ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basda16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ222779.1|HVJ222779 Hordeum vulgare mRNA for hypothetical p... 775 0.0
2ref|XM_472755.1| Oryza sativa (japonica cultivar-group), predic... 270 5e-69
3dbj|AK068022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 5e-69
4gb|AY106548.1| Zea mays PCO085040 mRNA sequence 270 5e-69
5emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4,... 264 3e-67
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
7dbj|AK058660.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 2e-65
8gb|AY086145.1| Arabidopsis thaliana clone 21798 mRNA, complete s... 78 4e-11
9gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 50 0.009
10gb|AF239218.1| Spinacia oleracea plastid-specific ribosomal prot... 48 0.034
11ref|XM_751585.1| Ustilago maydis 521 hypothetical protein (UM005... 44 0.53
12ref|NM_017105.1| Rattus norvegicus bone morphogenetic protein 3 ... 44 0.53
13dbj|D63860.1|RATPBMP3 Rattus norvegicus mRNA for prepro bone mor... 44 0.53
14ref|NM_024475.3| Mus musculus ubiquitin-like domain containing C... 42 2.1
15gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, c... 42 2.1
16ref|XR_001770.1| PREDICTED: Mus musculus similar to ubiquitin-li... 42 2.1
17gb|BC083331.1| Mus musculus ubiquitin-like domain containing CTD... 42 2.1
18gb|BC085111.1| Mus musculus ubiquitin-like domain containing CTD... 42 2.1
19gb|BC056652.1| Mus musculus ubiquitin-like domain containing CTD... 42 2.1
20gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 2.1
21emb|BX255277.5| Mouse DNA sequence from clone RP23-478B14 on chr... 42 2.1
22emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 42 2.1
23gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, comple... 42 2.1
24dbj|AK153998.1| Mus musculus 2 days neonate thymus thymic cells ... 42 2.1
25dbj|AK147744.1| Mus musculus melanocyte cDNA, RIKEN full-length ... 42 2.1
26dbj|AK050031.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 42 2.1
27dbj|AK043952.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 42 2.1
28dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.1
29gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, comple... 42 2.1
30gb|BC106093.1| Mus musculus ubiquitin-like domain containing CTD... 42 2.1
31emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chr... 42 2.1
32ref|NM_121581.2| Arabidopsis thaliana structural constituent of ... 40 8.3
33gb|AC102923.10| Mus musculus chromosome 1, clone RP24-262J2, com... 40 8.3
34ref|XM_589072.2| PREDICTED: Bos taurus similar to myosin, heavy ... 40 8.3
35gb|BC065536.1| Homo sapiens dystonin, mRNA (cDNA clone IMAGE:600... 40 8.3
36ref|XM_954375.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.3
37ref|XM_331121.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.3
38ref|XM_748213.1| Aspergillus fumigatus Af293 U1 small nuclear ri... 40 8.3
39ref|XM_387487.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 8.3
40ref|XM_386388.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 8.3
41gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome... 40 8.3
42gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome... 40 8.3
43emb|AL096710.8|HSDJ61B2 Human DNA sequence from clone RP1-61B2 o... 40 8.3
44emb|X60113.1|DGADHDUP D.guanche Adh and Adh-dup genes for alcoho... 40 8.3
45emb|X60112.1|DMADHDUP D.madeirensis Adh and Adh-dup genes for al... 40 8.3
46emb|X58279.1|TAHSP173 T.aestivum mRNA for heat shock protein 17.3 40 8.3
47emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BA... 40 8.3
48emb|CR352305.6| Zebrafish DNA sequence from clone CH211-95N4 in ... 40 8.3
49emb|X55391.1|DSADH812 D.subobscura DNA for Adh retrosequence 812 40 8.3
50emb|X55390.1|DSADH135 D.pseudobscura DNA for Adh retrosequence 135 40 8.3
51dbj|AK123594.1| Homo sapiens cDNA FLJ41600 fis, clone CTONG2026920 40 8.3
52emb|BX119916.10| Zebrafish DNA sequence from clone CH211-202I5 i... 40 8.3
53gb|AY874376.1| Drosophila subobscura CG9010/ADH fusion (Adh-Twai... 40 8.3
54gb|AY874375.1| Drosophila subobscura strain line 36 alcohol dehy... 40 8.3
55gb|AY874374.1| Drosophila subobscura strain line 35 alcohol dehy... 40 8.3
56gb|AY874373.1| Drosophila subobscura strain line 33 alcohol dehy... 40 8.3
57gb|AY874372.1| Drosophila subobscura strain line 26 alcohol dehy... 40 8.3
58gb|AY874371.1| Drosophila subobscura strain line 24 alcohol dehy... 40 8.3
59gb|AY874370.1| Drosophila subobscura strain line 22 alcohol dehy... 40 8.3
60gb|AY874369.1| Drosophila subobscura strain line 21 alcohol dehy... 40 8.3
61gb|AY874368.1| Drosophila subobscura strain line 16 alcohol dehy... 40 8.3
62gb|AY874367.1| Drosophila subobscura strain line 11 alcohol dehy... 40 8.3
63gb|AY874366.1| Drosophila subobscura strain line 10 alcohol dehy... 40 8.3
64gb|AY874365.1| Drosophila subobscura strain line 7 alcohol dehyd... 40 8.3
65gb|AY874364.1| Drosophila subobscura strain line 6 alcohol dehyd... 40 8.3
66gb|AY874363.1| Drosophila subobscura strain line 3a alcohol dehy... 40 8.3
67gb|AY874362.1| Drosophila subobscura strain line 1 alcohol dehyd... 40 8.3
68gb|AY874361.1| Drosophila subobscura strain line 0 alcohol dehyd... 40 8.3
69gb|AY874360.1| Drosophila guanche CG9010/ADH fusion (Adh-Twain) ... 40 8.3
70dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
71dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
72gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, comp... 40 8.3
73dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
74gb|BT003711.1| Arabidopsis thaliana At5g15760 mRNA, complete cds 40 8.3
75gb|AC007238.3| Homo sapiens BAC clone RP11-19M18 from 2, complet... 40 8.3
76gb|AC067937.1|AC067937 Neurospora crassa chromosome 7, clone X11... 40 8.3
77emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clon... 40 8.3
78dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
79dbj|AK117858.1| Arabidopsis thaliana At5g15760 mRNA for putative... 40 8.3
80dbj|AK121373.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
81emb|CR388132.9| Zebrafish DNA sequence from clone DKEY-23A23 in ... 40 8.3
82gb|U68472.1|DMU68472 Drosophila madeirensis alcohol dehydrogenas... 40 8.3
83gb|U68471.1|DMU68471 Drosophila madeirensis alcohol dehydrogenas... 40 8.3
84gb|U68470.1|DGU68470 Drosophila guanche alcohol dehydrogenase (A... 40 8.3
85gb|U68469.1|DGU68469 Drosophila guanche alcohol dehydrogenase (A... 40 8.3
86emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in... 40 8.3
87gb|U88068.1|OSU88068 Oryza sativa sec14 like protein mRNA, compl... 40 8.3
88emb|AL928628.9| Zebrafish DNA sequence from clone DKEY-5G18 in l... 40 8.3
89emb|AL591469.9| Mouse DNA sequence from clone RP23-390D17 on chr... 40 8.3
90gb|M55545.1|DROADHBB Drosophila subobscura alchohol dehydrogenas... 40 8.3
91dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3 
>emb|AJ222779.1|HVJ222779 Hordeum vulgare mRNA for hypothetical protein (ORF1), clone RG49
          Length = 765

 Score =  775 bits (391), Expect = 0.0
 Identities = 391/391 (100%)
 Strand = Plus / Plus

                                                                       
Query: 219 tcgaagcgggggagccatacttcggtttgggggacgacgagccacttggcggagaaggag 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tcgaagcgggggagccatacttcggtttgggggacgacgagccacttggcggagaaggag 255

                                                                       
Query: 279 acgcggaagccgtggtcgaaagcgaggagtacaaggtggaggtgcctgaaaagcaggacc 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acgcggaagccgtggtcgaaagcgaggagtacaaggtggaggtgcctgaaaagcaggacc 315

                                                                       
Query: 339 cgatgctggtactgaagttcatatggatggagaagaacattggcatagcgcttgaccaga 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cgatgctggtactgaagttcatatggatggagaagaacattggcatagcgcttgaccaga 375

                                                                       
Query: 399 tggttccgggtgttggtagcatccccttaagcccctactacttctggccgcggaaagatg 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tggttccgggtgttggtagcatccccttaagcccctactacttctggccgcggaaagatg 435

                                                                       
Query: 459 catgggaggaactgagagcgaaactcgaggagaaagagtggatctcgcagaagcagatga 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 catgggaggaactgagagcgaaactcgaggagaaagagtggatctcgcagaagcagatga 495

                                                                       
Query: 519 tcatccttctcaaccaggccacggacatcatcaacctctggcagcaaggcggcggcagct 578
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tcatccttctcaaccaggccacggacatcatcaacctctggcagcaaggcggcggcagct 555

                                          
Query: 579 tgtcgacatgaggggctctatcttctcccaa 609
           |||||||||||||||||||||||||||||||
Sbjct: 556 tgtcgacatgaggggctctatcttctcccaa 586



 Score =  339 bits (171), Expect = 6e-90
 Identities = 171/171 (100%)
 Strand = Plus / Plus

                                                                       
Query: 24  ctcttatccggaactacaccatgctcccgatgtccgtccaccccgctactacgccggccc 83
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctcttatccggaactacaccatgctcccgatgtccgtccaccccgctactacgccggccc 60

                                                                       
Query: 84  tcgcgtcgcggccccgcgtctccctgcccagaccttccacaccctcctcctcttccagcc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcgcgtcgcggccccgcgtctccctgcccagaccttccacaccctcctcctcttccagcc 120

                                                              
Query: 144 tcgtccacctcaagagcaggaggccaccccttcgctcgctccgcagcctca 194
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgtccacctcaagagcaggaggccaccccttcgctcgctccgcagcctca 171
to top
>ref|XM_472755.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 552

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                       
Query: 303 aggagtacaaggtggaggtgcctgaaaagcaggacccgatgctggtactgaagttcatat 362
           |||||||||||||  |||||||||||| |||||| || ||||| || |||||||||||||
Sbjct: 266 aggagtacaaggttaaggtgcctgaaaggcaggatccaatgcttgttctgaagttcatat 325

                                                                       
Query: 363 ggatggagaagaacattggcatagcgcttgaccagatggttccgggtgttggtagcatcc 422
           ||||||||||||||||||||||||| || |||||| ||||||| ||   ||| ||||| |
Sbjct: 326 ggatggagaagaacattggcatagccctcgaccagttggttcccggctatggcagcattc 385

                                                                       
Query: 423 ccttaagcccctactacttctggccgcggaaagatgcatgggaggaactgagagcgaaac 482
           | |||||||| |||||||||||||| ||||||||||| |||||||| || ||||| || |
Sbjct: 386 cgttaagcccatactacttctggccacggaaagatgcctgggaggagctaagagcaaagc 445

                                                                       
Query: 483 tcgaggagaaagagtggatctcgcagaagcagatgatcatccttctcaaccaggccacgg 542
           | |||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| |
Sbjct: 446 tggaggagaaagagtggatctctcagaaacagatgatcatccttctgaatcaggccactg 505

                                                   
Query: 543 acatcatcaacctctggcagcaaggcggcggcagcttgtc 582
           | ||||||||||| ||||| || || || |||||||||||
Sbjct: 506 atatcatcaacctttggcaacagggtggtggcagcttgtc 545



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 51  cgatgtccgtccaccccgctactacgccggccctcgcgtcgcggccccgcgtctccctgc 110
           |||||||||||||||||||  | |||||||||||||| |||||  ||||| |||||| ||
Sbjct: 8   cgatgtccgtccaccccgccgccacgccggccctcgcctcgcgcgcccgcatctcccggc 67

              
Query: 111 cca 113
           |||
Sbjct: 68  cca 70



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 141 gcctcgtccacctcaagagcaggaggccaccccttcgctcgctccg 186
           ||||||||||||||   ||||||||||  |||||||||||||||||
Sbjct: 119 gcctcgtccacctcggcagcaggaggcttccccttcgctcgctccg 164
to top
>dbj|AK068022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130N24, full
           insert sequence
          Length = 805

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                       
Query: 303 aggagtacaaggtggaggtgcctgaaaagcaggacccgatgctggtactgaagttcatat 362
           |||||||||||||  |||||||||||| |||||| || ||||| || |||||||||||||
Sbjct: 303 aggagtacaaggttaaggtgcctgaaaggcaggatccaatgcttgttctgaagttcatat 362

                                                                       
Query: 363 ggatggagaagaacattggcatagcgcttgaccagatggttccgggtgttggtagcatcc 422
           ||||||||||||||||||||||||| || |||||| ||||||| ||   ||| ||||| |
Sbjct: 363 ggatggagaagaacattggcatagccctcgaccagttggttcccggctatggcagcattc 422

                                                                       
Query: 423 ccttaagcccctactacttctggccgcggaaagatgcatgggaggaactgagagcgaaac 482
           | |||||||| |||||||||||||| ||||||||||| |||||||| || ||||| || |
Sbjct: 423 cgttaagcccatactacttctggccacggaaagatgcctgggaggagctaagagcaaagc 482

                                                                       
Query: 483 tcgaggagaaagagtggatctcgcagaagcagatgatcatccttctcaaccaggccacgg 542
           | |||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| |
Sbjct: 483 tggaggagaaagagtggatctctcagaaacagatgatcatccttctgaatcaggccactg 542

                                                   
Query: 543 acatcatcaacctctggcagcaaggcggcggcagcttgtc 582
           | ||||||||||| ||||| || || || |||||||||||
Sbjct: 543 atatcatcaacctttggcaacagggtggtggcagcttgtc 582



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 51  cgatgtccgtccaccccgctactacgccggccctcgcgtcgcggccccgcgtctccctgc 110
           |||||||||||||||||||  | |||||||||||||| |||||  ||||| |||||| ||
Sbjct: 45  cgatgtccgtccaccccgccgccacgccggccctcgcctcgcgcgcccgcatctcccggc 104

              
Query: 111 cca 113
           |||
Sbjct: 105 cca 107



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 141 gcctcgtccacctcaagagcaggaggccaccccttcgctcgctccg 186
           ||||||||||||||   ||||||||||  |||||||||||||||||
Sbjct: 156 gcctcgtccacctcggcagcaggaggcttccccttcgctcgctccg 201
to top
>gb|AY106548.1| Zea mays PCO085040 mRNA sequence
          Length = 666

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                       
Query: 311 aaggtggaggtgcctgaaaagcaggacccgatgctggtactgaagttcatatggatggag 370
           ||||||| |||||| || |  |||||||||||||||||||| |||||||| |||||||||
Sbjct: 336 aaggtggtggtgcccgagagacaggacccgatgctggtactcaagttcatctggatggag 395

                                                                       
Query: 371 aagaacattggcatagcgcttgaccagatggttccgggtgttggtagcatccccttaagc 430
           |||||||| |||||||| || |||||| ||||||| ||   ||| |||||||| || |||
Sbjct: 396 aagaacatcggcatagcactcgaccagctggttcctggctatggcagcatcccgttgagc 455

                                                                       
Query: 431 ccctactacttctggccgcggaaagatgcatgggaggaactgagagcgaaactcgaggag 490
           || |||||||||||||||||||| || || |||||||| || ||||| ||  | || |||
Sbjct: 456 ccgtactacttctggccgcggaaggacgcgtgggaggagcttagagccaagttggaagag 515

                                                                       
Query: 491 aaagagtggatctcgcagaagcagatgatcatccttctcaaccaggccacggacatcatc 550
           |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 516 aaagagtggatctcgcagaagcagatgatcatccttctcaaccaggccaccgatatcatc 575

                                                   
Query: 551 aacctctggcagcaaggcggcggcagcttgtcgacatgag 590
           |||||||||||||| || ||||| | | ||||||||||||
Sbjct: 576 aacctctggcagcagggtggcgggaacctgtcgacatgag 615



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 39  acaccatgctcccgatgtccgtccaccccgctactacgccggcc 82
           ||||||||||||| ||| ||||||||||| | || |||||||||
Sbjct: 76  acaccatgctcccaatggccgtccaccccaccaccacgccggcc 119
to top
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16,
             complete sequence
          Length = 176383

 Score =  264 bits (133), Expect = 3e-67
 Identities = 241/277 (87%)
 Strand = Plus / Plus

                                                                         
Query: 306   agtacaaggtggaggtgcctgaaaagcaggacccgatgctggtactgaagttcatatgga 365
             ||||||||||  |||||||||||| |||||| || ||||| || ||||||||||||||||
Sbjct: 97619 agtacaaggttaaggtgcctgaaaggcaggatccaatgcttgttctgaagttcatatgga 97678

                                                                         
Query: 366   tggagaagaacattggcatagcgcttgaccagatggttccgggtgttggtagcatcccct 425
             |||||||||||||||||||||| || |||||| ||||||| ||   ||| ||||| || |
Sbjct: 97679 tggagaagaacattggcatagccctcgaccagttggttcccggctatggcagcattccgt 97738

                                                                         
Query: 426   taagcccctactacttctggccgcggaaagatgcatgggaggaactgagagcgaaactcg 485
             ||||||| |||||||||||||| ||||||||||| |||||||| || ||||| || || |
Sbjct: 97739 taagcccatactacttctggccacggaaagatgcctgggaggagctaagagcaaagctgg 97798

                                                                         
Query: 486   aggagaaagagtggatctcgcagaagcagatgatcatccttctcaaccaggccacggaca 545
             ||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| || |
Sbjct: 97799 aggagaaagagtggatctctcagaaacagatgatcatccttctgaatcaggccactgata 97858

                                                  
Query: 546   tcatcaacctctggcagcaaggcggcggcagcttgtc 582
             |||||||||| ||||| || || || |||||||||||
Sbjct: 97859 tcatcaacctttggcaacagggtggtggcagcttgtc 97895



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                         
Query: 51    cgatgtccgtccaccccgctactacgccggccctcgcgtcgcggccccgcgtctccctgc 110
             |||||||||||||||||||  | |||||||||||||| |||||  ||||| |||||| ||
Sbjct: 96514 cgatgtccgtccaccccgccgccacgccggccctcgcctcgcgcgcccgcatctcccggc 96573

                
Query: 111   cca 113
             |||
Sbjct: 96574 cca 96576



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 141   gcctcgtccacctcaagagcaggaggccaccccttcgctcgctccg 186
             ||||||||||||||   ||||||||||  |||||||||||||||||
Sbjct: 96625 gcctcgtccacctcggcagcaggaggcttccccttcgctcgctccg 96670
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  264 bits (133), Expect = 3e-67
 Identities = 241/277 (87%)
 Strand = Plus / Plus

                                                                            
Query: 306      agtacaaggtggaggtgcctgaaaagcaggacccgatgctggtactgaagttcatatgga 365
                ||||||||||  |||||||||||| |||||| || ||||| || ||||||||||||||||
Sbjct: 23003163 agtacaaggttaaggtgcctgaaaggcaggatccaatgcttgttctgaagttcatatgga 23003222

                                                                            
Query: 366      tggagaagaacattggcatagcgcttgaccagatggttccgggtgttggtagcatcccct 425
                |||||||||||||||||||||| || |||||| ||||||| ||   ||| ||||| || |
Sbjct: 23003223 tggagaagaacattggcatagccctcgaccagttggttcccggctatggcagcattccgt 23003282

                                                                            
Query: 426      taagcccctactacttctggccgcggaaagatgcatgggaggaactgagagcgaaactcg 485
                ||||||| |||||||||||||| ||||||||||| |||||||| || ||||| || || |
Sbjct: 23003283 taagcccatactacttctggccacggaaagatgcctgggaggagctaagagcaaagctgg 23003342

                                                                            
Query: 486      aggagaaagagtggatctcgcagaagcagatgatcatccttctcaaccaggccacggaca 545
                ||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| || |
Sbjct: 23003343 aggagaaagagtggatctctcagaaacagatgatcatccttctgaatcaggccactgata 23003402

                                                     
Query: 546      tcatcaacctctggcagcaaggcggcggcagcttgtc 582
                |||||||||| ||||| || || || |||||||||||
Sbjct: 23003403 tcatcaacctttggcaacagggtggtggcagcttgtc 23003439



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                            
Query: 51       cgatgtccgtccaccccgctactacgccggccctcgcgtcgcggccccgcgtctccctgc 110
                |||||||||||||||||||  | |||||||||||||| |||||  ||||| |||||| ||
Sbjct: 23002058 cgatgtccgtccaccccgccgccacgccggccctcgcctcgcgcgcccgcatctcccggc 23002117

                   
Query: 111      cca 113
                |||
Sbjct: 23002118 cca 23002120



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 141      gcctcgtccacctcaagagcaggaggccaccccttcgctcgctccg 186
                ||||||||||||||   ||||||||||  |||||||||||||||||
Sbjct: 23002169 gcctcgtccacctcggcagcaggaggcttccccttcgctcgctccg 23002214
to top
>dbj|AK058660.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G01, full
           insert sequence
          Length = 435

 Score =  258 bits (130), Expect = 2e-65
 Identities = 238/274 (86%)
 Strand = Plus / Plus

                                                                       
Query: 309 acaaggtggaggtgcctgaaaagcaggacccgatgctggtactgaagttcatatggatgg 368
           |||||||  |||||||||||| |||||| || ||||| || |||||||||||||||||||
Sbjct: 1   acaaggttaaggtgcctgaaaggcaggatccaatgcttgttctgaagttcatatggatgg 60

                                                                       
Query: 369 agaagaacattggcatagcgcttgaccagatggttccgggtgttggtagcatccccttaa 428
           ||||||||||||||||||| || |||||| ||||||| ||   ||| ||||| || ||||
Sbjct: 61  agaagaacattggcatagccctcgaccagttggttcccggctatggcagcattccgttaa 120

                                                                       
Query: 429 gcccctactacttctggccgcggaaagatgcatgggaggaactgagagcgaaactcgagg 488
           |||| |||||||||||||| ||||||||||| |||||||| || ||||| || || ||||
Sbjct: 121 gcccatactacttctggccacggaaagatgcctgggaggagctaagagcaaagctggagg 180

                                                                       
Query: 489 agaaagagtggatctcgcagaagcagatgatcatccttctcaaccaggccacggacatca 548
           |||||||||||||||| ||||| ||||||||||||||||| || |||||||| || ||||
Sbjct: 181 agaaagagtggatctctcagaaacagatgatcatccttctgaatcaggccactgatatca 240

                                             
Query: 549 tcaacctctggcagcaaggcggcggcagcttgtc 582
           ||||||| ||||| || || || |||||||||||
Sbjct: 241 tcaacctttggcaacagggtggtggcagcttgtc 274
to top
>gb|AY086145.1| Arabidopsis thaliana clone 21798 mRNA, complete sequence
          Length = 747

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                       
Query: 497 tggatctcgcagaagcagatgatcatccttctcaaccaggccacggacatcatcaacctc 556
           |||||||| |||||| |||||||||| ||||| ||||| ||||| ||||||||||| |||
Sbjct: 464 tggatctctcagaagaagatgatcattcttcttaaccaagccactgacatcatcaatctc 523

                              
Query: 557 tggcagcaaggcggcggca 575
           ||||| ||| | |||||||
Sbjct: 524 tggcaacaaagtggcggca 542
to top
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 522   tccttctcaaccaggccacggacatcatcaacctctggcag 562
             |||| ||||||||||| || || ||||||||||||||||||
Sbjct: 46968 tcctcctcaaccaggctaccgaaatcatcaacctctggcag 47008



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 434   tactacttctggccgcggaaagatgcatggga 465
             ||||||||||||||| |||||||||| |||||
Sbjct: 46880 tactacttctggccgaggaaagatgcttggga 46911
to top
>gb|AF239218.1| Spinacia oleracea plastid-specific ribosomal protein 3 precursor
           (Psrp-3) mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 752

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 351 tgaagttcatatggatggagaagaacat 378
           |||||||||||||||||||||| |||||
Sbjct: 342 tgaagttcatatggatggagaaaaacat 369
to top
>ref|XM_751585.1| Ustilago maydis 521 hypothetical protein (UM00531.1) partial mRNA
          Length = 2487

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 133  ctcttccagcctcgtccacctc 154
            ||||||||||||||||||||||
Sbjct: 1321 ctcttccagcctcgtccacctc 1300
to top
>ref|NM_017105.1| Rattus norvegicus bone morphogenetic protein 3 (Bmp3), mRNA
          Length = 2158

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 76  gccggccctcgcgtcgcggccccgcg 101
           |||| |||||||||||||||||||||
Sbjct: 445 gccgaccctcgcgtcgcggccccgcg 470
to top
>dbj|D63860.1|RATPBMP3 Rattus norvegicus mRNA for prepro bone morphogenetic protein-3
          Length = 2158

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 76  gccggccctcgcgtcgcggccccgcg 101
           |||| |||||||||||||||||||||
Sbjct: 445 gccgaccctcgcgtcgcggccccgcg 470
to top
>ref|NM_024475.3| Mus musculus ubiquitin-like domain containing CTD phosphatase 1
           (Ublcp1), mRNA
          Length = 2055

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 435 aggagtacaaggtggaggtgc 455
to top
>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence
          Length = 222382

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 387  cgcttgaccagatggttccgg 407
            |||||||||||||||||||||
Sbjct: 8872 cgcttgaccagatggttccgg 8852
to top
>ref|XR_001770.1| PREDICTED: Mus musculus similar to ubiquitin-like domain containing
           CTD phosphatase 1 (LOC665689), mRNA
          Length = 2073

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 452 aggagtacaaggtggaggtgc 472
to top
>gb|BC083331.1| Mus musculus ubiquitin-like domain containing CTD phosphatase 1,
           mRNA (cDNA clone IMAGE:6413630), partial cds
          Length = 1818

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 193 aggagtacaaggtggaggtgc 213
to top
>gb|BC085111.1| Mus musculus ubiquitin-like domain containing CTD phosphatase 1,
           mRNA (cDNA clone MGC:103277 IMAGE:30735741), complete
           cds
          Length = 2055

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 435 aggagtacaaggtggaggtgc 455
to top
>gb|BC056652.1| Mus musculus ubiquitin-like domain containing CTD phosphatase 1,
           mRNA (cDNA clone IMAGE:5038067), partial cds
          Length = 1653

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 33  aggagtacaaggtggaggtgc 53
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 564    aaggcggcggcagcttgtcga 584
              |||||||||||||||||||||
Sbjct: 294725 aaggcggcggcagcttgtcga 294705
to top
>emb|BX255277.5| Mouse DNA sequence from clone RP23-478B14 on chromosome 11, complete
            sequence
          Length = 169765

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 303  aggagtacaaggtggaggtgc 323
            |||||||||||||||||||||
Sbjct: 4193 aggagtacaaggtggaggtgc 4173
to top
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 272   gaaggagacgcggaagccgtg 292
             |||||||||||||||||||||
Sbjct: 58051 gaaggagacgcggaagccgtg 58031
to top
>gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, complete sequence
          Length = 214098

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 105    ccctgcccagaccttccacaccctc 129
              |||| ||||||||||||||||||||
Sbjct: 184238 ccctccccagaccttccacaccctc 184262
to top
>dbj|AK153998.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430020D03
           product:Weakly similar to putative ubiquitin
           carboxyl-terminal hydrolase C6G9.08, full insert
           sequence
          Length = 2048

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 444 aggagtacaaggtggaggtgc 464
to top
>dbj|AK147744.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library,
           clone:G270019L10 product:Weakly similar to putative
           ubiquitin carboxyl-terminal hydrolase C6G9.08, full
           insert sequence
          Length = 1824

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 480 aggagtacaaggtggaggtgc 500
to top
>dbj|AK050031.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730004P03 product:hypothetical
           Ubiquitin domain containing protein, full insert
           sequence
          Length = 1179

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 443 aggagtacaaggtggaggtgc 463
to top
>dbj|AK043952.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830058J21 product:weakly
           similar to PUTATIVE UBIQUITIN CARBOXYL-TERMINAL
           HYDROLASE C6G9.08 (EC 3.1.2.15) (UBIQUITIN
           THIOLESTERASE) (UBIQUITIN-SPECIFIC PROCESSING PROTEASE)
           (DEUBIQUITINATING ENZYME) [Schizosaccharomyces pombe],
           full insert sequence
          Length = 1465

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 439 aggagtacaaggtggaggtgc 459
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 272     gaaggagacgcggaagccgtg 292
               |||||||||||||||||||||
Sbjct: 7073451 gaaggagacgcggaagccgtg 7073471
to top
>gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, complete sequence
          Length = 131359

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 418   catccccttaagcccctacta 438
             |||||||||||||||||||||
Sbjct: 56830 catccccttaagcccctacta 56810
to top
>gb|BC106093.1| Mus musculus ubiquitin-like domain containing CTD phosphatase 1,
           mRNA (cDNA clone MGC:117826 IMAGE:5098953), complete cds
          Length = 1294

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 303 aggagtacaaggtggaggtgc 323
           |||||||||||||||||||||
Sbjct: 409 aggagtacaaggtggaggtgc 429
to top
>emb|AL669944.8| Mouse DNA sequence from clone RP23-388G23 on chromosome 11, complete
             sequence
          Length = 76047

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 303   aggagtacaaggtggaggtgc 323
             |||||||||||||||||||||
Sbjct: 58656 aggagtacaaggtggaggtgc 58636
to top
>ref|NM_121581.2| Arabidopsis thaliana structural constituent of ribosome AT5G15760
           mRNA, complete cds
          Length = 747

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 434 tactacttctggccgcggaaagatgcatggga 465
           ||||||||||||||  |||||||||| |||||
Sbjct: 447 tactacttctggcctaggaaagatgcttggga 478
to top
>gb|AC102923.10| Mus musculus chromosome 1, clone RP24-262J2, complete sequence
          Length = 159541

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   ccttccacaccctcctcctcttcc 139
             |||||| |||||||||||||||||
Sbjct: 33884 ccttcctcaccctcctcctcttcc 33907
to top
>ref|XM_589072.2| PREDICTED: Bos taurus similar to myosin, heavy polypeptide 13,
            skeletal muscle (LOC511687), partial mRNA
          Length = 3477

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  cctcctcctcttccagcctc 145
            ||||||||||||||||||||
Sbjct: 3310 cctcctcctcttccagcctc 3291
to top
>gb|BC065536.1| Homo sapiens dystonin, mRNA (cDNA clone IMAGE:6008053), complete cds
          Length = 3570

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  cctcctcctcttccagcctc 145
            ||||||||||||||||||||
Sbjct: 3391 cctcctcctcttccagcctc 3372
to top
>ref|XM_954375.1| Neurospora crassa OR74A hypothetical protein (NCU02346.1) partial
           mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 ccacaccctcctcctcttcc 139
           ||||||||||||||||||||
Sbjct: 978 ccacaccctcctcctcttcc 959
to top
>ref|XM_331121.1| Neurospora crassa OR74A hypothetical protein (NCU02346.1) partial
           mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 ccacaccctcctcctcttcc 139
           ||||||||||||||||||||
Sbjct: 978 ccacaccctcctcctcttcc 959
to top
>ref|XM_748213.1| Aspergillus fumigatus Af293 U1 small nuclear ribonucleoprotein 70
           kDa (Afu5g13480) partial mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 ctcttccagcctcgtccacc 152
           ||||||||||||||||||||
Sbjct: 34  ctcttccagcctcgtccacc 53
to top
>ref|XM_387487.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07311.1)
            partial mRNA
          Length = 2112

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    gcatcatcgtcttcctcctc 24
            ||||||||||||||||||||
Sbjct: 1445 gcatcatcgtcttcctcctc 1426
to top
>ref|XM_386388.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06212.1)
            partial mRNA
          Length = 2535

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    catcatcgtcttcctcctct 25
            ||||||||||||||||||||
Sbjct: 2338 catcatcgtcttcctcctct 2319
to top
>gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome 8, complete sequence
          Length = 180692

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 453    aagatgcatgggaggaactgagag 476
              |||||| |||||||||||||||||
Sbjct: 174206 aagatggatgggaggaactgagag 174183
to top
>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete sequence
          Length = 223306

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 453   aagatgcatgggaggaactgagag 476
             |||||| |||||||||||||||||
Sbjct: 51693 aagatggatgggaggaactgagag 51670
to top
>emb|AL096710.8|HSDJ61B2 Human DNA sequence from clone RP1-61B2 on chromosome 6p11.2-12.3
             Contains part of the BPAG1 gene for bullous pemphigoid
             antigen 1 (230/240kD), complete sequence
          Length = 119666

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   cctcctcctcttccagcctc 145
             ||||||||||||||||||||
Sbjct: 71036 cctcctcctcttccagcctc 71055
to top
>emb|X60113.1|DGADHDUP D.guanche Adh and Adh-dup genes for alcohol dehydrogenase
          Length = 4433

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 2504 ctctggcagcaaggcggcgg 2523
to top
>emb|X60112.1|DMADHDUP D.madeirensis Adh and Adh-dup genes for alcohol dehydrogenase
          Length = 3881

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1724 ctctggcagcaaggcggcgg 1743
to top
>emb|X58279.1|TAHSP173 T.aestivum mRNA for heat shock protein 17.3
          Length = 719

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 566 ggcggcggcagcttgtcgac 585
           ||||||||||||||||||||
Sbjct: 478 ggcggcggcagcttgtcgac 459
to top
>emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F8 (ESSA project)
          Length = 96892

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 434   tactacttctggccgcggaaagatgcatggga 465
             ||||||||||||||  |||||||||| |||||
Sbjct: 59355 tactacttctggcctaggaaagatgcttggga 59386
to top
>emb|CR352305.6| Zebrafish DNA sequence from clone CH211-95N4 in linkage group 17,
             complete sequence
          Length = 155030

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   cctcctcctcttccagcctc 145
             ||||||||||||||||||||
Sbjct: 12595 cctcctcctcttccagcctc 12614



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   cctcctcctcttccagcctc 145
             ||||||||||||||||||||
Sbjct: 11216 cctcctcctcttccagcctc 11235
to top
>emb|X55391.1|DSADH812 D.subobscura DNA for Adh retrosequence 812
          Length = 3700

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1329 ctctggcagcaaggcggcgg 1348
to top
>emb|X55390.1|DSADH135 D.pseudobscura DNA for Adh retrosequence 135
          Length = 1611

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 ctctggcagcaaggcggcgg 573
           ||||||||||||||||||||
Sbjct: 779 ctctggcagcaaggcggcgg 798
to top
>dbj|AK123594.1| Homo sapiens cDNA FLJ41600 fis, clone CTONG2026920
          Length = 2582

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  ggaaagatgcatgggaggaa 469
            ||||||||||||||||||||
Sbjct: 1828 ggaaagatgcatgggaggaa 1847
to top
>emb|BX119916.10| Zebrafish DNA sequence from clone CH211-202I5 in linkage group 11,
             complete sequence
          Length = 196164

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   gaaagatgcatgggaggaac 470
             ||||||||||||||||||||
Sbjct: 87358 gaaagatgcatgggaggaac 87339
to top
>gb|AY874376.1| Drosophila subobscura CG9010/ADH fusion (Adh-Twain) gene, complete
            cds
          Length = 2173

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1344 ctctggcagcaaggcggcgg 1363
to top
>gb|AY874375.1| Drosophila subobscura strain line 36 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874374.1| Drosophila subobscura strain line 35 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874373.1| Drosophila subobscura strain line 33 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1419

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1143 ctctggcagcaaggcggcgg 1162
to top
>gb|AY874372.1| Drosophila subobscura strain line 26 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874371.1| Drosophila subobscura strain line 24 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874370.1| Drosophila subobscura strain line 22 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874369.1| Drosophila subobscura strain line 21 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874368.1| Drosophila subobscura strain line 16 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874367.1| Drosophila subobscura strain line 11 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874366.1| Drosophila subobscura strain line 10 alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874365.1| Drosophila subobscura strain line 7 alcohol dehydrogenase (Adh-Twain)
            gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874364.1| Drosophila subobscura strain line 6 alcohol dehydrogenase (Adh-Twain)
            gene, partial cds
          Length = 1412

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1136 ctctggcagcaaggcggcgg 1155
to top
>gb|AY874363.1| Drosophila subobscura strain line 3a alcohol dehydrogenase
            (Adh-Twain) gene, partial cds
          Length = 1425

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1149 ctctggcagcaaggcggcgg 1168
to top
>gb|AY874362.1| Drosophila subobscura strain line 1 alcohol dehydrogenase (Adh-Twain)
            gene, partial cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1130 ctctggcagcaaggcggcgg 1149
to top
>gb|AY874361.1| Drosophila subobscura strain line 0 alcohol dehydrogenase (Adh-Twain)
            gene, partial cds
          Length = 1422

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1146 ctctggcagcaaggcggcgg 1165
to top
>gb|AY874360.1| Drosophila guanche CG9010/ADH fusion (Adh-Twain) mRNA, 5' UTR and
           partial cds
          Length = 1125

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 ctctggcagcaaggcggcgg 573
           ||||||||||||||||||||
Sbjct: 833 ctctggcagcaaggcggcgg 852
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        gcatcatcgtcttcctcctc 24
                ||||||||||||||||||||
Sbjct: 29472136 gcatcatcgtcttcctcctc 29472117
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 6        catcatcgtcttcctcctct 25
                ||||||||||||||||||||
Sbjct: 40637064 catcatcgtcttcctcctct 40637083
to top
>gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, complete sequence
          Length = 189712

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    ggaaagatgcatgggaggaa 469
              ||||||||||||||||||||
Sbjct: 123882 ggaaagatgcatgggaggaa 123863
to top
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0093F16
          Length = 160925

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     catcatcgtcttcctcctct 25
             ||||||||||||||||||||
Sbjct: 79042 catcatcgtcttcctcctct 79061
to top
>gb|BT003711.1| Arabidopsis thaliana At5g15760 mRNA, complete cds
          Length = 552

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 434 tactacttctggccgcggaaagatgcatggga 465
           ||||||||||||||  |||||||||| |||||
Sbjct: 400 tactacttctggcctaggaaagatgcttggga 431
to top
>gb|AC007238.3| Homo sapiens BAC clone RP11-19M18 from 2, complete sequence
          Length = 169147

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   acaccctcctcctcttccag 141
             ||||||||||||||||||||
Sbjct: 75239 acaccctcctcctcttccag 75220
to top
>gb|AC067937.1|AC067937 Neurospora crassa chromosome 7, clone X11-G8, complete sequence
          Length = 43556

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ccacaccctcctcctcttcc 139
             ||||||||||||||||||||
Sbjct: 20198 ccacaccctcctcctcttcc 20217
to top
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11
          Length = 46353

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ccacaccctcctcctcttcc 139
             ||||||||||||||||||||
Sbjct: 15900 ccacaccctcctcctcttcc 15919
to top
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0655A07
          Length = 172473

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     gcatcatcgtcttcctcctc 24
             ||||||||||||||||||||
Sbjct: 36642 gcatcatcgtcttcctcctc 36623
to top
>dbj|AK117858.1| Arabidopsis thaliana At5g15760 mRNA for putative ribosomal protein
           3 precursor, complete cds, clone: RAFL19-02-C10
          Length = 745

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 434 tactacttctggccgcggaaagatgcatggga 465
           ||||||||||||||  |||||||||| |||||
Sbjct: 445 tactacttctggcctaggaaagatgcttggga 476
to top
>dbj|AK121373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C08,
          full insert sequence
          Length = 1034

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 6  catcatcgtcttcctcctct 25
          ||||||||||||||||||||
Sbjct: 58 catcatcgtcttcctcctct 77
to top
>emb|CR388132.9| Zebrafish DNA sequence from clone DKEY-23A23 in linkage group 4, complete
              sequence
          Length = 206525

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    gagtacaaggtggaggtgcc 324
              ||||||||||||||||||||
Sbjct: 182188 gagtacaaggtggaggtgcc 182169
to top
>gb|U68472.1|DMU68472 Drosophila madeirensis alcohol dehydrogenase (Adh) processed
           pseudogene
          Length = 1403

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 ctctggcagcaaggcggcgg 573
           ||||||||||||||||||||
Sbjct: 492 ctctggcagcaaggcggcgg 511
to top
>gb|U68471.1|DMU68471 Drosophila madeirensis alcohol dehydrogenase (Adh) processed
           pseudogene
          Length = 1042

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 ctctggcagcaaggcggcgg 573
           ||||||||||||||||||||
Sbjct: 533 ctctggcagcaaggcggcgg 552
to top
>gb|U68470.1|DGU68470 Drosophila guanche alcohol dehydrogenase (Adh) processed pseudogene
          Length = 1323

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 ctctggcagcaaggcggcgg 573
           ||||||||||||||||||||
Sbjct: 572 ctctggcagcaaggcggcgg 591
to top
>gb|U68469.1|DGU68469 Drosophila guanche alcohol dehydrogenase (Adh) processed pseudogene
          Length = 2146

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1436 ctctggcagcaaggcggcgg 1455
to top
>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17,
              complete sequence
          Length = 205685

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    cctcctcctcttccagcctc 145
              ||||||||||||||||||||
Sbjct: 178048 cctcctcctcttccagcctc 178029
to top
>gb|U88068.1|OSU88068 Oryza sativa sec14 like protein mRNA, complete cds
          Length = 1142

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 6  catcatcgtcttcctcctct 25
          ||||||||||||||||||||
Sbjct: 32 catcatcgtcttcctcctct 51
to top
>emb|AL928628.9| Zebrafish DNA sequence from clone DKEY-5G18 in linkage group 7,
             complete sequence
          Length = 229942

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 116   ccttccacaccctcctcctcttcc 139
             ||||||||||||| ||||||||||
Sbjct: 56973 ccttccacaccctactcctcttcc 56950
to top
>emb|AL591469.9| Mouse DNA sequence from clone RP23-390D17 on chromosome 11, complete
             sequence
          Length = 168981

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   cttccacaccctcctcctct 136
             ||||||||||||||||||||
Sbjct: 20771 cttccacaccctcctcctct 20790
to top
>gb|M55545.1|DROADHBB Drosophila subobscura alchohol dehydrogenase (Adh) gene, and alchohol
            dehydrogenase (Adh-dup) gene, complete cds's
          Length = 3980

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  ctctggcagcaaggcggcgg 573
            ||||||||||||||||||||
Sbjct: 1726 ctctggcagcaaggcggcgg 1745
to top
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0482D04
          Length = 144583

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      catcatcgtcttcctcctct 25
              ||||||||||||||||||||
Sbjct: 117079 catcatcgtcttcctcctct 117098


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,711,658
Number of Sequences: 3902068
Number of extensions: 4711658
Number of successful extensions: 127883
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127492
Number of HSP's gapped (non-prelim): 391
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top