Clone Name | basdb13 |
---|---|
Clone Library Name | barley_pub |
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 Score = 307 bits (155), Expect = 6e-81 Identities = 169/171 (98%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 acgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtg 59 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1253 acgtgtgccattcttggacaaggagtttatcaatgaggcaatgagcattgatcctgagtg 1312 Query: 60 gaagatgatccggcctgatcttggaaagaattgagaagtgggttctgaggaaagcatttg 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1313 gaagatgatccggcctgatcttggaa-gaattgagaagtgggttctgaggaaagcatttg 1371 Query: 120 atgacgaggagcaaccattcctgccgaagcacattctgtacaggcagaaag 170 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1372 atgacgaggagcaaccattcctgccgaagcacattctgtacaggcagaaag 1422
>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence Length = 2064 Score = 283 bits (143), Expect = 8e-74 Identities = 166/171 (97%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 acgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtg 59 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1237 acgtgtgccattcttggacaaggagtttatcaatgaggcaatgagcattgatcctgagtg 1296 Query: 60 gaagatgatccggcctgatcttggaaagaattgagaagtgggttctgaggaaagcatttg 119 |||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||||| Sbjct: 1297 gaagatgatccggcctgatcttggaa-gaattgagaaatggatgctgaggaaagcatttg 1355 Query: 120 atgacgaggagcaaccattcctgccgaagcacattctgtacaggcagaaag 170 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 atgacgaggagcaaccattcctgccgaagcacattctgtacaggcagaaag 1406
>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1) mRNA, complete cds Length = 1815 Score = 283 bits (143), Expect = 8e-74 Identities = 166/171 (97%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 acgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtg 59 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1203 acgtgtgccattcttggacaaggagtttatcaatgaggcaatgagcattgatcctgagtg 1262 Query: 60 gaagatgatccggcctgatcttggaaagaattgagaagtgggttctgaggaaagcatttg 119 |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 1263 gaagatgatccggcctgatcttggaa-gaattgagaaatgggtgctgaggaaagcatttg 1321 Query: 120 atgacgaggagcaaccattcctgccgaagcacattctgtacaggcagaaag 170 ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1322 atgacgaggagcaaccattcctgccgaagcatattctgtacaggcagaaag 1372
>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA sequence Length = 2119 Score = 198 bits (100), Expect = 4e-48 Identities = 153/168 (91%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 2 cgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtgg 60 |||||||||||||||||||||||||| ||||||||||| |||||||| ||||| || ||| Sbjct: 1252 cgtgtgccattcttggacaaggagttcatcaatgaggctatgagcatagatcccgaatgg 1311 Query: 61 aagatgatccggcctgatcttggaaagaattgagaagtgggttctgaggaaagcatttga 120 ||||||||||||||||||||||||| |||||||||| ||| | ||||||||||| || || Sbjct: 1312 aagatgatccggcctgatcttggaa-gaattgagaaatggatactgaggaaagcgttcga 1370 Query: 121 tgacgaggagcaaccattcctgccgaagcacattctgtacaggcagaa 168 ||| ||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct: 1371 tgatgaggagcgacccttcctgccgaagcatattctgtacaggcagaa 1418
>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 Score = 182 bits (92), Expect = 2e-43 Identities = 151/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 2 cgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtgg 60 |||||||||||||||||||||||||| ||| ||||||| |||||||| |||||||| ||| Sbjct: 1183 cgtgtgccattcttggacaaggagttcatcgatgaggctatgagcatagatcctgaatgg 1242 Query: 61 aagatgatccggcctgatcttggaaagaattgagaagtgggttctgaggaaagcatttga 120 ||||||||||||||||||||||| ||||||||| || ||| | ||||||||||| || || Sbjct: 1243 aagatgatccggcctgatcttgg-aagaattgaaaaatggatactgaggaaagcgttcga 1301 Query: 121 tgacgaggagcaaccattcctgccgaagcacattctgtacaggcagaa 168 || |||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 1302 cgatgaggagaaaccgttcttgccgaagcacattctgtacaggcagaa 1349
>gb|AY108716.1| Zea mays PCO093600 mRNA sequence Length = 673 Score = 149 bits (75), Expect = 3e-33 Identities = 137/155 (88%), Gaps = 2/155 (1%) Strand = Plus / Plus Query: 15 tggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtggaagatgatccggc 73 ||||||||||||| ||||||| ||| |||||||| |||||||||||||||||| ||| || Sbjct: 173 tggacaaggagttcatcaatgcggccatgagcatcgatcctgagtggaagatggtccagc 232 Query: 74 ctgatcttggaaagaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaa 133 |||||||||||| || ||||||||||||| |||||||| ||||| || ||||||||||| Sbjct: 233 ctgatcttggaagga-ttgagaagtgggtgctgaggaaggcattcgacgacgaggagcag 291 Query: 134 ccattcctgccgaagcacattctgtacaggcagaa 168 ||||||||||| ||||| || || ||||| ||||| Sbjct: 292 ccattcctgcccaagcatatcctctacagacagaa 326
>gb|AY240926.1| Lycopersicon esculentum asparagine synthetase (AS1) mRNA, partial cds Length = 730 Score = 77.8 bits (39), Expect = 1e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 92 gagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccgaagcac 151 |||||||||||||| ||||| || |||||||| ||||||||||| | || || ||||| Sbjct: 616 gagaagtgggttcttaggaaggcgtttgatgatgaggagcaaccgtatcttccaaagcat 675 Query: 152 attctgtacaggcagaaag 170 ||||||||||||||||||| Sbjct: 676 attctgtacaggcagaaag 694
>gb|U77678.1|GMU77678 Glycine max asparagine synthetase 2 (AS2) mRNA, complete cds Length = 2143 Score = 71.9 bits (36), Expect = 6e-10 Identities = 72/84 (85%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccga 146 |||||||||||||| ||||||||| ||| |||||||| || ||||| || | ||||| | Sbjct: 1422 gaattgagaagtggattctgaggagagcctttgatgatgaagagcatccttatctgccaa 1481 Query: 147 agcacattctgtacaggcagaaag 170 |||||||| | ||||||||||||| Sbjct: 1482 agcacattttatacaggcagaaag 1505 Score = 63.9 bits (32), Expect = 1e-07 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 2 cgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtgg 60 ||||| ||||| |||||||||| ||| ||||||| |||||||| ||||| ||||||||| Sbjct: 1337 cgtgtaccatttttggacaaggcgtttatcaatgctgcaatgagtattgaccctgagtgg 1396 Query: 61 aagatgat 68 |||||||| Sbjct: 1397 aagatgat 1404
>emb|X82849.1|ZMASPSY Z.mays mRNA for aspargine synthetase Length = 2135 Score = 63.9 bits (32), Expect = 1e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccga 146 |||||||||||||||| ||||||| || || || ||||| ||||| || | |||||| | Sbjct: 1268 gaattgagaagtgggtcatgaggaaggcgttcgacgacgacgagcacccttacctgccca 1327 Query: 147 agcacattctgtacaggcagaaag 170 |||| ||||| ||||||||||||| Sbjct: 1328 agcatattctctacaggcagaaag 1351
>emb|AJ009952.1|PVU9952 Phaseolus vulgaris mRNA for asparagine synthetase type II Length = 2044 Score = 63.9 bits (32), Expect = 1e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccga 146 |||||||||||||| ||||||||| ||| |||||||| || || || || | ||||| | Sbjct: 1287 gaattgagaagtggattctgaggagagcctttgatgatgaagaccagccttatctgccaa 1346 Query: 147 agcacattctgtacaggcagaaag 170 |||||||| | ||||||||||||| Sbjct: 1347 agcacattttatacaggcagaaag 1370 Score = 40.1 bits (20), Expect = 2.1 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 8 ccattcttggacaaggag-ttatcaatgaggcaatgagcattga 50 ||||| |||||||||||| ||||||||| ||||||| |||||| Sbjct: 1208 ccatttttggacaaggagtttatcaatgctgcaatgaacattga 1251
>emb|X89410.1|LJAS2GENE L.japonicus mRNA for asparagine synthetase (clone LJAS2) Length = 2187 Score = 56.0 bits (28), Expect = 4e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccga 146 |||||||||| ||||| |||||||| || |||||||| || ||| | || | || || | Sbjct: 1412 gaattgagaaatgggtactgaggaaggcctttgatgatgaagagaatccttatcttccta 1471 Query: 147 agcacattctgtacaggcagaaag 170 ||||||||||||| |||||||||| Sbjct: 1472 agcacattctgtataggcagaaag 1495
>emb|X52180.1|PSAS2 Pea AS2 root mRNA for asparagine synthase (EC 6.3.5.4) Length = 2002 Score = 56.0 bits (28), Expect = 4e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccga 146 |||||||||||| || ||||||| |||||||||||||| ||| | || | ||||| | Sbjct: 1369 gaattgagaagtatattttgaggaaggcatttgatgacgaagagaatccttatctgccaa 1428 Query: 147 agcacattctgtacaggcagaaag 170 |||||||| |||| |||||||||| Sbjct: 1429 agcacattttgtataggcagaaag 1452
>ref|NM_180941.1| Arabidopsis thaliana ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) AT5G65010 (ASN2) transcript variant AT5G65010.1 mRNA, complete cds Length = 2068 Score = 52.0 bits (26), Expect = 6e-04 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgatcttggaaagaattgagaa 96 ||||||||||| ||||| ||||||||| ||||| ||||||||| || ||| || ||||| Sbjct: 1253 gcaatgagcatcgatccagagtggaagttgatcaagcctgatctcgg-aaggatcgagaa 1311 Query: 97 gtgggt 102 |||||| Sbjct: 1312 gtgggt 1317
>ref|NM_125900.2| Arabidopsis thaliana ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) AT5G65010 (ASN2) transcript variant AT5G65010.2 mRNA, complete cds Length = 2071 Score = 52.0 bits (26), Expect = 6e-04 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgatcttggaaagaattgagaa 96 ||||||||||| ||||| ||||||||| ||||| ||||||||| || ||| || ||||| Sbjct: 1253 gcaatgagcatcgatccagagtggaagttgatcaagcctgatctcgg-aaggatcgagaa 1311 Query: 97 gtgggt 102 |||||| Sbjct: 1312 gtgggt 1317
>ref|NM_121062.2| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.1 mRNA, complete cds Length = 2018 Score = 52.0 bits (26), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgat 78 ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1265 gcaatgagcatcgatccagagtggaagatgattaggcctgat 1306
>ref|NM_001036787.1| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.2 mRNA, complete cds Length = 2028 Score = 52.0 bits (26), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgat 78 ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1264 gcaatgagcatcgatccagagtggaagatgattaggcctgat 1305
>emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetase (clone LJAS1) Length = 2053 Score = 52.0 bits (26), Expect = 6e-04 Identities = 68/82 (82%) Strand = Plus / Plus Query: 89 attgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccgaag 148 |||||||||| ||||||||| || |||||||| || ||| |||| | ||||| ||| Sbjct: 1368 attgagaagtatattctgaggagggcctttgatgatgaagagaaaccttatctgccaaag 1427 Query: 149 cacattctgtacaggcagaaag 170 ||||||||||| |||||||||| Sbjct: 1428 cacattctgtataggcagaaag 1449 Score = 42.1 bits (21), Expect = 0.53 Identities = 55/65 (84%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 5 gtgccattcttggacaagg-agttatcaatgaggcaatgagcattgatcctgagtggaag 63 |||||||| |||||||||| | ||||||||| ||||||| |||||||| |||| ||| Sbjct: 1284 gtgccatttttggacaaggaatttatcaatgtcgcaatgaatattgatcccgagtataag 1343 Query: 64 atgat 68 ||||| Sbjct: 1344 atgat 1348
>gb|AY124866.1| Arabidopsis thaliana AT5g65010/MXK3_25 mRNA, complete cds Length = 1737 Score = 52.0 bits (26), Expect = 6e-04 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgatcttggaaagaattgagaa 96 ||||||||||| ||||| ||||||||| ||||| ||||||||| || ||| || ||||| Sbjct: 1219 gcaatgagcatcgatccagagtggaagttgatcaagcctgatctcgg-aaggatcgagaa 1277 Query: 97 gtgggt 102 |||||| Sbjct: 1278 gtgggt 1283
>gb|AF488726.1| Securigera parviflora asparagine synthetase (As2) mRNA, partial cds Length = 1367 Score = 52.0 bits (26), Expect = 6e-04 Identities = 68/82 (82%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccga 146 |||||||||||||| | |||||||| || |||||||| || ||| | || | ||||| | Sbjct: 1268 gaattgagaagtggatcctgaggaaggcctttgatgatgaagagaatccttatctgccaa 1327 Query: 147 agcacattctgtacaggcagaa 168 |||||||| |||| |||||||| Sbjct: 1328 agcacattttgtataggcagaa 1349
>gb|AY081945.1| Securigera parviflora asparagine synthetase (As1) mRNA, complete cds Length = 2109 Score = 52.0 bits (26), Expect = 6e-04 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 5 gtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgag 57 |||||||| ||||||||||| || ||||||| ||||||| ||||||||||||| Sbjct: 1333 gtgccatttttggacaaggaattcatcaatgttgcaatgaacattgatcctgag 1386
>gb|AF367340.1| Arabidopsis thaliana AT5g65010/MXK3_25 mRNA, complete cds Length = 2028 Score = 52.0 bits (26), Expect = 6e-04 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgatcttggaaagaattgagaa 96 ||||||||||| ||||| ||||||||| ||||| ||||||||| || ||| || ||||| Sbjct: 1252 gcaatgagcatcgatccagagtggaagttgatcaagcctgatctcgg-aaggatcgagaa 1310 Query: 97 gtgggt 102 |||||| Sbjct: 1311 gtgggt 1316
>gb|AY061820.1| Nicotiana tabacum asparagine synthetase (din6) mRNA, partial cds Length = 421 Score = 52.0 bits (26), Expect = 6e-04 Identities = 68/82 (82%) Strand = Plus / Plus Query: 89 attgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccgaag 148 ||||||||||||| ||| |||| || |||||||| |||||||| || | || || ||| Sbjct: 191 attgagaagtgggctctaaggagggcctttgatgatgaggagcatccctatctcccaaag 250 Query: 149 cacattctgtacaggcagaaag 170 ||||| || ||||||||||||| Sbjct: 251 cacatcctatacaggcagaaag 272
>gb|AF095453.1|AF095453 Arabidopsis thaliana asparagine synthetase (ASN2) mRNA, complete cds Length = 1960 Score = 52.0 bits (26), Expect = 6e-04 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgatcttggaaagaattgagaa 96 ||||||||||| ||||| ||||||||| ||||| ||||||||| || ||| || ||||| Sbjct: 1219 gcaatgagcatcgatccagagtggaagttgatcaagcctgatctcgg-aaggatcgagaa 1277 Query: 97 gtgggt 102 |||||| Sbjct: 1278 gtgggt 1283
>gb|AF095452.1|AF095452 Arabidopsis thaliana asparagine synthetase (ASN3) mRNA, complete cds Length = 1986 Score = 52.0 bits (26), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgat 78 ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1219 gcaatgagcatcgatccagagtggaagatgattaggcctgat 1260
>emb|BX830209.1|CNS09YW6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 52.0 bits (26), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgat 78 ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1225 gcaatgagcatcgatccagagtggaagatgattaggcctgat 1266
>gb|BT005014.1| Arabidopsis thaliana clone U20709 putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 1768 Score = 52.0 bits (26), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgat 78 ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1219 gcaatgagcatcgatccagagtggaagatgattaggcctgat 1260
>gb|BT003929.1| Arabidopsis thaliana clone RAFL15-17-K18 (R20709) putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 2026 Score = 52.0 bits (26), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgat 78 ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1265 gcaatgagcatcgatccagagtggaagatgattaggcctgat 1306
>dbj|AB019236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK3 Length = 81494 Score = 52.0 bits (26), Expect = 6e-04 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgatccggcctgatcttggaaagaattgagaa 96 ||||||||||| ||||| ||||||||| ||||| ||||||||| || ||| || ||||| Sbjct: 68817 gcaatgagcatcgatccagagtggaagttgatcaagcctgatctcgg-aaggatcgagaa 68875 Query: 97 gtgggt 102 |||||| Sbjct: 68876 gtgggt 68881
>gb|AF530460.1| Striga hermonthica asparagine synthetase (AS) mRNA, complete cds Length = 2278 Score = 52.0 bits (26), Expect = 6e-04 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 46 attgatcctgagtggaagatgatccggcctgatcttggaaagaattgagaagtgggttct 105 |||||||| || ||||| ||||| | |||||||||||| |||||||||||||| |||| Sbjct: 1471 attgatccggaatggaaaatgataagacctgatcttggac-gaattgagaagtggattct 1529 Query: 106 gaggaaagcatttgatgacgaggagcaacc 135 | | || || |||||||| |||||| |||| Sbjct: 1530 gcgcaacgcgtttgatgatgaggagaaacc 1559
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.002 Identities = 49/57 (85%) Strand = Plus / Minus Query: 92 gagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccgaag 148 |||||||||||| ||||||| || || || ||||||||||| || | |||||||||| Sbjct: 10093423 gagaagtgggttatgaggaaggcgttcgacgacgaggagcatccttacctgccgaag 10093367 Score = 44.1 bits (22), Expect = 0.13 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 2 cgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtgg 60 |||||||| ||| | ||||||||||| ||||| | || |||||||| || ||||||||| Sbjct: 10093613 cgtgtgccgttcctcgacaaggagttcatcaacgtcgccatgagcatggaccctgagtgg 10093554 Query: 61 aagatg 66 |||||| Sbjct: 10093553 aagatg 10093548 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 agcacattctgtacaggcagaaag 170 ||||||| |||||||||||||||| Sbjct: 10093281 agcacatactgtacaggcagaaag 10093258 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 tcaatgaggcaatgagcat 47 ||||||||||||||||||| Sbjct: 6540101 tcaatgaggcaatgagcat 6540119
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 50.1 bits (25), Expect = 0.002 Identities = 49/57 (85%) Strand = Plus / Minus Query: 92 gagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccgaag 148 |||||||||||| ||||||| || || || ||||||||||| || | |||||||||| Sbjct: 39044 gagaagtgggttatgaggaaggcgttcgacgacgaggagcatccttacctgccgaag 38988 Score = 44.1 bits (22), Expect = 0.13 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 2 cgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtgg 60 |||||||| ||| | ||||||||||| ||||| | || |||||||| || ||||||||| Sbjct: 39234 cgtgtgccgttcctcgacaaggagttcatcaacgtcgccatgagcatggaccctgagtgg 39175 Query: 61 aagatg 66 |||||| Sbjct: 39174 aagatg 39169 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 agcacattctgtacaggcagaaag 170 ||||||| |||||||||||||||| Sbjct: 38902 agcacatactgtacaggcagaaag 38879
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.002 Identities = 49/57 (85%) Strand = Plus / Minus Query: 92 gagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccgaag 148 |||||||||||| ||||||| || || || ||||||||||| || | |||||||||| Sbjct: 10091544 gagaagtgggttatgaggaaggcgttcgacgacgaggagcatccttacctgccgaag 10091488 Score = 44.1 bits (22), Expect = 0.13 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 2 cgtgtgccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgagtgg 60 |||||||| ||| | ||||||||||| ||||| | || |||||||| || ||||||||| Sbjct: 10091734 cgtgtgccgttcctcgacaaggagttcatcaacgtcgccatgagcatggaccctgagtgg 10091675 Query: 61 aagatg 66 |||||| Sbjct: 10091674 aagatg 10091669 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 agcacattctgtacaggcagaaag 170 ||||||| |||||||||||||||| Sbjct: 10091402 agcacatactgtacaggcagaaag 10091379 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 tcaatgaggcaatgagcat 47 ||||||||||||||||||| Sbjct: 6539314 tcaatgaggcaatgagcat 6539332
>emb|X99552.1|AOASPS A.officinalis gene encoding asparagine synthetase Length = 3812 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 92 gagaagtgggttctgaggaaagcatttgatga 123 ||||||||||| ||||||||||| |||||||| Sbjct: 2950 gagaagtgggtactgaggaaagcttttgatga 2981
>emb|X67958.1|AOASPSYNM A.officinalis mRNA for asparagine synthetase Length = 1978 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 92 gagaagtgggttctgaggaaagcatttgatga 123 ||||||||||| ||||||||||| |||||||| Sbjct: 1328 gagaagtgggtactgaggaaagcttttgatga 1359
>gb|AY103777.1| Zea mays PCO113531 mRNA sequence Length = 2209 Score = 46.1 bits (23), Expect = 0.034 Identities = 65/79 (82%) Strand = Plus / Plus Query: 92 gagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccgaagcac 151 ||||||||||| ||||||| || || || ||||| ||||| || | |||||| ||||| Sbjct: 1367 gagaagtgggtcatgaggaaggcgttcgacgacgacgagcacccttacctgcccaagcat 1426 Query: 152 attctgtacaggcagaaag 170 ||||| ||| ||||||||| Sbjct: 1427 attctctaccggcagaaag 1445
>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE Length = 125647 Score = 46.1 bits (23), Expect = 0.034 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 8 ccattcttggacaaggagtt-atcaatgaggcaatgagcattgatcctgag 57 ||||| |||||||||||||| ||||||| ||||||| |||||||||||| Sbjct: 6435 ccatttttggacaaggagtttatcaatgttgcaatgaatattgatcctgag 6485
>dbj|AB035248.1| Astragalus sinicus AsAS2 mRNA for asparagine synthetase, complete cds Length = 2133 Score = 46.1 bits (23), Expect = 0.034 Identities = 35/39 (89%) Strand = Plus / Plus Query: 85 aagaattgagaagtgggttctgaggaaagcatttgatga 123 |||||||||||| ||||| || |||||||| |||||||| Sbjct: 1352 aagaattgagaaatgggtactaaggaaagcttttgatga 1390
>emb|AL360334.1|ATF18D22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18D22 (ESSA project) Length = 57180 Score = 44.1 bits (22), Expect = 0.13 Identities = 28/30 (93%) Strand = Plus / Minus Query: 37 gcaatgagcattgatcctgagtggaagatg 66 ||||||||||| ||||| |||||||||||| Sbjct: 18728 gcaatgagcatcgatccagagtggaagatg 18699
>emb|AJ133522.1|PVU133522 Phaseolus vulgaris mRNA for asparagine synthetase type-I Length = 2086 Score = 44.1 bits (22), Expect = 0.13 Identities = 34/38 (89%) Strand = Plus / Plus Query: 86 agaattgagaagtgggttctgaggaaagcatttgatga 123 ||||||||||| ||||| ||||||| ||||||||||| Sbjct: 1414 agaattgagaaatgggtactgaggagggcatttgatga 1451
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.13 Identities = 37/42 (88%) Strand = Plus / Minus Query: 89 attgagaagtgggttctgaggaaagcatttgatgacgaggag 130 |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 8770925 attgagaaatgggttctccggaatgcatttgatgatgaggag 8770884 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 caatgaggcaatgagcatt 48 ||||||||||||||||||| Sbjct: 4456701 caatgaggcaatgagcatt 4456683
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 44.1 bits (22), Expect = 0.13 Identities = 37/42 (88%) Strand = Plus / Minus Query: 89 attgagaagtgggttctgaggaaagcatttgatgacgaggag 130 |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 41246 attgagaaatgggttctccggaatgcatttgatgatgaggag 41205
>dbj|AK100247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058E10, full insert sequence Length = 2265 Score = 44.1 bits (22), Expect = 0.13 Identities = 37/42 (88%) Strand = Plus / Plus Query: 89 attgagaagtgggttctgaggaaagcatttgatgacgaggag 130 |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 1392 attgagaaatgggttctccggaatgcatttgatgatgaggag 1433
>emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project) Length = 80088 Score = 44.1 bits (22), Expect = 0.13 Identities = 28/30 (93%) Strand = Plus / Minus Query: 37 gcaatgagcattgatcctgagtggaagatg 66 ||||||||||| ||||| |||||||||||| Sbjct: 78630 gcaatgagcatcgatccagagtggaagatg 78601
>gb|U55873.1|OSU55873 Oryza sativa asparagine synthetase mRNA, complete cds Length = 2172 Score = 44.1 bits (22), Expect = 0.13 Identities = 37/42 (88%) Strand = Plus / Plus Query: 89 attgagaagtgggttctgaggaaagcatttgatgacgaggag 130 |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 1403 attgagaaatgggttctccggaatgcatttgatgatgaggag 1444
>dbj|D83378.1|RICAS Oryza sativa (japonica cultivar-group) mRNA for asparagine synthetase, complete cds Length = 2141 Score = 44.1 bits (22), Expect = 0.13 Identities = 37/42 (88%) Strand = Plus / Plus Query: 89 attgagaagtgggttctgaggaaagcatttgatgacgaggag 130 |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 1403 attgagaaatgggttctccggaatgcatttgatgatgaggag 1444
>gb|AC084385.5| Mus musculus chromosome 15 clone RP23-54K18, complete sequence Length = 203712 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ggaaagaattgagaagtgggt 102 ||||||||||||||||||||| Sbjct: 107505 ggaaagaattgagaagtgggt 107525
>gb|AC121517.7| Mus musculus chromosome 15, clone RP23-120A12, complete sequence Length = 222681 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ggaaagaattgagaagtgggt 102 ||||||||||||||||||||| Sbjct: 197580 ggaaagaattgagaagtgggt 197560
>gb|AF061740.1| Elaeagnus umbellata asparagine synthetase (AS) mRNA, complete cds Length = 2092 Score = 42.1 bits (21), Expect = 0.53 Identities = 39/45 (86%) Strand = Plus / Plus Query: 85 aagaattgagaagtgggttctgaggaaagcatttgatgacgagga 129 |||||||||||| ||||| || ||||| || |||||||| ||||| Sbjct: 1358 aagaattgagaaatgggtgcttaggaaggcctttgatgatgagga 1402
>gb|AC139579.3| Mus musculus BAC clone RP23-139E6 from chromosome 7, complete sequence Length = 194033 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 atcttggaaagaattgagaag 97 ||||||||||||||||||||| Sbjct: 123038 atcttggaaagaattgagaag 123018
>gb|AY208747.1| Securigera parviflora asparagine synthetase (AS2) gene, complete cds Length = 7074 Score = 42.1 bits (21), Expect = 0.53 Identities = 33/37 (89%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatga 123 |||||||||||||| | |||||||| || |||||||| Sbjct: 5744 gaattgagaagtggatcctgaggaaggcctttgatga 5780
>dbj|AB035247.1| Astragalus sinicus AsAS1 mRNA for asparagine synthetase, complete cds Length = 1931 Score = 42.1 bits (21), Expect = 0.53 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 8 ccattcttggacaaggag-ttatcaatgaggcaatgagcattgatcctg 55 ||||| |||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 1197 ccatttttggacaaggagtttatcaatgttgcaatgaatattgatcctg 1245
>gb|DQ227307.1| Glycine max asparagine synthetase mRNA, complete cds Length = 1752 Score = 40.1 bits (20), Expect = 2.1 Identities = 68/84 (80%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccga 146 |||||||||| |||| ||||||| || |||||||| || || || || | ||||| | Sbjct: 1275 gaattgagaaatgggcactgaggagggcctttgatgatgaagaacatccttatctgccaa 1334 Query: 147 agcacattctgtacaggcagaaag 170 |||||||| | ||||||||||||| Sbjct: 1335 agcacattttatacaggcagaaag 1358
>ref|XM_382770.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02594.1) partial mRNA Length = 2007 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 accattcctgccgaagcaca 152 |||||||||||||||||||| Sbjct: 1042 accattcctgccgaagcaca 1061
>emb|X84448.1|BOASPSYN B.oleracea mRNA for asparagine synthetase Length = 2085 Score = 40.1 bits (20), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 92 gagaagtgggttctgaggaaagcatttgatga 123 |||||||||||||| |||| ||| |||||||| Sbjct: 1308 gagaagtgggttctaaggagagcctttgatga 1339
>emb|X52179.1|PSAS1 Pea AS1 nodule mRNA for asparagine synthase (EC 6.3.5.4) Length = 2200 Score = 40.1 bits (20), Expect = 2.1 Identities = 68/84 (80%) Strand = Plus / Plus Query: 85 aagaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgcc 144 |||||||||||| ||| |||| || || || |||||||| || ||| | |||| ||||| Sbjct: 1362 aagaattgagaaatggattctaagaaaggcctttgatgatgaagagaatccatatctgcc 1421 Query: 145 gaagcacattctgtacaggcagaa 168 ||||||||| | || |||||||| Sbjct: 1422 taagcacattttatataggcagaa 1445
>emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 5/7 Length = 329861 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 accattcctgccgaagcaca 152 |||||||||||||||||||| Sbjct: 155718 accattcctgccgaagcaca 155699
>gb|AF190729.1| Helianthus annuus asparagine synthetase (HAS2) mRNA, complete cds Length = 1850 Score = 40.1 bits (20), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgat 68 |||||||||||||| || ||||||||||||| Sbjct: 1244 gcaatgagcattgacccaaagtggaagatgat 1275
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 accattcctgccgaagcaca 152 |||||||||||||||||||| Sbjct: 1394436 accattcctgccgaagcaca 1394417
>gb|AF005724.1| Sandersonia aurantiaca asparagine synthetase (SAND1) mRNA, complete cds Length = 2121 Score = 40.1 bits (20), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgat 68 |||||||| ||||||||||| ||||| ||||| Sbjct: 1261 gcaatgagtattgatcctgaatggaaaatgat 1292
>gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) mRNA, complete cds Length = 2108 Score = 40.1 bits (20), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 gcaatgagcattgatcctgagtggaagatgat 68 ||||||| ||||||||||||||| || ||||| Sbjct: 1369 gcaatgaacattgatcctgagtgtaaaatgat 1400
>emb|CR956402.15| M.truncatula DNA sequence from clone MTH2-50J5 on chromosome 3, complete sequence Length = 142361 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aaagaattgagaagtgggtt 103 |||||||||||||||||||| Sbjct: 56502 aaagaattgagaagtgggtt 56521
>gb|U55874.1|GMU55874 Glycine max asparagine synthetase mRNA, complete cds Length = 2211 Score = 40.1 bits (20), Expect = 2.1 Identities = 68/84 (80%) Strand = Plus / Plus Query: 87 gaattgagaagtgggttctgaggaaagcatttgatgacgaggagcaaccattcctgccga 146 |||||||||| ||||| || |||| || |||||||| || || || || | ||||| | Sbjct: 1441 gaattgagaaatgggtactaaggagggcctttgatgatgaagaacatccttatctgccaa 1500 Query: 147 agcacattctgtacaggcagaaag 170 |||||||| | ||||||||||||| Sbjct: 1501 agcacattttatacaggcagaaag 1524
>gb|AC137516.3| Mus musculus BAC clone RP23-259P18 from 1, complete sequence Length = 162037 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tctgaggaaagcatttgatg 122 |||||||||||||||||||| Sbjct: 139826 tctgaggaaagcatttgatg 139845
>gb|AC149371.2| Phakopsora pachyrhizi clone JGIAFNA-53G19, complete sequence Length = 40450 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 79 cttggaaagaattgagaag 97 ||||||||||||||||||| Sbjct: 25228 cttggaaagaattgagaag 25210
>gb|AC109147.19| Mus musculus chromosome 8, clone RP23-341D16, complete sequence Length = 184600 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 18000 cattctgtacaggcagaaa 18018
>gb|AC163640.5| Mus musculus BAC clone RP24-182L3 from chromosome 16, complete sequence Length = 168350 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 gttctgaggaaagcatttg 119 ||||||||||||||||||| Sbjct: 23331 gttctgaggaaagcatttg 23349
>ref|XM_467464.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2665 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 ctgatcttggaaagaattg 92 ||||||||||||||||||| Sbjct: 2499 ctgatcttggaaagaattg 2517
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 114 catttgatgacgaggagcaacca 136 ||||| ||||||||||||||||| Sbjct: 987525 catttcatgacgaggagcaacca 987503
>gb|AC113585.4| Trypanosoma brucei chromosome 5 clone RPCI93-27M3, complete sequence Length = 127380 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 114 catttgatgacgaggagcaacca 136 ||||| ||||||||||||||||| Sbjct: 29526 catttcatgacgaggagcaacca 29504
>gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosome 9, complete sequence Length = 163348 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 aagaattgagaagtgggtt 103 ||||||||||||||||||| Sbjct: 154966 aagaattgagaagtgggtt 154948
>ref|XM_990335.1| PREDICTED: Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), transcript variant 2 (Lsm6), mRNA Length = 2107 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 564 cattctgtacaggcagaaa 546
>ref|XM_990309.1| PREDICTED: Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), transcript variant 1 (Lsm6), mRNA Length = 2106 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 563 cattctgtacaggcagaaa 545
>ref|XM_919757.2| PREDICTED: Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), transcript variant 8 (Lsm6), mRNA Length = 2107 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 564 cattctgtacaggcagaaa 546
>ref|XM_919752.2| PREDICTED: Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), transcript variant 7 (Lsm6), mRNA Length = 2106 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 563 cattctgtacaggcagaaa 545
>ref|XM_899712.2| PREDICTED: Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), transcript variant 4 (Lsm6), mRNA Length = 2107 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 564 cattctgtacaggcagaaa 546
>ref|XM_899706.2| PREDICTED: Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), transcript variant 3 (Lsm6), mRNA Length = 2106 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 563 cattctgtacaggcagaaa 545
>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence Length = 217511 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 aagaattgagaagtgggtt 103 ||||||||||||||||||| Sbjct: 35966 aagaattgagaagtgggtt 35948
>ref|XM_820603.1| Trypanosoma brucei TREU927 clone RPCI93-27M3 protein kinase (Tb927.5.3160) partial mRNA Length = 4275 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 114 catttgatgacgaggagcaacca 136 ||||| ||||||||||||||||| Sbjct: 1520 catttcatgacgaggagcaacca 1542
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 tcaatgaggcaatgagcat 47 ||||||||||||||||||| Sbjct: 82863 tcaatgaggcaatgagcat 82881
>gb|BC030427.1| Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), mRNA (cDNA clone MGC:40879 IMAGE:5370660), complete cds Length = 1965 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 527 cattctgtacaggcagaaa 509
>emb|AL353674.17| Human DNA sequence from clone RP11-162O6 on chromosome 6, complete sequence Length = 169897 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 48 tgatcctgagtggaagatgatcc 70 ||||||||| ||||||||||||| Sbjct: 28169 tgatcctgactggaagatgatcc 28191
>emb|Z72354.1|VFAS1 V.faba mRNA for asparagine synthetase Length = 2154 Score = 38.2 bits (19), Expect = 8.3 Identities = 47/55 (85%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 5 gtgccattcttggacaagga-gttatcaatgaggcaatgagcattgatcctgagt 58 |||||||| ||||||||||| ||||||| | |||||| |||||||||||||| Sbjct: 1306 gtgccatttttggacaaggactttatcaaggctgcaatggacattgatcctgagt 1360
>gb|DQ455293.1| Medicago truncatula cDNA-AFLP fragment BT11M44_226 sequence Length = 277 Score = 38.2 bits (19), Expect = 8.3 Identities = 34/39 (87%) Strand = Plus / Plus Query: 85 aagaattgagaagtgggttctgaggaaagcatttgatga 123 |||||||||||| ||| |||| ||||| || |||||||| Sbjct: 133 aagaattgagaaatggattctaaggaaggcttttgatga 171
>gb|AC154564.3| Mus musculus BAC clone RP23-402A16 from chromosome 16, complete sequence Length = 214128 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 gttctgaggaaagcatttg 119 ||||||||||||||||||| Sbjct: 169949 gttctgaggaaagcatttg 169967
>gb|BC098230.1| Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), mRNA (cDNA clone MGC:107039 IMAGE:3372313), complete cds Length = 1985 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 526 cattctgtacaggcagaaa 508
>dbj|AK141884.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130051J03 product:LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), full insert sequence Length = 3733 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 622 cattctgtacaggcagaaa 604
>dbj|AK158236.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930044L07 product:LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), full insert sequence Length = 2108 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 565 cattctgtacaggcagaaa 547
>dbj|AK161686.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730540C09 product:LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), full insert sequence Length = 2055 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 629 cattctgtacaggcagaaa 611
>emb|BX470244.6| Zebrafish DNA sequence from clone CH211-8G12 in linkage group 21, complete sequence Length = 200867 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 gatcctgagtggaagatga 67 ||||||||||||||||||| Sbjct: 188429 gatcctgagtggaagatga 188447
>emb|AJ496567.2|PSY496567 Pinus sylvestris mRNA for putative asparagine synthetase (asn1 gene) Length = 2110 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 146 aagcacattctgtacaggcagaa 168 ||||||||||||||||| ||||| Sbjct: 1419 aagcacattctgtacagacagaa 1441
>dbj|AK078392.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530441M19 product:U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM6 homolog [Homo sapiens], full insert sequence Length = 1536 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 625 cattctgtacaggcagaaa 607
>dbj|AK019126.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410088K19 product:U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM6 homolog [Homo sapiens], full insert sequence Length = 661 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 635 cattctgtacaggcagaaa 617
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 ctgatcttggaaagaattg 92 ||||||||||||||||||| Sbjct: 29693347 ctgatcttggaaagaattg 29693365
>gb|AC078795.19| Homo sapiens 3 BAC RP11-362K14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125445 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 agaagtgggttctgaggaa 111 ||||||||||||||||||| Sbjct: 125312 agaagtgggttctgaggaa 125294
>gb|AC078802.14| Homo sapiens 3 BAC RP11-816J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 47601 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 agaagtgggttctgaggaa 111 ||||||||||||||||||| Sbjct: 45776 agaagtgggttctgaggaa 45794
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 caatgaggcaatgagcatt 48 ||||||||||||||||||| Sbjct: 51431 caatgaggcaatgagcatt 51413
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 caatgaggcaatgagcatt 48 ||||||||||||||||||| Sbjct: 104382 caatgaggcaatgagcatt 104364
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 ctgatcttggaaagaattg 92 ||||||||||||||||||| Sbjct: 62326 ctgatcttggaaagaattg 62344
>emb|BX247944.6| Zebrafish DNA sequence from clone CH211-227L2 in linkage group 24, complete sequence Length = 155665 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 agaattgagaagtgggttc 104 ||||||||||||||||||| Sbjct: 79482 agaattgagaagtgggttc 79500
>dbj|AK070855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066G02, full insert sequence Length = 2664 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 ctgatcttggaaagaattg 92 ||||||||||||||||||| Sbjct: 2498 ctgatcttggaaagaattg 2516
>gb|AC154868.3| Monodelphis domestica, clone XX-211C4, complete sequence Length = 129158 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 29 tcaatgaggcaatgagcattgat 51 |||||||| |||||||||||||| Sbjct: 65380 tcaatgagtcaatgagcattgat 65358
>dbj|AB079779.1| Homo sapiens gene for OSZF, complete cds Length = 12720 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 agaagtgggttctgaggaa 111 ||||||||||||||||||| Sbjct: 1121 agaagtgggttctgaggaa 1139
>emb|AL713990.16| Mouse DNA sequence from clone RP23-224N1 on chromosome X, complete sequence Length = 163330 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 caatgaggcaatgagcatt 48 ||||||||||||||||||| Sbjct: 76780 caatgaggcaatgagcatt 76798
>gb|AC167022.4| Mus musculus BAC clone RP23-183A4 from chromosome 8, complete sequence Length = 224462 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cattctgtacaggcagaaa 169 ||||||||||||||||||| Sbjct: 98265 cattctgtacaggcagaaa 98247 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,475,371 Number of Sequences: 3902068 Number of extensions: 1475371 Number of successful extensions: 100947 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 100557 Number of HSP's gapped (non-prelim): 374 length of query: 170 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 148 effective length of database: 17,147,199,772 effective search space: 2537785566256 effective search space used: 2537785566256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)