ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63p21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192854.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 Score = 718 bits (362), Expect = 0.0 Identities = 611/695 (87%) Strand = Plus / Plus Query: 15 atagcccatggtggtggtaggcgatgccagaaagctggttgccagaagggtgctgaagga 74 ||||||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||||| Sbjct: 838 atagcccatggcggtggtaggagatgccaaaaacctggttgtcagaagggtgctgaagga 897 Query: 75 aggaccatatattgcaaggcccatggtggagggaggagatgtgagtttcttggatgtaca 134 |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| ||| Sbjct: 898 aggaccatatattgcaaggcccatggtggaggaaggagatgccaatttcttggatgcaca 957 Query: 135 aagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggccgccggtgcagt 194 ||||| || ||||| ||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 958 aagagtgccgaagggcgcacagaccactgtatagctcatggtggtggtcgccgctgcagt 1017 Query: 195 aatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatcaggcatggtggt 254 ||||||| || ||||| ||||| || || | ||||||||| |||||||||||||| ||| Sbjct: 1018 catgatggttgttcccgggctgcacgtggcaaatctggcttgtgcatcaggcatggaggt 1077 Query: 255 ggaaaaaggtgtcagcaggagaagtgcaccaagagcgcagaaggtcattctggcctctgc 314 || ||||| |||||| ||||||| || | || |||||| ||||||||||| ||| ||||| Sbjct: 1078 ggcaaaagatgtcagaaggagaactgtatcaggagcgccgaaggtcattcaggcttctgc 1137 Query: 315 atctctcatgggggtgggaggcgttgccagtttccagaatgtgcaaagggtgcacaggga 374 ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 1138 atctctcatgggggtgggaggcgttgccaatttccagaatgcacgaagggtgcacaggga 1197 Query: 375 agcacaaagttctgcaaggcacatggtggaggcaagcgctgcactttcttgggctgtacc 434 |||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || | | Sbjct: 1198 agcacaaagttctgcaaggcgcatggtggaggaaagcgatgcacattctcgggttgcaac 1257 Query: 435 aaaggagctgaaggcagcaccccttactgcaagggccatggaggaggcaagcgctgctta 494 |||||||||||||||||||| | | ||||||||||| || ||||||||||| |||||| Sbjct: 1258 aaaggagctgaaggcagcactctcttttgcaagggccacggtggaggcaagcgatgctta 1317 Query: 495 tttgagggtggtggagtgtgccccaagagcgtgcatggcgggacgcagtactgtgttgcg 554 ||| |||||||||| |||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 1318 tttcagggtggtggtgtgtgcccgaagagcgtgcatggcggaactcaatactgtgttgct 1377 Query: 555 cacggtggtggcaagaggtgcgctatttctgattgcaccaagagtgctagagggcggacg 614 || |||||||| |||||||| |||||||||| |||||||||||||||||||||||| || Sbjct: 1378 catggtggtgggaagaggtgtgctatttctggttgcaccaagagtgctagagggcgtaca 1437 Query: 615 gagtactgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagt 674 |||||||||||||||||||| ||||||||||| |||| ||| || |||| | ||||||| Sbjct: 1438 gagtactgcgtgcgccatggaggtggcaagaggtgcaagtttgagggctgcgcgaagagt 1497 Query: 675 gcacangggagcactgatttctgcaaggcgcatgg 709 || || |||||||| |||||||||||||| ||||| Sbjct: 1498 gcgcaggggagcaccgatttctgcaaggctcatgg 1532 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 384 ttctgcaaggcacatggtggaggcaagcgctgc 416 ||||||||||| ||||||||||| ||||||||| Sbjct: 1516 ttctgcaaggctcatggtggaggtaagcgctgc 1548
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 718 bits (362), Expect = 0.0 Identities = 611/695 (87%) Strand = Plus / Plus Query: 15 atagcccatggtggtggtaggcgatgccagaaagctggttgccagaagggtgctgaagga 74 ||||||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||||| Sbjct: 24808018 atagcccatggcggtggtaggagatgccaaaaacctggttgtcagaagggtgctgaagga 24808077 Query: 75 aggaccatatattgcaaggcccatggtggagggaggagatgtgagtttcttggatgtaca 134 |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| ||| Sbjct: 24808078 aggaccatatattgcaaggcccatggtggaggaaggagatgccaatttcttggatgcaca 24808137 Query: 135 aagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggccgccggtgcagt 194 ||||| || ||||| ||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 24808138 aagagtgccgaagggcgcacagaccactgtatagctcatggtggtggtcgccgctgcagt 24808197 Query: 195 aatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatcaggcatggtggt 254 ||||||| || ||||| ||||| || || | ||||||||| |||||||||||||| ||| Sbjct: 24808198 catgatggttgttcccgggctgcacgtggcaaatctggcttgtgcatcaggcatggaggt 24808257 Query: 255 ggaaaaaggtgtcagcaggagaagtgcaccaagagcgcagaaggtcattctggcctctgc 314 || ||||| |||||| ||||||| || | || |||||| ||||||||||| ||| ||||| Sbjct: 24808258 ggcaaaagatgtcagaaggagaactgtatcaggagcgccgaaggtcattcaggcttctgc 24808317 Query: 315 atctctcatgggggtgggaggcgttgccagtttccagaatgtgcaaagggtgcacaggga 374 ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 24808318 atctctcatgggggtgggaggcgttgccaatttccagaatgcacgaagggtgcacaggga 24808377 Query: 375 agcacaaagttctgcaaggcacatggtggaggcaagcgctgcactttcttgggctgtacc 434 |||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || | | Sbjct: 24808378 agcacaaagttctgcaaggcgcatggtggaggaaagcgatgcacattctcgggttgcaac 24808437 Query: 435 aaaggagctgaaggcagcaccccttactgcaagggccatggaggaggcaagcgctgctta 494 |||||||||||||||||||| | | ||||||||||| || ||||||||||| |||||| Sbjct: 24808438 aaaggagctgaaggcagcactctcttttgcaagggccacggtggaggcaagcgatgctta 24808497 Query: 495 tttgagggtggtggagtgtgccccaagagcgtgcatggcgggacgcagtactgtgttgcg 554 ||| |||||||||| |||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 24808498 tttcagggtggtggtgtgtgcccgaagagcgtgcatggcggaactcaatactgtgttgct 24808557 Query: 555 cacggtggtggcaagaggtgcgctatttctgattgcaccaagagtgctagagggcggacg 614 || |||||||| |||||||| |||||||||| |||||||||||||||||||||||| || Sbjct: 24808558 catggtggtgggaagaggtgtgctatttctggttgcaccaagagtgctagagggcgtaca 24808617 Query: 615 gagtactgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagt 674 |||||||||||||||||||| ||||||||||| |||| ||| || |||| | ||||||| Sbjct: 24808618 gagtactgcgtgcgccatggaggtggcaagaggtgcaagtttgagggctgcgcgaagagt 24808677 Query: 675 gcacangggagcactgatttctgcaaggcgcatgg 709 || || |||||||| |||||||||||||| ||||| Sbjct: 24808678 gcgcaggggagcaccgatttctgcaaggctcatgg 24808712 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 384 ttctgcaaggcacatggtggaggcaagcgctgc 416 ||||||||||| ||||||||||| ||||||||| Sbjct: 24808696 ttctgcaaggctcatggtggaggtaagcgctgc 24808728
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 718 bits (362), Expect = 0.0 Identities = 611/695 (87%) Strand = Plus / Plus Query: 15 atagcccatggtggtggtaggcgatgccagaaagctggttgccagaagggtgctgaagga 74 ||||||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||||| Sbjct: 31138 atagcccatggcggtggtaggagatgccaaaaacctggttgtcagaagggtgctgaagga 31197 Query: 75 aggaccatatattgcaaggcccatggtggagggaggagatgtgagtttcttggatgtaca 134 |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| ||| Sbjct: 31198 aggaccatatattgcaaggcccatggtggaggaaggagatgccaatttcttggatgcaca 31257 Query: 135 aagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggccgccggtgcagt 194 ||||| || ||||| ||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 31258 aagagtgccgaagggcgcacagaccactgtatagctcatggtggtggtcgccgctgcagt 31317 Query: 195 aatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatcaggcatggtggt 254 ||||||| || ||||| ||||| || || | ||||||||| |||||||||||||| ||| Sbjct: 31318 catgatggttgttcccgggctgcacgtggcaaatctggcttgtgcatcaggcatggaggt 31377 Query: 255 ggaaaaaggtgtcagcaggagaagtgcaccaagagcgcagaaggtcattctggcctctgc 314 || ||||| |||||| ||||||| || | || |||||| ||||||||||| ||| ||||| Sbjct: 31378 ggcaaaagatgtcagaaggagaactgtatcaggagcgccgaaggtcattcaggcttctgc 31437 Query: 315 atctctcatgggggtgggaggcgttgccagtttccagaatgtgcaaagggtgcacaggga 374 ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 31438 atctctcatgggggtgggaggcgttgccaatttccagaatgcacgaagggtgcacaggga 31497 Query: 375 agcacaaagttctgcaaggcacatggtggaggcaagcgctgcactttcttgggctgtacc 434 |||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || | | Sbjct: 31498 agcacaaagttctgcaaggcgcatggtggaggaaagcgatgcacattctcgggttgcaac 31557 Query: 435 aaaggagctgaaggcagcaccccttactgcaagggccatggaggaggcaagcgctgctta 494 |||||||||||||||||||| | | ||||||||||| || ||||||||||| |||||| Sbjct: 31558 aaaggagctgaaggcagcactctcttttgcaagggccacggtggaggcaagcgatgctta 31617 Query: 495 tttgagggtggtggagtgtgccccaagagcgtgcatggcgggacgcagtactgtgttgcg 554 ||| |||||||||| |||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 31618 tttcagggtggtggtgtgtgcccgaagagcgtgcatggcggaactcaatactgtgttgct 31677 Query: 555 cacggtggtggcaagaggtgcgctatttctgattgcaccaagagtgctagagggcggacg 614 || |||||||| |||||||| |||||||||| |||||||||||||||||||||||| || Sbjct: 31678 catggtggtgggaagaggtgtgctatttctggttgcaccaagagtgctagagggcgtaca 31737 Query: 615 gagtactgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagt 674 |||||||||||||||||||| ||||||||||| |||| ||| || |||| | ||||||| Sbjct: 31738 gagtactgcgtgcgccatggaggtggcaagaggtgcaagtttgagggctgcgcgaagagt 31797 Query: 675 gcacangggagcactgatttctgcaaggcgcatgg 709 || || |||||||| |||||||||||||| ||||| Sbjct: 31798 gcgcaggggagcaccgatttctgcaaggctcatgg 31832 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 384 ttctgcaaggcacatggtggaggcaagcgctgc 416 ||||||||||| ||||||||||| ||||||||| Sbjct: 31816 ttctgcaaggctcatggtggaggtaagcgctgc 31848
>dbj|AK103381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127E22, full insert sequence Length = 2794 Score = 718 bits (362), Expect = 0.0 Identities = 611/695 (87%) Strand = Plus / Plus Query: 15 atagcccatggtggtggtaggcgatgccagaaagctggttgccagaagggtgctgaagga 74 ||||||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||||| Sbjct: 1396 atagcccatggcggtggtaggagatgccaaaaacctggttgtcagaagggtgctgaagga 1455 Query: 75 aggaccatatattgcaaggcccatggtggagggaggagatgtgagtttcttggatgtaca 134 |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| ||| Sbjct: 1456 aggaccatatattgcaaggcccatggtggaggaaggagatgccaatttcttggatgcaca 1515 Query: 135 aagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggccgccggtgcagt 194 ||||| || ||||| ||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 1516 aagagtgccgaagggcgcacagaccactgtatagctcatggtggtggtcgccgctgcagt 1575 Query: 195 aatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatcaggcatggtggt 254 ||||||| || ||||| ||||| || || | ||||||||| |||||||||||||| ||| Sbjct: 1576 catgatggttgttcccgggctgcacgtggcaaatctggcttgtgcatcaggcatggaggt 1635 Query: 255 ggaaaaaggtgtcagcaggagaagtgcaccaagagcgcagaaggtcattctggcctctgc 314 || ||||| |||||| ||||||| || | || |||||| ||||||||||| ||| ||||| Sbjct: 1636 ggcaaaagatgtcagaaggagaactgtatcaggagcgccgaaggtcattcaggcttctgc 1695 Query: 315 atctctcatgggggtgggaggcgttgccagtttccagaatgtgcaaagggtgcacaggga 374 ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 1696 atctctcatgggggtgggaggcgttgccaatttccagaatgcacgaagggtgcacaggga 1755 Query: 375 agcacaaagttctgcaaggcacatggtggaggcaagcgctgcactttcttgggctgtacc 434 |||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || | | Sbjct: 1756 agcacaaagttctgcaaggcgcatggtggaggaaagcgatgcacattctcgggttgcaac 1815 Query: 435 aaaggagctgaaggcagcaccccttactgcaagggccatggaggaggcaagcgctgctta 494 |||||||||||||||||||| | | ||||||||||| || ||||||||||| |||||| Sbjct: 1816 aaaggagctgaaggcagcactctcttttgcaagggccacggtggaggcaagcgatgctta 1875 Query: 495 tttgagggtggtggagtgtgccccaagagcgtgcatggcgggacgcagtactgtgttgcg 554 ||| |||||||||| |||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 1876 tttcagggtggtggtgtgtgcccgaagagcgtgcatggcggaactcaatactgtgttgct 1935 Query: 555 cacggtggtggcaagaggtgcgctatttctgattgcaccaagagtgctagagggcggacg 614 || |||||||| |||||||| |||||||||| |||||||||||||||||||||||| || Sbjct: 1936 catggtggtgggaagaggtgtgctatttctggttgcaccaagagtgctagagggcgtaca 1995 Query: 615 gagtactgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagt 674 |||||||||||||||||||| ||||||||||| |||| ||| || |||| | ||||||| Sbjct: 1996 gagtactgcgtgcgccatggaggtggcaagaggtgcaagtttgagggctgcgcgaagagt 2055 Query: 675 gcacangggagcactgatttctgcaaggcgcatgg 709 || || |||||||| |||||||||||||| ||||| Sbjct: 2056 gcgcaggggagcaccgatttctgcaaggctcatgg 2090 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 384 ttctgcaaggcacatggtggaggcaagcgctgc 416 ||||||||||| ||||||||||| ||||||||| Sbjct: 2074 ttctgcaaggctcatggtggaggtaagcgctgc 2106
>dbj|AK101548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O05, full insert sequence Length = 2870 Score = 718 bits (362), Expect = 0.0 Identities = 611/695 (87%) Strand = Plus / Plus Query: 15 atagcccatggtggtggtaggcgatgccagaaagctggttgccagaagggtgctgaagga 74 ||||||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||||| Sbjct: 1385 atagcccatggcggtggtaggagatgccaaaaacctggttgtcagaagggtgctgaagga 1444 Query: 75 aggaccatatattgcaaggcccatggtggagggaggagatgtgagtttcttggatgtaca 134 |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| ||| Sbjct: 1445 aggaccatatattgcaaggcccatggtggaggaaggagatgccaatttcttggatgcaca 1504 Query: 135 aagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggccgccggtgcagt 194 ||||| || ||||| ||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 1505 aagagtgccgaagggcgcacagaccactgtatagctcatggtggtggtcgccgctgcagt 1564 Query: 195 aatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatcaggcatggtggt 254 ||||||| || ||||| ||||| || || | ||||||||| |||||||||||||| ||| Sbjct: 1565 catgatggttgttcccgggctgcacgtggcaaatctggcttgtgcatcaggcatggaggt 1624 Query: 255 ggaaaaaggtgtcagcaggagaagtgcaccaagagcgcagaaggtcattctggcctctgc 314 || ||||| |||||| ||||||| || | || |||||| ||||||||||| ||| ||||| Sbjct: 1625 ggcaaaagatgtcagaaggagaactgtatcaggagcgccgaaggtcattcaggcttctgc 1684 Query: 315 atctctcatgggggtgggaggcgttgccagtttccagaatgtgcaaagggtgcacaggga 374 ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 1685 atctctcatgggggtgggaggcgttgccaatttccagaatgcacgaagggtgcacaggga 1744 Query: 375 agcacaaagttctgcaaggcacatggtggaggcaagcgctgcactttcttgggctgtacc 434 |||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || | | Sbjct: 1745 agcacaaagttctgcaaggcgcatggtggaggaaagcgatgcacattctcgggttgcaac 1804 Query: 435 aaaggagctgaaggcagcaccccttactgcaagggccatggaggaggcaagcgctgctta 494 |||||||||||||||||||| | | ||||||||||| || ||||||||||| |||||| Sbjct: 1805 aaaggagctgaaggcagcactctcttttgcaagggccacggtggaggcaagcgatgctta 1864 Query: 495 tttgagggtggtggagtgtgccccaagagcgtgcatggcgggacgcagtactgtgttgcg 554 ||| |||||||||| |||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 1865 tttcagggtggtggtgtgtgcccgaagagcgtgcatggcggaactcaatactgtgttgct 1924 Query: 555 cacggtggtggcaagaggtgcgctatttctgattgcaccaagagtgctagagggcggacg 614 || |||||||| |||||||| |||||||||| |||||||||||||||||||||||| || Sbjct: 1925 catggtggtgggaagaggtgtgctatttctggttgcaccaagagtgctagagggcgtaca 1984 Query: 615 gagtactgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagt 674 |||||||||||||||||||| ||||||||||| |||| ||| || |||| | ||||||| Sbjct: 1985 gagtactgcgtgcgccatggaggtggcaagaggtgcaagtttgagggctgcgcgaagagt 2044 Query: 675 gcacangggagcactgatttctgcaaggcgcatgg 709 || || |||||||| |||||||||||||| ||||| Sbjct: 2045 gcgcaggggagcaccgatttctgcaaggctcatgg 2079 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 384 ttctgcaaggcacatggtggaggcaagcgctgc 416 ||||||||||| ||||||||||| ||||||||| Sbjct: 2063 ttctgcaaggctcatggtggaggtaagcgctgc 2095
>dbj|AK101393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036N15, full insert sequence Length = 2936 Score = 718 bits (362), Expect = 0.0 Identities = 611/695 (87%) Strand = Plus / Plus Query: 15 atagcccatggtggtggtaggcgatgccagaaagctggttgccagaagggtgctgaagga 74 ||||||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||||| Sbjct: 1457 atagcccatggcggtggtaggagatgccaaaaacctggttgtcagaagggtgctgaagga 1516 Query: 75 aggaccatatattgcaaggcccatggtggagggaggagatgtgagtttcttggatgtaca 134 |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| ||| Sbjct: 1517 aggaccatatattgcaaggcccatggtggaggaaggagatgccaatttcttggatgcaca 1576 Query: 135 aagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggccgccggtgcagt 194 ||||| || ||||| ||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 1577 aagagtgccgaagggcgcacagaccactgtatagctcatggtggtggtcgccgctgcagt 1636 Query: 195 aatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatcaggcatggtggt 254 ||||||| || ||||| ||||| || || | ||||||||| |||||||||||||| ||| Sbjct: 1637 catgatggttgttcccgggctgcacgtggcaaatctggcttgtgcatcaggcatggaggt 1696 Query: 255 ggaaaaaggtgtcagcaggagaagtgcaccaagagcgcagaaggtcattctggcctctgc 314 || ||||| |||||| ||||||| || | || |||||| ||||||||||| ||| ||||| Sbjct: 1697 ggcaaaagatgtcagaaggagaactgtatcaggagcgccgaaggtcattcaggcttctgc 1756 Query: 315 atctctcatgggggtgggaggcgttgccagtttccagaatgtgcaaagggtgcacaggga 374 ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 1757 atctctcatgggggtgggaggcgttgccaatttccagaatgcacgaagggtgcacaggga 1816 Query: 375 agcacaaagttctgcaaggcacatggtggaggcaagcgctgcactttcttgggctgtacc 434 |||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || | | Sbjct: 1817 agcacaaagttctgcaaggcgcatggtggaggaaagcgatgcacattctcgggttgcaac 1876 Query: 435 aaaggagctgaaggcagcaccccttactgcaagggccatggaggaggcaagcgctgctta 494 |||||||||||||||||||| | | ||||||||||| || ||||||||||| |||||| Sbjct: 1877 aaaggagctgaaggcagcactctcttttgcaagggccacggtggaggcaagcgatgctta 1936 Query: 495 tttgagggtggtggagtgtgccccaagagcgtgcatggcgggacgcagtactgtgttgcg 554 ||| |||||||||| |||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 1937 tttcagggtggtggtgtgtgcccgaagagcgtgcatggcggaactcaatactgtgttgct 1996 Query: 555 cacggtggtggcaagaggtgcgctatttctgattgcaccaagagtgctagagggcggacg 614 || |||||||| |||||||| |||||||||| |||||||||||||||||||||||| || Sbjct: 1997 catggtggtgggaagaggtgtgctatttctggttgcaccaagagtgctagagggcgtaca 2056 Query: 615 gagtactgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagt 674 |||||||||||||||||||| ||||||||||| |||| ||| || |||| | ||||||| Sbjct: 2057 gagtactgcgtgcgccatggaggtggcaagaggtgcaagtttgagggctgcgcgaagagt 2116 Query: 675 gcacangggagcactgatttctgcaaggcgcatgg 709 || || |||||||| |||||||||||||| ||||| Sbjct: 2117 gcgcaggggagcaccgatttctgcaaggctcatgg 2151 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 384 ttctgcaaggcacatggtggaggcaagcgctgc 416 ||||||||||| ||||||||||| ||||||||| Sbjct: 2135 ttctgcaaggctcatggtggaggtaagcgctgc 2167
>dbj|AK099577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038F15, full insert sequence Length = 2693 Score = 718 bits (362), Expect = 0.0 Identities = 611/695 (87%) Strand = Plus / Plus Query: 15 atagcccatggtggtggtaggcgatgccagaaagctggttgccagaagggtgctgaagga 74 ||||||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||||| Sbjct: 1281 atagcccatggcggtggtaggagatgccaaaaacctggttgtcagaagggtgctgaagga 1340 Query: 75 aggaccatatattgcaaggcccatggtggagggaggagatgtgagtttcttggatgtaca 134 |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| ||| Sbjct: 1341 aggaccatatattgcaaggcccatggtggaggaaggagatgccaatttcttggatgcaca 1400 Query: 135 aagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggccgccggtgcagt 194 ||||| || ||||| ||||| |||||||| || || ||||||||||| ||||| |||||| Sbjct: 1401 aagagtgccgaagggcgcacagaccactgtatagctcatggtggtggtcgccgctgcagt 1460 Query: 195 aatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatcaggcatggtggt 254 ||||||| || ||||| ||||| || || | ||||||||| |||||||||||||| ||| Sbjct: 1461 catgatggttgttcccgggctgcacgtggcaaatctggcttgtgcatcaggcatggaggt 1520 Query: 255 ggaaaaaggtgtcagcaggagaagtgcaccaagagcgcagaaggtcattctggcctctgc 314 || ||||| |||||| ||||||| || | || |||||| ||||||||||| ||| ||||| Sbjct: 1521 ggcaaaagatgtcagaaggagaactgtatcaggagcgccgaaggtcattcaggcttctgc 1580 Query: 315 atctctcatgggggtgggaggcgttgccagtttccagaatgtgcaaagggtgcacaggga 374 ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 1581 atctctcatgggggtgggaggcgttgccaatttccagaatgcacgaagggtgcacaggga 1640 Query: 375 agcacaaagttctgcaaggcacatggtggaggcaagcgctgcactttcttgggctgtacc 434 |||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || | | Sbjct: 1641 agcacaaagttctgcaaggcgcatggtggaggaaagcgatgcacattctcgggttgcaac 1700 Query: 435 aaaggagctgaaggcagcaccccttactgcaagggccatggaggaggcaagcgctgctta 494 |||||||||||||||||||| | | ||||||||||| || ||||||||||| |||||| Sbjct: 1701 aaaggagctgaaggcagcactctcttttgcaagggccacggtggaggcaagcgatgctta 1760 Query: 495 tttgagggtggtggagtgtgccccaagagcgtgcatggcgggacgcagtactgtgttgcg 554 ||| |||||||||| |||||||| ||||||||||||||||| || || ||||||||||| Sbjct: 1761 tttcagggtggtggtgtgtgcccgaagagcgtgcatggcggaactcaatactgtgttgct 1820 Query: 555 cacggtggtggcaagaggtgcgctatttctgattgcaccaagagtgctagagggcggacg 614 || |||||||| |||||||| |||||||||| |||||||||||||||||||||||| || Sbjct: 1821 catggtggtgggaagaggtgtgctatttctggttgcaccaagagtgctagagggcgtaca 1880 Query: 615 gagtactgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagt 674 |||||||||||||||||||| ||||||||||| |||| ||| || |||| | ||||||| Sbjct: 1881 gagtactgcgtgcgccatggaggtggcaagaggtgcaagtttgagggctgcgcgaagagt 1940 Query: 675 gcacangggagcactgatttctgcaaggcgcatgg 709 || || |||||||| |||||||||||||| ||||| Sbjct: 1941 gcgcaggggagcaccgatttctgcaaggctcatgg 1975 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 384 ttctgcaaggcacatggtggaggcaagcgctgc 416 ||||||||||| ||||||||||| ||||||||| Sbjct: 1959 ttctgcaaggctcatggtggaggtaagcgctgc 1991
>dbj|AK062141.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G04, full insert sequence Length = 1357 Score = 617 bits (311), Expect = e-173 Identities = 545/624 (87%) Strand = Plus / Plus Query: 86 ttgcaaggcccatggtggagggaggagatgtgagtttcttggatgtacaaagagcgctga 145 ||||||||||||||||||||| |||||||| | ||||||||||| |||||||| || || Sbjct: 1 ttgcaaggcccatggtggaggaaggagatgccaatttcttggatgcacaaagagtgccga 60 Query: 146 aggacgcaccgaccactgcattgcccatggtggtggccgccggtgcagtaatgatggctg 205 ||| ||||| |||||||| || || ||||||||||| ||||| |||||| ||||||| || Sbjct: 61 agggcgcacagaccactgtatagctcatggtggtggtcgccgctgcagtcatgatggttg 120 Query: 206 ctcccgtgctgcccgaggaagatctggcttatgcatcaggcatggtggtggaaaaaggtg 265 ||||| ||||| || || | ||||||||| |||||||||||||| ||||| ||||| || Sbjct: 121 ttcccgggctgcacgtggcaaatctggcttgtgcatcaggcatggaggtggcaaaagatg 180 Query: 266 tcagcaggagaagtgcaccaagagcgcagaaggtcattctggcctctgcatctctcatgg 325 |||| ||||||| || | || |||||| ||||||||||| ||| |||||||||||||||| Sbjct: 181 tcagaaggagaactgtatcaggagcgccgaaggtcattcaggcttctgcatctctcatgg 240 Query: 326 gggtgggaggcgttgccagtttccagaatgtgcaaagggtgcacagggaagcacaaagtt 385 |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| Sbjct: 241 gggtgggaggcgttgccaatttccagaatgcacgaagggtgcacagggaagcacaaagtt 300 Query: 386 ctgcaaggcacatggtggaggcaagcgctgcactttcttgggctgtaccaaaggagctga 445 ||||||||| ||||||||||| ||||| ||||| |||| ||| || | |||||||||||| Sbjct: 301 ctgcaaggcgcatggtggaggaaagcgatgcacattctcgggttgcaacaaaggagctga 360 Query: 446 aggcagcaccccttactgcaagggccatggaggaggcaagcgctgcttatttgagggtgg 505 ||||||||| | | ||||||||||| || ||||||||||| ||||||||| ||||||| Sbjct: 361 aggcagcactctcttttgcaagggccacggtggaggcaagcgatgcttatttcagggtgg 420 Query: 506 tggagtgtgccccaagagcgtgcatggcgggacgcagtactgtgttgcgcacggtggtgg 565 ||| |||||||| ||||||||||||||||| || || ||||||||||| || |||||||| Sbjct: 421 tggtgtgtgcccgaagagcgtgcatggcggaactcaatactgtgttgctcatggtggtgg 480 Query: 566 caagaggtgcgctatttctgattgcaccaagagtgctagagggcggacggagtactgcgt 625 |||||||| |||||||||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 481 gaagaggtgtgctatttctggttgcaccaagagtgctagagggcgtacagagtactgcgt 540 Query: 626 gcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagtgcacangggag 685 ||||||||| ||||||||||| |||| ||| || |||| | ||||||||| || ||||| Sbjct: 541 gcgccatggaggtggcaagaggtgcaagtttgagggctgcgcgaagagtgcgcaggggag 600 Query: 686 cactgatttctgcaaggcgcatgg 709 ||| |||||||||||||| ||||| Sbjct: 601 caccgatttctgcaaggctcatgg 624 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 384 ttctgcaaggcacatggtggaggcaagcgctgc 416 ||||||||||| ||||||||||| ||||||||| Sbjct: 608 ttctgcaaggctcatggtggaggtaagcgctgc 640
>gb|BT013443.1| Lycopersicon esculentum clone 132098R, mRNA sequence Length = 2777 Score = 73.8 bits (37), Expect = 7e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 129 tgtacaaagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggccgccgg 188 |||||||||||||| ||||||||||||||| |||||||| ||||| ||||| || || Sbjct: 1494 tgtacaaagagcgcggaaggacgcaccgacttttgcattgcgcatgggggtggacgtcgt 1553 Query: 189 tgcagtaatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatcaggcat 248 |||||| |||| || ||| ||||||||| |||| | ||||| |||||||| ||||| Sbjct: 1554 tgcagtcatgaaggatgcagccgtgctgcaagagggaagtctggattatgcattcggcat 1613 Query: 249 ggtgg 253 ||||| Sbjct: 1614 ggtgg 1618 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/74 (82%) Strand = Plus / Plus Query: 627 cgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagtgcacangggagc 686 |||||||||||||| || ||||||| | || |||||| ||| ||||| || || ||| Sbjct: 1992 cgccatggtggtggaaaaagatgcaaagttgatggctgtgggaaaagtgctcagggaagc 2051 Query: 687 actgatttctgcaa 700 |||||||||||||| Sbjct: 2052 actgatttctgcaa 2065
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 123 cttggatgtacaaagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggc 182 |||||||| ||||||||||||||||| ||||| || |||||| |||||||| |||||| Sbjct: 18971481 cttggatgcacaaagagcgctgaaggccgcacagatttctgcatagcccatggaggtggc 18971540 Query: 183 cgccg 187 ||||| Sbjct: 18971541 cgccg 18971545 Score = 52.0 bits (26), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 669 aagagtgcacangggagcactgatttctgcaaggcgcatgggggaagcaaacgctgc 725 ||||||||||| ||||| || || || |||||||| ||||||||| | ||||||||| Sbjct: 18972018 aagagtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 18972074 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgc 416 |||||||||| || ||| | || |||||||||||||| ||||| || |||||| Sbjct: 18972022 gtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 18972074
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 123 cttggatgtacaaagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggc 182 |||||||| ||||||||||||||||| ||||| || |||||| |||||||| |||||| Sbjct: 137046 cttggatgcacaaagagcgctgaaggccgcacagatttctgcatagcccatggaggtggc 137105 Query: 183 cgccg 187 ||||| Sbjct: 137106 cgccg 137110 Score = 52.0 bits (26), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 669 aagagtgcacangggagcactgatttctgcaaggcgcatgggggaagcaaacgctgc 725 ||||||||||| ||||| || || || |||||||| ||||||||| | ||||||||| Sbjct: 137583 aagagtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 137639 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgc 416 |||||||||| || ||| | || |||||||||||||| ||||| || |||||| Sbjct: 137587 gtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 137639
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 123 cttggatgtacaaagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggc 182 |||||||| ||||||||||||||||| ||||| || |||||| |||||||| |||||| Sbjct: 64151 cttggatgcacaaagagcgctgaaggccgcacagatttctgcatagcccatggaggtggc 64210 Query: 183 cgccg 187 ||||| Sbjct: 64211 cgccg 64215 Score = 52.0 bits (26), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 669 aagagtgcacangggagcactgatttctgcaaggcgcatgggggaagcaaacgctgc 725 ||||||||||| ||||| || || || |||||||| ||||||||| | ||||||||| Sbjct: 64688 aagagtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 64744 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgc 416 |||||||||| || ||| | || |||||||||||||| ||||| || |||||| Sbjct: 64692 gtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 64744
>dbj|AK119245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C03, full insert sequence Length = 1668 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 123 cttggatgtacaaagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggc 182 |||||||| ||||||||||||||||| ||||| || |||||| |||||||| |||||| Sbjct: 373 cttggatgcacaaagagcgctgaaggccgcacagatttctgcatagcccatggaggtggc 432 Query: 183 cgccg 187 ||||| Sbjct: 433 cgccg 437 Score = 52.0 bits (26), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 669 aagagtgcacangggagcactgatttctgcaaggcgcatgggggaagcaaacgctgc 725 ||||||||||| ||||| || || || |||||||| ||||||||| | ||||||||| Sbjct: 910 aagagtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 966 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgc 416 |||||||||| || ||| | || |||||||||||||| ||||| || |||||| Sbjct: 914 gtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 966
>dbj|AK105107.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F03, full insert sequence Length = 1668 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 123 cttggatgtacaaagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggc 182 |||||||| ||||||||||||||||| ||||| || |||||| |||||||| |||||| Sbjct: 373 cttggatgcacaaagagcgctgaaggccgcacagatttctgcatagcccatggaggtggc 432 Query: 183 cgccg 187 ||||| Sbjct: 433 cgccg 437 Score = 52.0 bits (26), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 669 aagagtgcacangggagcactgatttctgcaaggcgcatgggggaagcaaacgctgc 725 ||||||||||| ||||| || || || |||||||| ||||||||| | ||||||||| Sbjct: 910 aagagtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 966 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgc 416 |||||||||| || ||| | || |||||||||||||| ||||| || |||||| Sbjct: 914 gtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 966
>dbj|AK062190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E09, full insert sequence Length = 1861 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 123 cttggatgtacaaagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggc 182 |||||||| ||||||||||||||||| ||||| || |||||| |||||||| |||||| Sbjct: 508 cttggatgcacaaagagcgctgaaggccgcacagatttctgcatagcccatggaggtggc 567 Query: 183 cgccg 187 ||||| Sbjct: 568 cgccg 572 Score = 52.0 bits (26), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 669 aagagtgcacangggagcactgatttctgcaaggcgcatgggggaagcaaacgctgc 725 ||||||||||| ||||| || || || |||||||| ||||||||| | ||||||||| Sbjct: 1045 aagagtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 1101 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgc 416 |||||||||| || ||| | || |||||||||||||| ||||| || |||||| Sbjct: 1049 gtgcacaggggagtacagacttttgcaaggcacatgggggaggtaaacgctgc 1101
>gb|AY107463.1| Zea mays PCO144444 mRNA sequence Length = 923 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/77 (84%) Strand = Plus / Plus Query: 633 ggtggtggcaagagatgcangttcgacngctgtgtgaagagtgcacangggagcactgat 692 |||||||||||| | |||| |||||| | |||| ||||| ||||| ||||||||||| Sbjct: 64 ggtggtggcaagcgttgcaggttcgatgggtgtgacaagagcgcacaggggagcactgac 123 Query: 693 ttctgcaaggcgcatgg 709 ||||||||||| ||||| Sbjct: 124 ttctgcaaggctcatgg 140
>gb|U77939.1|PVU77939 Phaseolus vulgaris ubiquitin-like protein mRNA, complete cds Length = 1399 Score = 63.9 bits (32), Expect = 7e-07 Identities = 140/176 (79%) Strand = Plus / Plus Query: 123 cttggatgtacaaagagcgctgaaggacgcaccgaccactgcattgcccatggtggtggc 182 ||||| || |||||||| || |||||||| || || ||| |||||||||||||||||| Sbjct: 1 cttggttgcacaaagagtgcagaaggacgtacagatttctgtattgcccatggtggtggc 60 Query: 183 cgccggtgcagtaatgatggctgctcccgtgctgcccgaggaagatctggcttatgcatc 242 || | |||||| |||| ||||| |||| ||||| |||| | |||||| || |||||| Sbjct: 61 cggagatgcagtcatgaaggctgtacccgggctgctagagggaaatctggattgtgcatc 120 Query: 243 aggcatggtggtggaaaaaggtgtcagcaggagaagtgcaccaagagcgcagaagg 298 | ||||||||||| || ||||| ||| || || ||||||||||| || ||||| Sbjct: 121 cgacatggtggtggcaagaggtgccagagagaaaactgcaccaagagtgctgaagg 176
>ref|XM_474063.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1914 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/90 (82%) Strand = Plus / Plus Query: 620 ctgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagtgcaca 679 ||||||| | ||||||||||||||| | |||| | | ||| | || | |||||||| || Sbjct: 1362 ctgcgtgaggcatggtggtggcaagcgttgcaaggttgacggttgcgacaagagtgctca 1421 Query: 680 ngggagcactgatttctgcaaggcgcatgg 709 |||||||| || ||||||||||||||||| Sbjct: 1422 ggggagcacggacttctgcaaggcgcatgg 1451
>ref|XM_464880.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2599 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcg 412 |||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 1896 gtgcacagggaagcactaacttttgcaaggcacatggaggcggcaagcg 1944
>ref|XM_464881.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2368 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcg 412 |||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 1638 gtgcacagggaagcactaacttttgcaaggcacatggaggcggcaagcg 1686
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/90 (82%) Strand = Plus / Plus Query: 620 ctgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagtgcaca 679 ||||||| | ||||||||||||||| | |||| | | ||| | || | |||||||| || Sbjct: 1210 ctgcgtgaggcatggtggtggcaagcgttgcaaggttgacggttgcgacaagagtgctca 1269 Query: 680 ngggagcactgatttctgcaaggcgcatgg 709 |||||||| || ||||||||||||||||| Sbjct: 1270 ggggagcacggacttctgcaaggcgcatgg 1299
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/90 (82%) Strand = Plus / Plus Query: 620 ctgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagtgcaca 679 ||||||| | ||||||||||||||| | |||| | | ||| | || | |||||||| || Sbjct: 36796 ctgcgtgaggcatggtggtggcaagcgttgcaaggttgacggttgcgacaagagtgctca 36855 Query: 680 ngggagcactgatttctgcaaggcgcatgg 709 |||||||| || ||||||||||||||||| Sbjct: 36856 ggggagcacggacttctgcaaggcgcatgg 36885
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/90 (82%) Strand = Plus / Plus Query: 620 ctgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagtgcaca 679 ||||||| | ||||||||||||||| | |||| | | ||| | || | |||||||| || Sbjct: 32641775 ctgcgtgaggcatggtggtggcaagcgttgcaaggttgacggttgcgacaagagtgctca 32641834 Query: 680 ngggagcactgatttctgcaaggcgcatgg 709 |||||||| || ||||||||||||||||| Sbjct: 32641835 ggggagcacggacttctgcaaggcgcatgg 32641864 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 161 ctgcattgcccatggtggtggccgccggtgc 191 ||||||| | ||||||||||||||||||||| Sbjct: 22866329 ctgcatttctcatggtggtggccgccggtgc 22866359 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 554 gcacggtggtggcaagaggtgc 575 |||||||||||||||||||||| Sbjct: 22866647 gcacggtggtggcaagaggtgc 22866668
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcg 412 |||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 8984449 gtgcacagggaagcactaacttttgcaaggcacatggaggcggcaagcg 8984401 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 cagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgcac 418 ||||| ||||| ||||||||||||| || || || |||||||||||||| Sbjct: 22119405 caggggagcacggagttctgcaaggcccacggcggcggcaagcgctgcac 22119454
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcg 412 |||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 24895 gtgcacagggaagcactaacttttgcaaggcacatggaggcggcaagcg 24847
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcg 412 |||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 57058 gtgcacagggaagcactaacttttgcaaggcacatggaggcggcaagcg 57010
>dbj|AK100409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H04, full insert sequence Length = 2595 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcg 412 |||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 1892 gtgcacagggaagcactaacttttgcaaggcacatggaggcggcaagcg 1940
>dbj|AK068099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134G20, full insert sequence Length = 2365 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 364 gtgcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcg 412 |||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 1636 gtgcacagggaagcactaacttttgcaaggcacatggaggcggcaagcg 1684
>dbj|AK062582.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C11, full insert sequence Length = 2274 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/90 (82%) Strand = Plus / Plus Query: 620 ctgcgtgcgccatggtggtggcaagagatgcangttcgacngctgtgtgaagagtgcaca 679 ||||||| | ||||||||||||||| | |||| | | ||| | || | |||||||| || Sbjct: 1494 ctgcgtgaggcatggtggtggcaagcgttgcaaggttgacggttgcgacaagagtgctca 1553 Query: 680 ngggagcactgatttctgcaaggcgcatgg 709 |||||||| || ||||||||||||||||| Sbjct: 1554 ggggagcacggacttctgcaaggcgcatgg 1583
>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete sequence Length = 50928 Score = 52.0 bits (26), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Plus Query: 669 aagagtgcacangggagcactgatttctgcaaggcgcatgg 709 |||||||| || |||||||| || ||||||||||||||||| Sbjct: 17909 aagagtgctcaggggagcacggacttctgcaaggcgcatgg 17949
>ref|NM_117272.2| Arabidopsis thaliana WRKY19; transcription factor AT4G12020 (WRKY19) mRNA, complete cds Length = 5567 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 37 gatgccagaaagctggttgccagaagggtgctgaagg 73 ||||||||||| ||| |||||||||||| |||||||| Sbjct: 350 gatgccagaaacctgattgccagaagggagctgaagg 386
>emb|AL161533.2|ATCHRIV33 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 33 Length = 190026 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 37 gatgccagaaagctggttgccagaagggtgctgaagg 73 ||||||||||| ||| |||||||||||| |||||||| Sbjct: 59300 gatgccagaaacctgattgccagaagggagctgaagg 59336
>emb|AL049638.1|ATF16J13 Arabidopsis thaliana DNA chromosome 4, BAC clone F16J13 (ESSA project) Length = 107600 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 37 gatgccagaaagctggttgccagaagggtgctgaagg 73 ||||||||||| ||| |||||||||||| |||||||| Sbjct: 35470 gatgccagaaacctgattgccagaagggagctgaagg 35506
>ref|NM_125851.3| Arabidopsis thaliana unknown protein AT5G64550 mRNA, complete cds Length = 2533 Score = 48.1 bits (24), Expect = 0.041 Identities = 41/47 (87%) Strand = Plus / Plus Query: 663 tgtgtgaagagtgcacangggagcactgatttctgcaaggcgcatgg 709 |||| ||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 1710 tgtgagaagagtgcgcaaggtagcactgatttctgtaaggcacatgg 1756
>gb|AY142673.1| Arabidopsis thaliana unknown protein (At5g64550) mRNA, complete cds Length = 1936 Score = 48.1 bits (24), Expect = 0.041 Identities = 41/47 (87%) Strand = Plus / Plus Query: 663 tgtgtgaagagtgcacangggagcactgatttctgcaaggcgcatgg 709 |||| ||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 1348 tgtgagaagagtgcgcaaggtagcactgatttctgtaaggcacatgg 1394
>gb|AY090946.1| Arabidopsis thaliana unknown protein (At5g64550) mRNA, complete cds Length = 2549 Score = 48.1 bits (24), Expect = 0.041 Identities = 41/47 (87%) Strand = Plus / Plus Query: 663 tgtgtgaagagtgcacangggagcactgatttctgcaaggcgcatgg 709 |||| ||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 1710 tgtgagaagagtgcgcaaggtagcactgatttctgtaaggcacatgg 1756
>dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUB3 Length = 82188 Score = 48.1 bits (24), Expect = 0.041 Identities = 41/47 (87%) Strand = Plus / Minus Query: 663 tgtgtgaagagtgcacangggagcactgatttctgcaaggcgcatgg 709 |||| ||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 21519 tgtgagaagagtgcgcaaggtagcactgatttctgtaaggcacatgg 21473
>ref|XM_472737.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2172 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 161 ctgcattgcccatggtggtggccgccggtgc 191 ||||||| | ||||||||||||||||||||| Sbjct: 1338 ctgcatttctcatggtggtggccgccggtgc 1368 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 554 gcacggtggtggcaagaggtgc 575 |||||||||||||||||||||| Sbjct: 1656 gcacggtggtggcaagaggtgc 1677
>gb|BT019138.1| Zea mays clone Contig782.F mRNA sequence Length = 1299 Score = 46.1 bits (23), Expect = 0.16 Identities = 40/46 (86%) Strand = Plus / Plus Query: 661 gctgtgtgaagagtgcacangggagcactgatttctgcaaggcgca 706 |||||| |||||| ||||| || ||||| |||||||||||| |||| Sbjct: 517 gctgtgggaagagcgcacagggaagcaccgatttctgcaagtcgca 562 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Plus Query: 366 gcacagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctg 415 |||||||||||||| | ||||||||| | || |||||||||| |||||| Sbjct: 531 gcacagggaagcaccgatttctgcaagtcgcacggtggaggcaggcgctg 580
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 161 ctgcattgcccatggtggtggccgccggtgc 191 ||||||| | ||||||||||||||||||||| Sbjct: 75104 ctgcatttctcatggtggtggccgccggtgc 75134 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 554 gcacggtggtggcaagaggtgc 575 |||||||||||||||||||||| Sbjct: 75422 gcacggtggtggcaagaggtgc 75443
>dbj|AK101398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037C08, full insert sequence Length = 2644 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 161 ctgcattgcccatggtggtggccgccggtgc 191 ||||||| | ||||||||||||||||||||| Sbjct: 1579 ctgcatttctcatggtggtggccgccggtgc 1609 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 554 gcacggtggtggcaagaggtgc 575 |||||||||||||||||||||| Sbjct: 1897 gcacggtggtggcaagaggtgc 1918
>dbj|AK060226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-G08, full insert sequence Length = 1722 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 161 ctgcattgcccatggtggtggccgccggtgc 191 ||||||| | ||||||||||||||||||||| Sbjct: 657 ctgcatttctcatggtggtggccgccggtgc 687 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 554 gcacggtggtggcaagaggtgc 575 |||||||||||||||||||||| Sbjct: 975 gcacggtggtggcaagaggtgc 996
>ref|XM_466391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2634 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 cagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgcac 418 ||||| ||||| ||||||||||||| || || || |||||||||||||| Sbjct: 1914 caggggagcacggagttctgcaaggcccacggcggcggcaagcgctgcac 1963
>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0703B01 Length = 137445 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 cagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgcac 418 ||||| ||||| ||||||||||||| || || || |||||||||||||| Sbjct: 93304 caggggagcacggagttctgcaaggcccacggcggcggcaagcgctgcac 93353
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 cagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgcac 418 ||||| ||||| ||||||||||||| || || || |||||||||||||| Sbjct: 15249 caggggagcacggagttctgcaaggcccacggcggcggcaagcgctgcac 15298
>dbj|AK105763.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D10, full insert sequence Length = 2635 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 cagggaagcacaaagttctgcaaggcacatggtggaggcaagcgctgcac 418 ||||| ||||| ||||||||||||| || || || |||||||||||||| Sbjct: 1914 caggggagcacggagttctgcaaggcccacggcggcggcaagcgctgcac 1963
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 catggtggtggccgccggtgc 191 ||||||||||||||||||||| Sbjct: 3490448 catggtggtggccgccggtgc 3490428
>gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome 16, complete sequence Length = 244730 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 gtaccaaaggagctgaaggca 450 ||||||||||||||||||||| Sbjct: 232199 gtaccaaaggagctgaaggca 232179
>emb|BX933386.1| Gallus gallus finished cDNA, clone ChEST695k23 Length = 1217 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 agaagggtgctgaaggaaggaccat 82 |||||||||||||| |||||||||| Sbjct: 1198 agaagggtgctgaaagaaggaccat 1174
>gb|AC166047.6| Mus musculus chromosome 18, clone wi1-1600J1, complete sequence Length = 42185 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cattgcccatggtggtggcc 183 |||||||||||||||||||| Sbjct: 10895 cattgcccatggtggtggcc 10876
>gb|AC133876.8| Mus musculus chromosome 5, clone RP23-190E15, complete sequence Length = 187088 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 tgtaccaaaggagctgaagg 448 |||||||||||||||||||| Sbjct: 81055 tgtaccaaaggagctgaagg 81074
>gb|AC074389.8| Homo sapiens BAC clone RP11-510K8 from 7, complete sequence Length = 195782 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cccatggtggagggaggagatgtg 117 ||||||||||||||||| |||||| Sbjct: 36241 cccatggtggagggaggtgatgtg 36264
>emb|AL354694.18| Human DNA sequence from clone RP11-77E14 on chromosome 9 Contains a novel gene, complete sequence Length = 153324 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 caggcatggtggtggaaaaa 261 |||||||||||||||||||| Sbjct: 66243 caggcatggtggtggaaaaa 66262
>emb|AL928625.5| Mouse DNA sequence from clone RP24-528P17 on chromosome 4, complete sequence Length = 170639 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 cttactgcaagggccatggaggag 480 |||||||| ||||||||||||||| Sbjct: 150179 cttactgctagggccatggaggag 150202
>gb|AC079127.28| Homo sapiens 12 BAC RP11-143P3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138000 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 atgggggtgggaggcgttgc 341 |||||||||||||||||||| Sbjct: 83346 atgggggtgggaggcgttgc 83365
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 gtgttgcgcacggtggtggc 566 |||||||||||||||||||| Sbjct: 40253 gtgttgcgcacggtggtggc 40272 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,441,732 Number of Sequences: 3902068 Number of extensions: 6441732 Number of successful extensions: 175353 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 174665 Number of HSP's gapped (non-prelim): 627 length of query: 725 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 702 effective length of database: 17,143,297,704 effective search space: 12034594988208 effective search space used: 12034594988208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
