>gb|DQ019626.1| Triticum aestivum pre-mRNA processing factor (RSZ22) mRNA, complete
           cds
          Length = 940

 Score =  371 bits (187), Expect = 1e-99
 Identities = 209/215 (97%), Gaps = 1/215 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   cgtggtcgcagctatagcaagt-accagtccgtgccagggatgattctcctgatgctaaa 66
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 627 cgtggtcgcagctatagcaagtcaccagtccgtgccagggatgattctcctgatgctaaa 686

                                                                       
Query: 67  gggtatcgccgcagccggagttagatctgaagcctgtgtccgatgcatgttctctgcgag 126
           ||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| |||
Sbjct: 687 gggtatcgccgcagccggagttagacctgaagcccgtgtccaatgcatgttctctgagag 746

                                                                       
Query: 127 aagttactctttagctctgcctgctaggagtactgagacctgacgtcaacttcttgactt 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aagttactctttagctctgcctgctaggagtactgagacctgacgtcaacttcttgactt 806

                                              
Query: 187 ctgttaaggtttcaactttatctatagtttatgtt 221
           | |||||||||||||||||||||||||||||||||
Sbjct: 807 cggttaaggtttcaactttatctatagtttatgtt 841



 Score =  145 bits (73), Expect = 1e-31
 Identities = 79/81 (97%)
 Strand = Plus / Plus

                                                                       
Query: 248 ttatgtggtggatgtggtatgcaactgagacctattacctgtctttctgtgtgttaagaa 307
           |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 857 ttatgtggtggatgtggtatgcaactgagatctattacctttctttctgtgtgttaagaa 916

                                
Query: 308 ggcatcgtcctgcacttctgc 328
           |||||||||||||||||||||
Sbjct: 917 ggcatcgtcctgcacttctgc 937

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 60/68 (88%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                           
Query: 286     ctgtctttctgtgtgttaagaaggcatcgtcctgcacttctgcttaaacgactcagccaa 345
               |||||||||||||||| || ||||||||| ||||||   ||||||||||||||| ||| |
Sbjct: 4442348 ctgtctttctgtgtgtcaataaggcatcggcctgca---ctgcttaaacgactcggccga 4442404

                       
Query: 346     ctacggct 353
               ||||||||
Sbjct: 4442405 ctacggct 4442412

>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005A05
          Length = 162520

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 60/68 (88%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                         
Query: 286   ctgtctttctgtgtgttaagaaggcatcgtcctgcacttctgcttaaacgactcagccaa 345
             |||||||||||||||| || ||||||||| ||||||   ||||||||||||||| ||| |
Sbjct: 37078 ctgtctttctgtgtgtcaataaggcatcggcctgca---ctgcttaaacgactcggccga 37134

                     
Query: 346   ctacggct 353
             ||||||||
Sbjct: 37135 ctacggct 37142

>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0470C02
          Length = 158849

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 60/68 (88%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                         
Query: 286   ctgtctttctgtgtgttaagaaggcatcgtcctgcacttctgcttaaacgactcagccaa 345
             |||||||||||||||| || ||||||||| ||||||   ||||||||||||||| ||| |
Sbjct: 90029 ctgtctttctgtgtgtcaataaggcatcggcctgca---ctgcttaaacgactcggccga 90085

                     
Query: 346   ctacggct 353
             ||||||||
Sbjct: 90086 ctacggct 90093

>gb|AY103797.1| Zea mays PCO118328 mRNA sequence
          Length = 1464

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 323 ttctgcttaaacgactcagccaactacggctct 355
           ||||||||||||||||| |||||||||||||||
Sbjct: 848 ttctgcttaaacgactcggccaactacggctct 880

>gb|AY104860.1| Zea mays PCO131393 mRNA sequence
          Length = 1093

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 43/48 (89%), Gaps = 3/48 (6%)
 Strand = Plus / Plus

                                                           
Query: 306 aaggcatcgtcctgcacttctgcttaaacgactcagccaactacggct 353
           ||||||||||||||||||   ||||||||||||| ||| |||||||||
Sbjct: 835 aaggcatcgtcctgcact---gcttaaacgactcggccgactacggct 879

>gb|BT018240.1| Zea mays clone EL01N0563B09.c mRNA sequence
          Length = 825

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 323 ttctgcttaaacgactcagccaactacggctct 355
           |||||||| |||||||| |||||||||||||||
Sbjct: 791 ttctgctttaacgactcggccaactacggctct 823

>ref|XM_507018.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.35
           mRNA
          Length = 1394

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 323 ttctgcttaaacgactcagccaactac 349
           |||||||||| ||||||||||||||||
Sbjct: 820 ttctgcttaagcgactcagccaactac 846

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 323      ttctgcttaaacgactcagccaactac 349
                |||||||||| ||||||||||||||||
Sbjct: 33561105 ttctgcttaagcgactcagccaactac 33561079

>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0054K20
          Length = 153584

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 323    ttctgcttaaacgactcagccaactac 349
              |||||||||| ||||||||||||||||
Sbjct: 135980 ttctgcttaagcgactcagccaactac 135954

>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1046_F07
          Length = 114184

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 323   ttctgcttaaacgactcagccaactac 349
             |||||||||| ||||||||||||||||
Sbjct: 31776 ttctgcttaagcgactcagccaactac 31750

>dbj|AK073359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027A21, full
           insert sequence
          Length = 1390

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 323 ttctgcttaaacgactcagccaactac 349
           |||||||||| ||||||||||||||||
Sbjct: 817 ttctgcttaagcgactcagccaactac 843

>ref|XM_391656.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical
           protein (FG11480.1) partial mRNA
          Length = 1629

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 219 gtttgcttctgattctgtcatt 240
           ||||||||||||||||||||||
Sbjct: 617 gtttgcttctgattctgtcatt 638

>dbj|AK071765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N11, full
           insert sequence
          Length = 1425

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 42/48 (87%), Gaps = 3/48 (6%)
 Strand = Plus / Plus

                                                           
Query: 306 aaggcatcgtcctgcacttctgcttaaacgactcagccaactacggct 353
           ||||||||| ||||||||   ||||||||||||| ||| |||||||||
Sbjct: 795 aaggcatcggcctgcact---gcttaaacgactcggccgactacggct 839

>gb|AC112200.3| Homo sapiens chromosome 5 clone RP11-54F2, complete sequence
          Length = 107502

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 tttcaactttatctatagttt 216
           |||||||||||||||||||||
Sbjct: 597 tttcaactttatctatagttt 577

>gb|AC106760.2| Homo sapiens chromosome 5 clone RP11-215G15, complete sequence
          Length = 78190

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  tttcaactttatctatagttt 216
            |||||||||||||||||||||
Sbjct: 1538 tttcaactttatctatagttt 1558

>ref|NM_008220.2| Mus musculus hemoglobin, beta adult major chain (Hbb-b1), mRNA
          Length = 630

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 gtttatgtttgcttctgattctgt 236
           ||||| ||||||||||||||||||
Sbjct: 1   gtttacgtttgcttctgattctgt 24

>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence
          Length = 242112

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    gccaactacggctcttcagt 360
              ||||||||||||||||||||
Sbjct: 236942 gccaactacggctcttcagt 236923

>dbj|AK028067.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched
           library, clone:1600012O19 product:hemoglobin, beta adult
           major chain, full insert sequence
          Length = 630

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 gtttatgtttgcttctgattctgt 236
           ||||| ||||||||||||||||||
Sbjct: 1   gtttacgtttgcttctgattctgt 24

>gb|AC068723.5|AC068723 Homo sapiens chromosome 15 clone RP11-126E3 map 15q21.3, complete
              sequence
          Length = 166151

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    tttcaactttatctatagtt 215
              ||||||||||||||||||||
Sbjct: 144080 tttcaactttatctatagtt 144061

>gb|AC025272.6|AC025272 Homo sapiens chromosome 15 clone RP11-548M13 map 15q21.3, complete
            sequence
          Length = 170749

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  tttcaactttatctatagtt 215
            ||||||||||||||||||||
Sbjct: 1999 tttcaactttatctatagtt 1980

>gb|AC174768.1| Gasterosteus aculeatus clone VMRC28-49C14, complete sequence
          Length = 142399

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tttatctatagtttatgttt 222
             ||||||||||||||||||||
Sbjct: 29020 tttatctatagtttatgttt 29001

>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence
          Length = 198383

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   gccaactacggctcttcagt 360
             ||||||||||||||||||||
Sbjct: 57552 gccaactacggctcttcagt 57533

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     aagggtatcgccgcagccgg 84
              ||||||||||||||||||||
Sbjct: 450564 aagggtatcgccgcagccgg 450583

>gb|AC171206.2| Mus musculus BAC clone RP23-416I23 from chromosome 9, complete sequence
          Length = 194366

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   ctaggagtactgagacctga 169
             ||||||||||||||||||||
Sbjct: 74867 ctaggagtactgagacctga 74848


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,880,245
Number of Sequences: 3902068
Number of extensions: 2880245
Number of successful extensions: 48160
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48088
Number of HSP's gapped (non-prelim): 67
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)