ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63p18 |
|---|---|
| Clone Library Name | barley_pub |
>HXD8_CHICK (P23459) Homeobox protein Hox-D8 (Chox-M)| Length = 188 Score = 37.7 bits (86), Expect = 0.027 Identities = 29/94 (30%), Positives = 37/94 (39%) Frame = +2 Query: 212 PTVADYFPLQQDLNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNEFYNGGWFPPQ* 391 P F QQ+ V PD S + H+NQSS + P W PQ Sbjct: 40 PERQQIFTTQQEAELVQYPDCKSSSANIGEEPDHLNQSSSPAQMFP--------WMRPQA 91 Query: 392 RPGRLNGRTACARKKADVPLVLAKRLMFRLYLQK 493 PGR GR +R + L L K +F YL + Sbjct: 92 APGRRRGRQTYSRFQT---LELEKEFLFNPYLTR 122
>HXD8_MOUSE (P23463) Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4)| Length = 289 Score = 37.7 bits (86), Expect = 0.027 Identities = 29/88 (32%), Positives = 37/88 (42%) Frame = +2 Query: 230 FPLQQDLNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNEFYNGGWFPPQ*RPGRLN 409 F QQ+ V PD S + + H+NQSS S P W PQ PGR Sbjct: 146 FTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQMFP--------WMRPQAAPGRRR 197 Query: 410 GRTACARKKADVPLVLAKRLMFRLYLQK 493 GR +R + L L K +F YL + Sbjct: 198 GRQTYSRFQT---LELEKEFLFNPYLTR 222
>HXD8_HUMAN (P13378) Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4)| Length = 290 Score = 37.7 bits (86), Expect = 0.027 Identities = 29/88 (32%), Positives = 37/88 (42%) Frame = +2 Query: 230 FPLQQDLNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNEFYNGGWFPPQ*RPGRLN 409 F QQ+ V PD S + + H+NQSS S P W PQ PGR Sbjct: 148 FTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQMFP--------WMRPQAAPGRRR 199 Query: 410 GRTACARKKADVPLVLAKRLMFRLYLQK 493 GR +R + L L K +F YL + Sbjct: 200 GRQTYSRFQT---LELEKEFLFNPYLTR 224
>INO80_EMENI (Q5BAZ5) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1612 Score = 37.4 bits (85), Expect = 0.035 Identities = 38/119 (31%), Positives = 50/119 (42%), Gaps = 15/119 (12%) Frame = +2 Query: 44 PQYAPTPEP-ALPPQAAVPGDAADPSGFALPLFG--NSWSDPCIEF---AFKTLTGDIPV 205 P Y+ EP A PP+ A P AADP FA L G + P I+ T+ +P Sbjct: 157 PAYSVMREPQASPPKEAKPARAADPMSFASILSGPTEEQAPPKIQSPTPGLGTIHSAVPA 216 Query: 206 -----LNPTVADYFPLQQDLNKV----APPDYSDPSVDDTRNHTHVNQSSHHSAPRPSN 355 LNP A + P D+ V AP PS D + +T + SA P+N Sbjct: 217 ANATSLNPPPASFHPKVGDIEPVPPVSAPRLEKKPSADKRQRNT--EKEDLKSAENPTN 273
>POLR_TYMVC (P28477) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1844 Score = 36.2 bits (82), Expect = 0.078 Identities = 41/140 (29%), Positives = 53/140 (37%), Gaps = 26/140 (18%) Frame = +2 Query: 8 TAPFATSSANVEPQYAPTPEPALPPQAAVPG------DAADPSGFALPLFGNSWSDPCIE 169 TAP S A++ P +A T P PP A+ PG AA P+ + SD +E Sbjct: 582 TAPPDRSEASLPPAFASTFVPRPPPAASSPGAQPPTTTAAPPTPIEPTQRAHQNSDLALE 641 Query: 170 FAFKT-----------LTGDIPVLNPTV------ADYFPLQQDLNKV-APPDYSDPSVDD 295 + T +T PVL P + P DL PP S P D Sbjct: 642 SSTSTEPPPPPIRSPDMTPSAPVLFPEINSPRRFPPQLPATPDLEPAHTPPPLSIPHQDP 701 Query: 296 TRNHTHVNQSS--HHSAPRP 349 T + + S HHS P P Sbjct: 702 TDSVDPLMGSHLLHHSLPAP 721
>HXD8_HETFR (Q9IA12) Homeobox protein Hox-D8| Length = 240 Score = 35.8 bits (81), Expect = 0.10 Identities = 27/88 (30%), Positives = 37/88 (42%) Frame = +2 Query: 230 FPLQQDLNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNEFYNGGWFPPQ*RPGRLN 409 F QQ+ + V PD S + H+NQ+S + P W PQ PGR Sbjct: 98 FTTQQEADLVQYPDCKSSSSNIGEEPEHLNQNSSPTQMFP--------WMRPQAAPGRRR 149 Query: 410 GRTACARKKADVPLVLAKRLMFRLYLQK 493 GR +R + L L K +F YL + Sbjct: 150 GRQTYSRFQT---LELEKEFLFNPYLTR 174
>POLR_TYMV (P10358) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1844 Score = 35.8 bits (81), Expect = 0.10 Identities = 41/140 (29%), Positives = 53/140 (37%), Gaps = 26/140 (18%) Frame = +2 Query: 8 TAPFATSSANVEPQYAPTPEPALPPQAAVPG------DAADPSGFALPLFGNSWSDPCIE 169 TAP S A++ P +A T P PP A+ PG AA P+ + SD +E Sbjct: 582 TAPPDRSEASLPPAFASTFVPRPPPAASSPGAQPPTTTAAPPTPIEPTQRTHQNSDLALE 641 Query: 170 FAFKT-----------LTGDIPVLNPTV------ADYFPLQQDLNKV-APPDYSDPSVDD 295 + T +T PVL P + P DL PP S P D Sbjct: 642 SSTSTEPPPPPIRSPDMTPSAPVLFPEINSPRRFPPQLPATPDLEPAHTPPPLSIPHQDP 701 Query: 296 TRNHTHVNQSS--HHSAPRP 349 T + + S HHS P P Sbjct: 702 TDSADPLMGSHLLHHSLPAP 721
>C49A1_DROME (Q9V5L3) Probable cytochrome P450 49a1 (EC 1.14.-.-) (CYPXLIXA1)| Length = 589 Score = 33.5 bits (75), Expect = 0.51 Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 1/117 (0%) Frame = +2 Query: 23 TSSANVEPQYAPTPEPALPPQAAVPGDAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIP 202 T+++++ + +P A+ P + VPG + LPL GNSW + +K D Sbjct: 80 TTASSLPAETTSSPAAAVRPYSEVPGP------YPLPLIGNSWRFAPLIGTYKISDLD-K 132 Query: 203 VLNPTVADYFPLQQDLNKVAPPDYSDP-SVDDTRNHTHVNQSSHHSAPRPSNEFYNG 370 V+N +Y + + + PD D+ RN ++ H PS Y G Sbjct: 133 VMNELHVNYGKMAKVGGLIGHPDLLFVFDGDEIRNIFKKEEAMPHRPSMPSLRHYKG 189
>VE7_RHPV1 (P22161) Protein E7| Length = 113 Score = 32.3 bits (72), Expect = 1.1 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = +2 Query: 185 LTGDIPVLNPTVADY--FPLQQDLNKVAPPDYSDPSVD-DTRNHTHVNQSSHHSAPRP 349 + G P L V D FP Q ++ + SD S D D +H H NQ HH RP Sbjct: 1 MIGPKPTLEDIVLDLQPFPQPQPVDLMCYEQLSDSSEDEDEVDHHHNNQQQHHQHARP 58
>BCAR1_RAT (Q63767) Breast cancer anti-estrogen resistance protein 1| (CRK-associated substrate) (p130cas) Length = 968 Score = 32.3 bits (72), Expect = 1.1 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 1/105 (0%) Frame = +2 Query: 53 APTP-EPALPPQAAVPGDAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIPVLNPTVADY 229 AP P PA PPQ + P G P+ S P + A++ ++ L PT + Sbjct: 167 APGPGPPATPPQP----QPSLPQGVHTPVPPASQYSPMLPTAYQPQPDNV-YLVPTPSK- 220 Query: 230 FPLQQDLNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNEFY 364 QQ L + P+ S + T Q+ HHS P P+ + Y Sbjct: 221 --TQQGLYQAPGPNPQFQSPPAKQTSTFSKQTPHHSFPSPATDLY 263
>KLF13_MOUSE (Q9JJZ6) Krueppel-like factor 13 (Transcription factor BTEB3)| (Basic transcription element-binding protein 3) (BTE-binding protein 3) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Erythroid transcription factor FKLF-2) Length = 289 Score = 26.9 bits (58), Expect(2) = 1.3 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 44 PQYAPTPEPALPPQAAVPGDAADPSGFALPLFGNSWSDP 160 P P PEPA P QA P AA PS +WS+P Sbjct: 102 PAPPPGPEPASPGQAGAP--AAPPS--------PAWSEP 130 Score = 23.9 bits (50), Expect(2) = 1.3 Identities = 8/30 (26%), Positives = 14/30 (46%) Frame = +1 Query: 154 RSMHRVRIQDPHRRHPCSESNCRGLLSSSA 243 R R ++ P R+H C + C + S+ Sbjct: 154 RGRSRADLESPQRKHKCHYAGCEKVYGKSS 183
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 32.0 bits (71), Expect = 1.5 Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 4/110 (3%) Frame = +2 Query: 41 EPQYAPTPEPALPPQAAV----PGDAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIPVL 208 +P APTP+ A PPQA PG A+ P K + G P Sbjct: 595 QPPQAPTPQAAAPPQATTPQPSPGLASSPE--------------------KIVLGQPPSA 634 Query: 209 NPTVADYFPLQQDLNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNE 358 PT Q L P + S + H V S SAP P+ + Sbjct: 635 TPTA---ILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQD 681
>RX_HUMAN (Q9Y2V3) Retinal homeobox protein Rx (Retina and anterior neural| fold homeobox protein) Length = 346 Score = 32.0 bits (71), Expect = 1.5 Identities = 29/90 (32%), Positives = 34/90 (37%), Gaps = 16/90 (17%) Frame = +2 Query: 62 PEPALPPQAAVPGDAADPSGFALPLFGNSWSDPCI----EFAFKTLTGDIPVLNPTVADY 229 P L P A PG P+G ALPL SW P + A ++L G P A Y Sbjct: 217 PSATLSPLGAGPGSGGGPAGGALPL--ESWLGPPLPGGGATALQSLPGFGPPAQSLPASY 274 Query: 230 F------------PLQQDLNKVAPPDYSDP 283 PL L +APP S P Sbjct: 275 TPPPPPPPFLNSPPLGPGLQPLAPPPPSYP 304
>KIF3C_HUMAN (O14782) Kinesin-like protein KIF3C| Length = 793 Score = 32.0 bits (71), Expect = 1.5 Identities = 22/67 (32%), Positives = 31/67 (46%) Frame = -3 Query: 201 GMSPVRVLNANSMHGSDHEFPNNGRANPDGSAASPGTAACGGKAGSGVGAYWGSTFAEEV 22 G +RV N + + E N N G AA+P + GG GSG GA G +E Sbjct: 233 GQDHIRVGKLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGGGA--GGERPKEA 290 Query: 21 AKGAVSI 1 +K +S+ Sbjct: 291 SKINLSL 297
>BCAR1_MOUSE (Q61140) Breast cancer anti-estrogen resistance protein 1| (CRK-associated substrate) (p130cas) Length = 874 Score = 32.0 bits (71), Expect = 1.5 Identities = 27/99 (27%), Positives = 42/99 (42%) Frame = +2 Query: 68 PALPPQAAVPGDAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIPVLNPTVADYFPLQQD 247 PA PPQ + P G P+ S P + A++ + ++ L PT + QQ Sbjct: 79 PATPPQP----QPSLPQGVHAPVPPASQYSPMLPTAYQPQSDNV-YLVPTPSK---TQQG 130 Query: 248 LNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNEFY 364 L + P+ S + T Q+ HHS P P+ + Y Sbjct: 131 LYQAPGPNPQFQSPPAKQTSTFSKQTPHHSFPSPATDLY 169
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 31.6 bits (70), Expect = 1.9 Identities = 32/113 (28%), Positives = 41/113 (36%), Gaps = 2/113 (1%) Frame = +2 Query: 53 APTPEPALPPQAAVPGDAADP-SGFALPLFG-NSWSDPCIEFAFKTLTGDIPVLNPTVAD 226 AP P P A PG A P SG P N+ SDP I+ + + P P Sbjct: 18 APAPAATPPSAGAAPGAATPPTSGPPTPNNNSNNGSDPSIQQQQQNVAPH-PYGAPPPPG 76 Query: 227 YFPLQQDLNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNEFYNGGWFPP 385 P P DP+ +H H Q H P + ++GG PP Sbjct: 77 SGP--------GGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQQQHHGGPAPP 121
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 31.6 bits (70), Expect = 1.9 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = +2 Query: 2 IDTAPFAT--SSANVEPQYAPTPEPALPP-QAAVPGDAADPSGFALP 133 +DT P A SS +EP+ P P P PP + A P PSG P Sbjct: 1086 VDTQPAAQKESSQTIEPKRPPPPRPVAPPARPAPPQRPPPPSGARSP 1132
>CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)| Length = 1655 Score = 31.6 bits (70), Expect = 1.9 Identities = 41/142 (28%), Positives = 56/142 (39%), Gaps = 23/142 (16%) Frame = +2 Query: 44 PQYAPTPEPALPPQAAVPGDAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIPVLNPTV- 220 P A P A PP +A P +A P G A P +S+ PC P LNP + Sbjct: 387 PGSAAPPGSAAPPGSAAPPGSAAPPGSAAP---HSFHSPCAS------APPHPGLNPRIQ 437 Query: 221 ADYFPLQQDLN--------KVAPP--DYSDPSVDD-----------TRNHTHVNQSSHHS 337 A F Q + N +PP D S S D+ T+ + + Sbjct: 438 AARFRFQGNANDPDQNGNTTPSPPSRDVSPTSRDNLVAKQLARNTVTQALSRFTSPPAGA 497 Query: 338 APRP-SNEFYNGGWFPPQ*RPG 400 APRP ++ +GG +PP R G Sbjct: 498 APRPGASPTGDGGAYPPVGRTG 519
>COE4_HUMAN (Q9BQW3) Transcription factor COE4 (Early B-cell factor 4) (EBF-4)| (Olf-1/EBF-like 4) (OE-4) (O/E-4) Length = 644 Score = 31.2 bits (69), Expect = 2.5 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -3 Query: 222 ATVGFRTGMSPVRVLNANSMHGSDHEFPNN-GRANPDGSAASPGT--AACGGKAGSGVGA 52 A VG SP+ + ++ G + + + A+P G A SPG+ + GG G+G+G Sbjct: 526 AVVGINAFSSPLAIAVGDATPGPEPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAGLGG 585 Query: 51 Y 49 Y Sbjct: 586 Y 586
>PPIL2_ASPOR (Q2U5W8) Peptidyl-prolyl cis-trans isomerase-like 2 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) Length = 570 Score = 31.2 bits (69), Expect = 2.5 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -3 Query: 99 PGTAACGGKAGSGVGAYWGSTFAEEVAK 16 PG+ A GG AGSGVG Y + A + + Sbjct: 508 PGSTAAGGDAGSGVGKYLKAALANQTTQ 535
>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) (Phosphoprotein F1-20) Length = 901 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +2 Query: 20 ATSSANVEPQYAPTPEPALPPQAAVPGDAADPSGFALPLFG 142 AT SA V PQ P ++PP A P +GF +P G Sbjct: 800 ATWSAGVPPQGTVPPTSSVPPGAGAPSVGQPGAGFGMPPSG 840
>PI5K5_ARATH (Q9SLG9) Phosphatidylinositol-4-phosphate 5-kinase 5 (EC 2.7.1.68)| (AtPIP5K5) (1-phosphatidylinositol-4-phosphate kinase 5) (PtdIns(4)P-5-kinase 5) (Diphosphoinositide kinase 5) Length = 772 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 5/46 (10%) Frame = +2 Query: 257 VAPPDYSDPSVDDTRNHTHVNQSS-----HHSAPRPSNEFYNGGWF 379 VAP +D + DD + T N+SS H P+ ++Y G W+ Sbjct: 35 VAPHTDNDTTTDDNDDETTTNRSSLEEFYHAERVLPNGDYYTGQWY 80
>PALB_CRYNE (Q55IT8) Calpain-like protease palB/RIM13 (EC 3.4.22.-) (Cysteine| protease RIM13) Length = 814 Score = 30.8 bits (68), Expect = 3.3 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Frame = +2 Query: 101 DAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIPVLNPTVADYF--PLQQDLNKVAPPDY 274 D DP + F SW C EF L V+ T ++ P DL P Sbjct: 371 DIFDPGATS---FTMSWDQVCAEFEALHLNWKPSVMPNTATRHWSWPKPPDL-----PSD 422 Query: 275 SDPSVDDTRNHTHVNQSSHHSA 340 +DP + +TR HVN SS S+ Sbjct: 423 ADPGMMNTRYRLHVNASSPSSS 444
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = +2 Query: 2 IDTAPFAT--SSANVEPQYAPTPEPALPP-QAAVPGDAADPSGFALP 133 +DT P A SS +EP+ P P P PP + A P PSG P Sbjct: 1086 VDTQPAAQKDSSQTLEPKRPPPPRPVAPPARPAPPQRPPPPSGARSP 1132
>PARE_CAUCR (O54479) DNA topoisomerase 4 subunit B (EC 5.99.1.-) (Topoisomerase| IV subunit B) Length = 695 Score = 30.4 bits (67), Expect = 4.3 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Frame = +2 Query: 14 PFATSSANVEPQYAPTPEPALPP----QAAVPGD--AAD 112 P A A+VEP+ PTP P PP A+ PG+ AAD Sbjct: 21 PAAPFKASVEPRVEPTPRPIPPPPPSKTASAPGEYSAAD 59
>PQQF_KLEPN (P27508) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 761 Score = 30.0 bits (66), Expect = 5.6 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 11/85 (12%) Frame = +2 Query: 62 PEPALPPQAAVPGDAADPSGFALPLFGNSW-----SDPCIEFAF-KTLTGDIPVLNPTVA 223 P +L Q PG+ GF+LPL + W SDP + FAF GD+ P A Sbjct: 377 PSVSLACQTVSPGEPVATQGFSLPL--SRWRRRPESDPALAFAFYPQAAGDLVAKCPEKA 434 Query: 224 D---YFPLQQDLNK--VAPPDYSDP 283 + P D + + PP Y P Sbjct: 435 APLLHLPSPGDPPRLLLRPPFYCSP 459
>PG46_MYCTU (P0A690) Hypothetical PE-PGRS family protein PE_PGRS46| Length = 778 Score = 30.0 bits (66), Expect = 5.6 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -3 Query: 201 GMSPVRVLNANS-MHGSDHEFPNNGRANPDGSAASPGTAACGGKAGSGVGAYWG 43 G++P + N N+ +G+D N+G N G PG A G+AG GVG G Sbjct: 379 GVNPGSIANPNTGANGTD----NSGNGNQTGGNGGPGPAGGVGEAG-GVGGQGG 427
>PG46_MYCBO (P0A691) Hypothetical PE-PGRS family protein PE_PGRS46| Length = 778 Score = 30.0 bits (66), Expect = 5.6 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -3 Query: 201 GMSPVRVLNANS-MHGSDHEFPNNGRANPDGSAASPGTAACGGKAGSGVGAYWG 43 G++P + N N+ +G+D N+G N G PG A G+AG GVG G Sbjct: 379 GVNPGSIANPNTGANGTD----NSGNGNQTGGNGGPGPAGGVGEAG-GVGGQGG 427
>HES1_BOVIN (Q3ZBG4) Transcription factor HES-1 (Hairy and enhancer of split 1)| Length = 280 Score = 30.0 bits (66), Expect = 5.6 Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 2/75 (2%) Frame = +2 Query: 11 APFATSSANVEPQYAPTPEPALPPQAAVPGDAADPSGFALPLFGNSWSDPCI--EFAFKT 184 APFA P P P A PP P P+G A +FG P +FAF Sbjct: 179 APFAPP-----PPLVPIPGGAAPPPGGAPCKLGSPAGEAAKVFGGFQVVPAPDGQFAFLI 233 Query: 185 LTGDIPVLNPTVADY 229 G P + Y Sbjct: 234 PNGAFAHSGPVIPVY 248
>MYCN_RAT (Q63379) N-myc proto-oncogene protein| Length = 462 Score = 30.0 bits (66), Expect = 5.6 Identities = 34/142 (23%), Positives = 54/142 (38%), Gaps = 9/142 (6%) Frame = +2 Query: 62 PEPALPPQAAVPGDAADPSGFALPLF---GNSWSDPCIEFAFKT-----LTGDIPVLNPT 217 P P L P A P + +PS +A + + W +P E AF LT + +L Sbjct: 57 PTPPLSPSRAFPEHSPEPSNWATEMLLPEADLWGNPAEEDAFGLGGLGGLTPNPVILQDC 116 Query: 218 VADYFPLQQDLNKVAPPDYSDPSVDDTRNHTHVNQSSHHSAPRPSNEFYNGGWFPPQ*RP 397 + F ++ L + +V++ H H + S P P + G Sbjct: 117 MWSGFSAREKLER---------AVNEKLQHGHGPPGASSSCPAPGVGASSSG-------- 159 Query: 398 GR-LNGRTACARKKADVPLVLA 460 GR L G + R A +P L+ Sbjct: 160 GRALGGSASAGRTGATLPTDLS 181
>ODP2_RHIME (Q9R9N3) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 447 Score = 30.0 bits (66), Expect = 5.6 Identities = 16/45 (35%), Positives = 19/45 (42%) Frame = +2 Query: 11 APFATSSANVEPQYAPTPEPALPPQAAVPGDAADPSGFALPLFGN 145 AP +A P AP P A PQAA P A G +F + Sbjct: 100 APKPKETAETAPAAAPAPAAAPAPQAAAPASPAPADGEGKRIFSS 144
>PPB_LYSEN (Q05205) Alkaline phosphatase precursor (EC 3.1.3.1) (APASE)| Length = 539 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = -3 Query: 159 GSDHEFPNNGRANPDGSAASPG----TAACGGKAGSGV 58 G DH + G+ NPD +AAS G GG+A G+ Sbjct: 330 GHDHNYQRYGKMNPDKAAASDGIRQVLVGTGGRAFYGI 367
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 30.0 bits (66), Expect = 5.6 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +2 Query: 26 SSANVEPQYAPTPEPALPPQAAVPGDAA 109 S + +E AP P PA PPQA PG A+ Sbjct: 1169 SFSAIEVVPAPEPPPATPPQAKFPGPAS 1196
>MYOZ1_BOVIN (Q8SQ24) Myozenin-1 (Calsarcin-2)| Length = 297 Score = 29.6 bits (65), Expect = 7.3 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = -3 Query: 162 HGSDHEFPNNGRANPDGSAASPGTAACGGKAG-SGVG 55 +GSD + + G + GS + PG+ GG G SG G Sbjct: 125 YGSDQQHHHQGSGSGSGSGSGPGSGGAGGPGGHSGRG 161
>MLE1_MUGCA (P82159) Myosin light chain 1, skeletal muscle isoform (A1| catalytic) (Alkali) (LC-1) (LC1) Length = 186 Score = 29.6 bits (65), Expect = 7.3 Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 2/86 (2%) Frame = +2 Query: 53 APTPEPALPPQAAVPGDAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIPVLNPTVADYF 232 AP P PA P A A D S + + D F GD V +AD Sbjct: 12 APAPAPAPEPAPAPAAPAVDLSAVKVEFSADQIEDYREAFGLFDRVGDNKVAYNQIADIM 71 Query: 233 PL--QQDLNKVAPPDYSDPSVDDTRN 304 Q NK +PS DD N Sbjct: 72 RALGQNPTNKEVSKLLGNPSADDMTN 97
>KCNC3_RAT (Q01956) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 889 Score = 29.6 bits (65), Expect = 7.3 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 11/50 (22%) Frame = +2 Query: 47 QYAPTPEPA-------LPP---QAAVPGDAADPSGFALPLF-GNSWSDPC 163 Q APTP+P LPP Q A PG AA P+G L G ++PC Sbjct: 22 QPAPTPQPPESSPPPLLPPPQQQCAQPGTAASPAGAPLSCGPGGRRAEPC 71
>RX_MOUSE (O35602) Retinal homeobox protein Rx (Retina and anterior neural| fold homeobox protein) Length = 342 Score = 29.6 bits (65), Expect = 7.3 Identities = 17/51 (33%), Positives = 20/51 (39%) Frame = +2 Query: 62 PEPALPPQAAVPGDAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIPVLNP 214 P AL P PG + P G ALPL W P + T +P P Sbjct: 217 PSSALAPLGTGPGSGSGPPGSALPL--EPWLGPTLPGGGATALQSLPGFGP 265
>NDUA3_HUMAN (O95167) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit| 3 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase B9 subunit) (Complex I-B9) (CI-B9) Length = 84 Score = 29.6 bits (65), Expect = 7.3 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 143 NSWS-DPCIEFAFKTLTGDIPVLNPTVADYFPLQQDLNKVAPPDYSDPSVDD 295 N+W +P + +F + G + V+ P ++ YF +NK P +Y P DD Sbjct: 11 NAWDKEPVLVVSF--VVGGLAVILPPLSPYFKYSVMINKATPYNYPVPVRDD 60
>Y232_HELPY (O25018) UPF0323 lipoprotein HP0232 precursor| Length = 215 Score = 29.6 bits (65), Expect = 7.3 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -3 Query: 141 PNNGRANPDGSAASPGTAACGGKAGSGVGAYWGS 40 PNNG +N +GS G+A G AG+ +G+Y G+ Sbjct: 113 PNNGGSN-EGSGFGLGSAILGSAAGAILGSYIGN 145
>Y217_HELPJ (Q9ZMK2) UPF0323 lipoprotein jhp_0217 precursor| Length = 215 Score = 29.6 bits (65), Expect = 7.3 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -3 Query: 141 PNNGRANPDGSAASPGTAACGGKAGSGVGAYWGS 40 PNNG +N +GS G+A G AG+ +G+Y G+ Sbjct: 113 PNNGGSN-EGSGFGLGSAILGSAAGAILGSYIGN 145
>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1708 Score = 29.6 bits (65), Expect = 7.3 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Frame = +2 Query: 5 DTAPFATSSANVEPQYAPT----PEPALPPQAAVPGDAADPSGFALPLFG 142 +T P N P Y+ + P PA PP+ AADP FA L G Sbjct: 146 ETEPLYPIGGNGAPGYSSSMMREPRPASPPRETKHARAADPMSFASILSG 195
>CTTB2_HORSE (Q2QLA2) Cortactin-binding protein 2 (CortBP2)| Length = 1665 Score = 29.3 bits (64), Expect = 9.6 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 1/84 (1%) Frame = +2 Query: 5 DTAPFATSSANVEPQYAPTPEPALPPQAAVPGDAADPSGFALPLFGNSWSDPCIEFAFKT 184 + P S+A++ P P A PP PG A A P+ +S PC + Sbjct: 383 ENGPSTGSTADLTSSTPPLPNNAAPPTVQTPGVAPQSYSQASPM--HSLHSPCANASLH- 439 Query: 185 LTGDIPVLNPTV-ADYFPLQQDLN 253 P LNP + A F Q + N Sbjct: 440 -----PGLNPRIQAARFRFQGNAN 458
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 29.3 bits (64), Expect = 9.6 Identities = 18/38 (47%), Positives = 19/38 (50%) Frame = +2 Query: 8 TAPFATSSANVEPQYAPTPEPALPPQAAVPGDAADPSG 121 TAP A V P AP P PA PP G+AA SG Sbjct: 2317 TAPAVIKEAPVAP--APGPAPAPPPGQKPAGEAAAGSG 2352
>TFEB_HUMAN (P19484) Transcription factor EB| Length = 476 Score = 29.3 bits (64), Expect = 9.6 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +2 Query: 56 PTPEPALPPQAAVPGDAADPSGFALPLFGNSWS 154 P P PALPPQA +P PS F F +S S Sbjct: 369 PEPLPALPPQAPLPLPTQPPSPFHHLDFSHSLS 401
>RENT1_HUMAN (Q92900) Regulator of nonsense transcripts 1 (EC 3.6.1.-)| (ATP-dependent helicase RENT1) (Nonsense mRNA reducing factor 1) (NORF1) (Up-frameshift suppressor 1 homolog) (hUpf1) Length = 1129 Score = 29.3 bits (64), Expect = 9.6 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Frame = -3 Query: 159 GSDHEFPN----NGRANPDGSAASPGTAACGGKAGSGVGAYWGSTFAEEVAKG 13 GS+ EF + + P G PG GG G+G GA G A+ +G Sbjct: 30 GSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPGGAGAGAAAGQLDAQVGPEG 82
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 29.3 bits (64), Expect = 9.6 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +2 Query: 44 PQYAPTPEPALPPQ-AAVPGDAADPSGFALPLFGNSWSDPCIEFAFKTLTGDIPVLNPTV 220 P P P PA PPQ A+ P A P + P + ++ ++P+ +P + Sbjct: 2044 PPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAP--AQPSVPLTQLSMPMELPIFSPLM 2101 Query: 221 ADYFPLQ 241 PLQ Sbjct: 2102 MQTMPLQ 2108
>PG36_MYCTU (P0A688) Hypothetical PE-PGRS family protein PE_PGRS36| Length = 491 Score = 29.3 bits (64), Expect = 9.6 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -3 Query: 177 NANSMHGSDHEFPNNGRANPDGSAASPGTAACGGKAGSG 61 + N+ +G NG A G + +PG+ + GG G+G Sbjct: 359 STNAGNGGSARLIGNGGAGGSGGSGAPGSVSSGGVGGAG 397
>PG36_MYCBO (P0A689) Hypothetical PE-PGRS family protein PE_PGRS36| Length = 491 Score = 29.3 bits (64), Expect = 9.6 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -3 Query: 177 NANSMHGSDHEFPNNGRANPDGSAASPGTAACGGKAGSG 61 + N+ +G NG A G + +PG+ + GG G+G Sbjct: 359 STNAGNGGSARLIGNGGAGGSGGSGAPGSVSSGGVGGAG 397
>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related| protein E74B) Length = 883 Score = 29.3 bits (64), Expect = 9.6 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 26 SSANVEPQYAPTPEPALPPQAAVPGDAADPSGFAL 130 SSA P +P + PP AA P +A+ P+G L Sbjct: 53 SSATPTPVASPVTPTSPPPAAAAPAEASPPAGAEL 87
>ODP2_MYCPN (P75392) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 402 Score = 29.3 bits (64), Expect = 9.6 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = +2 Query: 8 TAPFATSSANVEPQYAPTPEPALPPQAAVPGDAADPSG 121 +AP T + V+P APTP PA P AA PSG Sbjct: 141 SAPQPTPAPVVQPTSAPTPTPA-------PASAAAPSG 171
>CU20_MANSE (Q8T635) Pupal cuticle protein 20 precursor (MsCP20) (MS-PCP20)| Length = 200 Score = 29.3 bits (64), Expect = 9.6 Identities = 16/33 (48%), Positives = 17/33 (51%) Frame = -3 Query: 138 NNGRANPDGSAASPGTAACGGKAGSGVGAYWGS 40 + G A G A G A GG GSG GAY GS Sbjct: 40 SGGNAGLGGGAGGSGAGA-GGFGGSGAGAYGGS 71
>MNB_DROME (P49657) Serine/threonine-protein kinase minibrain (EC 2.7.12.1)| Length = 908 Score = 29.3 bits (64), Expect = 9.6 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Frame = -3 Query: 207 RTGMSPVRVLNANSMHGSDHEFPNNGRANPDGSAAS--PGTAACGGKAGSGVGAYWGSTF 34 +T ++P L N + E N A +A + G++ GG +G GVG G Sbjct: 470 KTRVTPYYALQHNFFKRTADEATNTSGAGATANAGAGGSGSSGAGGSSGGGVG---GGLG 526 Query: 33 AEEVAKGAVS 4 A + GAVS Sbjct: 527 ASNSSSGAVS 536
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 29.3 bits (64), Expect = 9.6 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -3 Query: 177 NANSMHGSDHEFPNNGRANPD-GSAASPGTAACGGKAGSGVGAY 49 +A+++H H P+ G +P A + G ++CG G G+ +Y Sbjct: 28 SASNLHALAHPVPSPGSCSPKFPGAPNGGGSSCGPAGGGGLASY 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,787,789 Number of Sequences: 219361 Number of extensions: 2147298 Number of successful extensions: 10265 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 8089 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10027 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
