Clone Name | basda22 |
---|---|
Clone Library Name | barley_pub |
>TNR6B_HUMAN (O95407) Tumor necrosis factor receptor superfamily member 6B| precursor (Decoy receptor for Fas ligand) (Decoy receptor 3) (DcR3) (M68) Length = 300 Score = 31.2 bits (69), Expect = 2.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +2 Query: 32 CHPHPDCRSRVLRLKVPGEAPSPASIICSPCGGLP 136 C PH +C + L L VPG S +C+ C G P Sbjct: 168 CQPHRNCTALGLALNVPGS--SSHDTLCTSCTGFP 200
>EVI2B_HUMAN (P34910) EVI2B protein precursor (Ecotropic viral integration site| 2B protein) Length = 448 Score = 30.0 bits (66), Expect = 5.4 Identities = 10/18 (55%), Positives = 16/18 (88%) Frame = -1 Query: 472 GSVPSTAEEADMPPPPPL 419 G+ S++++AD+PPPPPL Sbjct: 327 GTAVSSSDDADLPPPPPL 344
>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)| Length = 1176 Score = 29.6 bits (65), Expect = 7.1 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 80 PGEAPSPASIICSPCGGLPSGAGQVWIRCPW 172 P + +PA+ S C PSG WI CP+ Sbjct: 1030 PTSSATPATTASSSCTTNPSGPASPWISCPF 1060
>GLSK_RAT (P13264) Glutaminase kidney isoform, mitochondrial precursor (EC| 3.5.1.2) (GLS) (L-glutamine amidohydrolase) (K-glutaminase) [Contains: Glutaminase kidney isoform 68 kDa chain; Glutaminase kidney isoform 65 kDa chain] Length = 674 Score = 25.4 bits (54), Expect(2) = 8.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -1 Query: 223 PWGGAGMKKKGPGS 182 PW G G + KGPGS Sbjct: 56 PWWGGGGRAKGPGS 69 Score = 22.3 bits (46), Expect(2) = 8.7 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -2 Query: 135 GRPPQGEQMMEAGLGASP 82 G PPQ +Q + GASP Sbjct: 87 GTPPQQQQQQQQQPGASP 104
>PECA1_RAT (Q3SWT0) Platelet endothelial cell adhesion molecule precursor| (PECAM-1) (CD31 antigen) Length = 678 Score = 29.3 bits (64), Expect = 9.3 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +2 Query: 29 SCHPHPDCRSRVLRLKV 79 +CH HP+ RS +LR+KV Sbjct: 469 NCHSHPEVRSEILRVKV 485
>KCNC3_MOUSE (Q63959) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 769 Score = 29.3 bits (64), Expect = 9.3 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 5/45 (11%) Frame = -2 Query: 198 RKAQGRRQSQGQRIHTCPAPEGRPP-----QGEQMMEAGLGASPG 79 R QG + Q Q + T PE PP Q +Q + G G SPG Sbjct: 11 RGCQGTGKQQPQPVPTPQPPESSPPPLPPPQQQQCSQPGTGPSPG 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,501,965 Number of Sequences: 219361 Number of extensions: 1334752 Number of successful extensions: 6099 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6058 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)