ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdb07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 7e-22
2gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome... 84 6e-13
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
4gb|AC145574.5| Mus musculus BAC clone RP24-411C16 from chromosom... 46 0.14
5gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig co... 46 0.14
6gb|AC174081.1| Mus musculus BAC clone RP24-376P15 from chromosom... 46 0.14
7gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 44 0.54
8gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 44 0.54
9gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 44 0.54
10gb|AC159139.9| Mus musculus 10 BAC RP24-370M23 (Roswell Park Can... 44 0.54
11gb|CP000001.1| Bacillus cereus E33L, complete genome 44 0.54
12gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 44 0.54
13gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 44 0.54
14gb|AE010368.1| Methanopyrus kandleri AV19 section 67 of 157 of t... 42 2.1
15emb|AL157831.29| Human DNA sequence from clone RP11-108B14 on ch... 42 2.1
16emb|CR378665.1| Photobacterium profundum SS9; segment 3/12 42 2.1
17emb|BX294128.19| Zebrafish DNA sequence from clone DKEYP-35F12 i... 42 2.1
18gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cance... 42 2.1
19gb|AC103691.2| Homo sapiens chromosome 15, clone RP11-959H21, co... 42 2.1
20gb|AC013553.14| Homo sapiens chromosome 15, clone RP11-325L12, c... 42 2.1
21dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 2.1
22gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cance... 42 2.1
23emb|BX005263.10| Mouse DNA sequence from clone RP23-395K13 on ch... 42 2.1
24emb|BX119978.6| Mouse DNA sequence from clone RP23-354H3 on chro... 42 2.1
25emb|CR388132.9| Zebrafish DNA sequence from clone DKEY-23A23 in ... 42 2.1
26gb|BC105767.1| Rattus norvegicus xylosyltransferase II, mRNA (cD... 40 8.4
27ref|NM_022296.2| Rattus norvegicus xylosyltransferase II (Xylt2)... 40 8.4
28gb|AC124083.14| Mus musculus chromosome 5, clone RP24-400H4, com... 40 8.4
29gb|AC105323.28| Mus musculus chromosome 3, clone RP23-424L10, co... 40 8.4
30gb|AE013198.1| Thermoanaerobacter tengcongensis MB4, section 225... 40 8.4
31ref|XM_420162.1| PREDICTED: Gallus gallus similar to Oligophreni... 40 8.4
32gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, com... 40 8.4
33gb|AC111128.24| Mus musculus chromosome 18, clone RP23-338I7, co... 40 8.4
34gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome... 40 8.4
35gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 8.4
36gb|AC132106.4| Mus musculus BAC clone RP24-240D2 from chromosome... 40 8.4
37emb|CT009577.5| Mouse DNA sequence from clone RP23-24C24 on chro... 40 8.4
38gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosom... 40 8.4
39gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complet... 40 8.4
40gb|AC121576.2| Mus musculus BAC clone RP23-244D21 from 18, compl... 40 8.4
41gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, comp... 40 8.4
42gb|AC092098.3| Homo sapiens BAC clone RP11-533K11 from 7, comple... 40 8.4
43gb|AC146290.1| Pan troglodytes BAC clone CH251-549P23 from Y, co... 40 8.4
44emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chro... 40 8.4
45emb|AL139133.8| Human DNA sequence from clone RP11-185C19 on chr... 40 8.4
46emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.4
47gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Canc... 40 8.4
48gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosom... 40 8.4
49gb|AC119840.12| Mus musculus chromosome 3, clone RP24-112E5, com... 40 8.4
50dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, c... 40 8.4
51emb|BX548247.6| Zebrafish DNA sequence from clone DKEY-177G18 in... 40 8.4
52gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.4
53dbj|AK126211.1| Homo sapiens cDNA FLJ44223 fis, clone THYMU30061... 40 8.4
54gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, comp... 40 8.4
55gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cance... 40 8.4
56gb|AC149092.6| Pan troglodytes BAC clone CH251-553I6 from chromo... 40 8.4
57gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, comp... 40 8.4
58gb|AC099030.1| Drosophila melanogaster, chromosome 2R, region 53... 40 8.4
59gb|AC099021.1| Drosophila melanogaster, chromosome 2R, region 53... 40 8.4
60gb|AC161019.3| Pan troglodytes BAC clone CH251-7O2 from chromoso... 40 8.4
61gb|AC155643.8| Mus musculus 10 BAC RP24-132F13 (Roswell Park Can... 40 8.4
62gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, comple... 40 8.4
63emb|CR387771.1| Gallus gallus finished cDNA, clone ChEST535m13 40 8.4
64gb|AC154736.2| Mus musculus BAC clone RP24-389J14 from chromosom... 40 8.4
65gb|AC022209.4|AC022209 Homo sapiens BAC clone RP11-588M21 from 1... 40 8.4
66gb|AC158623.5| Mus musculus 10 BAC RP23-302A11 (Roswell Park Can... 40 8.4
67emb|BX005167.12| Mouse DNA sequence from clone RP23-247K19 on ch... 40 8.4
68gb|AC126415.9| Mus musculus chromosome 5, clone RP24-476K21, com... 40 8.4
69gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y... 40 8.4
70gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, co... 40 8.4
71emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in ... 40 8.4
72emb|AJ969201.2| Helicobacter pullorum partial gyrB gene for gyra... 40 8.4
73emb|CR847514.13| Zebrafish DNA sequence from clone DKEYP-11D6 in... 40 8.4
74emb|AJ295749.2|RNO295749 Rattus norvegicus mRNA for xylosyltrans... 40 8.4
75gb|AE003805.3| Drosophila melanogaster chromosome 2R, section 45... 40 8.4
76gb|AC148935.6| Pan troglodytes BAC clone CH251-485J2 from chromo... 40 8.4
77emb|AL837516.14| Mouse DNA sequence from clone RP23-234L8 on chr... 40 8.4
78gb|AC132603.4| Mus musculus BAC clone RP24-66C10 from 1, complet... 40 8.4
79gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complet... 40 8.4
80gb|AC004641.1|AC004641 Drosophila melanogaster DNA sequence (P1s... 40 8.4
81gb|AC137555.4| Mus musculus BAC clone RP23-445B17 from 1, comple... 40 8.4
82gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map ... 40 8.4 
>dbj|AK121844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101G01, full
           insert sequence
          Length = 924

 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                       
Query: 180 gatggctccctggctaccagaggtgattggtggcaaggttcactgtactactaaatactt 239
           |||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||
Sbjct: 604 gatggctccctggctaccagaggtgattggtggcaaggttcactctattactaagtactt 663

                                
Query: 240 tgcagtggactctcctattgt 260
           ||||| || ||||||| ||||
Sbjct: 664 tgcagagggctctccttttgt 684



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 6   agccctgctaaaggtcgtgttgcttacaaagatggaaaacaattttacccaaacgagtcc 65
           |||||| |||||| ||||| ||| ||||| ||||| |||||||  || ||||||||||| 
Sbjct: 424 agccctactaaagctcgtggtgcatacaaggatggtaaacaatcatatccaaacgagtca 483

                                                 
Query: 66  tcagagtcgccttattttggttcgtctgtgcattacgg 103
           || |||||||| |||||||| || ||||||||||||||
Sbjct: 484 tcggagtcgccatattttggctcttctgtgcattacgg 521
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>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06,
            complete sequence
          Length = 145323

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                        
Query: 6    agccctgctaaaggtcgtgttgcttacaaagatggaaaacaattttacccaaacgagtcc 65
            |||||| |||||| ||||| ||| ||||| ||||| |||||||  || ||||||||||| 
Sbjct: 3461 agccctactaaagctcgtggtgcatacaaggatggtaaacaatcatatccaaacgagtca 3402

                                                  
Query: 66   tcagagtcgccttattttggttcgtctgtgcattacgg 103
            || |||||||| |||||||| || ||||||||||||||
Sbjct: 3401 tcggagtcgccatattttggctcttctgtgcattacgg 3364



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 39/39 (100%)
 Strand = Plus / Minus

                                                   
Query: 180  gatggctccctggctaccagaggtgattggtggcaaggt 218
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 3194 gatggctccctggctaccagaggtgattggtggcaaggt 3156
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                            
Query: 6        agccctgctaaaggtcgtgttgcttacaaagatggaaaacaattttacccaaacgagtcc 65
                |||||| |||||| ||||| ||| ||||| ||||| |||||||  || ||||||||||| 
Sbjct: 22160196 agccctactaaagctcgtggtgcatacaaggatggtaaacaatcatatccaaacgagtca 22160137

                                                      
Query: 66       tcagagtcgccttattttggttcgtctgtgcattacgg 103
                || |||||||| |||||||| || ||||||||||||||
Sbjct: 22160136 tcggagtcgccatattttggctcttctgtgcattacgg 22160099



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 39/39 (100%)
 Strand = Plus / Minus

                                                       
Query: 180      gatggctccctggctaccagaggtgattggtggcaaggt 218
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 22159929 gatggctccctggctaccagaggtgattggtggcaaggt 22159891
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>gb|AC145574.5| Mus musculus BAC clone RP24-411C16 from chromosome 6, complete sequence
          Length = 147836

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 411   acatatatatgtatttcccttttgtttgccc 441
             |||||||| |||||||||||| |||||||||
Sbjct: 49205 acatatatctgtatttcccttctgtttgccc 49175
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>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox
             cluster, cholinesterase, and COLP5alpha genes, complete
             sequence
          Length = 796348

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 316   tcatcaggcataaaaagaagaag 338
             |||||||||||||||||||||||
Sbjct: 81609 tcatcaggcataaaaagaagaag 81631
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>gb|AC174081.1| Mus musculus BAC clone RP24-376P15 from chromosome 6, complete sequence
          Length = 153392

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 411    acatatatatgtatttcccttttgtttgccc 441
              |||||||| |||||||||||| |||||||||
Sbjct: 130449 acatatatctgtatttcccttctgtttgccc 130419
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 416     tatatgtatttcccttttgttt 437
               ||||||||||||||||||||||
Sbjct: 1624440 tatatgtatttcccttttgttt 1624461
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 416     tatatgtatttcccttttgttt 437
               ||||||||||||||||||||||
Sbjct: 1595380 tatatgtatttcccttttgttt 1595401
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 416     tatatgtatttcccttttgttt 437
               ||||||||||||||||||||||
Sbjct: 1595332 tatatgtatttcccttttgttt 1595353
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>gb|AC159139.9| Mus musculus 10 BAC RP24-370M23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 185202

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 403    agatgtagacatatatatgtat 424
              ||||||||||||||||||||||
Sbjct: 150042 agatgtagacatatatatgtat 150063
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 416     tatatgtatttcccttttgttt 437
               ||||||||||||||||||||||
Sbjct: 1621495 tatatgtatttcccttttgttt 1621516
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 416     tatatgtatttcccttttgttt 437
               ||||||||||||||||||||||
Sbjct: 1595257 tatatgtatttcccttttgttt 1595278
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 416     tatatgtatttcccttttgttt 437
               ||||||||||||||||||||||
Sbjct: 1720647 tatatgtatttcccttttgttt 1720668
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>gb|AE010368.1| Methanopyrus kandleri AV19 section 67 of 157 of the complete genome
          Length = 12015

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 277  ggagcaggtcgagctggtagg 297
            |||||||||||||||||||||
Sbjct: 7758 ggagcaggtcgagctggtagg 7778
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>emb|AL157831.29| Human DNA sequence from clone RP11-108B14 on chromosome 10 Contains a
             ribosomal protein L29 (RPL29)(HIP,HUMRPL29) pseudogene, a
             CGI-45 protein (CGI-45) pseudogene, a novel pseudogene, a
             pseudogene similar to part of PSME2
             (PA28B,REGbeta,PA28beta) (proteasome (prosome, macropain)
             activator subunit 2 (PA28 beta)) and a CpG island,
             complete sequence
          Length = 176577

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 555   ctgcatgctttatgtatcctt 575
             |||||||||||||||||||||
Sbjct: 33761 ctgcatgctttatgtatcctt 33741
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>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12
          Length = 347213

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     aaggtcgtgttgcttacaaag 36
              |||||||||||||||||||||
Sbjct: 168250 aaggtcgtgttgcttacaaag 168270
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>emb|BX294128.19| Zebrafish DNA sequence from clone DKEYP-35F12 in linkage group 10,
             complete sequence
          Length = 160042

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    aaaacaattttacccaaacga 61
             |||||||||||||||||||||
Sbjct: 19884 aaaacaattttacccaaacga 19864
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>gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 241211

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    aaagatggaaaacaattttac 53
             |||||||||||||||||||||
Sbjct: 61428 aaagatggaaaacaattttac 61408
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>gb|AC103691.2| Homo sapiens chromosome 15, clone RP11-959H21, complete sequence
          Length = 82781

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 413   atatatatgtatttccctttt 433
             |||||||||||||||||||||
Sbjct: 74495 atatatatgtatttccctttt 74475
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>gb|AC013553.14| Homo sapiens chromosome 15, clone RP11-325L12, complete sequence
          Length = 184864

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 413   atatatatgtatttccctttt 433
             |||||||||||||||||||||
Sbjct: 13019 atatatatgtatttccctttt 12999
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 329     aaagaagaagtcatagtgggg 349
               |||||||||||||||||||||
Sbjct: 3720270 aaagaagaagtcatagtgggg 3720250
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>gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197401

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    aaagatggaaaacaattttac 53
             |||||||||||||||||||||
Sbjct: 34739 aaagatggaaaacaattttac 34759
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>emb|BX005263.10| Mouse DNA sequence from clone RP23-395K13 on chromosome X, complete
           sequence
          Length = 175998

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 37  atggaaaacaattttacccaa 57
           |||||||||||||||||||||
Sbjct: 357 atggaaaacaattttacccaa 337
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>emb|BX119978.6| Mouse DNA sequence from clone RP23-354H3 on chromosome X, complete
             sequence
          Length = 72115

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    atggaaaacaattttacccaa 57
             |||||||||||||||||||||
Sbjct: 70472 atggaaaacaattttacccaa 70452
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>emb|CR388132.9| Zebrafish DNA sequence from clone DKEY-23A23 in linkage group 4,
             complete sequence
          Length = 206525

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 37    atggaaaacaattttacccaaacga 61
             |||||||| ||||||||||||||||
Sbjct: 63894 atggaaaataattttacccaaacga 63918
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>gb|BC105767.1| Rattus norvegicus xylosyltransferase II, mRNA (cDNA clone MGC:124608
            IMAGE:7930580), complete cds
          Length = 3375

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  ggctccctggctaccagagg 202
            ||||||||||||||||||||
Sbjct: 3146 ggctccctggctaccagagg 3127
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>ref|NM_022296.2| Rattus norvegicus xylosyltransferase II (Xylt2), mRNA
          Length = 3375

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  ggctccctggctaccagagg 202
            ||||||||||||||||||||
Sbjct: 3146 ggctccctggctaccagagg 3127
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>gb|AC124083.14| Mus musculus chromosome 5, clone RP24-400H4, complete sequence
          Length = 172336

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 216    ggttcactgtactactaaatactt 239
              ||||||||||||| ||||||||||
Sbjct: 154484 ggttcactgtacttctaaatactt 154461
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>gb|AC105323.28| Mus musculus chromosome 3, clone RP23-424L10, complete sequence
          Length = 183897

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   atatatatgtatttcccttt 432
             ||||||||||||||||||||
Sbjct: 72002 atatatatgtatttcccttt 71983
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>gb|AE013198.1| Thermoanaerobacter tengcongensis MB4, section 225 of 244 of the
            complete genome
          Length = 10429

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  aacaaggaataaaaaggagc 281
            ||||||||||||||||||||
Sbjct: 4830 aacaaggaataaaaaggagc 4811
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>ref|XM_420162.1| PREDICTED: Gallus gallus similar to Oligophrenin 1 (LOC422163), mRNA
          Length = 1928

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 473  tgggactggcagggcagcagcaaa 496
            |||| |||||||||||||||||||
Sbjct: 1389 tggggctggcagggcagcagcaaa 1412
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>gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, complete sequence
          Length = 182113

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    gatgtagacatatatatgta 423
              ||||||||||||||||||||
Sbjct: 166292 gatgtagacatatatatgta 166273
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>gb|AC111128.24| Mus musculus chromosome 18, clone RP23-338I7, complete sequence
          Length = 209784

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 412   catatatatgtatttcccttttgt 435
             ||||||||| ||||||||||||||
Sbjct: 28599 catatatatatatttcccttttgt 28576
to top
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence
          Length = 190937

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     aattttacccaaacgagtcc 65
              ||||||||||||||||||||
Sbjct: 130796 aattttacccaaacgagtcc 130777
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      ttgcttacaaagatggaaaa 44
               ||||||||||||||||||||
Sbjct: 6341335 ttgcttacaaagatggaaaa 6341316
to top
>gb|AC132106.4| Mus musculus BAC clone RP24-240D2 from chromosome 17, complete sequence
          Length = 169722

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   atgtagacatatatatgtat 424
             ||||||||||||||||||||
Sbjct: 58267 atgtagacatatatatgtat 58248
to top
>emb|CT009577.5| Mouse DNA sequence from clone RP23-24C24 on chromosome 16, complete
              sequence
          Length = 258862

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    tgctgaagtgtaatgggact 479
              ||||||||||||||||||||
Sbjct: 205669 tgctgaagtgtaatgggact 205688
to top
>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence
          Length = 162693

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     aattttacccaaacgagtcc 65
              ||||||||||||||||||||
Sbjct: 108451 aattttacccaaacgagtcc 108432
to top
>gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complete sequence
          Length = 157928

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    atgtagacatatatatgtat 424
              ||||||||||||||||||||
Sbjct: 126564 atgtagacatatatatgtat 126583
to top
>gb|AC121576.2| Mus musculus BAC clone RP23-244D21 from 18, complete sequence
          Length = 158243

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 412   catatatatgtatttcccttttgt 435
             ||||||||| ||||||||||||||
Sbjct: 21864 catatatatatatttcccttttgt 21887
to top
>gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, complete sequence
          Length = 197121

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 411   acatatatatgtatttcccttttg 434
             ||||||||||||| ||||||||||
Sbjct: 40098 acatatatatgtaattcccttttg 40075
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>gb|AC092098.3| Homo sapiens BAC clone RP11-533K11 from 7, complete sequence
          Length = 198786

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 411    acatatatatgtatttcccttttg 434
              ||||||||||||| ||||||||||
Sbjct: 104772 acatatatatgtaattcccttttg 104749
to top
>gb|AC146290.1| Pan troglodytes BAC clone CH251-549P23 from Y, complete sequence
          Length = 176345

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   gatgtagacatatatatgta 423
             ||||||||||||||||||||
Sbjct: 95986 gatgtagacatatatatgta 95967
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>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the 5'
              end of the SLICK gene for a sodium- and chloride-activated
              ATP-sensitive potassium channel, complete sequence
          Length = 185560

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    tagacatatatatgtatttc 427
              ||||||||||||||||||||
Sbjct: 154517 tagacatatatatgtatttc 154498
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>emb|AL139133.8| Human DNA sequence from clone RP11-185C19 on chromosome 1q31.1-31.3
            Contains the 3' end of the HRPT2 gene for
            hyperparathyroidism 2 (with jaw tumor), complete sequence
          Length = 19720

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  ctactaaatactttgcagtg 246
            ||||||||||||||||||||
Sbjct: 6270 ctactaaatactttgcagtg 6289
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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 435    tttgccctatgttacctgatttga 458
              |||| |||||||||||||||||||
Sbjct: 205991 tttggcctatgttacctgatttga 205968
to top
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 214578

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    aggtgattggtggcaaggtt 219
              ||||||||||||||||||||
Sbjct: 169249 aggtgattggtggcaaggtt 169230
to top
>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete
             sequence
          Length = 209583

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   atgtagacatatatatgtat 424
             ||||||||||||||||||||
Sbjct: 42326 atgtagacatatatatgtat 42345
to top
>gb|AC119840.12| Mus musculus chromosome 3, clone RP24-112E5, complete sequence
          Length = 206159

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    atatatatgtatttcccttt 432
              ||||||||||||||||||||
Sbjct: 205644 atatatatgtatttcccttt 205625
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>dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, complete sequence
          Length = 219969

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    gatgtagacatatatatgta 423
              ||||||||||||||||||||
Sbjct: 115404 gatgtagacatatatatgta 115385
to top
>emb|BX548247.6| Zebrafish DNA sequence from clone DKEY-177G18 in linkage group 23,
             complete sequence
          Length = 180406

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   ggtgtgttttaggaatattt 601
             ||||||||||||||||||||
Sbjct: 96659 ggtgtgttttaggaatattt 96678
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 404      gatgtagacatatatatgta 423
                ||||||||||||||||||||
Sbjct: 20843596 gatgtagacatatatatgta 20843615
to top
>dbj|AK126211.1| Homo sapiens cDNA FLJ44223 fis, clone THYMU3006118, highly  similar
            to Homo sapiens molybdenum cofactor synthesis 2 (MOCS2)
          Length = 2848

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   tacaaagatggaaaacaatt 49
            ||||||||||||||||||||
Sbjct: 1355 tacaaagatggaaaacaatt 1336
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>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tacaaagatggaaaacaatt 49
             ||||||||||||||||||||
Sbjct: 90651 tacaaagatggaaaacaatt 90632
to top
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 250218

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   aggtgattggtggcaaggtt 219
             ||||||||||||||||||||
Sbjct: 97932 aggtgattggtggcaaggtt 97913
to top
>gb|AC149092.6| Pan troglodytes BAC clone CH251-553I6 from chromosome 7, complete
             sequence
          Length = 194702

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   atatatatgtatttcccttt 432
             ||||||||||||||||||||
Sbjct: 73270 atatatatgtatttcccttt 73251
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>gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, complete sequence
          Length = 174831

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tacaaagatggaaaacaatt 49
             ||||||||||||||||||||
Sbjct: 41662 tacaaagatggaaaacaatt 41643
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>gb|AC099030.1| Drosophila melanogaster, chromosome 2R, region 53F-54X, BAC clone
             BACR09M08, complete sequence
          Length = 179283

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ctgctaaaggtcgtgttgct 29
             ||||||||||||||||||||
Sbjct: 34162 ctgctaaaggtcgtgttgct 34143
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>gb|AC099021.1| Drosophila melanogaster, chromosome 2R, region 53E-54X, BAC clone
              BACR03E17, complete sequence
          Length = 160338

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     ctgctaaaggtcgtgttgct 29
              ||||||||||||||||||||
Sbjct: 138811 ctgctaaaggtcgtgttgct 138792
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>gb|AC161019.3| Pan troglodytes BAC clone CH251-7O2 from chromosome 7, complete
             sequence
          Length = 165769

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   atatatatgtatttcccttt 432
             ||||||||||||||||||||
Sbjct: 62216 atatatatgtatttcccttt 62235
to top
>gb|AC155643.8| Mus musculus 10 BAC RP24-132F13 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 187480

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    atgtagacatatatatgtat 424
              ||||||||||||||||||||
Sbjct: 143482 atgtagacatatatatgtat 143501
to top
>gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, complete sequence
          Length = 178105

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    atatatatgtatttcccttt 432
              ||||||||||||||||||||
Sbjct: 163633 atatatatgtatttcccttt 163652
to top
>emb|CR387771.1| Gallus gallus finished cDNA, clone ChEST535m13
          Length = 1425

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 473 tgggactggcagggcagcagcaaa 496
           |||| |||||||||||||||||||
Sbjct: 866 tggggctggcagggcagcagcaaa 889
to top
>gb|AC154736.2| Mus musculus BAC clone RP24-389J14 from chromosome 16, complete sequence
          Length = 141092

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    tgctgaagtgtaatgggact 479
              ||||||||||||||||||||
Sbjct: 128586 tgctgaagtgtaatgggact 128605
to top
>gb|AC022209.4|AC022209 Homo sapiens BAC clone RP11-588M21 from 11, complete sequence
          Length = 177314

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   tagacatatatatgtatttc 427
             ||||||||||||||||||||
Sbjct: 76975 tagacatatatatgtatttc 76956
to top
>gb|AC158623.5| Mus musculus 10 BAC RP23-302A11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191932

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    atgtagacatatatatgtat 424
              ||||||||||||||||||||
Sbjct: 112918 atgtagacatatatatgtat 112899
to top
>emb|BX005167.12| Mouse DNA sequence from clone RP23-247K19 on chromosome X, complete
              sequence
          Length = 212046

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    atgtagacatatatatgtat 424
              ||||||||||||||||||||
Sbjct: 176488 atgtagacatatatatgtat 176469
to top
>gb|AC126415.9| Mus musculus chromosome 5, clone RP24-476K21, complete sequence
          Length = 168525

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 216   ggttcactgtactactaaatactt 239
             ||||||||||||| ||||||||||
Sbjct: 42720 ggttcactgtacttctaaatactt 42697
to top
>gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y, complete sequence
          Length = 176524

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    gatgtagacatatatatgta 423
              ||||||||||||||||||||
Sbjct: 160426 gatgtagacatatatatgta 160407
to top
>gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, complete sequence
          Length = 180157

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 419   atgtatttcccttttgtttgccct 442
             ||||||||||||||||||| ||||
Sbjct: 89858 atgtatttcccttttgttttccct 89881
to top
>emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in linkage group 7,
             complete sequence
          Length = 199752

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   ggtaggctgtagagttgaca 311
             ||||||||||||||||||||
Sbjct: 80706 ggtaggctgtagagttgaca 80725
to top
>emb|AJ969201.2| Helicobacter pullorum partial gyrB gene for gyrase B, strain CCUG
           33842
          Length = 1098

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 423 atttcccttttgtttgccct 442
           ||||||||||||||||||||
Sbjct: 670 atttcccttttgtttgccct 651
to top
>emb|CR847514.13| Zebrafish DNA sequence from clone DKEYP-11D6 in linkage group 3, complete
              sequence
          Length = 165569

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    gagttgacatgagtcatcag 322
              ||||||||||||||||||||
Sbjct: 102529 gagttgacatgagtcatcag 102510
to top
>emb|AJ295749.2|RNO295749 Rattus norvegicus mRNA for xylosyltransferase II (XT-II gene)
          Length = 2806

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  ggctccctggctaccagagg 202
            ||||||||||||||||||||
Sbjct: 2688 ggctccctggctaccagagg 2669
to top
>gb|AE003805.3| Drosophila melanogaster chromosome 2R, section 45 of 73 of the complete
              sequence
          Length = 272948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     ctgctaaaggtcgtgttgct 29
              ||||||||||||||||||||
Sbjct: 152659 ctgctaaaggtcgtgttgct 152640
to top
>gb|AC148935.6| Pan troglodytes BAC clone CH251-485J2 from chromosome 7, complete
             sequence
          Length = 215177

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   atatatatgtatttcccttt 432
             ||||||||||||||||||||
Sbjct: 84929 atatatatgtatttcccttt 84910
to top
>emb|AL837516.14| Mouse DNA sequence from clone RP23-234L8 on chromosome 2, complete
              sequence
          Length = 202046

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     aaagatggaaaacaatttta 52
              ||||||||||||||||||||
Sbjct: 100512 aaagatggaaaacaatttta 100531
to top
>gb|AC132603.4| Mus musculus BAC clone RP24-66C10 from 1, complete sequence
          Length = 218575

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 552   ttgctgcatgctttatgtatcctt 575
             |||||||| |||||||||||||||
Sbjct: 20008 ttgctgcaggctttatgtatcctt 19985
to top
>gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complete sequence
          Length = 237935

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    atgtagacatatatatgtat 424
              ||||||||||||||||||||
Sbjct: 220713 atgtagacatatatatgtat 220732
to top
>gb|AC004641.1|AC004641 Drosophila melanogaster DNA sequence (P1s DS07321 (D175), DS05993
             (D241), and DS06306 (D173)), complete sequence
          Length = 154985

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ctgctaaaggtcgtgttgct 29
             ||||||||||||||||||||
Sbjct: 71635 ctgctaaaggtcgtgttgct 71654
to top
>gb|AC137555.4| Mus musculus BAC clone RP23-445B17 from 1, complete sequence
          Length = 174607

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 552    ttgctgcatgctttatgtatcctt 575
              |||||||| |||||||||||||||
Sbjct: 135174 ttgctgcaggctttatgtatcctt 135151
to top
>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence
          Length = 234061

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    atgtagacatatatatgtat 424
              ||||||||||||||||||||
Sbjct: 180033 atgtagacatatatatgtat 180014


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,308,916
Number of Sequences: 3902068
Number of extensions: 6308916
Number of successful extensions: 175261
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 174586
Number of HSP's gapped (non-prelim): 675
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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