ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63p10 |
|---|---|
| Clone Library Name | barley_pub |
>CPLX2_RAT (P84087) Complexin-2 (Synaphin-1)| Length = 134 Score = 40.8 bits (94), Expect = 0.003 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKM-------KADGALDKARKHKKRQ-LEDTYNLVVKKRKEYEEKM 384 +KDP+A K + E+ E + KA A +A + K RQ + D Y L K+ KE EEK Sbjct: 25 EKDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKA 84 Query: 385 KVKGEQPVMFSHLGPPKRRPA--ADEDDRAKNPMPEDSVYYHP 507 + EQP S P K PA DE++ + + + + Y P Sbjct: 85 AL--EQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTVLKYLP 125
>CPLX2_MOUSE (P84086) Complexin-2 (Synaphin-1) (921-L)| Length = 134 Score = 40.8 bits (94), Expect = 0.003 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKM-------KADGALDKARKHKKRQ-LEDTYNLVVKKRKEYEEKM 384 +KDP+A K + E+ E + KA A +A + K RQ + D Y L K+ KE EEK Sbjct: 25 EKDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKA 84 Query: 385 KVKGEQPVMFSHLGPPKRRPA--ADEDDRAKNPMPEDSVYYHP 507 + EQP S P K PA DE++ + + + + Y P Sbjct: 85 AL--EQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTVLKYLP 125
>CPLX2_HUMAN (Q6PUV4) Complexin-2 (Synaphin-1)| Length = 134 Score = 40.8 bits (94), Expect = 0.003 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKM-------KADGALDKARKHKKRQ-LEDTYNLVVKKRKEYEEKM 384 +KDP+A K + E+ E + KA A +A + K RQ + D Y L K+ KE EEK Sbjct: 25 EKDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKA 84 Query: 385 KVKGEQPVMFSHLGPPKRRPA--ADEDDRAKNPMPEDSVYYHP 507 + EQP S P K PA DE++ + + + + Y P Sbjct: 85 AL--EQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTVLKYLP 125
>CPLX2_BOVIN (P84088) Complexin-2 (Synaphin-1)| Length = 134 Score = 40.8 bits (94), Expect = 0.003 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKM-------KADGALDKARKHKKRQ-LEDTYNLVVKKRKEYEEKM 384 +KDP+A K + E+ E + KA A +A + K RQ + D Y L K+ KE EEK Sbjct: 25 EKDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKA 84 Query: 385 KVKGEQPVMFSHLGPPKRRPA--ADEDDRAKNPMPEDSVYYHP 507 + EQP S P K PA DE++ + + + + Y P Sbjct: 85 AL--EQPCEGSLTRPKKAIPAGCGDEEEEEEESILDTVLKYLP 125
>CPLX2_NARJA (O42105) Complexin-2 (NJ-synaphin-1A)| Length = 134 Score = 40.0 bits (92), Expect = 0.005 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 10/103 (9%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKMKADG--------ALDKARKHKKRQLEDTYNLVVKKRKEYEEKM 384 +KDP+A K + E+ E ++ ++ R+ ++Q+ D Y L K+ KE EEK Sbjct: 25 EKDPDAQKKEEERQEALRQQEDERKQKHIRMETEREKVRQQIRDKYGLKKKEEKEAEEKA 84 Query: 385 KVKGEQPVMFSHLGPPKRRPA--ADEDDRAKNPMPEDSVYYHP 507 + E P+ S P K PA DED+ + + + + Y P Sbjct: 85 AM--EAPIEGSLTRPKKAIPAGCGDEDEEDEESILDTVLKYLP 125
>YKD1_CAEEL (Q03560) Hypothetical protein B0464.2 in chromosome III| Length = 1150 Score = 35.8 bits (81), Expect = 0.088 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPV 408 KKD A K +K E+ + G R KKR+ ++ + ++++ ++ K+K + Sbjct: 978 KKDKAAKKASRKKRERRDSGGPDSNRRDEKKRKRKEERDRKLQEKLSAKQSAKIKSRAFL 1037 Query: 409 MFSHLG-PPKRRPAADEDDRAKNPMPEDSVYYHPT 510 S K +PAAD D +P P + PT Sbjct: 1038 SSSESSDDDKPKPAADSSDDEVDPRPPVDEFDSPT 1072
>MUTS2_THETN (Q8R9D0) MutS2 protein| Length = 790 Score = 35.0 bits (79), Expect = 0.15 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 7/63 (11%) Frame = +1 Query: 226 LKKDPNAIKDQIEKLEKMKADGALDKARKHKK-------RQLEDTYNLVVKKRKEYEEKM 384 LKK+ +K+++EK EK K + DK K K ++ + T V+K+ KE EEK Sbjct: 542 LKKEVEVLKEELEK-EKRKLESQKDKILKEAKEKAREIIKEAKQTAEEVIKRIKEAEEKE 600 Query: 385 KVK 393 K K Sbjct: 601 KNK 603
>CALD1_CHICK (P12957) Caldesmon (CDM)| Length = 771 Score = 33.1 bits (74), Expect = 0.57 Identities = 19/74 (25%), Positives = 38/74 (51%) Frame = +1 Query: 250 KDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPVMFSHLGP 429 +++ + E+ KA ++A+ ++R+ + ++RK EE+ K + E+ Sbjct: 303 RERAKAEEERKAAEERERAKAEEERKAAEERAKAEEERKAAEERAKAEEERKAAEERAKA 362 Query: 430 PKRRPAADEDDRAK 471 K R AA+E +RAK Sbjct: 363 EKERKAAEERERAK 376
>RAD50_SULTO (Q96YR5) DNA double-strand break repair rad50 ATPase| Length = 879 Score = 33.1 bits (74), Expect = 0.57 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Frame = +1 Query: 256 QIEKLEKMKADGALDKARKHK-----KRQLEDTYNLVVKKRKEYEEKMKVKGEQ 402 +++ LEK K + K +K K KR+LED K+RK+YE+ +K+ E+ Sbjct: 185 ELQSLEKYKNESENQKIQKEKELENIKRELEDLNIKEEKERKKYEDIVKLNEEE 238
>CTRO_MOUSE (P49025) Citron Rho-interacting kinase (EC 2.7.11.1) (CRIK)| (Rho-interacting, serine/threonine-protein kinase 21) Length = 2055 Score = 32.7 bits (73), Expect = 0.74 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 6/65 (9%) Frame = +1 Query: 226 LKKDPNAIKDQI----EKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKE--YEEKMK 387 +++ N +KD I E++++M AD L+ KH++ Q+ + V K+KE YEEK+K Sbjct: 709 MERRENRLKDDIQTKSEQIQQM-ADKILELEEKHREAQVSAQHLEVHLKQKEQHYEEKIK 767 Query: 388 VKGEQ 402 V Q Sbjct: 768 VLDNQ 772
>SMC1_YEAST (P32908) Structural maintenance of chromosome 1 (DA-box protein| SMC1) Length = 1225 Score = 32.3 bits (72), Expect = 0.97 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGE 399 KK+ +K++IEKL K + ++ R H + + TY + K +EY +++ K E Sbjct: 179 KKEYEELKEKIEKLSKSATESIKNRRRIHGELK---TYKEGINKNEEYRKQLDKKNE 232
>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)| (DRF3) Length = 1110 Score = 32.0 bits (71), Expect = 1.3 Identities = 22/82 (26%), Positives = 44/82 (53%) Frame = +1 Query: 244 AIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPVMFSHL 423 AIK+ I+K E + + + A++ +R+ L +++K+ +MK +G++ + +L Sbjct: 1009 AIKENIKKREAEEKEKRVRIAKELAERE-----RLERQQKKKRLLEMKTEGDETGVMDNL 1063 Query: 424 GPPKRRPAADEDDRAKNPMPED 489 + AA D R + PMP+D Sbjct: 1064 LEALQSGAAFRDRRKRTPMPKD 1085
>SBCC_CLOAB (Q97FK1) Nuclease sbcCD subunit C| Length = 1163 Score = 31.6 bits (70), Expect = 1.7 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 10/89 (11%) Frame = +1 Query: 250 KDQI--EKLEKMKAD-GALDKARKHKKR------QLEDTYNLVVKKRKEYEEKMKVKGEQ 402 KD+I EK+E +K G LD + K++ ++E+ YNL KK E E+K + ++ Sbjct: 799 KDKIINEKIELIKNKVGVLDNLYELKEKIEGTIKKIEEQYNLCDKKMNEIEDKYRKCSDE 858 Query: 403 PVMF-SHLGPPKRRPAADEDDRAKNPMPE 486 + + S+L K R D D K M E Sbjct: 859 IIKYHSNLSSLKDRKVNDIDKLNKILMEE 887
>CLPB_PARUW (Q6MD97) Chaperone clpB| Length = 868 Score = 31.6 bits (70), Expect = 1.7 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQP 405 KK ++K++ +KLEK++ + + + R E YNL+ + +KE EE +P Sbjct: 466 KKIIESLKEKKDKLEKLRFEEEAAERKADYNRVAELRYNLIPQLQKEIEEAQTQLNNKP 524
>RIMB2_CHICK (Q8QFX1) RIM-binding protein 2 (RIM-BP2)| Length = 1325 Score = 31.2 bits (69), Expect = 2.2 Identities = 20/72 (27%), Positives = 33/72 (45%) Frame = +1 Query: 295 LDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPVMFSHLGPPKRRPAADEDDRAKN 474 L KA+ K++ E L+ K +E EEK + + EQ + S R+ A D + N Sbjct: 32 LQKAQVEAKKEHEGAVQLLEAKVRELEEKCRTQSEQFNLLSRELEKFRQQAGKIDLLSSN 91 Query: 475 PMPEDSVYYHPT 510 P+ + P+ Sbjct: 92 PLTSSDISGSPS 103
>NUOM_BUCAI (P57263) NADH-quinone oxidoreductase chain M (EC 1.6.99.5) (NADH| dehydrogenase I, chain M) (NDH-1, chain M) Length = 505 Score = 30.8 bits (68), Expect = 2.8 Identities = 12/48 (25%), Positives = 27/48 (56%) Frame = -2 Query: 339 SILKLSFLMFPSLIQSTISLHLFQLLNLILYSIWVLFQNTNLPYLLSF 196 ++L+ + ++FP +S + +F + I Y W+ F TN+ L+++ Sbjct: 269 ALLRYNLVLFPDSTKSFSLIAVFWGIISIFYGAWIAFSQTNIKRLIAY 316
>PATL4_ARATH (Q94C59) Patellin-4| Length = 540 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPV 408 + + A+ D KLE+ D L K +K + +++ VVK E E+K + E+ V Sbjct: 66 ESEKKALSDLKSKLEEAIVDNTLLKTKKKESSPMKEKKEEVVKPEAEVEKKKEEAAEEKV 125
>IF2_AQUAE (O67825) Translation initiation factor IF-2| Length = 805 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/52 (36%), Positives = 30/52 (57%) Frame = +1 Query: 247 IKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQ 402 IK+ +EK EK K ++K RK +K ++ + VKK + EEK + K E+ Sbjct: 132 IKEILEKKEKEKEKKKVEKERKEEKVRVVE-----VKKEERKEEKKEEKKEE 178
>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150)| (DAP-150) (p150-glued) Length = 1280 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKM 384 KK +A KD E++EK++ +LE+T L+ KK KE+EE M Sbjct: 977 KKLDSAAKDADERIEKVQT-------------RLEETQTLLRKKEKEFEETM 1015
>LCP5_YEAST (P40079) U3 small nucleolar ribonucleoprotein protein LCP5| Length = 357 Score = 30.4 bits (67), Expect = 3.7 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Frame = +1 Query: 232 KDPNAIKDQIEKLE-KMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPV 408 KDP+A+ + ++ ++ + + K QL+ VK KEY++ K E+ Sbjct: 88 KDPSAMDARERSIQHRVVLERGVKPLEKKLAYQLDKLTRAYVKMEKEYKDAEKRALEKST 147 Query: 409 MFSHLGPPKRRPAADEDDRAKNPMPEDSVYYHP 507 + +H G DD + ED + Y P Sbjct: 148 LVNHSG---------NDDSEDDESSEDEIAYRP 171
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 30.4 bits (67), Expect = 3.7 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Frame = +1 Query: 250 KDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVK----GEQPVMFS 417 K + + +EK++ + A +AR+ K+R+ E ++ KE E + VK G PV Sbjct: 790 KKRADLVEKVRRE-AEQRAREEKEREREREREKEREREKERELERSVKLAQEGRAPVECP 848 Query: 418 HLGPPKRRP 444 LGP RP Sbjct: 849 SLGPVPHRP 857
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 30.4 bits (67), Expect = 3.7 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Frame = +1 Query: 250 KDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVK----GEQPVMFS 417 K + + +EK++ + A +AR+ K+R+ E ++ KE E + VK G PV Sbjct: 789 KKRADLVEKVRRE-AEQRAREEKEREREREREKEREREKERELERSVKLAQEGRAPVECP 847 Query: 418 HLGPPKRRP 444 LGP RP Sbjct: 848 SLGPVPHRP 856
>CPLX1_NARJA (O42106) Complexin-1 (NJ-synaphin-2)| Length = 133 Score = 30.4 bits (67), Expect = 3.7 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 11/93 (11%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLE---------DTYNLVVKKRKEYEEK 381 +KDP+A K + E+LE ++ ++A K+ K + E D Y +KK++E E + Sbjct: 25 EKDPDAEKKEEERLEALR-QAEEERAGKYAKMEAEREVMRQGIRDKYG--IKKKEEKEAE 81 Query: 382 MKVKGEQPVMFSHLGPPKRRPA--ADEDDRAKN 474 E S P K PA DED+ ++ Sbjct: 82 AMAAMEAQAEGSLTRPKKAIPAGCGDEDEEEES 114
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 30.4 bits (67), Expect = 3.7 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Frame = +1 Query: 250 KDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVK----GEQPVMFS 417 K + + +EK++ + A +AR+ K+R+ E ++ KE E + VK G PV Sbjct: 787 KKRADLVEKVRRE-AEQRAREEKEREREREREKEREREKERELERSVKLAQEGRAPVECP 845 Query: 418 HLGPPKRRP 444 LGP RP Sbjct: 846 SLGPVPHRP 854
>CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal Nek2-associated protein| 1) (C-NAP1) (Centrosome protein 250) (Centrosome-associated protein CEP250) Length = 2442 Score = 30.4 bits (67), Expect = 3.7 Identities = 18/61 (29%), Positives = 34/61 (55%) Frame = +1 Query: 241 NAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPVMFSH 420 + ++DQ++KLE+ D +K++ H + Q +L + + EEK K +G+Q + S Sbjct: 1260 DVLRDQVQKLEERLTDTEAEKSQVHTELQ-----DLQRQLSQNQEEKSKWEGKQNSLESE 1314 Query: 421 L 423 L Sbjct: 1315 L 1315
>MP62_LYTPI (P91753) Mitotic apparatus protein p62| Length = 411 Score = 30.4 bits (67), Expect = 3.7 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = +1 Query: 277 MKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPVMFSHLGPPKRRPAADE 456 +K A+ K K +L++ + ++ +E EE KG++ S GP K+ D+ Sbjct: 167 VKKIAAVKGRMKGKGDELDEDEDDDEEEEEEEEEIQTAKGKKRPAPSAKGPAKKLAKVDK 226 Query: 457 DDRAKNPMPEDSV 495 D +K +P SV Sbjct: 227 DGTSKRKVPNGSV 239
>Y013_MYCPN (P75100) Hypothetical UPF0134 protein MPN013 (D12_orf257)| Length = 257 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%) Frame = +1 Query: 235 DPNAIKDQIEKLEKMKADGALDK-----ARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGE 399 DP+ K ++ K +K LD+ A K +++ED +++ + +K E++KV+GE Sbjct: 113 DPSEGKQKVSKPDKYVTHRELDEKLKDFATKADFKRVEDKVDVLFELQKTQGEQIKVQGE 172 Query: 400 Q 402 Q Sbjct: 173 Q 173
>DC1I1_MOUSE (O88485) Cytoplasmic dynein 1 intermediate chain 1 (Dynein| intermediate chain 1, cytosolic) (DH IC-1) (Cytoplasmic dynein intermediate chain 1) Length = 628 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -3 Query: 146 SVGFMTFPPLVVFIFPPSSRATERPSCTGAGRFSQEKGG-GPSRRTL 9 S+G PPLV PSS++ PS G SQ+ G GP RTL Sbjct: 65 SIGISPEPPLVPTPMSPSSKSVSTPSDAG----SQDSGDLGPLTRTL 107
>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150)| (DAP-150) (p150-glued) (p135) Length = 1278 Score = 30.0 bits (66), Expect = 4.8 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +1 Query: 229 KKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKM 384 KK +A KD E++EK++ +LE+T L+ KK KE+EE M Sbjct: 978 KKLDSAAKDADERIEKVQT-------------RLEETQALLRKKEKEFEETM 1016
>ABRA_PLAFC (P22620) 101 kDa malaria antigen (p101) (Acidic basic repeat| antigen) Length = 743 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/88 (25%), Positives = 41/88 (46%) Frame = +1 Query: 226 LKKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQP 405 ++K AI QIE ++ A +K + K+++ E K+ KE EEK K K E+ Sbjct: 651 MEKQVEAITKQIEA--EVDALAPKNKEEEEKEKEKEKEKEEKEKEEKEKEEKEKEKEEKE 708 Query: 406 VMFSHLGPPKRRPAADEDDRAKNPMPED 489 K+ ++++ + +PE+ Sbjct: 709 KEKEEKEEEKKEKEEEQEEEEEEIVPEN 736
>IF2_IDILO (Q5QTY8) Translation initiation factor IF-2| Length = 896 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +1 Query: 250 KDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQ 402 K EKL++ + + A KA K + Q E+ L + K +EE+ + + +Q Sbjct: 191 KADAEKLKRQQEEEARKKAEKEAEAQAEEARKLAEENAKRWEEEEQKRKQQ 241
>CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2 (EC 3.6.1.-)| (ATP-dependent helicase CHD2) (CHD-2) Length = 1739 Score = 29.6 bits (65), Expect = 6.3 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 259 IEKLEKMKADGAL-DKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPVMFSHLGPPK 435 +E+LE + D L DK+ KR E +N V +EYEE++K + GP K Sbjct: 1150 LERLECLARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASE-----GKGPGK 1204 Query: 436 RR 441 RR Sbjct: 1205 RR 1206
>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC 6.3.2.-)| Length = 4065 Score = 29.6 bits (65), Expect = 6.3 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 7/65 (10%) Frame = +1 Query: 229 KKDPNAIK-DQIEKLEKMKADGALDKARK------HKKRQLEDTYNLVVKKRKEYEEKMK 387 K P AI+ ++ EK K +AD ++ RK KKR+ ++ +++KE EE+ + Sbjct: 2835 KLTPAAIQAEKEEKARKAEADRKAEEERKKRQEEERKKREAKEAEEKAAREKKEAEERER 2894 Query: 388 VKGEQ 402 ++ E+ Sbjct: 2895 LERER 2899
>MS116_YEAST (P15424) ATP-dependent RNA helicase MSS116, mitochondrial precursor| (EC 3.6.1.-) Length = 664 Score = 29.6 bits (65), Expect = 6.3 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +1 Query: 322 RQLEDTYNLVVKKRKEYEEKMKVKGE 399 R+LED N+V+ K+++YE ++K E Sbjct: 489 RELEDAKNIVIAKQEKYEPSEEIKSE 514
>YL253_YEAST (Q06567) ABC1 family protein YLR253W| Length = 569 Score = 29.6 bits (65), Expect = 6.3 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 3/55 (5%) Frame = -2 Query: 555 VHRRFARW---WCPRWIQGWVIVNRILRHRVFSSIVFVCCRPSLWWSKMAEHNWL 400 ++ +ARW W + W++ R + F V LWW K WL Sbjct: 520 INSEYARWSIKWMWENLTNWIVYERRINQLYFYDFV-------LWWKKFIPKTWL 567
>RFCL_PYRAB (Q9V2G3) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) (PabRFC large subunit) Length = 478 Score = 29.6 bits (65), Expect = 6.3 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = +1 Query: 226 LKKDPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQP 405 LKK+ I+ + ++ EK++ + + +KR+ +T +K K+ E+K + KG+Q Sbjct: 414 LKKEEEKIRKERKEEEKVEVREEKPEEKVEEKREERETKK---EKEKKEEKKAEKKGKQV 470 Query: 406 VMFSHL 423 +F + Sbjct: 471 TLFDFI 476
>CNKR2_HUMAN (Q8WXI2) Connector enhancer of kinase suppressor of ras 2| (Connector enhancer of KSR2) (CNK2) Length = 1034 Score = 29.3 bits (64), Expect = 8.2 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1 Query: 406 LVAHPLLSSFLHIPSFSSQQDYKYPQAVFSYVS*PYPEHHQPSSFPTSQSDPL*HLGPF 230 L+ PL SS LH +D +VFS + PEH + S+ PT + H GP+ Sbjct: 771 LIETPLTSSGLHYLQTLPLED-----SVFSDSAAISPEHRRQSTLPTQKCHLQDHYGPY 824
>Y2300_LACPL (Q88UZ5) UPF0144 protein lp_2300| Length = 519 Score = 29.3 bits (64), Expect = 8.2 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = +1 Query: 247 IKDQIEK--LEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPV 408 I+ +I K LEK+ DG + AR + +V K RKE +EK++ GEQ V Sbjct: 260 IRREIAKIALEKLIQDGRIHPARIEE---------MVEKARKEMDEKIRETGEQAV 306
>RPOB_HAEIN (P43738) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1343 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Frame = +1 Query: 256 QIEKLEKMK--ADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGEQPVMFSHLGP 429 Q++KL++ K D+ ++++ QL + Y + RKE+E K++VK ++ + L P Sbjct: 989 QLDKLDRTKWLEQTIADEEKQNQLEQLAEQYE---ELRKEFEHKLEVKRKKIIKGDDLAP 1045
>PNUT_DROME (P40797) Protein peanut| Length = 539 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 2/44 (4%) Frame = +1 Query: 262 EKLEKMKADGALDKARKHKKRQ--LEDTYNLVVKKRKEYEEKMK 387 EK++K++ D L+ AR+H++R+ LE + +KR+E+E + K Sbjct: 458 EKMQKLR-DSELELARRHEERKKALELQIRELEEKRREFEREKK 500
>CD2L1_MOUSE (P24788) PITSLRE serine/threonine-protein kinase CDC2L1 (EC| 2.7.11.22) (Galactosyltransferase-associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 1) Length = 784 Score = 29.3 bits (64), Expect = 8.2 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%) Frame = +1 Query: 235 DPNAIKDQIEKLEKMKADGALDKARKHKKRQLEDT-----YNLVVKKRKEYEEKMKVKGE 399 D AIK + K KA D+ RK K+R + + V +K +E+E + + + E Sbjct: 81 DSLAIKPPQQMSRKEKAHHRKDEKRKEKRRHRSHSAEGGKHARVKEKEREHERRKRHREE 140 Query: 400 QPVMFSHLGPPKRRPAADEDDR 465 Q KRR A E R Sbjct: 141 QDKARREWERQKRREMAREHSR 162
>DNAK_LACSN (Q8KML6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 614 Score = 29.3 bits (64), Expect = 8.2 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +1 Query: 247 IKDQIEKLEKMKADGALDKARKHKKRQLEDTYNLVVKKRKEYEEKMKVKGE 399 +KD E+L+K KADG LD + K E + VK Y+++ GE Sbjct: 538 VKDAEEELKKAKADGNLDDMKAKKDTLNEKVQAVAVKL---YQQQQSQGGE 585
>CNKR2_RAT (Q9Z1T4) Connector enhancer of kinase suppressor of ras 2| (Connector enhancer of KSR2) (CNK2) (Membrane-associated guanylate kinase-interacting protein) (MAGUIN) Length = 1032 Score = 29.3 bits (64), Expect = 8.2 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1 Query: 406 LVAHPLLSSFLHIPSFSSQQDYKYPQAVFSYVS*PYPEHHQPSSFPTSQSDPL*HLGPF 230 L+ PL SS LH +D +VFS + PEH + S+ PT + H GP+ Sbjct: 771 LIETPLTSSGLHYLQTLPLED-----SVFSDSAAISPEHRRQSTLPTQKCHLQDHYGPY 824
>CNKR2_MOUSE (Q80YA9) Connector enhancer of kinase suppressor of ras 2| (Connector enhancer of KSR2) (CNK2) Length = 1032 Score = 29.3 bits (64), Expect = 8.2 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1 Query: 406 LVAHPLLSSFLHIPSFSSQQDYKYPQAVFSYVS*PYPEHHQPSSFPTSQSDPL*HLGPF 230 L+ PL SS LH +D +VFS + PEH + S+ PT + H GP+ Sbjct: 771 LIETPLTSSGLHYLQTLPLED-----SVFSDSAAISPEHRRQSTLPTQKCHLQDHYGPY 824 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,148,981 Number of Sequences: 219361 Number of extensions: 1222017 Number of successful extensions: 3386 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 3187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3358 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
