ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63p15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PYRC_VIBVY (Q7MFB3) Dihydroorotase (EC 3.5.2.3) (DHOase) 32 1.6
2PYRC_VIBVU (Q8D3T9) Dihydroorotase (EC 3.5.2.3) (DHOase) 32 1.6
3KI3L3_HUMAN (Q8N743) Killer cell immunoglobulin-like receptor 3D... 30 4.5
4FL3H_ARATH (Q9S818) Naringenin,2-oxoglutarate 3-dioxygenase (EC ... 29 7.8
5INH_BPT4 (P18058) Protein inh (Inhibitor protein) 29 7.8
6COAT_CYMV (P16486) Coat protein (Capsid protein) (CP) 29 7.8

>PYRC_VIBVY (Q7MFB3) Dihydroorotase (EC 3.5.2.3) (DHOase)|
          Length = 342

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 400 SRCGPDDQGVKRENTCRWVVEDCWNYALRNNIAGDVLSPIESGE 269
           S  GPD  G+ R      +V+D W         GD++ PI +GE
Sbjct: 292 SHNGPDFYGLPRNQDTITLVKDAWPVPASMPFGGDIVVPIRAGE 335



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>PYRC_VIBVU (Q8D3T9) Dihydroorotase (EC 3.5.2.3) (DHOase)|
          Length = 342

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 400 SRCGPDDQGVKRENTCRWVVEDCWNYALRNNIAGDVLSPIESGE 269
           S  GPD  G+ R      +V+D W         GD++ PI +GE
Sbjct: 292 SHNGPDFYGLPRNQDTITLVKDAWPVPASMPFGGDIVVPIRAGE 335



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>KI3L3_HUMAN (Q8N743) Killer cell immunoglobulin-like receptor 3DL3 precursor|
           (Killer cell inhibitory receptor 1) (CD158z antigen)
          Length = 410

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
 Frame = -1

Query: 451 WY*IIGPEGQHSKLPLRSRCGPDDQGVKRENTCRWVVEDCWNYALRNNIAGDVLSPIESG 272
           W   +  EGQH  L  RSR G ++  + +E+     V + +N   RN+     ++P  +G
Sbjct: 34  WPGTVVSEGQHVTLQCRSRLGFNEFSLSKED--GMPVPELYNRIFRNSFLMGPVTPAHAG 91

Query: 271 -----EESPFSPRSAMCPHLSVVCSRTTEYSIP 188
                   P SP     P   VV   T  +  P
Sbjct: 92  TYRCCSSHPHSPTGWSAPSNPVVIMVTGVHRKP 124



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>FL3H_ARATH (Q9S818) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)|
           (Flavanone 3-hydroxylase) (Naringenin 3-dioxygenase)
           (FH3) (TRANSPARENT TESTA 6 protein)
          Length = 358

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 415 KLPLRSRCGPDDQGVKRENTCRWVVEDCWNYAL 317
           ++P+ S  G DD   KR   CR +VE C N+ +
Sbjct: 37  EIPVISLAGIDDVDGKRGEICRQIVEACENWGI 69



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>INH_BPT4 (P18058) Protein inh (Inhibitor protein)|
          Length = 226

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 321 PSVITLQAMFSPPLSL-GKNLHSHLVQLCVLIFLSFAAERRSTPFQDEHA 175
           PSV TL   FSP L L GKNL    V   +  +++   + +S P   EHA
Sbjct: 144 PSVFTLPENFSPNLQLIGKNLGFCTVPWWIYQWIAETPDWKSHPTSFEHA 193



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>COAT_CYMV (P16486) Coat protein (Capsid protein) (CP)|
          Length = 212

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 415 KLPLRSRCGPDDQGVKRENTCRWVVEDCWNYALRNN 308
           K+PL    G   Q       CR+  +  WNYALR N
Sbjct: 82  KIPLYQLAGVVRQHSTLRRFCRYFAKVIWNYALRKN 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,359,510
Number of Sequences: 219361
Number of extensions: 1750718
Number of successful extensions: 3726
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3726
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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