ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdb13 |
|---|---|
| Clone Library Name | barley_pub |
>ASNS_TRIVS (O24661) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 64.7 bits (156), Expect = 7e-11 Identities = 32/56 (57%), Positives = 36/56 (64%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDKE + IEKW+LRKAFDDEE+P+LPKHILYRQK Sbjct: 394 RVPFLDKEFVNLAMSIDPEAKMIKPDQGRIEKWILRKAFDDEERPYLPKHILYRQK 449
>ASNS_BRAOL (P49091) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 64.3 bits (155), Expect = 9e-11 Identities = 32/56 (57%), Positives = 36/56 (64%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDKE + IEKWVLR+AFDDEE+P+LPKHILYRQK Sbjct: 395 RVPFLDKEFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQK 450
>ASNS_ASPOF (P31752) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (AS) Length = 589 Score = 64.3 bits (155), Expect = 9e-11 Identities = 33/56 (58%), Positives = 35/56 (62%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDKE + IEKWVLRKAFDDEE P+LPKHILYRQK Sbjct: 394 RVPFLDKEFMDVAMSIDPESKMIKPDLGRIEKWVLRKAFDDEENPYLPKHILYRQK 449
>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 583 Score = 63.2 bits (152), Expect = 2e-10 Identities = 31/56 (55%), Positives = 36/56 (64%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDK+ + IEKWVLR+AFDDEE+P+LPKHILYRQK Sbjct: 394 RVPFLDKDFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQK 449
>ASNS2_LOTJA (P49093) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 585 Score = 62.0 bits (149), Expect = 4e-10 Identities = 32/56 (57%), Positives = 34/56 (60%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDK+ IEKWVLRKAFDDEE P+LPKHILYRQK Sbjct: 394 RVPFLDKKFIDVAMGIDPENKMIKRDEGRIEKWVLRKAFDDEENPYLPKHILYRQK 449
>ASNS1_PEA (P19251) Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 585 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/56 (55%), Positives = 34/56 (60%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDK+ IEKW+LRKAFDDEE P+LPKHILYRQK Sbjct: 395 RVPFLDKDFIKVAMDIDPEFKMIKHDEGRIEKWILRKAFDDEENPYLPKHILYRQK 450
>ASNS_SANAU (O24338) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 524 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/56 (55%), Positives = 35/56 (62%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDKE + IEKW+LR+AFDDEE P+LPKHILYRQK Sbjct: 394 RVPFLDKEFVNVAMSIDPEWKMIKPDIGRIEKWILRRAFDDEENPYLPKHILYRQK 449
>ASNS_MAIZE (P49094) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 59.3 bits (142), Expect = 3e-09 Identities = 30/56 (53%), Positives = 33/56 (58%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDK IEKWV+RKAFDD+E P+LPKHILYRQK Sbjct: 394 RVPFLDKSFISVAMDIDPEWNMIKRDLGRIEKWVMRKAFDDDEHPYLPKHILYRQK 449
>ASNS_ORYSA (Q43011) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 590 Score = 59.3 bits (142), Expect = 3e-09 Identities = 31/56 (55%), Positives = 33/56 (58%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDK IEKWVLR AFDDEE+P+LPKHILYRQK Sbjct: 394 RVPFLDKNFINVAMDIDPEWKMIKRDLGRIEKWVLRNAFDDEEKPYLPKHILYRQK 449
>ASNS1_LOTJA (P49092) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 585 Score = 58.5 bits (140), Expect = 5e-09 Identities = 30/56 (53%), Positives = 35/56 (62%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDKE IEK++LR+AFDDEE+P+LPKHILYRQK Sbjct: 394 RVPFLDKEFINVAMNIDPEYKMIKRDEGRIEKYILRRAFDDEEKPYLPKHILYRQK 449
>ASNS2_PEA (P19252) Asparagine synthetase, root [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 582 Score = 57.0 bits (136), Expect = 1e-08 Identities = 30/56 (53%), Positives = 33/56 (58%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLDK IEK++LRKAFDDEE P+LPKHILYRQK Sbjct: 394 RVPFLDKAFINVAMNIDPENKMIKRDEGRIEKYILRKAFDDEENPYLPKHILYRQK 449
>ASNS2_YEAST (P49090) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 571 Score = 40.4 bits (93), Expect = 0.001 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQ----PFLPKHILYRQK 169 RVPFLDK+ IEK++LRKAFD ++ P+LP+ IL+RQK Sbjct: 418 RVPFLDKDFLQLCMNIDPNEKMIKPKEGRIEKYILRKAFDTTDEPDVKPYLPEEILWRQK 477
>ASNS1_YEAST (P49089) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 571 Score = 40.0 bits (92), Expect = 0.002 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFD----DEEQPFLPKHILYRQK 169 RVPFLD+E IEK++LRKAFD + +P+LP+ IL+RQK Sbjct: 419 RVPFLDREFLQLCMNIDPNEKMIKPKEGRIEKYILRKAFDTTGEPDAKPYLPEEILWRQK 478
>ASNS_SCHPO (P78753) Probable asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 556 Score = 38.1 bits (87), Expect = 0.007 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEE----QPFLPKHILYRQK 169 RVPFLDK+ + A EK++LRKAFD QP+LP+ IL+RQK Sbjct: 407 RVPFLDKDFL--EVALNIDPEEKMYINGRKEKYILRKAFDTTHDSSLQPYLPQDILWRQK 464
>ASNS_CHICK (Q5ZJU3) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 29.6 bits (65), Expect = 2.3 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = +2 Query: 2 RVPFLDKELSMRQ*AXXXXXXXXXXXXXXIEKWVLRKAFDDEEQPFLPKHILYRQK 169 RVPFLD + IEK++LR++F+D LPK IL+R K Sbjct: 416 RVPFLDHRFTSYY---LSLPAELRIPKNGIEKYLLRQSFEDSN--LLPKEILWRPK 466
>SC12_MESMA (Q9GQW3) Alpha-neurotoxin TX12 precursor (BmKalphaTx12)| (Alpha-neurotoxin IT01) (BmKalphaIT01) (BmKalphaIT1) Length = 85 Score = 27.7 bits (60), Expect = 8.9 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -3 Query: 141 RNGCSSSSNAFLRTH-FSILSKIRPDHLPLRINAHC 37 +NG S S +L H F+ K PD++P+R+ C Sbjct: 47 KNGAKSGSCPYLGEHKFACYCKDLPDNVPIRVPGKC 82 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,756,827 Number of Sequences: 219361 Number of extensions: 375940 Number of successful extensions: 1065 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1028 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1044 length of database: 80,573,946 effective HSP length: 32 effective length of database: 73,554,394 effective search space used: 1765305456 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
