ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdb05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1939 Score = 161 bits (81), Expect = 2e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 64 gggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcgac 123 ||||||||||| |||||||| ||||||||||| || | ||||||||||| ||||| ||| Sbjct: 93 gggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggac 152 Query: 124 ctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccggc 183 ||||| || |||||||| ||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct: 153 ctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggc 212 Query: 184 gctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| |||||||||||| | ||||| ||||||||||| Sbjct: 213 gccgacgagctcctcgccgtcaccgacgtcctcctcgcctc 253 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/130 (81%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 290 ccgaccacggcgccatctcccgcgcctttcgccgcctcgcgctcctcctc---caatcca 346 ||||||||| |||| |||||||||||| ||||||||||| ||||||||| || || Sbjct: 325 ccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggaca 384 Query: 347 gcaacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcc 406 |||||| ||||| || || || || |||||| || ||||| ||||||||||||| ||| Sbjct: 385 ccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcc 444 Query: 407 tctctgatcc 416 |||| ||||| Sbjct: 445 tctccgatcc 454
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 161 bits (81), Expect = 2e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 64 gggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcgac 123 ||||||||||| |||||||| ||||||||||| || | ||||||||||| ||||| ||| Sbjct: 15594198 gggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggac 15594139 Query: 124 ctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccggc 183 ||||| || |||||||| ||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct: 15594138 ctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggc 15594079 Query: 184 gctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| |||||||||||| | ||||| ||||||||||| Sbjct: 15594078 gccgacgagctcctcgccgtcaccgacgtcctcctcgcctc 15594038 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/130 (81%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 290 ccgaccacggcgccatctcccgcgcctttcgccgcctcgcgctcctcctc---caatcca 346 ||||||||| |||| |||||||||||| ||||||||||| ||||||||| || || Sbjct: 15593966 ccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggaca 15593907 Query: 347 gcaacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcc 406 |||||| ||||| || || || || |||||| || ||||| ||||||||||||| ||| Sbjct: 15593906 ccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcc 15593847 Query: 407 tctctgatcc 416 |||| ||||| Sbjct: 15593846 tctccgatcc 15593837 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 agcgcttcgccgagcgcgcggtggag 162 ||||| |||||||||||||||||||| Sbjct: 12198836 agcgcgtcgccgagcgcgcggtggag 12198861
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 161 bits (81), Expect = 2e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 64 gggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcgac 123 ||||||||||| |||||||| ||||||||||| || | ||||||||||| ||||| ||| Sbjct: 93749 gggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggac 93690 Query: 124 ctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccggc 183 ||||| || |||||||| ||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct: 93689 ctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggc 93630 Query: 184 gctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| |||||||||||| | ||||| ||||||||||| Sbjct: 93629 gccgacgagctcctcgccgtcaccgacgtcctcctcgcctc 93589 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/130 (81%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 290 ccgaccacggcgccatctcccgcgcctttcgccgcctcgcgctcctcctc---caatcca 346 ||||||||| |||| |||||||||||| ||||||||||| ||||||||| || || Sbjct: 93517 ccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggaca 93458 Query: 347 gcaacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcc 406 |||||| ||||| || || || || |||||| || ||||| ||||||||||||| ||| Sbjct: 93457 ccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcc 93398 Query: 407 tctctgatcc 416 |||| ||||| Sbjct: 93397 tctccgatcc 93388
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 161 bits (81), Expect = 2e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 64 gggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcgac 123 ||||||||||| |||||||| ||||||||||| || | ||||||||||| ||||| ||| Sbjct: 4152 gggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggac 4093 Query: 124 ctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccggc 183 ||||| || |||||||| ||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct: 4092 ctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggc 4033 Query: 184 gctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| |||||||||||| | ||||| ||||||||||| Sbjct: 4032 gccgacgagctcctcgccgtcaccgacgtcctcctcgcctc 3992 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/130 (81%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 290 ccgaccacggcgccatctcccgcgcctttcgccgcctcgcgctcctcctc---caatcca 346 ||||||||| |||| |||||||||||| ||||||||||| ||||||||| || || Sbjct: 3920 ccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggaca 3861 Query: 347 gcaacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcc 406 |||||| ||||| || || || || |||||| || ||||| ||||||||||||| ||| Sbjct: 3860 ccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcc 3801 Query: 407 tctctgatcc 416 |||| ||||| Sbjct: 3800 tctccgatcc 3791
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 161 bits (81), Expect = 2e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 64 gggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcgac 123 ||||||||||| |||||||| ||||||||||| || | ||||||||||| ||||| ||| Sbjct: 15588732 gggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggac 15588673 Query: 124 ctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccggc 183 ||||| || |||||||| ||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct: 15588672 ctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggc 15588613 Query: 184 gctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| |||||||||||| | ||||| ||||||||||| Sbjct: 15588612 gccgacgagctcctcgccgtcaccgacgtcctcctcgcctc 15588572 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/130 (81%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 290 ccgaccacggcgccatctcccgcgcctttcgccgcctcgcgctcctcctc---caatcca 346 ||||||||| |||| |||||||||||| ||||||||||| ||||||||| || || Sbjct: 15588500 ccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggaca 15588441 Query: 347 gcaacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcc 406 |||||| ||||| || || || || |||||| || ||||| ||||||||||||| ||| Sbjct: 15588440 ccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcc 15588381 Query: 407 tctctgatcc 416 |||| ||||| Sbjct: 15588380 tctccgatcc 15588371 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 agcgcttcgccgagcgcgcggtggag 162 ||||| |||||||||||||||||||| Sbjct: 12195599 agcgcgtcgccgagcgcgcggtggag 12195624
>dbj|AK106027.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-C11, full insert sequence Length = 1667 Score = 161 bits (81), Expect = 2e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 64 gggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcgac 123 ||||||||||| |||||||| ||||||||||| || | ||||||||||| ||||| ||| Sbjct: 93 gggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggac 152 Query: 124 ctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccggc 183 ||||| || |||||||| ||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct: 153 ctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggc 212 Query: 184 gctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| |||||||||||| | ||||| ||||||||||| Sbjct: 213 gccgacgagctcctcgccgtcaccgacgtcctcctcgcctc 253 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/130 (81%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 290 ccgaccacggcgccatctcccgcgcctttcgccgcctcgcgctcctcctc---caatcca 346 ||||||||| |||| |||||||||||| ||||||||||| ||||||||| || || Sbjct: 325 ccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggaca 384 Query: 347 gcaacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcc 406 |||||| ||||| || || || || |||||| || ||||| ||||||||||||| ||| Sbjct: 385 ccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcc 444 Query: 407 tctctgatcc 416 |||| ||||| Sbjct: 445 tctccgatcc 454
>dbj|AK073726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058M13, full insert sequence Length = 1802 Score = 161 bits (81), Expect = 2e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 64 gggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcgac 123 ||||||||||| |||||||| ||||||||||| || | ||||||||||| ||||| ||| Sbjct: 94 gggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggac 153 Query: 124 ctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccggc 183 ||||| || |||||||| ||||| |||||||||||||||||||| ||||| ||| ||||| Sbjct: 154 ctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggc 213 Query: 184 gctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| |||||||||||| | ||||| ||||||||||| Sbjct: 214 gccgacgagctcctcgccgtcaccgacgtcctcctcgcctc 254 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/130 (81%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 290 ccgaccacggcgccatctcccgcgcctttcgccgcctcgcgctcctcctc---caatcca 346 ||||||||| |||| |||||||||||| ||||||||||| ||||||||| || || Sbjct: 326 ccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggaca 385 Query: 347 gcaacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcc 406 |||||| ||||| || || || || |||||| || ||||| ||||||||||||| ||| Sbjct: 386 ccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcc 445 Query: 407 tctctgatcc 416 |||| ||||| Sbjct: 446 tctccgatcc 455
>ref|NM_189855.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1976 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 85 tggctggagattgcggcaaagctcctcgctgcgcgcgacctcgttggctgcaagcgcttc 144 ||||||||||| || | ||||| ||||| ||||| ||||| || |||||||||||| || Sbjct: 79 tggctggagatcgccgggaagctgctcgcggcgcgggacctggtcggctgcaagcgcctc 138 Query: 145 gccgagcgcgcggtggaggcggatccgcttctctccggcgctgacgaactcctcgccgtc 204 || |||||||||||||| ||||| || || ||| | ||||| ||||| ||||||||||| Sbjct: 139 gcggagcgcgcggtggacgcggagcccctcctcccgggcgccgacgagctcctcgccgtg 198 Query: 205 gctgacgttctcctcgc 221 || ||||| |||||||| Sbjct: 199 gccgacgtcctcctcgc 215
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 85 tggctggagattgcggcaaagctcctcgctgcgcgcgacctcgttggctgcaagcgcttc 144 ||||||||||| || | ||||| ||||| ||||| ||||| || |||||||||||| || Sbjct: 25583237 tggctggagatcgccgggaagctgctcgcggcgcgggacctggtcggctgcaagcgcctc 25583296 Query: 145 gccgagcgcgcggtggaggcggatccgcttctctccggcgctgacgaactcctcgccgtc 204 || |||||||||||||| ||||| || || ||| | ||||| ||||| ||||||||||| Sbjct: 25583297 gcggagcgcgcggtggacgcggagcccctcctcccgggcgccgacgagctcctcgccgtg 25583356 Query: 205 gctgacgttctcctcgc 221 || ||||| |||||||| Sbjct: 25583357 gccgacgtcctcctcgc 25583373 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cgccgcctcgcgctcctcct 338 |||||||||||||||||||| Sbjct: 25221151 cgccgcctcgcgctcctcct 25221132
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 85 tggctggagattgcggcaaagctcctcgctgcgcgcgacctcgttggctgcaagcgcttc 144 ||||||||||| || | ||||| ||||| ||||| ||||| || |||||||||||| || Sbjct: 37210 tggctggagatcgccgggaagctgctcgcggcgcgggacctggtcggctgcaagcgcctc 37269 Query: 145 gccgagcgcgcggtggaggcggatccgcttctctccggcgctgacgaactcctcgccgtc 204 || |||||||||||||| ||||| || || ||| | ||||| ||||| ||||||||||| Sbjct: 37270 gcggagcgcgcggtggacgcggagcccctcctcccgggcgccgacgagctcctcgccgtg 37329 Query: 205 gctgacgttctcctcgc 221 || ||||| |||||||| Sbjct: 37330 gccgacgtcctcctcgc 37346
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0560B08 Length = 128098 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 85 tggctggagattgcggcaaagctcctcgctgcgcgcgacctcgttggctgcaagcgcttc 144 ||||||||||| || | ||||| ||||| ||||| ||||| || |||||||||||| || Sbjct: 120507 tggctggagatcgccgggaagctgctcgcggcgcgggacctggtcggctgcaagcgcctc 120566 Query: 145 gccgagcgcgcggtggaggcggatccgcttctctccggcgctgacgaactcctcgccgtc 204 || |||||||||||||| ||||| || || ||| | ||||| ||||| ||||||||||| Sbjct: 120567 gcggagcgcgcggtggacgcggagcccctcctcccgggcgccgacgagctcctcgccgtg 120626 Query: 205 gctgacgttctcctcgc 221 || ||||| |||||||| Sbjct: 120627 gccgacgtcctcctcgc 120643
>dbj|AK099859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110N04, full insert sequence Length = 1976 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 85 tggctggagattgcggcaaagctcctcgctgcgcgcgacctcgttggctgcaagcgcttc 144 ||||||||||| || | ||||| ||||| ||||| ||||| || |||||||||||| || Sbjct: 79 tggctggagatcgccgggaagctgctcgcggcgcgggacctggtcggctgcaagcgcctc 138 Query: 145 gccgagcgcgcggtggaggcggatccgcttctctccggcgctgacgaactcctcgccgtc 204 || |||||||||||||| ||||| || || ||| | ||||| ||||| ||||||||||| Sbjct: 139 gcggagcgcgcggtggacgcggagcccctcctcccgggcgccgacgagctcctcgccgtg 198 Query: 205 gctgacgttctcctcgc 221 || ||||| |||||||| Sbjct: 199 gccgacgtcctcctcgc 215
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 106 ctcctcgctgcgcgcgacctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcg 165 |||||||| ||| | |||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 26199866 ctcctcgcggcgagggacctcgtcggctgcaagcggttcgcggagcgcgcggtggaggcg 26199925 Query: 166 gatccgcttctctccggcgctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| ||| | ||||| || | |||||| || || | ||||| ||||||||||| Sbjct: 26199926 gacccgctactccctggcgccaacaagctcctcaccatcaccgacgtcctcctcgcctc 26199984 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 62 gcgggagggtgcaagcggagcgatggctggagat 95 ||||||||||||| |||||| | ||||||||||| Sbjct: 26199027 gcgggagggtgcaggcggagtggtggctggagat 26199060
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 106 ctcctcgctgcgcgcgacctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcg 165 |||||||| ||| | |||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 64406 ctcctcgcggcgagggacctcgtcggctgcaagcggttcgcggagcgcgcggtggaggcg 64465 Query: 166 gatccgcttctctccggcgctgacgaactcctcgccgtcgctgacgttctcctcgcctc 224 || ||||| ||| | ||||| || | |||||| || || | ||||| ||||||||||| Sbjct: 64466 gacccgctactccctggcgccaacaagctcctcaccatcaccgacgtcctcctcgcctc 64524 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 62 gcgggagggtgcaagcggagcgatggctggagat 95 ||||||||||||| |||||| | ||||||||||| Sbjct: 63567 gcgggagggtgcaggcggagtggtggctggagat 63600
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 103 aagctcctcgctgcgcgcgacctcgttggctgcaagcgcttcgccgagcgcgcggtggag 162 ||||| ||||| ||||| ||||| || ||||||||||| | || ||||||||||| ||| Sbjct: 327293 aagctactcgccgcgcgggacctggtcggctgcaagcgactggcggagcgcgcggttgag 327352 Query: 163 gcggatccgcttctctccggcgctgacgaactcctcgccgtcgctgacgttctcctcgcc 222 || || ||| ||| |||| || ||||| |||||||||||||| ||||| ||||||||| Sbjct: 327353 gctgacccgtacctccccggtgcggacgagctcctcgccgtcgccgacgtcctcctcgcc 327412 Query: 223 tc 224 || Sbjct: 327413 tc 327414
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 103 aagctcctcgctgcgcgcgacctcgttggctgcaagcgcttcgccgagcgcgcggtggag 162 ||||| ||||| ||||| ||||| || ||||||||||| | || ||||||||||| ||| Sbjct: 322845 aagctactcgccgcgcgggacctggtcggctgcaagcgactggcggagcgcgcggttgag 322904 Query: 163 gcggatccgcttctctccggcgctgacgaactcctcgccgtcgctgacgttctcctcgcc 222 || || ||| ||| |||| || ||||| |||||||||||||| ||||| ||||||||| Sbjct: 322905 gctgacccgtacctccccggtgcggacgagctcctcgccgtcgccgacgtcctcctcgcc 322964 Query: 223 tc 224 || Sbjct: 322965 tc 322966
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030E22, complete sequence Length = 135468 Score = 69.9 bits (35), Expect = 7e-09 Identities = 128/159 (80%) Strand = Plus / Plus Query: 63 cgggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcga 122 |||||||||||| |||||||| || ||||||| | || ||||||||||| ||| | || Sbjct: 3274 cgggagggtgcaggcggagcggtgattggagatcgtggggaagctcctcgcggcgaggga 3333 Query: 123 cctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccgg 182 |||| | |||||||| ||||| |||||||||||||||| ||| |||| ||| | || Sbjct: 3334 gttcgtcaggtgcaagcggttcgcagagcgcgcggtggaggtggacccgcccctccctgg 3393 Query: 183 cgctgacgaactcctcgccgtcgctgacgttctcctcgc 221 || ||||| |||||| ||||| | ||||| |||||||| Sbjct: 3394 tgccgacgagctcctcaccgtcaccgacgtcctcctcgc 3432 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 348 caacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcct 407 |||||||||||| || || ||||| |||||| || ||||| ||||||||||||| |||| Sbjct: 3568 caacccccacccgggcgccgatgtcgccctcagcctcgtccacgacgcctacgccatcct 3627 Query: 408 ctc 410 ||| Sbjct: 3628 ctc 3630
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 69.9 bits (35), Expect = 7e-09 Identities = 128/159 (80%) Strand = Plus / Minus Query: 63 cgggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcga 122 |||||||||||| |||||||| || ||||||| | || ||||||||||| ||| | || Sbjct: 6687 cgggagggtgcaggcggagcggtgattggagatcgtggggaagctcctcgcggcgaggga 6628 Query: 123 cctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccgg 182 |||| | |||||||| ||||| |||||||||||||||| ||| |||| ||| | || Sbjct: 6627 gttcgtcaggtgcaagcggttcgcagagcgcgcggtggaggtggacccgcccctccctgg 6568 Query: 183 cgctgacgaactcctcgccgtcgctgacgttctcctcgc 221 || ||||| |||||| ||||| | ||||| |||||||| Sbjct: 6567 tgccgacgagctcctcaccgtcaccgacgtcctcctcgc 6529 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 348 caacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcct 407 |||||||||||| || || ||||| |||||| || ||||| ||||||||||||| |||| Sbjct: 6393 caacccccacccgggcgccgatgtcgccctcagcctcgtccacgacgcctacgccatcct 6334 Query: 408 ctc 410 ||| Sbjct: 6333 ctc 6331
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 69.9 bits (35), Expect = 7e-09 Identities = 128/159 (80%) Strand = Plus / Plus Query: 63 cgggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcga 122 |||||||||||| |||||||| || ||||||| | || ||||||||||| ||| | || Sbjct: 22446129 cgggagggtgcaggcggagcggtgattggagatcgtggggaagctcctcgcggcgaggga 22446188 Query: 123 cctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccgg 182 |||| | |||||||| ||||| |||||||||||||||| ||| |||| ||| | || Sbjct: 22446189 gttcgtcaggtgcaagcggttcgcagagcgcgcggtggaggtggacccgcccctccctgg 22446248 Query: 183 cgctgacgaactcctcgccgtcgctgacgttctcctcgc 221 || ||||| |||||| ||||| | ||||| |||||||| Sbjct: 22446249 tgccgacgagctcctcaccgtcaccgacgtcctcctcgc 22446287 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 348 caacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcct 407 |||||||||||| || || ||||| |||||| || ||||| ||||||||||||| |||| Sbjct: 22446423 caacccccacccgggcgccgatgtcgccctcagcctcgtccacgacgcctacgccatcct 22446482 Query: 408 ctc 410 ||| Sbjct: 22446483 ctc 22446485
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 69.9 bits (35), Expect = 7e-09 Identities = 128/159 (80%) Strand = Plus / Plus Query: 63 cgggagggtgcaagcggagcgatggctggagattgcggcaaagctcctcgctgcgcgcga 122 |||||||||||| |||||||| || ||||||| | || ||||||||||| ||| | || Sbjct: 22756040 cgggagggtgcaggcggagcggtgattggagatcgtggggaagctcctcgcggcgaggga 22756099 Query: 123 cctcgttggctgcaagcgcttcgccgagcgcgcggtggaggcggatccgcttctctccgg 182 |||| | |||||||| ||||| |||||||||||||||| ||| |||| ||| | || Sbjct: 22756100 gttcgtcaggtgcaagcggttcgcagagcgcgcggtggaggtggacccgcccctccctgg 22756159 Query: 183 cgctgacgaactcctcgccgtcgctgacgttctcctcgc 221 || ||||| |||||| ||||| | ||||| |||||||| Sbjct: 22756160 tgccgacgagctcctcaccgtcaccgacgtcctcctcgc 22756198 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 348 caacccccaccccggtgcggatgtggccctccgcatcgtcaacgacgcctacgcactcct 407 |||||||||||| || || ||||| |||||| || ||||| ||||||||||||| |||| Sbjct: 22756334 caacccccacccgggcgccgatgtcgccctcagcctcgtccacgacgcctacgccatcct 22756393 Query: 408 ctc 410 ||| Sbjct: 22756394 ctc 22756396
>gb|AF325719.1|AF325719 Pennisetum ciliare calmodulin-like protein mRNA, complete cds Length = 965 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 137 agcgcttcgccgagcgcgcggtggagg 163 ||||| ||||||||||||||||||||| Sbjct: 359 agcgcgtcgccgagcgcgcggtggagg 333
>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0076E06, from chromosome 3, complete sequence Length = 126323 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 agcgcttcgccgagcgcgcggtggag 162 ||||| |||||||||||||||||||| Sbjct: 91445 agcgcgtcgccgagcgcgcggtggag 91470
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 193 ctcctcgccgtcgctgacgttctcctcgcc 222 |||||||||||||||| ||| ||||||||| Sbjct: 54620 ctcctcgccgtcgctgtcgtcctcctcgcc 54591
>dbj|AK109541.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A09, full insert sequence Length = 826 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 agcgcttcgccgagcgcgcggtggag 162 ||||| |||||||||||||||||||| Sbjct: 386 agcgcgtcgccgagcgcgcggtggag 361
>dbj|AK109470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E03, full insert sequence Length = 2176 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 agcgcttcgccgagcgcgcggtggag 162 ||||| |||||||||||||||||||| Sbjct: 386 agcgcgtcgccgagcgcgcggtggag 361
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 22399613 gccgcctcgccctcctcctccaatc 22399589
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 41473591 gccgcctcgccctcctcctccaatc 41473615 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 41442618 gccgcctcgccctcctcctccaatc 41442642 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 85 tggctggagattgcggcaaagctcctcgctgcgcgcgacctcgttggctgcaagcg 140 |||||||| ||||||| || |||||||| ||| | ||||| || ||||||||||| Sbjct: 29610334 tggctggatattgcggggaaactcctcgcggcgtgggaccttgtcggctgcaagcg 29610389 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ccgcctcgcgctcctcctcc 340 |||||||||||||||||||| Sbjct: 21639130 ccgcctcgcgctcctcctcc 21639111
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 134111 gccgcctcgccctcctcctccaatc 134135
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 29884 gccgcctcgccctcctcctccaatc 29908
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tcaggcgatgctctataccgg 245 ||||||||||||||||||||| Sbjct: 1058677 tcaggcgatgctctataccgg 1058657
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 caccgaccacggcgccatctc 308 ||||||||||||||||||||| Sbjct: 5891846 caccgaccacggcgccatctc 5891826
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 41790 gccgcctcgccctcctcctccaatc 41814 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 10817 gccgcctcgccctcctcctccaatc 10841
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 22327958 gccgcctcgccctcctcctccaatc 22327934
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 gccgcctcgcgctcctcctccaatc 344 |||||||||| |||||||||||||| Sbjct: 107921 gccgcctcgccctcctcctccaatc 107945
>ref|XM_480059.1| Oryza sativa (japonica cultivar-group), mRNA Length = 931 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tcgccgagcgcgcggtggag 162 |||||||||||||||||||| Sbjct: 374 tcgccgagcgcgcggtggag 355
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 agcgcttcgccgagcgcgcg 156 |||||||||||||||||||| Sbjct: 3096534 agcgcttcgccgagcgcgcg 3096553
>ref|NM_191723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 444 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 85 tggctggagattgcggcaaagctcctcgctgcgcgcgacctcgttggctgcaagcg 140 |||||||| ||||||| || |||||||| ||| | ||||| || ||||||||||| Sbjct: 67 tggctggatattgcggggaaactcctcgcggcgtgggaccttgtcggctgcaagcg 122
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 246 agagcctgatccgttcgccgtcctccag 273 |||||| |||||||||||| |||||||| Sbjct: 43424 agagccagatccgttcgccctcctccag 43451
>ref|XM_850103.1| PREDICTED: Canis familiaris hypothetical protein LOC612372 (LOC612372), mRNA Length = 939 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cgccgcctcgcgctcctcct 338 |||||||||||||||||||| Sbjct: 132 cgccgcctcgcgctcctcct 151
>emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261N11 on chromosome 20, complete sequence Length = 184223 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggctgtagtggggacggcgg 53 |||||||||||||||||||| Sbjct: 33937 ggctgtagtggggacggcgg 33956
>emb|AL133516.8| Human DNA sequence from clone RP4-553F17 on chromosome 1q42.11-42.3 Contains a CpG island, complete sequence Length = 93130 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gccgcctcgcgctcctcctc 339 |||||||||||||||||||| Sbjct: 59175 gccgcctcgcgctcctcctc 59194
>emb|AL022329.9|HS407F11 Human DNA sequence from clone CTA-407F11 on chromosome 22q12 Contains ADRBK2 gene for adrenergic beta receptor kinase 2, the YESP (v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1) pseudogene, ESTs, a ca repeat polymorphism, genomic marker D22S421, STSs, GSSs and two putative CpG Islands, complete sequence Length = 221507 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 ctccaatccagcaacccccacccc 360 ||||||||||||||||||| |||| Sbjct: 204008 ctccaatccagcaacccccgcccc 203985
>emb|AJ310932.1|HSA310932 Homo sapiens MYO18B gene for myosin heavy chain, exons 1-44 Length = 288888 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 ctccaatccagcaacccccacccc 360 ||||||||||||||||||| |||| Sbjct: 11114 ctccaatccagcaacccccgcccc 11091
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tcgccgagcgcgcggtggag 162 |||||||||||||||||||| Sbjct: 2489108 tcgccgagcgcgcggtggag 2489089
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 85 tggctggagattgcggcaaagctcctcgctgcgcgcgacctcgttggctgcaagcg 140 |||||||| ||||||| || |||||||| ||| | ||||| || ||||||||||| Sbjct: 80154 tggctggatattgcggggaaactcctcgcggcgtgggaccttgtcggctgcaagcg 80209
>dbj|AB088420.1| Pseudomonas resinovorans plasmid pCAR1, complete sequence Length = 199035 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cgccgcctcgcgctcctcct 338 |||||||||||||||||||| Sbjct: 152657 cgccgcctcgcgctcctcct 152676
>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697C12 Length = 149098 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ccgcctcgcgctcctcctcc 340 |||||||||||||||||||| Sbjct: 95683 ccgcctcgcgctcctcctcc 95664
>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0571B09 Length = 147382 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tcgccgagcgcgcggtggag 162 |||||||||||||||||||| Sbjct: 3465 tcgccgagcgcgcggtggag 3446
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cgccgcctcgcgctcctcct 338 |||||||||||||||||||| Sbjct: 37822 cgccgcctcgcgctcctcct 37803
>dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665F09 Length = 147102 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tcgccgagcgcgcggtggag 162 |||||||||||||||||||| Sbjct: 50737 tcgccgagcgcgcggtggag 50718
>emb|AJ336827.1|HSA336827 Homo sapiens genomic sequence surrounding NotI site, clone NB6-091R Length = 429 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ctcccgcgcctttcgccgcc 325 |||||||||||||||||||| Sbjct: 269 ctcccgcgcctttcgccgcc 250
>dbj|AK071435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J12, full insert sequence Length = 931 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tcgccgagcgcgcggtggag 162 |||||||||||||||||||| Sbjct: 374 tcgccgagcgcgcggtggag 355
>dbj|AK065173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C23, full insert sequence Length = 1682 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ccgcctcgcgctcctcctcc 340 |||||||||||||||||||| Sbjct: 41 ccgcctcgcgctcctcctcc 60
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgagcgcgcggtggaggcgg 166 |||||||||||||||||||| Sbjct: 2047438 cgagcgcgcggtggaggcgg 2047419
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gacgaactcctcgccgtcgc 206 |||||||||||||||||||| Sbjct: 111901 gacgaactcctcgccgtcgc 111882 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,614,905 Number of Sequences: 3902068 Number of extensions: 2614905 Number of successful extensions: 72950 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71603 Number of HSP's gapped (non-prelim): 1343 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
