>RS15A_DAUCA (Q9AT34) 40S ribosomal protein S15a|
Length = 129
Score = 77.0 bits (188), Expect(3) = 3e-29
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQ+
Sbjct: 1 VRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQK 42
Score = 55.8 bits (133), Expect(3) = 3e-29
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYIGEF YVDDHRSGKIVVELNG+
Sbjct: 41 QKHGYIGEFEYVDDHRSGKIVVELNGR 67
Score = 33.5 bits (75), Expect(3) = 3e-29
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVISPRFDV
Sbjct: 67 RLNKCGVISPRFDV 80
>RS22_NEUCR (Q7RV75) 40S ribosomal protein S22|
Length = 130
Score = 65.5 bits (158), Expect(3) = 3e-23
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +3
Query: 102 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
MVR SVL+DAL S+ NAEK GKRQV+IRPSSKVIIKFL VMQ+
Sbjct: 1 MVRTSVLHDALNSINNAEKAGKRQVLIRPSSKVIIKFLQVMQK 43
Score = 51.2 bits (121), Expect(3) = 3e-23
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYIGEF VDDHRSGKIVV+LNG+
Sbjct: 42 QKHGYIGEFEEVDDHRSGKIVVQLNGR 68
Score = 29.6 bits (65), Expect(3) = 3e-23
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
R+NKCGVISPR++V
Sbjct: 68 RMNKCGVISPRYNV 81
>RS22_KLUMA (P33953) 40S ribosomal protein S22 (Ribosomal protein S15a)|
Length = 129
Score = 59.7 bits (143), Expect(3) = 4e-23
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 108 RVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQ+
Sbjct: 2 RTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQK 42
Score = 54.3 bits (129), Expect(3) = 4e-23
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYIGEF Y+DDHRSGKIVV+LNG+
Sbjct: 41 QKHGYIGEFEYIDDHRSGKIVVQLNGR 67
Score = 31.6 bits (70), Expect(3) = 4e-23
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVISPRF+V
Sbjct: 67 RLNKCGVISPRFNV 80
>RS22_KLULA (Q6CW21) 40S ribosomal protein S22|
Length = 129
Score = 59.7 bits (143), Expect(3) = 4e-23
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 108 RVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQ+
Sbjct: 2 RTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQK 42
Score = 54.3 bits (129), Expect(3) = 4e-23
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYIGEF Y+DDHRSGKIVV+LNG+
Sbjct: 41 QKHGYIGEFEYIDDHRSGKIVVQLNGR 67
Score = 31.6 bits (70), Expect(3) = 4e-23
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVISPRF+V
Sbjct: 67 RLNKCGVISPRFNV 80
>RS22_ASHGO (Q752J5) 40S ribosomal protein S22|
Length = 129
Score = 59.7 bits (143), Expect(3) = 6e-23
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 108 RVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQ+
Sbjct: 2 RTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQK 42
Score = 52.0 bits (123), Expect(3) = 6e-23
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYIGEF Y+DDHRSGKIVV+L G+
Sbjct: 41 QKHGYIGEFEYIDDHRSGKIVVQLTGR 67
Score = 33.5 bits (75), Expect(3) = 6e-23
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 299 TARLNKCGVISPRFDV 346
T RLNKCGVISPRF+V
Sbjct: 65 TGRLNKCGVISPRFNV 80
>RS22_CANAL (Q96W54) 40S ribosomal protein S22|
Length = 129
Score = 60.5 bits (145), Expect(3) = 7e-23
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 108 RVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQ+
Sbjct: 2 RTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLTVMQK 42
Score = 54.3 bits (129), Expect(3) = 7e-23
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYIGEF Y+DDHRSGKIVV+LNG+
Sbjct: 41 QKHGYIGEFEYIDDHRSGKIVVQLNGR 67
Score = 30.0 bits (66), Expect(3) = 7e-23
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVI PRF+V
Sbjct: 67 RLNKCGVIQPRFNV 80
>RS22A_YEAST (P0C0W1) 40S ribosomal protein S22-A (S24) (YS22) (RP50) (YP58)|
Length = 129
Score = 58.9 bits (141), Expect(3) = 7e-23
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 108 RVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQ+
Sbjct: 2 RSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQK 42
Score = 54.3 bits (129), Expect(3) = 7e-23
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYIGEF Y+DDHRSGKIVV+LNG+
Sbjct: 41 QKHGYIGEFEYIDDHRSGKIVVQLNGR 67
Score = 31.6 bits (70), Expect(3) = 7e-23
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVISPRF+V
Sbjct: 67 RLNKCGVISPRFNV 80
>RS22B_YEAST (Q3E7Y3) 40S ribosomal protein S22-B (S24) (YS22) (RP50) (YP58)|
Length = 129
Score = 58.2 bits (139), Expect(3) = 1e-22
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +3
Query: 108 RVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
R SVL DAL ++ NAEK GKRQV++RPSSKVIIKFL VMQ+
Sbjct: 2 RSSVLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQK 42
Score = 54.3 bits (129), Expect(3) = 1e-22
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYIGEF Y+DDHRSGKIVV+LNG+
Sbjct: 41 QKHGYIGEFEYIDDHRSGKIVVQLNGR 67
Score = 31.6 bits (70), Expect(3) = 1e-22
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVISPRF+V
Sbjct: 67 RLNKCGVISPRFNV 80
>RS15A_DROYA (Q6XIM8) 40S ribosomal protein S15a|
Length = 129
Score = 60.1 bits (144), Expect(3) = 2e-22
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VR++VL DALK + NAEKRGKRQV++RP SKVIIKFL VM +
Sbjct: 1 VRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMK 42
Score = 48.1 bits (113), Expect(3) = 2e-22
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF VDDHRSGKIVV L G+
Sbjct: 42 KHGYIGEFEIVDDHRSGKIVVNLTGR 67
Score = 35.4 bits (80), Expect(3) = 2e-22
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 299 TARLNKCGVISPRFDV 346
T RLNKCGVISPRFDV
Sbjct: 65 TGRLNKCGVISPRFDV 80
>RS15A_DROME (P48149) 40S ribosomal protein S15Aa|
Length = 129
Score = 60.1 bits (144), Expect(3) = 2e-22
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VR++VL DALK + NAEKRGKRQV++RP SKVIIKFL VM +
Sbjct: 1 VRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMK 42
Score = 48.1 bits (113), Expect(3) = 2e-22
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF VDDHRSGKIVV L G+
Sbjct: 42 KHGYIGEFEIVDDHRSGKIVVNLTGR 67
Score = 35.4 bits (80), Expect(3) = 2e-22
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 299 TARLNKCGVISPRFDV 346
T RLNKCGVISPRFDV
Sbjct: 65 TGRLNKCGVISPRFDV 80
>RS15A_RAT (P62246) 40S ribosomal protein S15a|
Length = 129
Score = 61.2 bits (147), Expect(3) = 2e-22
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VR++VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM +
Sbjct: 1 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMK 42
Score = 46.6 bits (109), Expect(3) = 2e-22
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF +DDHR+GKIVV L G+
Sbjct: 42 KHGYIGEFEIIDDHRAGKIVVNLTGR 67
Score = 35.4 bits (80), Expect(3) = 2e-22
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 299 TARLNKCGVISPRFDV 346
T RLNKCGVISPRFDV
Sbjct: 65 TGRLNKCGVISPRFDV 80
>RS15A_MOUSE (P62245) 40S ribosomal protein S15a|
Length = 129
Score = 61.2 bits (147), Expect(3) = 2e-22
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VR++VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM +
Sbjct: 1 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMK 42
Score = 46.6 bits (109), Expect(3) = 2e-22
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF +DDHR+GKIVV L G+
Sbjct: 42 KHGYIGEFEIIDDHRAGKIVVNLTGR 67
Score = 35.4 bits (80), Expect(3) = 2e-22
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 299 TARLNKCGVISPRFDV 346
T RLNKCGVISPRFDV
Sbjct: 65 TGRLNKCGVISPRFDV 80
>RS15A_HUMAN (P62244) 40S ribosomal protein S15a|
Length = 129
Score = 61.2 bits (147), Expect(3) = 2e-22
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VR++VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM +
Sbjct: 1 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMK 42
Score = 46.6 bits (109), Expect(3) = 2e-22
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF +DDHR+GKIVV L G+
Sbjct: 42 KHGYIGEFEIIDDHRAGKIVVNLTGR 67
Score = 35.4 bits (80), Expect(3) = 2e-22
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 299 TARLNKCGVISPRFDV 346
T RLNKCGVISPRFDV
Sbjct: 65 TGRLNKCGVISPRFDV 80
>RS22_CANGA (Q6FMW9) 40S ribosomal protein S22|
Length = 129
Score = 58.5 bits (140), Expect(3) = 2e-22
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 108 RVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQ 227
R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQ
Sbjct: 2 RSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQ 41
Score = 53.1 bits (126), Expect(3) = 2e-22
Identities = 21/27 (77%), Positives = 26/27 (96%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
++HGYIGEF Y+DDHRSGKIVV+LNG+
Sbjct: 41 QRHGYIGEFEYIDDHRSGKIVVQLNGR 67
Score = 31.6 bits (70), Expect(3) = 2e-22
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVISPRF+V
Sbjct: 67 RLNKCGVISPRFNV 80
>RS22_SCHPO (O14469) 40S ribosomal protein S22|
Length = 130
Score = 61.6 bits (148), Expect(3) = 1e-21
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +3
Query: 102 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
MVR SVL D L ++ NAE+RG+RQV+IRPSSKVI+KFL VMQ+
Sbjct: 1 MVRQSVLADCLNNIVNAERRGRRQVLIRPSSKVIVKFLTVMQK 43
Score = 48.1 bits (113), Expect(3) = 1e-21
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+KHGYI EF +DDHRSGKIV++LNG+
Sbjct: 42 QKHGYIDEFTEIDDHRSGKIVIQLNGR 68
Score = 30.8 bits (68), Expect(3) = 1e-21
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
R+NKCGVISPRF+V
Sbjct: 68 RINKCGVISPRFNV 81
>RS15B_DROME (Q7KR04) 40S ribosomal protein S15Ab|
Length = 129
Score = 60.1 bits (144), Expect(3) = 3e-21
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VR++VL DALK + NAEKRGKRQV++RP SKVIIKFL VM +
Sbjct: 1 VRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMK 42
Score = 45.4 bits (106), Expect(3) = 3e-21
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF V+DHR+GKIVV L G+
Sbjct: 42 KHGYIGEFEIVEDHRAGKIVVNLTGR 67
Score = 33.9 bits (76), Expect(3) = 3e-21
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 299 TARLNKCGVISPRFD 343
T RLNKCGVISPRFD
Sbjct: 65 TGRLNKCGVISPRFD 79
>RS15A_ICTPU (Q90YQ8) 40S ribosomal protein S15a|
Length = 129
Score = 57.0 bits (136), Expect(3) = 4e-21
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VR++VL DALK + NAEKRGK QV+IRP SKVI++FL VM +
Sbjct: 1 VRMNVLADALKCINNAEKRGKAQVLIRPCSKVIVRFLTVMMK 42
Score = 46.6 bits (109), Expect(3) = 4e-21
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF +DDHR+GKIVV L G+
Sbjct: 42 KHGYIGEFEIIDDHRAGKIVVNLTGR 67
Score = 35.4 bits (80), Expect(3) = 4e-21
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 299 TARLNKCGVISPRFDV 346
T RLNKCGVISPRFDV
Sbjct: 65 TGRLNKCGVISPRFDV 80
>RS15A_STRPU (P33095) 40S ribosomal protein S15a (Ribosomal protein S24)|
Length = 129
Score = 56.6 bits (135), Expect(3) = 5e-21
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
VR++VL DAL+S+ NAEKR KRQV+IRP SKV +KFL+VM +
Sbjct: 1 VRMNVLADALRSICNAEKRCKRQVLIRPCSKVTVKFLMVMMK 42
Score = 48.5 bits (114), Expect(3) = 5e-21
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF VDDHR GKI+V LNG+
Sbjct: 42 KHGYIGEFEIVDDHRGGKIIVNLNGR 67
Score = 33.5 bits (75), Expect(3) = 5e-21
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVISPRFDV
Sbjct: 67 RLNKCGVISPRFDV 80
>RS15A_DICDI (P46793) 40S ribosomal protein S15a (Ribosomal protein S24)|
Length = 129
Score = 63.2 bits (152), Expect(3) = 2e-20
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQEAR 236
VR+SVLND L S+ NAE++GKRQV++RPSSKVI+KFL VM + R
Sbjct: 1 VRISVLNDCLYSIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKR 44
Score = 40.8 bits (94), Expect(3) = 2e-20
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
K YIGEF VDDHRSGKIV++L G+
Sbjct: 42 KKRYIGEFEIVDDHRSGKIVIDLIGR 67
Score = 32.7 bits (73), Expect(3) = 2e-20
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
R+NKCGVISPRFDV
Sbjct: 67 RINKCGVISPRFDV 80
>RS15A_PARLI (P50891) 40S ribosomal protein S15a (Ribosomal protein S24)|
Length = 129
Score = 51.6 bits (122), Expect(3) = 1e-19
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +3
Query: 105 VRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVM 224
VR++VL AL+ + NAEKR KRQV+IRP SKV IKFL+VM
Sbjct: 1 VRMNVLAAALRCICNAEKRCKRQVLIRPCSKVTIKFLMVM 40
Score = 48.5 bits (114), Expect(3) = 1e-19
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1
Query: 229 KHGYIGEFXYVDDHRSGKIVVELNGK 306
KHGYIGEF VDDHR GKI+V LNG+
Sbjct: 42 KHGYIGEFEVVDDHRGGKIIVNLNGR 67
Score = 33.5 bits (75), Expect(3) = 1e-19
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
RLNKCGVISPRFDV
Sbjct: 67 RLNKCGVISPRFDV 80
>RS8_SULAC (O05636) 30S ribosomal protein S8P|
Length = 133
Score = 42.4 bits (98), Expect(3) = 1e-11
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+K GYIGEF Y+DD R+GKI+V+L G+
Sbjct: 42 QKEGYIGEFEYIDDGRAGKIIVQLLGR 68
Score = 38.5 bits (88), Expect(3) = 1e-11
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 102 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
M ++ L +AL ++YN E R +Q +I P+SK+II L VMQ+
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQK 43
Score = 25.4 bits (54), Expect(3) = 1e-11
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 305 RLNKCGVISPRF 340
R+NKCG ISPR+
Sbjct: 68 RINKCGPISPRY 79
>RS8_SULTO (Q975J5) 30S ribosomal protein S8P|
Length = 133
Score = 42.4 bits (98), Expect(3) = 3e-11
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+K GYIGEF ++DD RSGKIVV+L G+
Sbjct: 42 QKEGYIGEFEFIDDGRSGKIVVQLLGR 68
Score = 38.1 bits (87), Expect(3) = 3e-11
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 102 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
MV ++ L +AL ++YN E R +Q +I P+SK+II L MQ+
Sbjct: 1 MVNLNPLANALTTIYNNEMRRNKQAIIMPASKLIINVLRAMQK 43
Score = 24.3 bits (51), Expect(3) = 3e-11
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 305 RLNKCGVISPRF 340
R+NKCG I+PR+
Sbjct: 68 RINKCGPIAPRY 79
>RS8_SULSO (Q9UX92) 30S ribosomal protein S8P|
Length = 133
Score = 40.4 bits (93), Expect(3) = 6e-11
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 102 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQ+
Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQK 43
Score = 39.7 bits (91), Expect(3) = 6e-11
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGKTEQ 315
+K GY+GEF Y+DD R GKI V+L G+ +
Sbjct: 42 QKEGYVGEFEYIDDGRWGKITVQLLGRVNK 71
Score = 23.9 bits (50), Expect(3) = 6e-11
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 305 RLNKCGVISPRF 340
R+NKCG I+PR+
Sbjct: 68 RVNKCGPITPRY 79
>RS8_METKA (Q8TW15) 30S ribosomal protein S8P|
Length = 130
Score = 36.6 bits (83), Expect(3) = 9e-08
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNGK 306
+++GYIG F ++DD RSGK +V+L G+
Sbjct: 42 QEYGYIGSFEFIDDGRSGKFLVKLVGR 68
Score = 32.7 bits (73), Expect(3) = 9e-08
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 102 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
M + L DA+ ++ N E G ++ +I P+SK+I + L VMQE
Sbjct: 1 MTLMDPLADAMATIKNNEMVGNKECVIEPASKLIGRVLKVMQE 43
Score = 23.5 bits (49), Expect(3) = 9e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
R+N CGVI PR V
Sbjct: 68 RINDCGVIKPRHPV 81
>RS8_METJA (P54041) 30S ribosomal protein S8P|
Length = 130
Score = 33.5 bits (75), Expect(3) = 1e-07
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 120 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
L +AL + N E+ GK+ V I+P+SK+I + L VMQ+
Sbjct: 7 LANALNHISNCERVGKKVVYIKPASKLIGRVLKVMQD 43
Score = 33.1 bits (74), Expect(3) = 1e-07
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 232 HGYIGEFXYVDDHRSGKIVVELNGK 306
+GYIGEF +++D R+G VEL GK
Sbjct: 44 NGYIGEFEFIEDGRAGIFKVELIGK 68
Score = 25.8 bits (55), Expect(3) = 1e-07
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
++NKCG I PRF V
Sbjct: 68 KINKCGAIKPRFPV 81
>RS8_METIG (Q977V0) 30S ribosomal protein S8P|
Length = 130
Score = 35.8 bits (81), Expect(3) = 2e-07
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 232 HGYIGEFXYVDDHRSGKIVVELNGK 306
HGYIGEF +++D R+G VEL GK
Sbjct: 44 HGYIGEFEFIEDGRAGIFKVELIGK 68
Score = 32.0 bits (71), Expect(3) = 2e-07
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 120 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
L +AL + N E+ GK+ I+P+SK+I + L VMQ+
Sbjct: 7 LANALNHLTNCERVGKKVFYIKPASKLIGRVLKVMQD 43
Score = 24.3 bits (51), Expect(3) = 2e-07
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
++NKCG I PR+ V
Sbjct: 68 KINKCGAIKPRYAV 81
>RS8_ARCFU (O28369) 30S ribosomal protein S8P|
Length = 131
Score = 37.4 bits (85), Expect(3) = 7e-07
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 226 KKHGYIGEFXYVDDHRSGKIVVELNG 303
K +GYI F YV++HR GK +VEL+G
Sbjct: 43 KDYGYIKGFEYVENHRGGKFIVELSG 68
Score = 30.8 bits (68), Expect(3) = 7e-07
Identities = 15/43 (34%), Positives = 30/43 (69%)
Frame = +3
Query: 102 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
++ V L++A+ ++ NAE G+++ I+P+SK+I L VM++
Sbjct: 2 VMSVDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKD 44
Score = 21.6 bits (44), Expect(3) = 7e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 299 TARLNKCGVISPRF 340
+ +N CG I PRF
Sbjct: 67 SGNINDCGAIRPRF 80
>RS8_METTL (Q977U8) 30S ribosomal protein S8P|
Length = 130
Score = 33.5 bits (75), Expect(3) = 9e-06
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 232 HGYIGEFXYVDDHRSGKIVVELNGK 306
HGYIG F Y++D R+G VEL G+
Sbjct: 44 HGYIGNFEYIEDGRAGIYKVELIGQ 68
Score = 28.9 bits (63), Expect(3) = 9e-06
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 120 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
L +AL + N E GK ++P+SK+I + L VMQ+
Sbjct: 7 LANALNHISNCEGVGKSVAYVKPASKLIGRVLNVMQD 43
Score = 23.5 bits (49), Expect(3) = 9e-06
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
++NKCG + PR+ V
Sbjct: 68 QINKCGAVKPRYAV 81
>RS8_METMP (Q6LXD8) 30S ribosomal protein S8P|
Length = 130
Score = 29.6 bits (65), Expect(3) = 1e-04
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 120 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
L +AL + N E GK ++P+SK+I + L VMQ+
Sbjct: 7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQD 43
Score = 28.5 bits (62), Expect(3) = 1e-04
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 235 GYIGEFXYVDDHRSGKIVVELNGK 306
GYIG F Y++D ++G V+L G+
Sbjct: 45 GYIGNFEYIEDGKAGVYKVDLIGQ 68
Score = 23.5 bits (49), Expect(3) = 1e-04
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
++NKCG + PR+ V
Sbjct: 68 QINKCGAVKPRYAV 81
>RS8_METVA (P14038) 30S ribosomal protein S8P|
Length = 130
Score = 28.9 bits (63), Expect(3) = 2e-04
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 120 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQE 230
L +AL + N E GK ++P+SK+I + L VMQ+
Sbjct: 7 LANALNHVSNCEGVGKNVAYLKPASKLIGRVLKVMQD 43
Score = 28.5 bits (62), Expect(3) = 2e-04
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 235 GYIGEFXYVDDHRSGKIVVELNGK 306
GYIG F Y++D ++G V+L G+
Sbjct: 45 GYIGNFEYIEDGKAGVYKVDLIGQ 68
Score = 23.5 bits (49), Expect(3) = 2e-04
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 305 RLNKCGVISPRFDV 346
++NKCG + PR+ V
Sbjct: 68 QINKCGAVKPRYAV 81
>NEIL1_MOUSE (Q8K4Q6) Endonuclease VIII-like 1 (EC 3.2.2.-) (EC 4.2.99.18)|
(Nei-like 1) (DNA glycosylase/AP lyase Neil1)
(DNA-(apurinic or apyrimidinic site) lyase Neil1) (NEH1)
Length = 388
Score = 27.3 bits (59), Expect = 9.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 385 QPAGPIPRISLTPNIKAGTDDSTLVQSCRSTPQQSCQICG 266
Q P P ++L+ IKA + L++ C P++ Q+ G
Sbjct: 201 QQCRPSPELTLSQKIKAKLQNPDLLELCHLVPKEVVQLGG 240
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,710,936
Number of Sequences: 219361
Number of extensions: 738040
Number of successful extensions: 2459
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 2341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2446
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)