ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63p11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 54 6e-04
2gb|CP000316.1| Polaromonas sp. JS666, complete genome 48 0.034
3gb|AF234173.1| Enterobacteria phage P1 mod1902::IS5 c1.100 rev d... 44 0.53
4gb|AF234172.1| Enterobacteria phage P1 mod749::IS5 c1.100 mutant... 44 0.53
5gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.53
6ref|XM_475071.1| Oryza sativa (japonica cultivar-group), predic... 42 2.1
7gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
9gb|AC105313.3| Homo sapiens BAC clone RP11-30P21 from 4, complet... 42 2.1
10gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
11gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, comp... 40 8.3
12ref|XM_632284.1| Dictyostelium discoideum hypothetical protein (... 40 8.3
13gb|AF039904.1| Homo sapiens cosmid D66B10, chromosome 21 5' of I... 40 8.3
14gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 8.3
15gb|AC136915.14| Mus musculus chromosome 16, clone RP23-65O24, co... 40 8.3
16gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosom... 40 8.3
17gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CI... 40 8.3
18gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, comp... 40 8.3
19gb|AC130312.3| Homo sapiens chromosome 11, clone RP11-97G1, comp... 40 8.3
20emb|AL353705.23| Human DNA sequence from clone RP11-336N8 on chr... 40 8.3
21emb|AL031387.4|HS596C15 Human DNA sequence from clone RP4-596C15... 40 8.3
22gb|AC133916.2| Homo sapiens chromosome 16 clone RP11-135K11, com... 40 8.3
23gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, com... 40 8.3
24gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Can... 40 8.3
25gb|AC144532.4| Homo sapiens 12 BAC RP11-613J12 (Roswell Park Can... 40 8.3
26emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 ... 40 8.3
27emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in ... 40 8.3
28gb|AC107971.8| Homo sapiens chromosome 11, clone CTD-2307F18, co... 40 8.3
29gb|AC110283.4| Homo sapiens chromosome 11, clone RP11-350A7, com... 40 8.3
30gb|AF080500.1| Poecilia velifera mitochondrial control region, D... 40 8.3
31gb|AC087377.7| Homo sapiens chromosome 11, clone RP11-292L2, com... 40 8.3
32gb|AC091644.7| Homo sapiens chromosome 11, clone RP11-808H14, co... 40 8.3
33gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.3
34gb|AC154285.2| Mus musculus BAC clone RP23-452P8 from chromosome... 40 8.3
35gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, comp... 40 8.3
36dbj|AP000044.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 8.3
37gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, comp... 40 8.3
38gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, com... 40 8.3
39emb|AL954217.1| Pan troglodytes chromosome 22 clone PTB-073G05 m... 40 8.3
40emb|AL954216.1| Pan troglodytes chromosome 22 clone PTB-196A08 m... 40 8.3
41dbj|AP001716.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.3
42gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, comp... 40 8.3
43gb|AC140195.3| Mus musculus BAC clone RP24-64A19 from 6, complet... 40 8.3
44emb|AL935309.8| Mouse DNA sequence from clone RP24-113M11 on chr... 40 8.3
45gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, com... 40 8.3
46gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, com... 40 8.3
47gb|AC125789.2| Homo sapiens chromosome 5 clone CTD-2262G7, compl... 40 8.3
48dbj|AP000295.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.3
49dbj|AP000188.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.3
50dbj|AP000112.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 8.3 
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 119    acgcggaggctctggctgctgccgtcgcgctctatgcctcgcccctcctcc 169
              |||||||||||||||| || |||| || |||||||||| ||||||| ||||
Sbjct: 144085 acgcggaggctctggccgcggccgccgtgctctatgccccgcccctgctcc 144035
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 61     ccgcccatgccgaccttctcgagc 84
              ||||||||||||||||||||||||
Sbjct: 707359 ccgcccatgccgaccttctcgagc 707336
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>gb|AF234173.1| Enterobacteria phage P1 mod1902::IS5 c1.100 rev dmt(del)MB mutant,
             complete genome
          Length = 94481

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 201   tccgattcggtgtccgggaggatatc 226
             ||||||||||||||||||||| ||||
Sbjct: 76443 tccgattcggtgtccgggaggttatc 76468
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>gb|AF234172.1| Enterobacteria phage P1 mod749::IS5 c1.100 mutant, complete genome
          Length = 94800

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 201   tccgattcggtgtccgggaggatatc 226
             ||||||||||||||||||||| ||||
Sbjct: 76762 tccgattcggtgtccgggaggttatc 76787
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 197     catctccgattcggtgtccggg 218
               ||||||||||||||||||||||
Sbjct: 1010154 catctccgattcggtgtccggg 1010175
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>ref|XM_475071.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 471

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 438 tcaggaagtgttcaagacaataacaagcagtta 470
           |||||||  ||||| ||||||||||||||||||
Sbjct: 150 tcaggaaaggttcaggacaataacaagcagtta 182
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>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035J08, complete sequence
          Length = 117555

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 438   tcaggaagtgttcaagacaataacaagcagtta 470
             |||||||  ||||| ||||||||||||||||||
Sbjct: 33330 tcaggaaaggttcaggacaataacaagcagtta 33298
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 438    tcaggaagtgttcaagacaataacaagcagtta 470
              |||||||  ||||| ||||||||||||||||||
Sbjct: 257810 tcaggaaaggttcaggacaataacaagcagtta 257778
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>gb|AC105313.3| Homo sapiens BAC clone RP11-30P21 from 4, complete sequence
          Length = 145240

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 584  tgtcattagaaatcaagaaaa 604
            |||||||||||||||||||||
Sbjct: 6028 tgtcattagaaatcaagaaaa 6048
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
              complete sequence
          Length = 160603

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 438    tcaggaagtgttcaagacaataacaagcagtta 470
              |||||||  ||||| ||||||||||||||||||
Sbjct: 139994 tcaggaaaggttcaggacaataacaagcagtta 139962
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>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence
          Length = 203580

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   ttagaaatcaagaaaaaagt 608
             ||||||||||||||||||||
Sbjct: 36486 ttagaaatcaagaaaaaagt 36467
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>ref|XM_632284.1| Dictyostelium discoideum hypothetical protein (DDB0187320), partial
            mRNA
          Length = 5619

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 510  tagaatcattaggaatgaattttc 533
            |||||||||||| |||||||||||
Sbjct: 3225 tagaatcattagaaatgaattttc 3248
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>gb|AF039904.1| Homo sapiens cosmid D66B10, chromosome 21 5' of IFNAR1
          Length = 25076

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 577   ataaatatgtcattagaaatcaag 600
             |||||||| |||||||||||||||
Sbjct: 13872 ataaatatttcattagaaatcaag 13895
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ccatgccgaccttctcgagc 84
              ||||||||||||||||||||
Sbjct: 175357 ccatgccgaccttctcgagc 175376
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>gb|AC136915.14| Mus musculus chromosome 16, clone RP23-65O24, complete sequence
          Length = 140233

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 573    tttcataaatatgtcattag 592
              ||||||||||||||||||||
Sbjct: 127331 tttcataaatatgtcattag 127312
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>gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosome 3, complete sequence
          Length = 175131

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 589    ttagaaatcaagaaaaaagt 608
              ||||||||||||||||||||
Sbjct: 147952 ttagaaatcaagaaaaaagt 147933
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>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914  ~complete genomic
              sequence, complete sequence
          Length = 161580

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 493    tggaatcactgcatttgtagaatc 516
              |||||||||||| |||||||||||
Sbjct: 118496 tggaatcactgcttttgtagaatc 118473
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>gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, complete sequence
          Length = 166928

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 493  tggaatcactgcatttgtagaatc 516
            |||||||||||| |||||||||||
Sbjct: 1130 tggaatcactgcttttgtagaatc 1107
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>gb|AC130312.3| Homo sapiens chromosome 11, clone RP11-97G1, complete sequence
          Length = 161367

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 493    tggaatcactgcatttgtagaatc 516
              ||||||||||| ||||||||||||
Sbjct: 154479 tggaatcactgtatttgtagaatc 154502
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>emb|AL353705.23| Human DNA sequence from clone RP11-336N8 on chromosome 9q21.11-21.31
              Contains a synaptogyrin 2 (SYNGR2) pseudogene, an
              argininosuccinate synthetase (ASS) pseudogene, a ribosomal
              protein L21 (RPL21) pseudogene, a CDC28 protein kinase
              regulatory subunit 2 (CKS2) pseudogene, the C9orf81 gene
              for chromosome 9 open reading frame 81 and a CpG island,
              complete sequence
          Length = 166372

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 559    aatgtggagagaactttcataaatatgt 586
              |||| |||| ||||||||||||||||||
Sbjct: 136101 aatgaggagggaactttcataaatatgt 136128
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>emb|AL031387.4|HS596C15 Human DNA sequence from clone RP4-596C15 on chromosome Xq23 Contains the
              NXT2 gene for nuclear transport factor 2-like export factor
              2 and the GUCY2F gene for guanylate cyclase 2F, retinal,
              complete sequence
          Length = 178863

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 590    tagaaatcaagaaaaaagta 609
              ||||||||||||||||||||
Sbjct: 131280 tagaaatcaagaaaaaagta 131261
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>gb|AC133916.2| Homo sapiens chromosome 16 clone RP11-135K11, complete sequence
          Length = 169142

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 493    tggaatcactgcatttgtagaatc 516
              |||||||||||| |||||||||||
Sbjct: 167221 tggaatcactgcttttgtagaatc 167198
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>gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, complete sequence
          Length = 161261

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 82299 tggaatcactgcttttgtagaatc 82276
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>gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 493    tggaatcactgcatttgtagaatc 516
              ||||||||||| ||||||||||||
Sbjct: 108738 tggaatcactgtatttgtagaatc 108715
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>gb|AC144532.4| Homo sapiens 12 BAC RP11-613J12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 131101

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 81190 tggaatcactgcttttgtagaatc 81167
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>emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 in linkage group 25,
              complete sequence
          Length = 225139

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    gccctgataagggggagtgc 356
              ||||||||||||||||||||
Sbjct: 168662 gccctgataagggggagtgc 168643
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>emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in linkage group 25,
             complete sequence
          Length = 176023

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   gccctgataagggggagtgc 356
             ||||||||||||||||||||
Sbjct: 62465 gccctgataagggggagtgc 62484
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>gb|AC107971.8| Homo sapiens chromosome 11, clone CTD-2307F18, complete sequence
          Length = 119883

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             ||||||||||| ||||||||||||
Sbjct: 64783 tggaatcactgtatttgtagaatc 64760
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>gb|AC110283.4| Homo sapiens chromosome 11, clone RP11-350A7, complete sequence
          Length = 162170

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 11745 tggaatcactgcttttgtagaatc 11722
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>gb|AF080500.1| Poecilia velifera mitochondrial control region, D-loop partial
           sequence
          Length = 438

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 587 cattagaaatcaagaaaaaa 606
           ||||||||||||||||||||
Sbjct: 235 cattagaaatcaagaaaaaa 254
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>gb|AC087377.7| Homo sapiens chromosome 11, clone RP11-292L2, complete sequence
          Length = 190650

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 38370 tggaatcactgcttttgtagaatc 38393
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>gb|AC091644.7| Homo sapiens chromosome 11, clone RP11-808H14, complete sequence
          Length = 183187

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 33325 tggaatcactgcttttgtagaatc 33348
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      cgcccatgccgaccttctcg 81
               ||||||||||||||||||||
Sbjct: 2528023 cgcccatgccgaccttctcg 2528004
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>gb|AC154285.2| Mus musculus BAC clone RP23-452P8 from chromosome 16, complete sequence
          Length = 183796

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 573   tttcataaatatgtcattag 592
             ||||||||||||||||||||
Sbjct: 27641 tttcataaatatgtcattag 27622
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>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence
          Length = 196550

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 87271 tggaatcactgcttttgtagaatc 87294
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>dbj|AP000044.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 15/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 577   ataaatatgtcattagaaatcaag 600
             |||||||| |||||||||||||||
Sbjct: 33942 ataaatatttcattagaaatcaag 33965
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>gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, complete sequence
          Length = 167832

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 58865 tggaatcactgcttttgtagaatc 58842
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>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence
          Length = 221622

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 493    tggaatcactgcatttgtagaatc 516
              |||||||||||| |||||||||||
Sbjct: 157215 tggaatcactgcttttgtagaatc 157238
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>emb|AL954217.1| Pan troglodytes chromosome 22 clone PTB-073G05 map 22q22.11, complete
             sequence
          Length = 160344

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 577   ataaatatgtcattagaaatcaag 600
             |||||||| |||||||||||||||
Sbjct: 18097 ataaatatttcattagaaatcaag 18120
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>emb|AL954216.1| Pan troglodytes chromosome 22 clone PTB-196A08 map 22q22.11, complete
             sequence
          Length = 166547

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 577   ataaatatgtcattagaaatcaag 600
             |||||||| |||||||||||||||
Sbjct: 57597 ataaatatttcattagaaatcaag 57620
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>dbj|AP001716.1| Homo sapiens genomic DNA, chromosome 21q, section 60/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 577    ataaatatgtcattagaaatcaag 600
              |||||||| |||||||||||||||
Sbjct: 260092 ataaatatttcattagaaatcaag 260115
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>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence
          Length = 182046

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 58865 tggaatcactgcttttgtagaatc 58842
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>gb|AC140195.3| Mus musculus BAC clone RP24-64A19 from 6, complete sequence
          Length = 156314

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   aatatgtcattagaaatcaa 599
             ||||||||||||||||||||
Sbjct: 97857 aatatgtcattagaaatcaa 97838
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>emb|AL935309.8| Mouse DNA sequence from clone RP24-113M11 on chromosome 2, complete
             sequence
          Length = 45336

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   tcctctggccttattgccgagaag 265
             |||||||| |||||||||||||||
Sbjct: 29608 tcctctgggcttattgccgagaag 29631
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>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   tggaatcactgcatttgtagaatc 516
             |||||||||||| |||||||||||
Sbjct: 43409 tggaatcactgcttttgtagaatc 43432
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>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence
          Length = 161397

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 493    tggaatcactgcatttgtagaatc 516
              |||||||||||| |||||||||||
Sbjct: 122829 tggaatcactgcttttgtagaatc 122806
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>gb|AC125789.2| Homo sapiens chromosome 5 clone CTD-2262G7, complete sequence
          Length = 135052

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 493    tggaatcactgcatttgtagaatc 516
              |||||||||||| |||||||||||
Sbjct: 133089 tggaatcactgcttttgtagaatc 133066
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>dbj|AP000295.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:S318, complete sequence
          Length = 56131

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 577   ataaatatgtcattagaaatcaag 600
             |||||||| |||||||||||||||
Sbjct: 55280 ataaatatttcattagaaatcaag 55303
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>dbj|AP000188.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 15/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 577   ataaatatgtcattagaaatcaag 600
             |||||||| |||||||||||||||
Sbjct: 39918 ataaatatttcattagaaatcaag 39941
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>dbj|AP000112.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 15/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 577   ataaatatgtcattagaaatcaag 600
             |||||||| |||||||||||||||
Sbjct: 39918 ataaatatttcattagaaatcaag 39941


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,260,794
Number of Sequences: 3902068
Number of extensions: 4260794
Number of successful extensions: 84743
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84340
Number of HSP's gapped (non-prelim): 403
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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