>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  244 bits (622), Expect = 8e-65
 Identities = 121/123 (98%), Positives = 121/123 (98%)
 Frame = +2

Query: 47  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 226
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60

Query: 227 WKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 406
           WKGLAYDISDDQQDITRGKGIVDSL QAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGG
Sbjct: 61  WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGG 120

Query: 407 FYI 415
           FYI
Sbjct: 121 FYI 123

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  213 bits (543), Expect = 1e-55
 Identities = 109/125 (87%), Positives = 113/125 (90%), Gaps = 2/125 (1%)
 Frame = +2

Query: 47  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD- 223
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS  NRF VMA E +DE + TD 
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59

Query: 224 -KWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTM 400
            +WKGLAYDISDDQQDITRGKG VDSL QAPTGDGTHEAVLSSYEY+SQGLR YDFDNTM
Sbjct: 60  DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTM 119

Query: 401 GGFYI 415
           GGFYI
Sbjct: 120 GGFYI 124

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  179 bits (455), Expect = 2e-45
 Identities = 94/129 (72%), Positives = 108/129 (83%), Gaps = 6/129 (4%)
 Frame = +2

Query: 47  MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 214
           MAAAFSSTVGAPASTPT  +FLGKKL K QV++AV YHGKSS +N RF  MAA+ +DE +
Sbjct: 1   MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60

Query: 215 NTD--KWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDF 388
            TD  +WKGLAYDISDDQQDITRGKG+VD+L QAP GDGTH AVLSSY+Y+SQG + Y+F
Sbjct: 61  QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNF 120

Query: 389 DNTMGGFYI 415
           DN M GFYI
Sbjct: 121 DNMMDGFYI 129

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  168 bits (425), Expect = 5e-42
 Identities = 90/127 (70%), Positives = 101/127 (79%), Gaps = 4/127 (3%)
 Frame = +2

Query: 47  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 220
           MA+AFSSTVGAPASTPT FLGKK+K        YHG +   +R   VMAA+  +D+ + T
Sbjct: 1   MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54

Query: 221 D--KWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDN 394
           D  +WKGLAYDISDDQQDITRGKGIVDSL QAP GDGTHEA+LSSYEY+SQGLRKYDFDN
Sbjct: 55  DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 114

Query: 395 TMGGFYI 415
           TM G YI
Sbjct: 115 TMDGLYI 121

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  127 bits (318), Expect = 1e-29
 Identities = 68/118 (57%), Positives = 82/118 (69%)
 Frame = +2

Query: 62  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 241
           S  V APAST   FLGKK    V +   +   + K+N    + A   D++ + D+W+GLA
Sbjct: 23  SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75

Query: 242 YDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 415
           YD SDDQQDITRGKG+VDS+ QAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYI
Sbjct: 76  YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYI 133

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  125 bits (314), Expect = 4e-29
 Identities = 67/120 (55%), Positives = 83/120 (69%), Gaps = 2/120 (1%)
 Frame = +2

Query: 62  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 235
           SS+   P+ST   FLG  LKK     VN    +SK +  ++    ++DE + TDK  WKG
Sbjct: 22  SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73

Query: 236 LAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 415
           LA+D SDDQQDITRGKG VDSL QAP G GTH A++SSYEY+S GLR+Y+FDN M G+YI
Sbjct: 74  LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYI 133

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  125 bits (313), Expect = 5e-29
 Identities = 68/134 (50%), Positives = 88/134 (65%), Gaps = 11/134 (8%)
 Frame = +2

Query: 47  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 196
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 197 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGL 373
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+L QAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 374 RKYDFDNTMGGFYI 415
           R+Y+ DN M GFYI
Sbjct: 120 RQYNLDNNMDGFYI 133

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  125 bits (313), Expect = 5e-29
 Identities = 68/134 (50%), Positives = 88/134 (65%), Gaps = 11/134 (8%)
 Frame = +2

Query: 47  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 196
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 197 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGL 373
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+L QAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 374 RKYDFDNTMGGFYI 415
           R+Y+ DN M GFYI
Sbjct: 120 RQYNLDNNMDGFYI 133

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  122 bits (305), Expect = 4e-28
 Identities = 70/133 (52%), Positives = 83/133 (62%), Gaps = 16/133 (12%)
 Frame = +2

Query: 65  STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 202
           ST+GA   TP              T F GK LKK     V+    ++K+ R  V    ++
Sbjct: 6   STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64

Query: 203 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLR 376
           D K+ TD  +WKGL  D SDDQQDITRGKG+VDSL QAPTG GTH AVL SYEYVSQGLR
Sbjct: 65  DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 377 KYDFDNTMGGFYI 415
           +Y+ DN + GFYI
Sbjct: 125 QYNLDNKLDGFYI 137

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  120 bits (302), Expect = 1e-27
 Identities = 67/124 (54%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
 Frame = +2

Query: 56  AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 223
           + +++V   +   T F GK LKK     V+        NR   +AAE  + D K+ T  D
Sbjct: 17  SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73

Query: 224 KWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMG 403
           +WKGL  D SDDQQDI RGKG+VDSL QAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ 
Sbjct: 74  RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLD 133

Query: 404 GFYI 415
           GFYI
Sbjct: 134 GFYI 137

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  116 bits (290), Expect = 2e-26
 Identities = 63/117 (53%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = +2

Query: 74  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 244
           G  AS P++ F G  LKK ++S V  + K +  +   V A + I+E + T  D+W+GLAY
Sbjct: 22  GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80

Query: 245 DISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 415
           D+SDDQQDITRGKG+VDSL QAP   GTH AV+SS++Y+S GLR+Y+FDN   GFYI
Sbjct: 81  DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYI 137

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  115 bits (289), Expect = 3e-26
 Identities = 66/114 (57%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
 Frame = +2

Query: 77  APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 253
           A AS PT+ FLG  LKK           SS+    TV AAEN  E++NTDKW  LA D S
Sbjct: 23  AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77

Query: 254 DDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 415
           DDQ DI RGKG+VDSL QAP   GTH  + SS+EY SQGLRKYD DN +G FYI
Sbjct: 78  DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYI 131

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  115 bits (288), Expect = 4e-26
 Identities = 65/135 (48%), Positives = 82/135 (60%), Gaps = 14/135 (10%)
 Frame = +2

Query: 53  AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 190
           AA  ST+GA   T  N            FLG +LK      V+    +SK     F ++A
Sbjct: 2   AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55

Query: 191 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQG 370
            ++ +++   DKW+GLA+D SDDQQDITRGKG+ D L QAP G GTH AVLSSYEY+S G
Sbjct: 56  EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAG 115

Query: 371 LRKYDFDNTMGGFYI 415
           LR Y +DN + GFYI
Sbjct: 116 LRDYSYDNNVDGFYI 130

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  114 bits (285), Expect = 9e-26
 Identities = 64/135 (47%), Positives = 80/135 (59%), Gaps = 14/135 (10%)
 Frame = +2

Query: 53  AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 190
           AA  ST+GA +  P              T F GK LKK     V+       +NR   + 
Sbjct: 2   AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58

Query: 191 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQG 370
           A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSL QAPTG GTH A+++SYEYVSQ 
Sbjct: 59  AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQA 117

Query: 371 LRKYDFDNTMGGFYI 415
           L+ Y  DN + GFYI
Sbjct: 118 LKTYQLDNKLDGFYI 132

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  113 bits (283), Expect = 2e-25
 Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
 Frame = +2

Query: 74  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 244
           GA AS PT+ F G  LKK V S V  + K +  +   V A + I+E + T  D+WKGLAY
Sbjct: 22  GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80

Query: 245 DISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 415
           DISDDQQDITRGKG+VD L QAP   GTH AV+SSYEY+S GLR+   DN   GFYI
Sbjct: 81  DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYI 135

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
 Frame = +2

Query: 209 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLSQAPTG-DGTHEAVLSSYEYVSQGLRK 379
           ++   +W+ +    D SDDQQDITRG+ +VD L Q   G  GTH AVLSS EY+SQ   +
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 380 YDFDNTMGGFYI 415
             F+N   GFYI
Sbjct: 95  ASFNNIEDGFYI 106

>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC|
           3.1.3.48) (Protein tyrosine phosphatase PTP-BL)
           (Protein-tyrosine phosphatase RIP) (protein tyrosine
           phosphatase DPZPTP) (PTP36)
          Length = 2453

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +2

Query: 245 DISDDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYVSQGLRK 379
           D S   +D  RGKG+    S       THEA LS   +V++GL K
Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239

>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +2

Query: 77  APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 256
           +PA+ P+  +G+K++  V+   ++ G   K++   +   +    KR T ++ G  + +SD
Sbjct: 35  SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89

Query: 257 D--QQDITRGKGIVDSLSQAPTGDG 325
           D  ++ + R K  +D +  + T DG
Sbjct: 90  DTIRRMVRRRKERIDIIMPSKTKDG 114

>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -3

Query: 324 PSPVGAWESESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 178
           P+P+ AW++ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546

>IF2A_METJA (Q57581) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 266

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = +2

Query: 170 NRFTVMAAEN---IDEKRNTDKWKGLAYDISDDQQDIT--RGKGIVDSLSQAPTG 319
           N F  M  E    +D+   +++WK + Y+++ +  ++T    +G+++  S AP G
Sbjct: 138 NAFETMVIEGKEVLDDLEISEEWKNVLYEVAKESIELTNVEVEGVIEMKSYAPDG 192

>CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Castor-related|
           protein) (Fragment)
          Length = 255

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 23  QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 130
           QG PS     +  +   G+PA  P+ FLGK +K  V
Sbjct: 52  QGNPSLESFLSIKTEAEGSPAGEPSPFLGKAVKALV 87

>DHOM_HELPJ (Q9ZL20) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)|
          Length = 421

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 212 RNTDKWKGLAYDISDDQQDITRGKGI 289
           R+  K KG A++ISDD + +   KGI
Sbjct: 46  RDVKKHKGYAFEISDDLESVIEDKGI 71

>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)|
          Length = 1992

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 4   AHPPLLARSTKQHRDGCCLLLHRRGSG 84
           A  P L RST+Q   G C    RRGSG
Sbjct: 315 AELPSLRRSTRQKTTGSCASTSRRGSG 341

>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -2

Query: 412 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLGERVHDALPSGDVLLVVGDIVRK 236
           +EA  G  E V P+A+  V    +DG+V         ER  + + +G  ++V G+++ +
Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234

>SWC3_ASHGO (Q758T8) SWR1-complex protein 3|
          Length = 688

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +2

Query: 53  AAFSSTVGAPASTPTNF-LGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKW 229
           A  SST GAP      F  G  + K  TSA+  HG  S+      + AE     R   K+
Sbjct: 434 ATLSSTDGAPPLNRRQFPCGIWVTKMQTSALEAHGAISEKGTTITIKAEEGTAPRQKRKY 493

Query: 230 KGLAYDISDDQQDI 271
                ++ D+ + +
Sbjct: 494 TKRKKEVEDEDKSM 507

>KADA_METTL (P43410) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 192

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 23/96 (23%), Positives = 39/96 (40%)
 Frame = +2

Query: 74  GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 253
           G P    T    K ++K     +NY   +     F V   EN+ E R  D+ + L  D  
Sbjct: 10  GVPGVGGTTITQKAMEKLSEEGINYKMVNFGTVMFEVAQEENLVEDR--DQMRKLDPDTQ 67

Query: 254 DDQQDITRGKGIVDSLSQAPTGDGTHEAVLSSYEYV 361
              Q +  G+ I + + ++P    TH  + +   Y+
Sbjct: 68  KRIQKLA-GRKIAEMVKESPVVVDTHSTIKTPKGYL 102

>UP355_STAHJ (Q4L382) UPF0355 protein SH2586|
          Length = 135

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 293 DSLSQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 415
           D +S+  TG+   EAVL+ YE   +   KY  D   G F +
Sbjct: 59  DRMSKLLTGEDGEEAVLARYELSEEQTEKYKKDILDGKFLV 99

>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 251

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -2

Query: 412 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLGERVHDALPSGDVLLVVGDIVRKT 233
           +E   G  E + P+A  DVL+ AE G+       R+ E   DAL  G  ++  GD+ + T
Sbjct: 188 LEVDLGTFEELAPEAPEDVLLVAESGVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,188,278
Number of Sequences: 219361
Number of extensions: 956258
Number of successful extensions: 3615
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3606
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)