>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1|
           precursor
          Length = 102

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 170 KCCNNCR-SFSGVDVCDDAHPQCPKGCSACRV---VTPSPHKTFRCADMKSTVDGTCGGP 337
           KCC NC  SFSG+  CDD    C   C  C V    + S +  FRC D   T  G CG  
Sbjct: 45  KCCTNCNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTD---TFLGMCGPK 101

Query: 338 C 340
           C
Sbjct: 102 C 102

>PRIA_RICCN (Q92HH1) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 648

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 92  WCSSWLPMNSLSAKLELYLCGXSGRMLSSC 3
           +CSSW+ ++  + KLE + CG   ++ SSC
Sbjct: 369 FCSSWMVVHKATKKLECHHCGYQSKIFSSC 398

>PRIA_RICPR (Q9ZD10) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 648

 Score = 33.1 bits (74), Expect = 0.63
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 92  WCSSWLPMNSLSAKLELYLCGXSGRMLSSC 3
           +CS+W+ ++  + KLE + CG   ++ SSC
Sbjct: 369 FCSAWMVLHKATKKLECHHCGYQSKIFSSC 398

>PRIA_RICTY (Q68WJ4) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 648

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 92  WCSSWLPMNSLSAKLELYLCGXSGRMLSSC 3
           +CS+W+ ++  +  LE + CG   ++ SSC
Sbjct: 369 FCSAWMVLHKATKTLECHHCGYQSKIFSSC 398

>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)|
          Length = 5045

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 327  QVPSTVLFMSAQRNVL*GL--GVTTRQAEQPLGHWGWASSQTST 202
            Q+P T +FMSA  N    L    TT   E P G+  W  +Q+ T
Sbjct: 1869 QIPQTSVFMSASNNSYRALLPSDTTESLETPDGYVSWVLAQSGT 1912

>IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [Contains:|
           Bowman-Birk type proteinase inhibitor A-I; Bowman-Birk
           type proteinase inhibitor B-I; Bowman-Birk type
           proteinase inhibitor B-III]
          Length = 70

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
 Frame = +2

Query: 173 CCNNCRSFSGVD-----VCDDAHPQCPKGCSACRVVTPSPHKTFRCAD 301
           CCN C            VC D    CP  C++C V T S     RC D
Sbjct: 11  CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSC-VCTRSNPPQCRCTD 57

>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)|
          Length = 347

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 383 VPPRIKLR*DEQSSCCYVCVWAVLYGQQYVRCLSSLC 493
           +PPR++   +EQ S C +C+  +   +   +C  S C
Sbjct: 149 LPPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFC 185

>ACOT3_MOUSE (Q9QYR7) Acyl-coenzyme A thioesterase 3 (EC 3.1.2.2) (Acyl-CoA|
           thioesterase 3) (Peroxisomal acyl-coenzyme A thioester
           hydrolase 2a) (Peroxisomal long-chain acyl-coA
           thioesterase 2) (PTE-Ia)
          Length = 432

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -2

Query: 576 FMFLMSR--HAQPSEVFIQQATPAFSRERKHSDDKQRTYCWPYSTAHTQT*QHDDCSSHL 403
           F+FL+ +  H   SE + ++A+    R + H  +K +  C+P +  H +      C + L
Sbjct: 329 FLFLVGQDDHNWKSEFYAREAS---KRLQAHGKEKPQIICYPETGHHIEPPYFPLCKASL 385

Query: 402 SFILGG 385
           + ++GG
Sbjct: 386 NSLVGG 391


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,223,443
Number of Sequences: 219361
Number of extensions: 1271258
Number of successful extensions: 3266
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3261
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)