ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basda16 |
|---|---|
| Clone Library Name | barley_pub |
>RRP3_HORVU (O48609) Plastid-specific 30S ribosomal protein 3, chloroplast| precursor (PSRP-3) Length = 181 Score = 220 bits (560), Expect = 3e-57 Identities = 114/174 (65%), Positives = 114/174 (65%) Frame = +2 Query: 44 MLPMSVHPATTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTXXXXXXXVE 223 MLPMSVHPATTPA T VE Sbjct: 1 MLPMSVHPATTPALASRPRVSLPRPSTPSSSSSLVHLKSRRPPLRSLRSLTAAAAAAAVE 60 Query: 224 AGEPYFXXXXXXXXXXXXXXXXVVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMV 403 AGEPYF VVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMV Sbjct: 61 AGEPYFGLGDDEPLGGEGDAEAVVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMV 120 Query: 404 PGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQ 565 PGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQ Sbjct: 121 PGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQ 174
>RRP3_SPIOL (P82412) Plastid-specific 30S ribosomal protein 3, chloroplast| precursor (PSRP-3) Length = 179 Score = 147 bits (372), Expect = 2e-35 Identities = 69/92 (75%), Positives = 76/92 (82%) Frame = +2 Query: 290 VVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEE 469 +V E+ KV V P LVLKFIWMEKNIG+ALDQ +PG G++PLSPYYFWPRKDAWEE Sbjct: 81 LVNKEKLKVLVKPMDKPRLVLKFIWMEKNIGLALDQTIPGHGTVPLSPYYFWPRKDAWEE 140 Query: 470 LRAKLEEKEWISQKQMIILLNQATDIINLWQQ 565 L+ LE K WISQKQMIILLNQATDIINLWQQ Sbjct: 141 LKVLLENKPWISQKQMIILLNQATDIINLWQQ 172
>RRP31_ARATH (Q9SX22) Plastid-specific 30S ribosomal protein 3-1, chloroplast| precursor (PSRP-3 1) Length = 166 Score = 135 bits (339), Expect = 1e-31 Identities = 63/85 (74%), Positives = 74/85 (87%) Frame = +2 Query: 311 KVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEE 490 KV P+++ +VLKF+WMEKNIG+ LDQ VPG G+IPLSPY+FWPRKDAWEEL++ LE Sbjct: 75 KVVKPDEKS-RVVLKFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKSTLEA 133 Query: 491 KEWISQKQMIILLNQATDIINLWQQ 565 K WISQK+MIILLNQATDIINLWQQ Sbjct: 134 KPWISQKKMIILLNQATDIINLWQQ 158
>RRP32_ARATH (Q9LFV0) Plastid-specific 30S ribosomal protein 3-2, chloroplast| precursor (PSRP-3 2) Length = 183 Score = 129 bits (323), Expect = 9e-30 Identities = 56/87 (64%), Positives = 70/87 (80%) Frame = +2 Query: 302 EEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAK 481 ++ +V V + P +VLKF+WM+K+IG+ALD M+PG G+IPLSPYYFWPRKDAWEEL+ Sbjct: 90 KKMRVLVKPLEKPKVVLKFVWMQKDIGVALDHMIPGFGTIPLSPYYFWPRKDAWEELKTL 149 Query: 482 LEEKEWISQKQMIILLNQATDIINLWQ 562 LE K WIS+ + LLNQATDIINLWQ Sbjct: 150 LESKPWISELHRVFLLNQATDIINLWQ 176
>RRP3_PORPU (P51351) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 99 Score = 95.9 bits (237), Expect = 8e-20 Identities = 41/72 (56%), Positives = 57/72 (79%) Frame = +2 Query: 350 LKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILL 529 LK +W+E NI IA+DQ+V G G+ PL+ Y+FWPR DAWEEL+A+LE K WI+++ I LL Sbjct: 6 LKVLWLENNIAIAIDQIV-GNGTSPLTSYFFWPRNDAWEELKAELESKPWIAERDRIELL 64 Query: 530 NQATDIINLWQQ 565 N+ T++IN WQ+ Sbjct: 65 NKTTEVINYWQE 76
>RRP3_MESVI (Q9MUN2) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 123 Score = 95.1 bits (235), Expect = 1e-19 Identities = 41/73 (56%), Positives = 54/73 (73%) Frame = +2 Query: 347 VLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIIL 526 VLKF+W+EKN+ + +DQ V G+ P++ Y+FWPRKDAWEEL+ L K WIS + I L Sbjct: 22 VLKFLWLEKNLAVTVDQ-VTNRGNSPITEYFFWPRKDAWEELKDALANKPWISYDESIAL 80 Query: 527 LNQATDIINLWQQ 565 LNQ TD+IN WQ+ Sbjct: 81 LNQTTDVINYWQE 93
>RRP3_PROMP (Q7V048) Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein)| Length = 126 Score = 94.7 bits (234), Expect = 2e-19 Identities = 37/81 (45%), Positives = 60/81 (74%) Frame = +2 Query: 323 PEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWI 502 P+ + ++K +W+ N+ +A+DQ+V G GS PL+ YYFWPR DAWE+L+++LE K WI Sbjct: 24 PKPDEGRFIIKILWLPDNVALAVDQIVGG-GSSPLTAYYFWPRDDAWEKLKSELENKSWI 82 Query: 503 SQKQMIILLNQATDIINLWQQ 565 + + + +LN+AT++IN WQ+ Sbjct: 83 TDNERVEILNKATEVINYWQE 103
>RRP3_ANASP (Q8YSC1) Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein)| Length = 99 Score = 94.0 bits (232), Expect = 3e-19 Identities = 38/73 (52%), Positives = 57/73 (78%) Frame = +2 Query: 347 VLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIIL 526 +LK +W+++N+ +A+DQ+V G G+ PL+ Y+FWPR DAWEEL+ +LE K WIS + L Sbjct: 5 ILKILWLDENVALAVDQVV-GKGTSPLTKYFFWPRNDAWEELKKELESKHWISDLDRVEL 63 Query: 527 LNQATDIINLWQQ 565 LN+AT++IN WQ+ Sbjct: 64 LNKATEVINYWQE 76
>RRP3_GUITH (O78422) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 99 Score = 93.6 bits (231), Expect = 4e-19 Identities = 37/76 (48%), Positives = 58/76 (76%) Frame = +2 Query: 338 PMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQM 517 P LK +W++ N+ +A+DQ++ G G+ PL+ Y+FWPR DAWE+++A+LE K WI +K+ Sbjct: 2 PKFTLKVLWLDNNVAVAVDQII-GNGTSPLTCYFFWPRNDAWEQVKAELESKPWIEEKER 60 Query: 518 IILLNQATDIINLWQQ 565 I LLN+ T++IN WQ+ Sbjct: 61 IELLNKTTELINCWQE 76
>RRP3_SYNEL (P59327) Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein)| Length = 108 Score = 93.2 bits (230), Expect = 5e-19 Identities = 40/72 (55%), Positives = 59/72 (81%) Frame = +2 Query: 350 LKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILL 529 L+ +W+EK++ IA+DQ+V G G+ PL+ Y+FWPR DAWE L+A+LE+K WI++ + I LL Sbjct: 15 LRVLWLEKDVAIAVDQIV-GKGTSPLTSYFFWPRTDAWELLKAELEKKSWITEAERIELL 73 Query: 530 NQATDIINLWQQ 565 N+AT+IIN WQ+ Sbjct: 74 NRATEIINYWQE 85
>RRP3_SYNP7 (O05161) Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein)| Length = 112 Score = 92.4 bits (228), Expect = 9e-19 Identities = 37/72 (51%), Positives = 56/72 (77%) Frame = +2 Query: 350 LKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILL 529 +K +W+ +N+ IA+DQ+V G + PL+ YYFWPR DAWE+L+ +LE K WI++ + + LL Sbjct: 19 IKILWLNENVAIAVDQVV-GKATSPLTAYYFWPRHDAWEQLKTELESKSWITEAERVELL 77 Query: 530 NQATDIINLWQQ 565 NQAT++IN WQ+ Sbjct: 78 NQATEVINYWQE 89
>RRP3_PROMA (Q7VA74) Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein)| Length = 126 Score = 91.7 bits (226), Expect = 2e-18 Identities = 36/81 (44%), Positives = 60/81 (74%) Frame = +2 Query: 323 PEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWI 502 P+ + +LK +W+ N+ +A+DQ+V G G+ PL+ Y+FWPR+DAWE L+ +LE+K WI Sbjct: 24 PKADEGRFLLKILWLPDNVALAVDQIVGG-GTSPLTAYFFWPREDAWETLKTELEDKAWI 82 Query: 503 SQKQMIILLNQATDIINLWQQ 565 + + + +LN+AT++IN WQ+ Sbjct: 83 TDNERVEVLNKATEVINYWQE 103
>RRP3_SYNY3 (Q55385) Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein)| Length = 112 Score = 91.3 bits (225), Expect = 2e-18 Identities = 37/72 (51%), Positives = 57/72 (79%) Frame = +2 Query: 347 VLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIIL 526 +LK +W+++N+ IA+DQ+V G G+ PL+ Y+FWPR DAW++L+ +LE K WI++ I + Sbjct: 15 ILKVLWLDQNVAIAVDQIV-GKGTSPLTSYFFWPRADAWQQLKDELEAKHWIAEADRINV 73 Query: 527 LNQATDIINLWQ 562 LNQAT++IN WQ Sbjct: 74 LNQATEVINFWQ 85
>RRP3_EUGST (Q9BAC0) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 101 Score = 91.3 bits (225), Expect = 2e-18 Identities = 35/73 (47%), Positives = 57/73 (78%) Frame = +2 Query: 347 VLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIIL 526 +LKF+W+EK++ + LDQ + G + P++ ++FWP+ DAWEE++ LE+K WI Q +++IL Sbjct: 5 ILKFLWLEKSVAVGLDQKI-GDRTTPVTEFFFWPQHDAWEEMKNFLEDKSWIDQSEVVIL 63 Query: 527 LNQATDIINLWQQ 565 LNQ T++IN WQ+ Sbjct: 64 LNQITEVINYWQE 76
>RRP3_PROMM (Q7V5U0) Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein)| Length = 126 Score = 89.7 bits (221), Expect = 6e-18 Identities = 36/81 (44%), Positives = 58/81 (71%) Frame = +2 Query: 323 PEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWI 502 P+ + +LK +W+ N+ +A+DQ+V G G PL+ Y+FWPR+DAWE L+ +LE K WI Sbjct: 24 PKADEGRFLLKILWLPDNVALAVDQIVGG-GPSPLTAYFFWPREDAWETLKGELEGKSWI 82 Query: 503 SQKQMIILLNQATDIINLWQQ 565 + + + +LN+AT++IN WQ+ Sbjct: 83 TDNERVEVLNKATEVINYWQE 103
>RRP3_EUGGA (Q9BAC5) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 103 Score = 89.0 bits (219), Expect = 1e-17 Identities = 37/74 (50%), Positives = 54/74 (72%) Frame = +2 Query: 344 LVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMII 523 L+LKF+W+EK+I + LDQ V G PL+ ++FWP+KDAWEE++ LE + WI+Q + Sbjct: 5 LILKFLWLEKSIAVCLDQKV-GDSITPLTEFFFWPQKDAWEEMKNFLESQSWITQSDSVN 63 Query: 524 LLNQATDIINLWQQ 565 LLN T++IN WQ+ Sbjct: 64 LLNNITEVINFWQE 77
>RRP3_EUGVI (Q9BAB9) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 101 Score = 88.2 bits (217), Expect = 2e-17 Identities = 37/73 (50%), Positives = 55/73 (75%) Frame = +2 Query: 347 VLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIIL 526 VLKF+W+++++ ++LDQ + G PL+ +YFWP+ DAWEE+R LE K WI+ + I+L Sbjct: 5 VLKFLWLQRSVAVSLDQKI-GDNVSPLTEFYFWPQCDAWEEMRNFLESKSWINSSESILL 63 Query: 527 LNQATDIINLWQQ 565 LNQ T+IIN WQ+ Sbjct: 64 LNQVTEIINDWQE 76
>RRP3_GRATL (Q6B913) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 99 Score = 86.3 bits (212), Expect = 6e-17 Identities = 36/71 (50%), Positives = 51/71 (71%) Frame = +2 Query: 353 KFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLN 532 K +W+E NI IA+D + G PL+ Y+FWPR DAWEEL+ +LE K WI++ + + LLN Sbjct: 7 KILWLENNIAIAIDYNI-GNNKSPLTSYFFWPRNDAWEELKIELESKPWINKNEKVDLLN 65 Query: 533 QATDIINLWQQ 565 + T+IIN WQ+ Sbjct: 66 KTTEIINFWQE 76
>RRP3_EUGMU (Q9BAC3) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 101 Score = 75.5 bits (184), Expect = 1e-13 Identities = 28/73 (38%), Positives = 50/73 (68%) Frame = +2 Query: 347 VLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIIL 526 VLKF+ ++K I + LDQ + PL+ Y+FWP++DAWE+++ ++ +WI K + + Sbjct: 5 VLKFLLIDKVIAVCLDQKISNERLNPLTEYFFWPQRDAWEDMKNFIDNNDWIDPKDAVNI 64 Query: 527 LNQATDIINLWQQ 565 LN+ T++IN W++ Sbjct: 65 LNRITEVINFWEE 77
>RRP3_CYACA (Q9TLZ0) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 101 Score = 75.1 bits (183), Expect = 1e-13 Identities = 30/72 (41%), Positives = 50/72 (69%) Frame = +2 Query: 350 LKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILL 529 +K +W+ NI IA+D+++ G P++ YYFWPR DAWE+L+ +L+ + + K +++L Sbjct: 6 IKVLWLRNNIAIAVDRLI-GDSLFPMTYYYFWPRTDAWEQLKIELDSQPGLFAKDKVVIL 64 Query: 530 NQATDIINLWQQ 565 NQ T II+ WQ+ Sbjct: 65 NQVTRIIDYWQE 76
>RRP3_EUGMY (Q9BAC2) Probable plastid-specific 30S ribosomal protein 3 (PSRP-3)| Length = 101 Score = 70.5 bits (171), Expect = 4e-12 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 4/75 (5%) Frame = +2 Query: 353 KFIW----MEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMI 520 KF+W +E I I LDQ + S P++ Y+FWP+ DAW+EL LE K WI+ I Sbjct: 3 KFVWKVVCLENKIAICLDQQLADKTS-PVTEYFFWPQSDAWDELNKLLESKPWITLSNRI 61 Query: 521 ILLNQATDIINLWQQ 565 +LN TD+IN W + Sbjct: 62 FVLNILTDLINYWDE 76
>EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)| Length = 267 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/54 (27%), Positives = 21/54 (38%) Frame = +1 Query: 31 PELHHAPDVRPPRYYAGPRVAAPRLPAQTFHTLLLFQPRPPQEQEATPSLAPQP 192 P H P PP Y P+ P+ T+ P+PP + P+ P P Sbjct: 170 PPTHPTPKPTPPTYTPSPKPPTPKPTPPTYTP----SPKPPTPKPTPPTYTPSP 219
>QUEA_VIBPA (Q87S37) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 350 Score = 31.6 bits (70), Expect = 1.9 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = +2 Query: 290 VVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEE 469 V E++EY E+ + D + LKF N + ++ +G +PL PY P +DA +E Sbjct: 109 VGENDEYSAEMVARHDALFELKF-----NSDKTVLDILEEIGHMPLPPYIDRPDEDADKE 163
>PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7.11.1)| Length = 543 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +1 Query: 31 PELHHAPDVRPPRYYAGPRVAAPRLPAQTFHTLLLFQPRPPQEQEATPSLAP 186 P+ + P + P+ YA P P+ P + +PRPP+++ A P P Sbjct: 438 PQRYATPQPQQPQRYAPPPAPEPQQPRR--------EPRPPRQRSANPMRIP 481
>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog| Length = 328 Score = 30.8 bits (68), Expect = 3.2 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 16/61 (26%) Frame = +1 Query: 58 RPPRYYAGPRVAAP-----------RLPAQTFHTLLLFQP-----RPPQEQEATPSLAPQ 189 +PP A PR AAP + P Q QP +PPQ+Q A PS APQ Sbjct: 93 QPPYASAQPRPAAPPQPQAPMQQPVQQPVQPAPQPQQVQPSAPPVQPPQQQPAPPSQAPQ 152 Query: 190 P 192 P Sbjct: 153 P 153
>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog| Length = 328 Score = 30.8 bits (68), Expect = 3.2 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 16/61 (26%) Frame = +1 Query: 58 RPPRYYAGPRVAAP-----------RLPAQTFHTLLLFQP-----RPPQEQEATPSLAPQ 189 +PP A PR AAP + P Q QP +PPQ+Q A PS APQ Sbjct: 93 QPPYASAQPRPAAPPQPQAPMQQPVQQPVQPAPQPQQVQPSAPPVQPPQQQPAPPSQAPQ 152 Query: 190 P 192 P Sbjct: 153 P 153
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/54 (29%), Positives = 23/54 (42%) Frame = +1 Query: 31 PELHHAPDVRPPRYYAGPRVAAPRLPAQTFHTLLLFQPRPPQEQEATPSLAPQP 192 P + P PP Y P +P P+ ++ P PPQ Q P+ +P P Sbjct: 459 PPAYAQPPPPPPTYSPPPPAYSPPPPSP------IYSPPPPQVQPLPPTFSPPP 506
>QUEA_VIBF1 (Q5E3D1) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 350 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/58 (31%), Positives = 34/58 (58%) Frame = +2 Query: 296 ESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEE 469 E++E++ E+ + D + ++F +K + I LD+ +G +PL PY P +DA +E Sbjct: 111 ENQEHEAEMVARHDTLFEIRFTSDKKVLDI-LDE----IGHMPLPPYIDRPDEDADKE 163
>TAL_HAEIN (P45055) Transaldolase (EC 2.2.1.2)| Length = 316 Score = 30.0 bits (66), Expect = 5.5 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = +2 Query: 290 VVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPGV 412 +V EYK EV K P+ +F W + +A++++ G+ Sbjct: 258 LVRKLEYKGEVKAKPQPLTEAEFYWQHNSDAMAVEKLAEGI 298
>TAL_HAEI8 (Q4QLG9) Transaldolase (EC 2.2.1.2)| Length = 317 Score = 29.6 bits (65), Expect = 7.2 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +2 Query: 290 VVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPGV 412 ++ EYK EV K P+ +F W + +A++++ G+ Sbjct: 259 LIRKLEYKGEVKAKPQPLTEAEFYWQHNSDAMAVEKLAEGI 299
>QUEA_PHOPR (Q6LU70) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 351 Score = 29.3 bits (64), Expect = 9.4 Identities = 16/58 (27%), Positives = 32/58 (55%) Frame = +2 Query: 296 ESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMVPGVGSIPLSPYYFWPRKDAWEE 469 E+++Y+ E+ + D + ++F N + +++ VG +PL PY P +DA +E Sbjct: 111 ENDDYQAEMIARHDTLFEIRF-----NSDKTVLEILEEVGHMPLPPYIDRPDEDADKE 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,490,560 Number of Sequences: 219361 Number of extensions: 1083791 Number of successful extensions: 3766 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3706 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
