagctatgaaa 437 || || |||||||| |||||||| |||||||||||||| |||||||| ||| |||||| Sbjct: 473 gcagcaaaagctacaacagagaccgtggatgcattgagaactggagcatcagcaatgaaa 532 Query: 438 gcgatgcaaaaagcaacaaatattgatgatgt 469 || ||||| || ||||||||||||||||||| Sbjct: 533 gctatgcataagtcaacaaatattgatgatgt 564
>dbj|AK070667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056L17, full insert sequence Length = 1366 Score = 153 bits (77), Expect = 6e-34 Identities = 248/305 (81%) Strand = Plus / Plus Query: 173 cgagactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctga 232 |||||||||||| |||||||| |||||||| || || ||| ||| ||||| | ||| Sbjct: 305 cgagactcttgaaatgctggaaaagaaagaaaatttgctagtgaagaaagcgaatcttga 364 Query: 233 gcttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcatt 292 | |||||| ||||||| ||| | ||||| |||||||||||||| || || |||| || Sbjct: 365 ggttgagaaggccaagaccttcactaaagcgaagaataaaagagctgcaatacaatgctt 424 Query: 293 gaagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggat 352 |||||||| | | | |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 425 aaagaggaagagattatatgagcaacagattgagcagcttggtaatttccaattaaggat 484 Query: 353 ccatgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcatt 412 |||||||||||||| ||| | |||| ||| || ||||| ||||||||||| |||||||| Sbjct: 485 acatgatcagatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcatt 544 Query: 413 gaggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcga 472 ||| |||||||| || |||||||| ||||| ||||| ||||||||||| || || || Sbjct: 545 gagaactggagcatcggcgatgaaagcaatgcacaaagcgacaaatattgacgacgttga 604 Query: 473 caaga 477 ||||| Sbjct: 605 caaga 609
>dbj|AK060097.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G05, full insert sequence Length = 1139 Score = 153 bits (77), Expect = 6e-34 Identities = 248/305 (81%) Strand = Plus / Plus Query: 173 cgagactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctga 232 |||||||||||| |||||||| |||||||| || || ||| ||| ||||| | ||| Sbjct: 322 cgagactcttgaaatgctggaaaagaaagaaaatttgctagtgaagaaagcgaatcttga 381 Query: 233 gcttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcatt 292 | |||||| ||||||| ||| | ||||| |||||||||||||| || || |||| || Sbjct: 382 ggttgagaaggccaagaccttcactaaagcgaagaataaaagagctgcaatacaatgctt 441 Query: 293 gaagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggat 352 |||||||| | | | |||||||| || |||||||||||||| |||||||| || ||||| Sbjct: 442 aaagaggaagagattatatgagcaacagattgagcagcttggtaatttccaattaaggat 501 Query: 353 ccatgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcatt 412 |||||||||||||| ||| | |||| ||| || ||||| ||||||||||| |||||||| Sbjct: 502 acatgatcagatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcatt 561 Query: 413 gaggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcga 472 ||| |||||||| || |||||||| ||||| ||||| ||||||||||| || || || Sbjct: 562 gagaactggagcatcggcgatgaaagcaatgcacaaagcgacaaatattgacgacgttga 621 Query: 473 caaga 477 ||||| Sbjct: 622 caaga 626
>ref|NM_127541.2| Arabidopsis thaliana unknown protein AT2G19830 mRNA, complete cds Length = 928 Score = 147 bits (74), Expect = 4e-32 Identities = 170/202 (84%) Strand = Plus / Plus Query: 276 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 335 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 304 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 363 Query: 336 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 395 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 364 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 423 Query: 396 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 455 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 424 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 483 Query: 456 aatattgatgatgtcgacaaga 477 || ||||||||||| ||||||| Sbjct: 484 aacattgatgatgttgacaaga 505
>gb|AY079421.1| Arabidopsis thaliana putative copia retroelement pol polyprotein (At2g19830) mRNA, complete cds Length = 673 Score = 147 bits (74), Expect = 4e-32 Identities = 170/202 (84%) Strand = Plus / Plus Query: 276 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 335 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 175 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 234 Query: 336 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 395 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 235 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 294 Query: 396 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 455 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 295 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 354 Query: 456 aatattgatgatgtcgacaaga 477 || ||||||||||| ||||||| Sbjct: 355 aacattgatgatgttgacaaga 376
>gb|AY045911.1| Arabidopsis thaliana putative copia retroelement pol polyprotein (At2g19830) mRNA, complete cds Length = 946 Score = 147 bits (74), Expect = 4e-32 Identities = 170/202 (84%) Strand = Plus / Plus Query: 276 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 335 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 306 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 365 Query: 336 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 395 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 366 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 425 Query: 396 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 455 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 426 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 485 Query: 456 aatattgatgatgtcgacaaga 477 || ||||||||||| ||||||| Sbjct: 486 aacattgatgatgttgacaaga 507
>emb|BX818948.1|CNS0A9WC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 829 Score = 147 bits (74), Expect = 4e-32 Identities = 170/202 (84%) Strand = Plus / Plus Query: 276 gcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttggg 335 |||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| ||| Sbjct: 208 gcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcggg 267 Query: 336 aatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgaca 395 ||||||||| | | || |||||||| ||||| |||||||||| ||||||||| || ||| Sbjct: 268 aatttccagctccgtattcatgatcaaatgattatgttagaaggtgctaaagcaacaaca 327 Query: 396 gagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaaca 455 |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| Sbjct: 328 gagactgtagatgctttgaggactggagcttctgcaatgaaagctatgcagaaagcaaca 387 Query: 456 aatattgatgatgtcgacaaga 477 || ||||||||||| ||||||| Sbjct: 388 aacattgatgatgttgacaaga 409
>gb|BT012766.1| Lycopersicon esculentum clone 113715R, mRNA sequence Length = 984 Score = 141 bits (71), Expect = 2e-30 Identities = 200/243 (82%) Strand = Plus / Plus Query: 235 ttgagagggccaaggagttctcaaaagcaaagaataaaagagcggctatccaatcattga 294 |||||| |||||| || || ||| ||||||||| |||||||| || || || | |||| Sbjct: 197 ttgagaaggccaaagattttacaagagcaaagaacaaaagagctgcaatacagtgtttga 256 Query: 295 agaggaaaaaactttatgagcagcaaattgagcagcttgggaatttccagttgaggatcc 354 ||||||| | || || || || ||||||||||||||||| ||||||||| | | |||| Sbjct: 257 agaggaagaggctctacgaacaacaaattgagcagcttggcaatttccagcttcgcatcc 316 Query: 355 atgatcagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattga 414 ||||||||||||| ||| |||||| || |||||||| || || ||||| ||||| ||| Sbjct: 317 atgatcagatgataatgctagaaggcgcaaaagctacaactgaaactgttgatgctttgc 376 Query: 415 ggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatattgatgatgtcgaca 474 ||||||||||| || |||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 377 ggactggagcttctgcaatgaaagcaatgcagaaagcaacaaatattgatgatgtagaca 436 Query: 475 aga 477 ||| Sbjct: 437 aga 439
>gb|BT013152.1| Lycopersicon esculentum clone 134156F, mRNA sequence Length = 1035 Score = 131 bits (66), Expect = 2e-27 Identities = 252/314 (80%) Strand = Plus / Plus Query: 162 gacaagttaaacgagactcttgatatgctggagaagaaagagaaagtgttagagaaaaaa 221 ||||||||||||||||||||||| ||||| ||||| || ||||| || ||| ||| || Sbjct: 158 gacaagttaaacgagactcttgagatgcttgagaaaaaggagaaggttttactgaagaag 217 Query: 222 gcaggtgctgagcttgagagggccaaggagttctcaaaagcaaagaataaaagagcggct 281 || | |||||| |||| | || ||||| || | | |||||| || ||||| || || Sbjct: 218 gctgcagctgaggttgaaaaagcaaaggaatttactagagcaaaaaacaaaagggctgca 277 Query: 282 atccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgggaatttc 341 || |||| ||||| ||||||| ||||| ||||||||||| |||||||| || || ||| Sbjct: 278 atacaatgtttgaaaaggaaaaggctttacgagcagcaaatcgagcagctcggaaacttc 337 Query: 342 cagttgaggatccatgatcagatgatcatgttagaagctgctaaagctacgacagagact 401 || ||| | || |||||||||||||| |||||||||| ||| ||||| || || |||||| Sbjct: 338 caattgcgtattcatgatcagatgataatgttagaaggtgcaaaagccacaacggagact 397 Query: 402 gtggatgcattgaggactggagctaaagctatgaaagcgatgcaaaaagcaacaaatatt 461 || ||||| || || |||||||| || |||||||| |||||||| ||||| |||||| Sbjct: 398 gttgatgctttaagaactggagcagctgcaatgaaagctatgcaaaaggcaacgaatatt 457 Query: 462 gatgatgtcgacaa 475 || ||||||||||| Sbjct: 458 gacgatgtcgacaa 471
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 175 agactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagc 234 |||| ||||| |||||||||||||| |||||||| ||||||||||| |||| || || | Sbjct: 5049975 agacccttgacatgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaac 5050034 Query: 235 ttgagagggccaaggagttctcaaaagcaaagaataaaagag 276 | |||||||| ||||||||||||||||||||||||||||||| Sbjct: 5050035 tggagagggctaaggagttctcaaaagcaaagaataaaagag 5050076 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 360 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 419 ||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||||| Sbjct: 5050391 cagatgatcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggact 5050450 Query: 420 ggagctaaagctatgaaagcgatgcaaaa 448 |||||| |||||||||||| |||||||| Sbjct: 5050451 ggagctgcagctatgaaagcaatgcaaaa 5050479 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 275 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 334 ||||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 5050226 agcggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctagg 5050285 Query: 335 gaatttccagttgaggatccatgatcag 362 ||| ||||||||||| || ||||||||| Sbjct: 5050286 gaacttccagttgagaattcatgatcag 5050313 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 97 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgc 142 |||||||||||||| | ||||| ||||||||||||||||| ||||| Sbjct: 5049712 ccatgttcaacaggctctttggtaagcccaaggagcaggccaatgc 5049757
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 175 agactcttgatatgctggagaagaaagagaaagtgttagagaaaaaagcaggtgctgagc 234 |||| ||||| |||||||||||||| |||||||| ||||||||||| |||| || || | Sbjct: 52092 agacccttgacatgctggagaagaaggagaaagtcttagagaaaaaggcagccgcagaac 52151 Query: 235 ttgagagggccaaggagttctcaaaagcaaagaataaaagag 276 | |||||||| ||||||||||||||||||||||||||||||| Sbjct: 52152 tggagagggctaaggagttctcaaaagcaaagaataaaagag 52193 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 360 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 419 ||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||||| Sbjct: 52508 cagatgatcatgttagaagctgcaaaagctacgacagaaaccgttgatgctttgaggact 52567 Query: 420 ggagctaaagctatgaaagcgatgcaaaa 448 |||||| |||||||||||| |||||||| Sbjct: 52568 ggagctgcagctatgaaagcaatgcaaaa 52596 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 275 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 334 ||||||||||||||| |||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 52343 agcggctatccaatccttgaagagaaaaaagctttatgaacaacaaattgagcagctagg 52402 Query: 335 gaatttccagttgaggatccatgatcag 362 ||| ||||||||||| || ||||||||| Sbjct: 52403 gaacttccagttgagaattcatgatcag 52430 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 97 ccatgttcaacaggttatttgggaagcccaaggagcaggctaatgc 142 |||||||||||||| | ||||| ||||||||||||||||| ||||| Sbjct: 51829 ccatgttcaacaggctctttggtaagcccaaggagcaggccaatgc 51874
>ref|NM_119060.3| Arabidopsis thaliana unknown protein AT4G29160 transcript variant AT4G29160.1 mRNA, complete cds Length = 1007 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 327 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 386 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 345 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 404 Query: 387 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 446 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 405 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 464 Query: 447 aaagcaacaaatattgatgatgt 469 ||||||||||||||||||||||| Sbjct: 465 aaagcaacaaatattgatgatgt 487
>ref|NM_202906.1| Arabidopsis thaliana unknown protein AT4G29160 transcript variant AT4G29160.2 mRNA, complete cds Length = 1350 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 327 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 386 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 688 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 747 Query: 387 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 446 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 748 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 807 Query: 447 aaagcaacaaatattgatgatgt 469 ||||||||||||||||||||||| Sbjct: 808 aaagcaacaaatattgatgatgt 830
>gb|AY072490.1| Arabidopsis thaliana putative protein (At4g29160; F19B15.190) mRNA, complete cds Length = 782 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 327 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 386 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 223 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 282 Query: 387 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 446 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 283 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 342 Query: 447 aaagcaacaaatattgatgatgt 469 ||||||||||||||||||||||| Sbjct: 343 aaagcaacaaatattgatgatgt 365
>gb|AY042853.1| Arabidopsis thaliana putative protein (F19B15.190) mRNA, complete cds Length = 942 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 327 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 386 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 328 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 387 Query: 387 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 446 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 388 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 447 Query: 447 aaagcaacaaatattgatgatgt 469 ||||||||||||||||||||||| Sbjct: 448 aaagcaacaaatattgatgatgt 470
>gb|AY088519.1| Arabidopsis thaliana clone 7471 mRNA, complete sequence Length = 956 Score = 109 bits (55), Expect = 8e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 327 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 386 |||||||||||||||||| | | || |||||||| ||||| |||||||||| ||| ||| Sbjct: 320 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagaaggtgcaaaa 379 Query: 387 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 446 || || || || ||||| ||||||||||||| ||||||| || ||||| || ||||| Sbjct: 380 gcaacaaccgaaactgttgatgcattgaggagtggagcttctgcaatgaaggcaatgcag 439 Query: 447 aaagcaacaaatattgatgatgt 469 ||||||||||||||||||||||| Sbjct: 440 aaagcaacaaatattgatgatgt 462
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 360 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 419 |||||||| |||||||||| ||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 64719 cagatgattatgttagaaggtgctaaagcaacaacagagactgtagatgctttgaggact 64778 Query: 420 ggagctaaagctatgaaagcgatgcaaaaagcaac 454 |||||| || |||||||| ||||| |||||||| Sbjct: 64779 ggagcttctgcaatgaaagctatgcagaaagcaac 64813 Score = 44.1 bits (22), Expect = 0.41 Identities = 58/70 (82%) Strand = Plus / Plus Query: 275 agcggctatccaatcattgaagaggaaaaaactttatgagcagcaaattgagcagcttgg 334 ||||||||| |||| ||||| ||||||| | |||||||| ||| |||| ||||| || Sbjct: 64540 agcggctatacaatgtttgaaaaggaaaaggttatatgagcaacaagttgaacagctcgg 64599 Query: 335 gaatttccag 344 |||||||||| Sbjct: 64600 gaatttccag 64609
>emb|BX827870.1|CNS0A30O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH2ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 327 cagcttgggaatttccagttgaggatccatgatcagatgatcatgttagaagctgctaaa 386 |||||||||||||||||| | | || |||||||| ||||| ||||||| || ||| ||| Sbjct: 689 cagcttgggaatttccagctccgtattcatgatcaaatgattatgttagcaggtgcaaaa 748 Query: 387 gctacgacagagactgtggatgcattgaggactggagctaaagctatgaaagcgatgcaa 446 || || || || ||||| ||||||||||| | ||||||| || || || | ||||| Sbjct: 749 gcaacaaccgacactgttgatgcattgagcagtggagcttctgcaatcaaggaaatgcag 808 Query: 447 aaagcaacaaatattgatgatgt 469 ||||||||||||||||||||||| Sbjct: 809 aaagcaacaaatattgatgatgt 831
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 360 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 419 |||||||| |||||||||| ||| ||||| || || || ||||| ||||||||||||| | Sbjct: 109769 cagatgattatgttagaaggtgcaaaagcaacaaccgaaactgttgatgcattgaggagt 109828 Query: 420 ggagctaaagctatgaaagcgatgcaaaaagcaac 454 |||||| || ||||| || ||||| |||||||| Sbjct: 109829 ggagcttctgcaatgaaggcaatgcagaaagcaac 109863
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 360 cagatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggact 419 |||||||| |||||||||| ||| ||||| || || || ||||| ||||||||||||| | Sbjct: 93296 cagatgattatgttagaaggtgcaaaagcaacaaccgaaactgttgatgcattgaggagt 93355 Query: 420 ggagctaaagctatgaaagcgatgcaaaaagcaac 454 |||||| || ||||| || ||||| |||||||| Sbjct: 93356 ggagcttctgcaatgaaggcaatgcagaaagcaac 93390
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 309 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgat 367 |||||||| || |||||||||||||| |||||||| || ||||| ||||||||| |||| Sbjct: 23837717 tatgagcaacagattgagcagcttggtaatttccaattaaggatacatgatcaggtgat 23837775 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 361 agatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactg 420 ||||||| ||| | |||| ||| || ||||| ||||||||||| ||||||||||| |||| Sbjct: 23837865 agatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcattgagaactg 23837924 Query: 421 gagc 424 |||| Sbjct: 23837925 gagc 23837928
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 309 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgat 367 |||||||| || |||||||||||||| |||||||| || ||||| ||||||||| |||| Sbjct: 77382 tatgagcaacagattgagcagcttggtaatttccaattaaggatacatgatcaggtgat 77440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 361 agatgatcatgttagaagctgctaaagctacgacagagactgtggatgcattgaggactg 420 ||||||| ||| | |||| ||| || ||||| ||||||||||| ||||||||||| |||| Sbjct: 77530 agatgataatgctggaaggtgcaaaggctacaacagagactgttgatgcattgagaactg 77589 Query: 421 gagc 424 |||| Sbjct: 77590 gagc 77593
>gb|AF111147.1|AF111147 Ipomoea cordatotriloba granule-bound starch synthase (waxy) gene, partial cds Length = 513 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 311 tgagcagcaaattgagcagcttg 333 ||||||||||||||||||||||| Sbjct: 393 tgagcagcaaattgagcagcttg 415
>gb|AF111145.1|AF111145 Ipomoea lacunosa granule-bound starch synthase (waxy) gene, partial cds Length = 585 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 311 tgagcagcaaattgagcagcttg 333 ||||||||||||||||||||||| Sbjct: 434 tgagcagcaaattgagcagcttg 456
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 ctcttgatatgctggagaagaa 199 |||||||||||||||||||||| Sbjct: 7321231 ctcttgatatgctggagaagaa 7321252 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 agactcttgatatgctggagaagaaagag 203 ||||||| || |||||||||||||||||| Sbjct: 1013090 agactctagaaatgctggagaagaaagag 1013062
>dbj|AK070935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068B07, full insert sequence Length = 967 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 174 gagactcttgatatgctggagaagaaagag 203 |||||||| || |||||||||||||||||| Sbjct: 271 gagactctagaaatgctggagaagaaagag 300
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 ctcttgatatgctggagaagaa 199 |||||||||||||||||||||| Sbjct: 7321110 ctcttgatatgctggagaagaa 7321131 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 agactcttgatatgctggagaagaaagag 203 ||||||| || |||||||||||||||||| Sbjct: 1013090 agactctagaaatgctggagaagaaagag 1013062
>emb|AL732648.3|CNS08C9N Oryza sativa chromosome 12, . BAC OSJNBb0020J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133575 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 ctcttgatatgctggagaagaa 199 |||||||||||||||||||||| Sbjct: 36241 ctcttgatatgctggagaagaa 36262
>gb|AC170188.2| Mus musculus BAC clone RP24-195M20 from chromosome 13, complete sequence Length = 165687 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 45765 aaagagaaagtgttagtgaaaaaag 45741
>gb|BC019183.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:5010155), containing frame-shift errors Length = 2219 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1794 aaagagaaagtgttagtgaaaaaag 1818
>emb|Z82271.1|CEF54E12 Caenorhabditis elegans Cosmid F54E12, complete sequence Length = 13877 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 tggagaagaaagagaaagtgt 210 ||||||||||||||||||||| Sbjct: 173 tggagaagaaagagaaagtgt 153
>gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074L01, complete sequence Length = 115339 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 agactcttgatatgctggagaagaaagag 203 ||||||| || |||||||||||||||||| Sbjct: 79340 agactctagaaatgctggagaagaaagag 79312
>gb|AC131888.1| Homo sapiens chromosome 16 clone RP11-626G3, complete sequence Length = 162957 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 agaaagagaaagtgttagagaaaaa 220 |||||||||||| |||||||||||| Sbjct: 70689 agaaagagaaagagttagagaaaaa 70665
>ref|NM_008634.1| Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA Length = 8818 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1800 aaagagaaagtgttagtgaaaaaag 1824
>dbj|AK143169.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130206H16 product:microtubule-associated protein 1 B, full insert sequence Length = 1759 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1595 aaagagaaagtgttagtgaaaaaag 1619
>dbj|AK157749.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130017F22 product:microtubule-associated protein 1 B, full insert sequence Length = 1849 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1634 aaagagaaagtgttagtgaaaaaag 1658
>gb|AC111220.6| Rattus norvegicus Chr BAC CH230-122K11 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 237466 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 aaaaagcaacaaatattgatg 465 ||||||||||||||||||||| Sbjct: 198906 aaaaagcaacaaatattgatg 198926
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 aaaagcaacaaatattgatga 466 ||||||||||||||||||||| Sbjct: 525511 aaaagcaacaaatattgatga 525491
>gb|AC109037.6| Rattus norvegicus 18 BAC CH230-178G23 (Children's Hospital Oakland Research Institute) complete sequence Length = 208650 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 aaaaagcaacaaatattgatg 465 ||||||||||||||||||||| Sbjct: 147112 aaaaagcaacaaatattgatg 147092
>gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence Length = 171058 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 aaaagcaacaaatattgatga 466 ||||||||||||||||||||| Sbjct: 23246 aaaagcaacaaatattgatga 23226
>gb|BC037105.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:5366028), partial cds Length = 2133 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1807 aaagagaaagtgttagtgaaaaaag 1831
>dbj|AK038690.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230055D22 product:microtubule-associated protein 1 B, full insert sequence Length = 1191 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 683 aaagagaaagtgttagtgaaaaaag 707
>gb|BC078457.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:30360897) Length = 2112 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1788 aaagagaaagtgttagtgaaaaaag 1812
>gb|BC052016.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:6404340) Length = 2112 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1783 aaagagaaagtgttagtgaaaaaag 1807
>gb|BC046287.1| Mus musculus microtubule-associated protein 1 B, mRNA (cDNA clone IMAGE:6468810) Length = 2110 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1783 aaagagaaagtgttagtgaaaaaag 1807
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 agactcttgatatgctggagaagaaagag 203 ||||||| || |||||||||||||||||| Sbjct: 1081058 agactctagaaatgctggagaagaaagag 1081030
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 aatctcgactcctccgccgcc 62 ||||||||||||||||||||| Sbjct: 9180712 aatctcgactcctccgccgcc 9180692
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold Length = 1570569 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 aaaagcaacaaatattgatga 466 ||||||||||||||||||||| Sbjct: 552782 aaaagcaacaaatattgatga 552762
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 aatctcgactcctccgccgcc 62 ||||||||||||||||||||| Sbjct: 81094 aatctcgactcctccgccgcc 81074
>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in Acinetobacter baumannii Length = 100001 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gaggtgccaccatgttcaaca 108 ||||||||||||||||||||| Sbjct: 84763 gaggtgccaccatgttcaaca 84783
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 agactcttgatatgctggagaagaaagag 203 ||||||| || |||||||||||||||||| Sbjct: 1078779 agactctagaaatgctggagaagaaagag 1078751
>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 97056 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 agactcttgatatgctggagaagaaagag 203 ||||||| || |||||||||||||||||| Sbjct: 8361 agactctagaaatgctggagaagaaagag 8333
>gb|AC139381.4| Mus musculus BAC clone RP23-171D1 from 13, complete sequence Length = 242105 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 225690 aaagagaaagtgttagtgaaaaaag 225714
>emb|X51396.1|MMMAP1B Mus musculus mRNA for microtubule-associated protein 1B (MAP1B gene) Length = 8818 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 aaagagaaagtgttagagaaaaaag 222 |||||||||||||||| |||||||| Sbjct: 1800 aaagagaaagtgttagtgaaaaaag 1824
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 tctcaaaagcaaagaataaaagag 276 |||||||||||||||| ||||||| Sbjct: 13899 tctcaaaagcaaagaacaaaagag 13876
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 atgaaagcgatgcaaaaagc 451 |||||||||||||||||||| Sbjct: 391070 atgaaagcgatgcaaaaagc 391051
>gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, complete sequence Length = 198404 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 aaaagcaaagaataaaagag 276 |||||||||||||||||||| Sbjct: 163290 aaaagcaaagaataaaagag 163309
>gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosome 7, complete sequence Length = 202580 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tccatgatcagatgatcatg 371 |||||||||||||||||||| Sbjct: 40660 tccatgatcagatgatcatg 40679
>gb|AC102361.13| Mus musculus chromosome 18, clone RP23-37I2, complete sequence Length = 213628 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tcaaaagcaaagaataaaag 274 |||||||||||||||||||| Sbjct: 200193 tcaaaagcaaagaataaaag 200212
>gb|AY465182.1| Nematostella vectensis tropomyosin mRNA, complete cds Length = 1175 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 gctgagcttgagagggccaaggag 251 ||||||||||||| |||||||||| Sbjct: 725 gctgagcttgagaaggccaaggag 748
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence Length = 229312 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tccatgatcagatgatcatg 371 |||||||||||||||||||| Sbjct: 204375 tccatgatcagatgatcatg 204394
>gb|AC138133.26| Medicago truncatula clone mth2-9o2, complete sequence Length = 149166 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tgcaaaaagcaacaaatatt 461 |||||||||||||||||||| Sbjct: 138005 tgcaaaaagcaacaaatatt 138024
>gb|AC126790.38| Medicago truncatula clone mth2-10d14, complete sequence Length = 127447 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tgcaaaaagcaacaaatatt 461 |||||||||||||||||||| Sbjct: 88358 tgcaaaaagcaacaaatatt 88377
>ref|XM_968458.1| PREDICTED: Tribolium castaneum similar to CG2041-PA (LOC662357), mRNA Length = 3336 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 accggacgccacccagccgc 20 |||||||||||||||||||| Sbjct: 3108 accggacgccacccagccgc 3127
>gb|AC163999.3| Mus musculus chromosome 15, clone RP24-387E19, complete sequence Length = 163830 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgatatgctggagaagaaag 201 |||||||||||||||||||| Sbjct: 68600 tgatatgctggagaagaaag 68581
>gb|AY954921.1| Mythimna unipuncta farnesyl diphosphate synthase mRNA, complete cds Length = 1862 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atgctggagaagaaagagaa 205 |||||||||||||||||||| Sbjct: 443 atgctggagaagaaagagaa 462
>dbj|AK001582.1| Homo sapiens cDNA FLJ10720 fis, clone NT2RP3001116 Length = 3591 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aaagagaaagtgttagagaa 217 |||||||||||||||||||| Sbjct: 1666 aaagagaaagtgttagagaa 1647
>gb|AC079464.5| Homo sapiens chromosome 5 clone CTB-12O2, complete sequence Length = 55687 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aaagagaaagtgttagagaa 217 |||||||||||||||||||| Sbjct: 21439 aaagagaaagtgttagagaa 21420
>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence Length = 189722 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ttgatatgctggagaagaaagaga 204 ||||| |||||||||||||||||| Sbjct: 121823 ttgatgtgctggagaagaaagaga 121800
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 attgaagaggaaaaaacttt 309 |||||||||||||||||||| Sbjct: 20461 attgaagaggaaaaaacttt 20480
>gb|AC108521.1| Caenorhabditis briggsae cosmid CB004G08, complete sequence Length = 82505 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aagagaaagtgttagagaaa 218 |||||||||||||||||||| Sbjct: 36202 aagagaaagtgttagagaaa 36221
>gb|AC024288.9| Homo sapiens, clone RP11-23B5, complete sequence Length = 169540 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atgctggagaagaaagagaa 205 |||||||||||||||||||| Sbjct: 1471 atgctggagaagaaagagaa 1490
>gb|AC149502.2| Xenopus tropicalis clone CH216-11H14, complete sequence Length = 196315 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 agaaagtgttagagaaaaaagcag 225 ||||||||||||||||| |||||| Sbjct: 91128 agaaagtgttagagaaagaagcag 91105
>emb|BX649314.6| Zebrafish DNA sequence from clone DKEYP-111A3 in linkage group 23, complete sequence Length = 170403 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 aaaaagcaacaaatattgat 464 |||||||||||||||||||| Sbjct: 117243 aaaaagcaacaaatattgat 117262
>emb|BX820442.1|CNS0A9L1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH34ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 956 Score = 40.1 bits (20), Expect = 6.4 Identities = 92/116 (79%) Strand = Plus / Plus Query: 309 tatgagcagcaaattgagcagcttgggaatttccagttgaggatccatgatcagatgatc 368 |||||||| ||| |||| ||||| |||||| ||||| | | || |||||||| || ||| Sbjct: 246 tatgagcaacaagttgaacagctcgggaatgtccagctccgtattcatgatcaaatcatc 305 Query: 369 atgttagaagctgctaaagctacgacagagactgtggatgcattgaggactggagc 424 | | |||| |||||| || || ||||||| ||| ||||| || ||||||||||| Sbjct: 306 ctctccgaaggtgctaacgcaacaacagagaatgtagatgcgtttaggactggagc 361
>gb|AC092638.2| Homo sapiens BAC clone RP11-363G3 from 2, complete sequence Length = 167941 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 aacaaatattgatgatgtcg 471 |||||||||||||||||||| Sbjct: 128374 aacaaatattgatgatgtcg 128355
>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence Length = 224670 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atgctggagaagaaagagaa 205 |||||||||||||||||||| Sbjct: 171199 atgctggagaagaaagagaa 171218
>gb|AC131338.4| Mus musculus BAC clone RP23-29O10 from 18, complete sequence Length = 203229 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tcaaaagcaaagaataaaag 274 |||||||||||||||||||| Sbjct: 169694 tcaaaagcaaagaataaaag 169675
>emb|BX005280.14| Zebrafish DNA sequence from clone CH211-256J23 in linkage group 18, complete sequence Length = 164570 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 atgcaaaaagcaacaaatattgat 464 ||||||||||||| |||||||||| Sbjct: 147206 atgcaaaaagcaataaatattgat 147183
>gb|AF111141.1|AF111141 Ipomoea gracilis granule-bound starch synthase (waxy) gene, partial cds Length = 593 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 tgagcagcaaattgagcagcttgg 334 ||||||||| |||||||||||||| Sbjct: 438 tgagcagcagattgagcagcttgg 461
>dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2562J17, complete sequences Length = 215225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ggagaagaaagagaaagtgt 210 |||||||||||||||||||| Sbjct: 88655 ggagaagaaagagaaagtgt 88674
>gb|AC132131.4| Mus musculus BAC clone RP23-356D16 from 10, complete sequence Length = 170192 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atgaaagcgatgcaaaaagcaaca 455 ||||||||||||||| |||||||| Sbjct: 85359 atgaaagcgatgcaagaagcaaca 85382
>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gctggagaagaaagagaaag 207 |||||||||||||||||||| Sbjct: 132583 gctggagaagaaagagaaag 132602 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,377,553 Number of Sequences: 3902068 Number of extensions: 5377553 Number of successful extensions: 120222 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 119676 Number of HSP's gapped (non-prelim): 544 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
