>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = -3

Query: 530  SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRM--A 357
            ++ ++AEQ G E ERL    +  + Q +E  G++E E   +  L   +G+A+ D+ +  A
Sbjct: 969  AMEREAEQMGNELERLRAALMESQGQQQEERGQQERE---VARLTQERGRAQADLALEKA 1025

Query: 356  SSRSLSMQQKTSLRLQLVE 300
            +   L M+ + +L  Q VE
Sbjct: 1026 ARAELEMRLQNALNEQRVE 1044

>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC|
           1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde
           dehydrogenase 2) (NAGSA dehydrogenase 2)
          Length = 306

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +3

Query: 324 SFLLHTQTARRSHPDIVFGFP 386
           S LL   TA R HPD VFGFP
Sbjct: 76  SRLLDASTAHRIHPDWVFGFP 96

>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box|
           protein 54) (ATP-dependent RNA helicase DP97)
          Length = 881

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
 Frame = +1

Query: 58  KKRRRKEREGLVGRARDLCRERGEF-LRSEPE-QVGALGKGLPYQFFAGTLSECSNGVKG 231
           KK+  ++R G   +AR    E GEF +++E + +   LG G P   F    SEC++ V+ 
Sbjct: 22  KKKGLRKRRGAASQARGSDSEDGEFEIQAEDDARARKLGPGRPLPTF--PTSECTSDVE- 78

Query: 232 WQKV*Q**FPDVRSSPRLQH*RRSTS 309
                    PD R   R Q+ ++  S
Sbjct: 79  ---------PDTREMVRAQNKKKKKS 95

>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C|
          Length = 162

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 234 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHTQT 347
           AK+ A ++P C +LP      TFD  E ++S+ L+ QT
Sbjct: 66  AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103

>P3C2B_HUMAN (O00750) Phosphatidylinositol-4-phosphate 3-kinase C2|
           domain-containing beta polypeptide (EC 2.7.1.154)
           (Phosphoinositide 3-Kinase-C2-beta) (PtdIns-3-kinase C2
           beta) (PI3K-C2beta) (C2-PI3K)
          Length = 1634

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -2

Query: 204 KGSCEKLVW*PLPERAHLFRFRSQEFPPLPTQISSP 97
           +GSC+KL   PLP RA ++     + PPLP +  SP
Sbjct: 148 EGSCKKLSPPPLPPRASIW-----DTPPLPPRKGSP 178

>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)|
          Length = 629

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = -3

Query: 479 NWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSRSLSMQQKTSLRLQLVE 300
           NWS + K     +GG  +   NC   +  GK KAK  +   + + L+ ++ ++L L LV 
Sbjct: 439 NWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLN-ERNSTLTLALVW 497

Query: 299 RL 294
           +L
Sbjct: 498 QL 499

>FETP_PSEPK (Q88R49) Probable Fe(2+) trafficking protein|
          Length = 90

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = -2

Query: 471 DYREAASQRDW--WEKRVRIKLH-KNPKLREGESQKRYQ---DGFFAQFEYAAENFFAPP 310
           D  E  SQ+ W  W+K   + ++ K   +   E +K  Q   D FFA  EYA    + PP
Sbjct: 29  DIFEHISQKAWADWQKHQTMLINEKRLNMMNAEDRKFLQAEMDKFFAGEEYAQAEGYVPP 88

Query: 309 A 307
           A
Sbjct: 89  A 89

>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2|
          Length = 991

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = -2

Query: 522 SESRAERNRGRETRELVDYREAASQRDWWEKRVRIK-LHKNPKLREGESQKRYQ 364
           S+S+  ++ GRE R+++ + +   QR+   +R R + + +  + RE E ++R Q
Sbjct: 638 SKSQDRKSEGREKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQ 691

>RS10_CHLPN (Q9Z803) 30S ribosomal protein S10|
          Length = 105

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 291 LKTFDQLEAQRSFLLHTQTARRSHPDIVFGFPLPVV*DFYAIL 419
           LK FDQ +  RS     +TA+R+   +V   PLP   + Y +L
Sbjct: 12  LKGFDQGQLDRSTADIVETAKRTGARVVGPIPLPTKREVYTVL 54

>KHSE_ZYMMO (O69015) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 320

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -2

Query: 528 FESESRAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLREGESQKRYQDGFFA 349
           FE+ ++ E + G E ++ +DY +    +D     +   L  +  L EG+S K   D +FA
Sbjct: 158 FEAMNQIEAHMGDEVKKELDYLDKFWPKDLPRSVIHADLFPDNVLFEGDSLKGVIDFYFA 217

Query: 348 QFEYAA 331
             E  A
Sbjct: 218 CTEVRA 223

>REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonsense mRNA|
           reducing factor 3A) (Up-frameshift suppressor 3 homolog
           A) (hUpf3)
          Length = 476

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -2

Query: 513 RAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLRE 388
           R E  R R   E    +E   Q+   EK VRIKL K P+  E
Sbjct: 250 REEEKRRRREEERCKKKETDKQKKIAEKEVRIKLLKKPEKGE 291


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,887,538
Number of Sequences: 219361
Number of extensions: 1222570
Number of successful extensions: 3437
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3437
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)