ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basda23 |
|---|---|
| Clone Library Name | barley_pub |
>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)| Length = 249 Score = 135 bits (339), Expect = 6e-32 Identities = 64/70 (91%), Positives = 69/70 (98%) Frame = +1 Query: 1 ASGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIM 180 ++GSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVR+L+IM Sbjct: 173 STGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRILVIM 232 Query: 181 LKNAGDKSED 210 LKNA DKSE+ Sbjct: 233 LKNASDKSEE 242
>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)| Length = 247 Score = 111 bits (277), Expect = 9e-25 Identities = 52/65 (80%), Positives = 59/65 (90%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNA 192 F FE+YFGLLIF+GYMV DTQEIIE+AH GDMDY+KH+LTLFTDFVAV VR+LIIMLKN+ Sbjct: 176 FKFELYFGLLIFVGYMVVDTQEIIEKAHLGDMDYVKHSLTLFTDFVAVFVRILIIMLKNS 235 Query: 193 GDKSE 207 DK E Sbjct: 236 ADKEE 240
>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 68.2 bits (165), Expect = 9e-12 Identities = 29/66 (43%), Positives = 45/66 (68%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNA 192 F +Y GLL+ G++++DTQ IIE+A HGD DYI H + LF DFV + ++++I+ N Sbjct: 170 FQANLYMGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCIDLFLDFVTLFRKLMLILAFNE 229 Query: 193 GDKSED 210 DK ++ Sbjct: 230 KDKKKE 235
>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| (Transmembrane BAX inhibitor motif-containing protein 6) Length = 237 Score = 68.2 bits (165), Expect = 9e-12 Identities = 28/66 (42%), Positives = 45/66 (68%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNA 192 F +Y GL++ G++++DTQ IIE+A HGD DYI H + LF DF+ V ++++I+ N Sbjct: 170 FQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILAMNE 229 Query: 193 GDKSED 210 DK ++ Sbjct: 230 KDKKKE 235
>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 67.8 bits (164), Expect = 1e-11 Identities = 29/66 (43%), Positives = 45/66 (68%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNA 192 F +Y GLL+ G++++DTQ IIE+A HGD DYI H + LF DFV + ++++I+ N Sbjct: 170 FQANLYLGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCVDLFLDFVTLFRKLMLILAFNE 229 Query: 193 GDKSED 210 DK ++ Sbjct: 230 KDKKKE 235
>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 67.0 bits (162), Expect = 2e-11 Identities = 27/66 (40%), Positives = 45/66 (68%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNA 192 F +Y GL++ G++++DTQ IIE+A HGD DYI H + LF DF+ + ++++I+ N Sbjct: 170 FQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITLFRKLMMILAMNE 229 Query: 193 GDKSED 210 DK ++ Sbjct: 230 KDKKKE 235
>BI1_PIG (Q66RM2) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 64.7 bits (156), Expect = 1e-10 Identities = 27/66 (40%), Positives = 46/66 (69%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNA 192 F +Y GL++ G++++DTQ IIE+A +GD DYI H + LF+DFV + ++++I+ N Sbjct: 170 FQANLYVGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCVDLFSDFVTLFRKLMMILAMNE 229 Query: 193 GDKSED 210 DK ++ Sbjct: 230 KDKKKE 235
>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)| Length = 237 Score = 64.3 bits (155), Expect = 1e-10 Identities = 27/66 (40%), Positives = 45/66 (68%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNA 192 F +Y GLLI G+++ DTQ IIE+A +GD DY+ H++ LF DF+ + ++++I+ N Sbjct: 170 FKAHMYLGLLIMCGFVLXDTQLIIEKAENGDKDYVWHSVDLFLDFITIFRKLMVILALND 229 Query: 193 GDKSED 210 DK ++ Sbjct: 230 KDKKKE 235
>BI1_DROME (Q9VSH3) Probable Bax inhibitor 1 (BI-1)| Length = 245 Score = 54.3 bits (129), Expect = 1e-07 Identities = 22/63 (34%), Positives = 41/63 (65%) Frame = +1 Query: 22 EVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDK 201 ++Y G+ + ++VYDTQ I+E+ +G+ D ++HAL LF D +++ R+LII+ + K Sbjct: 176 QLYVGVFVMAAFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKEERK 235 Query: 202 SED 210 + Sbjct: 236 QNE 238
>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein homolog) Length = 311 Score = 33.9 bits (76), Expect = 0.18 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +1 Query: 16 MFEVYFGLLIFLGYMVYDTQEIIERAHH--GDMDYIKHALTLFTDFVAVLVRVLIIM 180 M G + F ++ YDTQ ++ H DYI AL ++TD + + VL +M Sbjct: 251 MLYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIFTFVLQLM 307
>TMBI4_MOUSE (Q9DA39) Transmembrane BAX inhibitor motif-containing protein 4| (Z-protein) Length = 238 Score = 32.3 bits (72), Expect = 0.53 Identities = 13/46 (28%), Positives = 28/46 (60%) Frame = +1 Query: 34 GLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVL 171 G L+F G+++YDT ++ R +Y+ A++L+ D + + + +L Sbjct: 186 GALLFCGFIIYDTHSLMHRL--SPEEYVIAAISLYMDIINLFLHLL 229
>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein) (Responsive to centrifugal force and shear stress gene 1 protein) Length = 309 Score = 32.3 bits (72), Expect = 0.53 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = +1 Query: 34 GLLIFLGYMVYDTQEIIERAHH--GDMDYIKHALTLFTDFVAVLVRVL 171 G + F ++ YDTQ ++ H DYI AL ++TD V + VL Sbjct: 255 GAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIVYIFTFVL 302
>TMBI4_HUMAN (Q9HC24) Transmembrane BAX inhibitor motif-containing protein 4| (Z-protein) (S1R protein) Length = 238 Score = 31.6 bits (70), Expect = 0.91 Identities = 12/46 (26%), Positives = 28/46 (60%) Frame = +1 Query: 34 GLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVL 171 G L+F G+++YDT ++ + +Y+ A++L+ D + + + +L Sbjct: 186 GALLFCGFIIYDTHSLMHKL--SPEEYVLAAISLYLDIINLFLHLL 229
>YBHL_ECOLI (P0AAC4) Inner membrane protein ybhL| Length = 234 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Frame = +1 Query: 28 YFGLLIFLGYMVYDTQEIIERAHHGDMD--------YIKHALTLFTDFVAVLVRVLII 177 Y G+++F+G YDTQ++ D I ALTL+ DF+ + + +L I Sbjct: 172 YIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRI 229
>YBHL_ECOL6 (P0AAC5) Inner membrane protein ybhL| Length = 234 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Frame = +1 Query: 28 YFGLLIFLGYMVYDTQEIIERAHHGDMD--------YIKHALTLFTDFVAVLVRVLII 177 Y G+++F+G YDTQ++ D I ALTL+ DF+ + + +L I Sbjct: 172 YIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRI 229
>CEMA_CHAGL (Q8M9X3) Chloroplast envelope membrane protein| Length = 472 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/45 (33%), Positives = 28/45 (62%) Frame = +1 Query: 49 LGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIML 183 LG +++ Q I+ A + + D I L LFTDF+A+ +++++L Sbjct: 327 LGALIH--QRTIQLAEYYNQDSINIILHLFTDFIAIFTLIVLLIL 369
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/37 (37%), Positives = 14/37 (37%) Frame = +3 Query: 69 HAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 179 H G H AP H H PH H P HHH Sbjct: 165 HLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 201 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/41 (34%), Positives = 14/41 (34%) Frame = +3 Query: 57 HGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 179 H H H AP H H PH H P HHH Sbjct: 181 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 221 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/41 (34%), Positives = 14/41 (34%) Frame = +3 Query: 57 HGVRHAGDHREGAPWRHGLHQARPHPLHRLCCRPRPSPHHH 179 H H H AP H H PH H P HHH Sbjct: 171 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 211 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%) Frame = +3 Query: 57 HGVRHAGDHREGAPWRHGLHQARPHPL---HRLCCRPRPSPHHH 179 H HA H H H A HP H L +PHHH Sbjct: 134 HHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHH 177
>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) Length = 269 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 105 HGLHQARPHPLHRLCCRPRPSPHHH 179 +GLH HP HR+ PSPHHH Sbjct: 18 NGLHH---HPAHRMGMGQFPSPHHH 39
>CITE2_HUMAN (Q99967) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) (P35srj) Length = 270 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 105 HGLHQARPHPLHRLCCRPRPSPHHH 179 +GLH HP HR+ PSPHHH Sbjct: 18 NGLHH---HPAHRMGMGQFPSPHHH 39
>Y819_CHLTR (O84826) Hypothetical protein CT_819| Length = 238 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAH----HGDMDY 114 ++ Y GL+IF+G V D Q I A HGD+ Y Sbjct: 169 YLLICYLGLIIFVGLTVVDAQSIRRVARSVGDHGDLSY 206
>Y206_CHLMU (Q9PLA1) Hypothetical protein TC0206| Length = 238 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = +1 Query: 13 FMFEVYFGLLIFLGYMVYDTQEIIERAH----HGDMDY 114 ++ Y GL+IF+G V D Q I A HGD+ Y Sbjct: 169 YLLICYLGLIIFVGLTVVDAQSIRRVARSVGDHGDLSY 206
>SYC1_STRCO (Q9L0Q6) Cysteinyl-tRNA synthetase 1 (EC 6.1.1.16) (Cysteine--tRNA| ligase 1) (CysRS 1) Length = 613 Score = 28.9 bits (63), Expect = 5.9 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +3 Query: 90 GAPWRHGLHQARPHPLHRLCCRPRPSPHHH 179 G P R + + PHP PRP P HH Sbjct: 6 GTPRRPAVRGSAPHPARGSAPGPRPMPTHH 35
>PYR1_HUMAN (P27708) CAD protein [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)] Length = 2225 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 8/33 (24%) Frame = -1 Query: 87 LDDLLRVVHH--------VPQEDQQAKVNLKHE 13 LDDLL+ +HH PQED +V+L+HE Sbjct: 1725 LDDLLQRLHHNPRRIFHLPPQEDTYVEVDLEHE 1757
>YCCA_ECOLI (P0AAC6) Inner membrane protein yccA| Length = 219 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = +1 Query: 37 LLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIM 180 +LI G ++++T II H G+ +YI+ ++L+ + V +L I+ Sbjct: 169 ILISSGAILFETSNII---HGGETNYIRATVSLYVSLYNIFVSLLSIL 213
>YCCA_ECOL6 (P0AAC7) Inner membrane protein yccA| Length = 219 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = +1 Query: 37 LLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIM 180 +LI G ++++T II H G+ +YI+ ++L+ + V +L I+ Sbjct: 169 ILISSGAILFETSNII---HGGETNYIRATVSLYVSLYNIFVSLLSIL 213
>PYR1_MESAU (P08955) CAD protein [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)] Length = 2225 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 8/33 (24%) Frame = -1 Query: 87 LDDLLRVVHHVP--------QEDQQAKVNLKHE 13 LDDLL+ +HH P QED +V+L+HE Sbjct: 1725 LDDLLQRLHHNPRRIFHLPLQEDTYVEVDLEHE 1757
>BAT5_MOUSE (Q9Z1Q2) Protein BAT5 (HLA-B-associated transcript 5)| Length = 557 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/37 (40%), Positives = 16/37 (43%) Frame = +3 Query: 33 WPVDLPGVHGVRHAGDHREGAPWRHGLHQARPHPLHR 143 WPVD G G P R G+ RP PLHR Sbjct: 155 WPVDFHWEEPSSRKGSR--GGPSRRGVALLRPEPLHR 189 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,457,626 Number of Sequences: 219361 Number of extensions: 683658 Number of successful extensions: 2074 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1962 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2066 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
