Clone Information

BLAST Search Result

Clone Name	bah63o24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PIF3_ARATH (O80536) Phytochrome-interacting factor 3 (Phytochrom...	47	4e-05
2	PIF4_ARATH (Q8W2F3) Phytochrome-interacting factor 4 (Basic heli...	45	1e-04
3	SPT_ARATH (Q9FUA4) Protein SPATULA	44	4e-04
4	EZRA_BACSU (O34894) Septation ring formation regulator ezrA	43	7e-04
5	SIL1_KLULA (Q6CKV0) Nucleotide exchange factor SIL1 precursor	39	0.011
6	EGL1_ARATH (Q9CAD0) Transcription factor EGL1 (ENHANCER OF GLABR...	39	0.014
7	TIG_LACAC (Q5FKR7) Trigger factor (TF)	37	0.068
8	HFR1_ARATH (Q9FE22) Long hypocotyl in far-red 1 (bHLH-like prote...	36	0.089
9	YL021_MIMIV (Q5UP97) Hypothetical sel1-like repeat protein L21	36	0.089
10	FILA_HUMAN (P20930) Filaggrin	36	0.089
11	IRF1_CHICK (Q90876) Interferon regulatory factor 1 (IRF-1)	36	0.12
12	MD1L1_HUMAN (Q9Y6D9) Mitotic spindle assembly checkpoint protein...	36	0.12
13	RX_DUGJA (O97039) Retinal homeobox protein Rax (DjRax) (Fragment)	35	0.26
14	CN044_HUMAN (Q96MY7) Protein C14orf44	33	0.58
15	NU4M_SQUAC (Q9ZZ45) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	33	0.76
16	BIM2_ARATH (Q9CAA4) Putative transcription factor BIM2 (BES1-int...	33	0.76
17	Y1873_AQUAE (O67720) Hypothetical protein aq_1873	33	0.99
18	SCA4_RICPR (Q9ZD49) Antigenic heat-stable 120 kDa protein (PS120...	32	1.3
19	FTSK_PASMU (Q9CP13) DNA translocase ftsK	32	1.3
20	YRY5_CAEEL (Q09355) Hypothetical protein T15H9.5	32	1.3
21	NU4M_SCYCA (O79410) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	32	1.7
22	MYH11_RABIT (P35748) Myosin-11 (Myosin heavy chain, smooth muscl...	32	1.7
23	MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscl...	32	1.7
24	DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-re...	32	1.7
25	NU4M_PONPY (P03908) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	32	1.7
26	FAS_HUMAN (P49327) Fatty acid synthase (EC 2.3.1.85) [Includes: ...	32	1.7
27	MYH11_HUMAN (P35749) Myosin-11 (Myosin heavy chain, smooth muscl...	32	2.2
28	POL_MLVAV (P03356) Pol polyprotein [Contains: Protease (EC 3.4.2...	32	2.2
29	RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Raba...	32	2.2
30	TFEB_HUMAN (P19484) Transcription factor EB	31	2.9
31	MRP6_RAT (O88269) Multidrug resistance-associated protein 6 (ATP...	31	2.9
32	MLX_MOUSE (O08609) Max-like protein X (Max-like bHLHZip protein)...	31	2.9
33	MLX_HUMAN (Q9UH92) Max-like protein X (Max-like bHLHZip protein)...	31	2.9
34	TFEB_MOUSE (Q9R210) Transcription factor EB	31	2.9
35	NU4M_HYLLA (P03909) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	31	2.9
36	NU4M_GORGO (P03907) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	31	2.9
37	FA53B_HUMAN (Q14153) Protein FAM53B	31	2.9
38	MSP1_PLAFM (P08569) Merozoite surface protein 1 precursor (Meroz...	31	3.7
39	MSP1_PLAFF (P13819) Merozoite surface protein 1 precursor (Meroz...	31	3.7
40	NU4M_LEMCA (Q34878) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	31	3.7
41	NU4M_HUMAN (P03905) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	31	3.7
42	FA53B_MOUSE (Q8BGR5) Protein FAM53B	31	3.7
43	CJ012_HUMAN (Q8N655) Protein C10orf12	31	3.7
44	INS_CHICK (P67970) Insulin precursor [Contains: Insulin B chain;...	30	4.9
45	POL_GALV (P21414) Pol polyprotein [Contains: Protease (EC 3.4.23...	30	4.9
46	YHS4_CAEEL (O18303) Hypothetical protein ZK849.4 in chromosome I	30	4.9
47	NU4M_PANPA (Q9T9W6) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	30	4.9
48	NU4M_LATCH (O03173) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	30	4.9
49	RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabapt...	30	4.9
50	CH602_ANASP (Q8YVS8) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE...	30	6.4
51	ATU_DROME (Q94546) Another transcription unit protein	30	6.4
52	POL_MLVFF (P26809) Pol polyprotein [Contains: Protease (EC 3.4.2...	30	6.4
53	POL_MLVRD (P11227) Pol polyprotein [Contains: Protease (EC 3.4.2...	30	6.4
54	POL_MLVMO (P03355) Pol polyprotein [Contains: Protease (EC 3.4.2...	30	6.4
55	APLP_DROME (Q9V496) Apolipophorins precursor (Retinoid- and fatt...	30	6.4
56	ALM1_SCHPO (Q9UTK5) Abnormal long morphology protein 1 (Sp8)	30	8.3
57	SNUT3_HUMAN (Q8WVK2) U4/U6.U5 tri-snRNP-associated protein 3 (U4...	30	8.3
58	SYFA_PROMT (Q46JK1) Phenylalanyl-tRNA synthetase alpha chain (EC...	30	8.3
59	NUAK1_HUMAN (O60285) NUAK family, SNF1-like kinase 1 (EC 2.7.11....	30	8.3
60	NU4M_PANTR (P03906) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	30	8.3
61	NU4M_BOVIN (P03910) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	30	8.3
62	CWC23_SCHPO (Q9P7C6) Pre-mRNA-splicing factor cwc23 (Complexed w...	30	8.3
63	MITF_MOUSE (Q08874) Microphthalmia-associated transcription factor	30	8.3
64	MITF_HUMAN (O75030) Microphthalmia-associated transcription factor	30	8.3

>PIF3_ARATH (O80536) Phytochrome-interacting factor 3 (Phytochrome-associated|
           protein 3) (Basic helix-loop-helix protein 8) (bHLH8)
           (AtbHLH008)
          Length = 524

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 26/82 (31%), Positives = 44/82 (53%)
 Frame = +2

Query: 296 KKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLP 475
           K+ RS+   +++E RRR  I++++R LQEL+PN  K+ K                     
Sbjct: 340 KRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK--------------------- 378

Query: 476 TNMSDMLDLAVDYIKELQMQIK 541
              + MLD A++Y+K LQ+Q++
Sbjct: 379 ---ASMLDEAIEYLKSLQLQVQ 397

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>PIF4_ARATH (Q8W2F3) Phytochrome-interacting factor 4 (Basic helix-loop-helix|
           protein 9) (bHLH9) (AtbHLH009) (Short under red-light 2)
          Length = 430

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
 Frame = +2

Query: 239 KQVRMAENSSRIQELVPNVKKDRS-SHRRS-------IAELRRRTEISKRVRNLQELVPN 394
           K++   + S  + + + N    RS S+RRS       ++E RRR  I++R++ LQEL+P+
Sbjct: 227 KRINHTDESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPH 286

Query: 395 MEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQIK 541
             K                        T+ + +LD A+DY+K LQ+Q++
Sbjct: 287 CSK------------------------TDKASILDEAIDYLKSLQLQLQ 311

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>SPT_ARATH (Q9FUA4) Protein SPATULA|
          Length = 373

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 24/92 (26%), Positives = 49/92 (53%)
 Frame = +2

Query: 296 KKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLP 475
           K+ R++   +++E RRR+ I+++++ LQ L+PN  K                        
Sbjct: 194 KRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK------------------------ 229

Query: 476 TNMSDMLDLAVDYIKELQMQIKTTDLVMALSL 571
           T+ + MLD A++Y+K+LQ+Q++   +   ++L
Sbjct: 230 TDKASMLDEAIEYLKQLQLQVQMLTMRNGINL 261

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>EZRA_BACSU (O34894) Septation ring formation regulator ezrA|
          Length = 562

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 32/128 (25%), Positives = 64/128 (50%)
 Frame = +2

Query: 176 RWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEI 355
           R  +IG+    +   ++ +H     + E  + I++ +  VKK+ + +R ++  LR+  E+
Sbjct: 355 RLDEIGKLLSSVKDKLDAEHVAYSLLVEEVASIEKQIEEVKKEHAEYRENLQALRKE-EL 413

Query: 356 SKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQ 535
             R     E + N++K I +T    K     ++PGI   P+++ +ML+ A  +I+E   Q
Sbjct: 414 QAR-----ETLSNLKKTISETARLLK---TSNIPGI---PSHIQEMLENAHHHIQETVNQ 462

Query: 536 IKTTDLVM 559
           +    L M
Sbjct: 463 LNELPLNM 470

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>SIL1_KLULA (Q6CKV0) Nucleotide exchange factor SIL1 precursor|
          Length = 490

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
 Frame = +2

Query: 110 RQIRPCQ-LPLCLDRKNVADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENS----SRI 274
           ++IRP Q LP  LD +   +K VR   + E   E + N E+D    V  AE S    S +
Sbjct: 91  KEIRPGQRLPPGLDIRVSLEKGVREAKLPEPGSENIGNEEEDVKGLVLGAEGSTLSESEL 150

Query: 275 QELVPNVKKDRSSHRRSIAE-----LRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPY 439
           +E   +++ ++S  + + AE     L++ T++   V +  E   N     + +    K  
Sbjct: 151 KETSEDLENEQSGFKLNNAEKESDILQQETDLKIAVSDNAEATSNEPAGHEFSEDFAKIK 210

Query: 440 TDMDLPG---INPLPTNMSDMLDLAVDYIKELQMQIKTTDLVMALSLVDSLKVMKEEEVI 610
           + M  P       + T + D+++ A DY K  ++     +L+  LS  D+L +   E   
Sbjct: 211 SLMQSPDEKTWEEVETLLDDLVEFAHDYKKGFKILSNEFELLEYLSFNDTLSIQIRELAA 270

Query: 611 CTCLPSKQNHSPA 649
              + S +N+ P+
Sbjct: 271 RIIVSSLRNNPPS 283

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>EGL1_ARATH (Q9CAD0) Transcription factor EGL1 (ENHANCER OF GLABRA3) (Basic|
           helix-loop-helix protein 2) (bHLH2) (AtbHLH002)
           (AtMyc-146)
          Length = 596

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 33/160 (20%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
 Frame = +2

Query: 188 IGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRV 367
           +GEK Q+++  I  +           ++ +EL+P+  ++  +H  +++E +RR ++++R 
Sbjct: 371 LGEKSQKMIKKILFE-------VPLMNKKEELLPDTPEETGNH--ALSEKKRREKLNERF 421

Query: 368 RNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQI--- 538
             L+ ++P++ KI K +I                        LD  ++Y+++LQ ++   
Sbjct: 422 MTLRSIIPSISKIDKVSI------------------------LDDTIEYLQDLQKRVQEL 457

Query: 539 ----KTTDLVMALSLVDSLKVMKEEE-VICTCLPSKQNHS 643
               ++ D    ++++   K   EEE     C+ SK+  S
Sbjct: 458 ESCRESADTETRITMMKRKKPDDEEERASANCMNSKRKGS 497

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>TIG_LACAC (Q5FKR7) Trigger factor (TF)|
          Length = 442

 Score = 36.6 bits (83), Expect = 0.068
 Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
 Frame = +2

Query: 152 KNVADKQVRW-TDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSI 328
           K++A K+  + T I E K + +P ++ + AK V   ++   + EL   +KKD    +  +
Sbjct: 225 KDLAGKEAHFATKIHEVKSKQLPELDDEFAKDVD--DSVDTLDELKEKIKKDLKDQKEQV 282

Query: 329 A-ELRRRTEISKRVRNLQ-ELVPNMEKIIKQTIGTP--KPYTDMDLPGINPLP----TNM 484
           A +  +   I   V+N   + +P  + +I++ + T   +   +M   GI+P      TN 
Sbjct: 283 ANDAIQEAAIEGAVKNATIDEIP--DAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNT 340

Query: 485 SDMLDLAVDYIKELQMQIKTTDLVMALSLVDSLKVMKEE 601
           ++   L   + K    ++KT  ++ A+   + LK  KEE
Sbjct: 341 TED-QLRSQFAKNAAERVKTNLVLEAIVAAEDLKATKEE 378

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>HFR1_ARATH (Q9FE22) Long hypocotyl in far-red 1 (bHLH-like protein HFR1)|
           (Reduced phytochrome signaling) (Basic helix-loop-helix
           FBI1 protein) (Basic helix-loop-helix protein 26)
           (bHLH26) (AtbHLH026) (Reduced sensitivity to far-red
           light)
          Length = 292

 Score = 36.2 bits (82), Expect = 0.089
 Identities = 28/113 (24%), Positives = 47/113 (41%)
 Frame = +2

Query: 218 NIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNM 397
           N +K   + +   + S      VP+V +  S  RR      R  ++S ++R LQ+LVPN 
Sbjct: 111 NPKKRRIQVLSSDDESEEFTREVPSVTRKGSKRRR------RDEKMSNKMRKLQQLVPNC 164

Query: 398 EKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQIKTTDLV 556
            K                        T+   +LD  ++Y+K LQ+Q++    V
Sbjct: 165 HK------------------------TDKVSVLDKTIEYMKNLQLQLQMMSTV 193

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>YL021_MIMIV (Q5UP97) Hypothetical sel1-like repeat protein L21|
          Length = 533

 Score = 36.2 bits (82), Expect = 0.089
 Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 17/149 (11%)
 Frame = +2

Query: 125 CQLPLCLDRKNVADKQVRWTDIGEKKQELVPN----IEKDHAKQVRMAENSSRIQELVPN 292
           C++ LC   +N+  K + WT+  +    L+ +    I+ +H   +R  ++++    L+P 
Sbjct: 366 CRVKLCEKLENIILKFIDWTNKLQNNSLLLLSCLSFIDDNHNVSIRHHQHTT---GLIPY 422

Query: 293 VK-------------KDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPK 433
           VK             K+  S    I ++   T++++   +LQ L  N + ++K ++ + +
Sbjct: 423 VKQHEFRNKKFITFDKENVSFVNEIIDITNGTDMNEWFESLQFLKLNYQNLMKTSMNSSR 482

Query: 434 PYTDMDLPGINPLPTNMSDMLDLAVDYIK 520
            Y D+ L  I  L T++    +L  D I+
Sbjct: 483 IYKDLIL--IQNLETDIEKYCELMFDEIE 509

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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 36.2 bits (82), Expect = 0.089
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
 Frame = +1

Query: 262  QQSDTGAGTQRKKGSLIT*KKHR*AAEEDGDQQAGAES------ARACPQHGEDN*TNYW 423
            Q    G+ T R++GS ++  +      ED ++++ + S      AR   +HG  N  ++ 
Sbjct: 1578 QGESAGSKTSRRQGSSVSQDRDSEGHSEDSERRSESASRNHYGSAREQSRHGSRNPRSHQ 1637

Query: 424  NAKAIH*HGSARN*STANQHVRHVGSG---C*LHKGTPDADQDHGPRHGAFAC*FTKGDE 594
              +A H H +  +  +  +H      G       +      + HG RH   A   T    
Sbjct: 1638 EDRASHGHSAESSRQSGTRHAETSSGGQAASSQEQARSSPGERHGSRHQQSADSSTDSGT 1697

Query: 595  GRRGDLHVLAE 627
            GRR D  V+ +
Sbjct: 1698 GRRQDSSVVGD 1708

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>IRF1_CHICK (Q90876) Interferon regulatory factor 1 (IRF-1)|
          Length = 313

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
 Frame = +2

Query: 212 VPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVP 391
           +P+IE+   K +    ++ R+  ++P + KD+   R+S +    R   +K  R L E + 
Sbjct: 88  LPDIEEVKDKSINKGSSAVRVYRMLPPLTKDQKKERKSKSSREAR---NKSKRKLYEDM- 143

Query: 392 NMEKIIKQTIGTPKP-----YTDMDLPGINPLPTNMSDMLDLA 505
            ME+  ++   TP P     YT  D  G      N S  LDL+
Sbjct: 144 RMEESAERLTSTPLPDDHSSYTAHDYTGQEVEVENTSITLDLS 186

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>MD1L1_HUMAN (Q9Y6D9) Mitotic spindle assembly checkpoint protein MAD1 (Mitotic|
           arrest deficient-like protein 1) (MAD1-like 1) (Mitotic
           checkpoint MAD1 protein-homolog) (HsMAD1) (hMAD1)
           (Tax-binding protein 181)
          Length = 718

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
 Frame = +2

Query: 155 NVADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAE 334
           +V D+++R   +  +KQEL   ++  H K     E + +IQEL  + ++ R+ H + I +
Sbjct: 172 SVMDQEMRVKRLESEKQELQEQLDLQHKK---CQEANQKIQELQAS-QEARADHEQQIKD 227

Query: 335 LRRRTEISKR----VRNLQ-ELV--PNMEKIIKQ 415
           L ++  + ++    V+N++ ELV  P +E+ +KQ
Sbjct: 228 LEQKLSLQEQDAAIVKNMKSELVRLPRLERELKQ 261

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>RX_DUGJA (O97039) Retinal homeobox protein Rax (DjRax) (Fragment)|
          Length = 268

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 3/135 (2%)
 Frame = +2

Query: 68  QSPRIFGRAAQIRPRQIRPCQLPLCLDRKNVADKQVRWTDIGEKKQELVPNIEKDHAKQV 247
           QSP I    ++    +  P QL  C    N   ++ R T    +  EL    EK H   V
Sbjct: 63  QSPAI----SEADETESSPDQLSNC----NKKHRRNRTTFTTYQLHELERAFEKSHYPDV 114

Query: 248 RMAENSSRIQELVPNVKKDR-SSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTI- 421
              E  + ++  +P V+      +RR+    + + E +    NLQE+ PN+ K +  ++ 
Sbjct: 115 YSREELA-MKISLPEVRVQVWFQNRRAKWRRQEKIEAANHTHNLQEVFPNVGKSLTSSLF 173

Query: 422 -GTPKPYTDMDLPGI 463
              P P+ +M LP +
Sbjct: 174 PANPYPFLNMSLPSV 188

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>CN044_HUMAN (Q96MY7) Protein C14orf44|
          Length = 647

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
 Frame = +2

Query: 44  PAAAPIPGQSPRIFGRA---AQIRPRQI------RPCQLPLCLDRKNVADKQVRWTDIGE 196
           P A P+P +S  + G A   A   P  I      R   +   L++KN AD+ ++W +I  
Sbjct: 429 PPATPLP-RSRSLSGLASLSANTLPVHITDATRKRESAVRSALEKKNKADESIQWLEIHR 487

Query: 197 KKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKR 364
           KK + +       AK   M  + S  +     +K++R++ R+   E ++  E  K+
Sbjct: 488 KKSQAMSKSVTLRAK--AMDPHKSLEEVFKAKLKENRNNDRKRAKEYKKELEEMKQ 541

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>NU4M_SQUAC (Q9ZZ45) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 460

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 25/121 (20%), Positives = 54/121 (44%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + +++  +    +  F    +  V++ SS  L
Sbjct: 219 KAHVEAPIAGSMILAAVLLKLGGYGMMRIIVMLNPLTKEMAYPFLILAIWGVIMTSSICL 278

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFSMLGTSSCFFSPISVHLTCLSATFFLSK 142
              D +S     + S + L+  AI+    WSF+   T       +S  L CL+ T +   
Sbjct: 279 RQTDLKSLIAYSSVSHMGLVAGAIMIQTPWSFAGAITLMIAHGLVSSALFCLANTNYERT 338

Query: 141 H 139
           H
Sbjct: 339 H 339

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>BIM2_ARATH (Q9CAA4) Putative transcription factor BIM2 (BES1-interacting|
           Myc-like protein 2) (Transcription factor EN 125)
           (AtbHLH 102)
          Length = 311

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = +2

Query: 305 RSSHRRSIAELRRRTEISKRVRNLQELVPNMEK 403
           RS H  S+ E RRR++I++R + L+EL+PN E+
Sbjct: 47  RSKH--SVTEQRRRSKINERFQILRELIPNSEQ 77

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>Y1873_AQUAE (O67720) Hypothetical protein aq_1873|
          Length = 407

 Score = 32.7 bits (73), Expect = 0.99
 Identities = 27/135 (20%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
 Frame = +2

Query: 200 KQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQ 379
           K+E + ++E +  K+ ++ E    I E VP   ++    +  ++E++ +TE      + +
Sbjct: 266 KKEEIKSMETEEVKEEKVREE---IPEEVPQEVEEIKEEKPEMSEIKEKTEAI----STK 318

Query: 380 ELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAV-DYIKELQMQIKTTDLV 556
           E  P   +++ + +   K    + +  I+     + + +   V DYIK +   I   ++ 
Sbjct: 319 EKTPEAVQVLAEKLSDEKFIRSLLVEAISKELHGVREEIKAEVRDYIKNVLESIIREEIE 378

Query: 557 MALSLVDSLKVMKEE 601
            A + V   K+++EE
Sbjct: 379 RAFAEVGVAKIIREE 393

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>SCA4_RICPR (Q9ZD49) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa|
           antigen) (Protein PS 120)
          Length = 1022

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
 Frame = +2

Query: 197 KKQELVPNIEKDHAKQVRM----AENSSRIQE---------LVPNVKKDRSSHRRSIAEL 337
           K +E++  +  +H + V +    AE+ + +Q          ++PN + + S  + +  ++
Sbjct: 311 KYKEMMKEVALNHGQSVALSQTIAEDLTHVQGPSHETHKPIIIPNQELESSIEQHTSQQV 370

Query: 338 RRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYI 517
              T  +K ++     +  ++    Q+ G P P     L   N L T+M D+L+    Y+
Sbjct: 371 PPITTFNKSLQPKISQIHQLQPQQAQSSGIPNPV----LNAANALSTSMQDLLNNINSYL 426

Query: 518 KELQMQIKTTDLV--MALSLVDSLK 586
            + Q   K +DL+   A++++++ K
Sbjct: 427 TKNQDINKQSDLIKEAAIAILNNKK 451

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>FTSK_PASMU (Q9CP13) DNA translocase ftsK|
          Length = 930

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
 Frame = +2

Query: 194 EKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRN 373
           + K+  +P +  D   QV +   +   +  +P+V         S+A +   T +S     
Sbjct: 259 QAKESTIPTVPLDDVNQVELGGYAVEPELALPSV---------SVAFVED-TALSSSEAE 308

Query: 374 LQELVPNMEKIIKQTIGTPKPYTDMDLP--GINPLPTNMSDMLDLAVDYIKELQMQIKTT 547
            ++  P   +I   T G P   T+  +P   ++PL T++SD  ++A +   +L  Q    
Sbjct: 309 HEDSKPFTTQI-PHTAGEPLVATEFAMPKVSLSPLDTSLSDNSEIAREDESDLARQFAAQ 367

Query: 548 DLVMALSLVDSLKVMKEEEVICTCL--PSKQNHSPAD 652
           +      +    K +  EE + T L  P  + +S AD
Sbjct: 368 EQQRREEMALRAKALNAEEALQTILAEPEIRQNSTAD 404

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>YRY5_CAEEL (Q09355) Hypothetical protein T15H9.5|
          Length = 173

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 12/113 (10%)
 Frame = +2

Query: 110 RQIRPCQLPLCLDRKNVADKQVRWTDIGEKKQELVPN----IEKDHAKQVRMAENSSRIQ 277
           + +  C+ P+  ++K    K +    +  KK+E        +EKD  K+V+   N   ++
Sbjct: 56  KSVEECKKPVSPEKKKSPIKVLSEKKLKSKKKEEDKEPDEKVEKDVKKEVKADNNEPLVK 115

Query: 278 ELV--------PNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIK 412
            L          N K D  SH+      ++ +   K++RN      ++EK+ K
Sbjct: 116 NLKIAKKEQEEENPKTDLESHKDEAEAKKKESRRQKKMRNKNSKEGSVEKMEK 168

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>NU4M_SCYCA (O79410) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 460

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 25/121 (20%), Positives = 54/121 (44%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + +++  +    +  F    +  +++ SS  L
Sbjct: 219 KAHVEAPIAGSMILAAVLLKLGGYGMMRIIIMLNPITKEMAYPFIILAIWGIVMTSSICL 278

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFSMLGTSSCFFSPISVHLTCLSATFFLSK 142
              D +S     + S + L+  AIL    WSF+   T       +S  L CL+ T +   
Sbjct: 279 RQTDLKSMIAYSSVSHMGLVAGAILIQTPWSFAGAITLMIAHGLVSSALFCLANTNYERI 338

Query: 141 H 139
           H
Sbjct: 339 H 339

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>MYH11_RABIT (P35748) Myosin-11 (Myosin heavy chain, smooth muscle isoform)|
            (SMMHC)
          Length = 1972

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
 Frame = +2

Query: 152  KNVADKQVRWTDIGEK----KQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHR 319
            +N A+KQ R  D+GE+    K EL   ++    +Q   A+    +  L   + ++  SH 
Sbjct: 1134 RNKAEKQKR--DLGEELEALKTELEDTLDTTATQQELRAKREQEVTVLKKALDEETRSHE 1191

Query: 320  RSIAELRRR-----TEISKRVRNLQELVPNMEKIIKQTI 421
              + E+R++      E+++++   +    N++K  KQT+
Sbjct: 1192 AQVQEMRQKHTQVVEELTEQLEQFKRAKANLDK-TKQTL 1229

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>MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscle isoform)|
            (SMMHC)
          Length = 1972

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
 Frame = +2

Query: 152  KNVADKQVRWTDIGEK----KQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHR 319
            +N A+KQ R  D+GE+    K EL   ++    +Q   A+    +  L   + ++  SH 
Sbjct: 1134 RNKAEKQKR--DLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHE 1191

Query: 320  RSIAELRRR-----TEISKRVRNLQELVPNMEKIIKQTI 421
              + E+R++      E+++++   +    N++K  KQT+
Sbjct: 1192 AQVQEMRQKHTQAVEELTEQLEQFKRAKANLDK-SKQTL 1229

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>DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2)
          Length = 1101

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 16/78 (20%), Positives = 37/78 (47%)
 Frame = +2

Query: 242 QVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTI 421
           + ++ E+  +  E      ++ ++ + + AEL++R E  K +    + +    +++  + 
Sbjct: 487 KAKVEESEQKAAEFSKKFDEEFTARQEAQAELQKRDEKIKELEAEIQQLRTQAQVLSSSS 546

Query: 422 GTPKPYTDMDLPGINPLP 475
           G P P     LPG+ P P
Sbjct: 547 GIPGPPAAPPLPGVGPPP 564

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>NU4M_PONPY (P03908) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 26/121 (21%), Positives = 54/121 (44%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + +I+  +    +  F    L  +++ SS  L
Sbjct: 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRLTIILDPLTKHMAYPFLVLSLWGMIMTSSICL 277

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFSMLGTSSCFFSPISVHLTCLSATFFLSK 142
              D +S     + S + L+ +AIL    WSF+   T        S  L CL+ + +   
Sbjct: 278 RQTDLKSLIAYSSVSHMALVVAAILIQTPWSFTGATTLMIAHGLTSSLLFCLANSNYERT 337

Query: 141 H 139
           H
Sbjct: 338 H 338

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>FAS_HUMAN (P49327) Fatty acid synthase (EC 2.3.1.85) [Includes:|
            [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38);
            [Acyl-carrier-protein] S-malonyltransferase (EC
            2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC
            2.3.1.41); 3-oxoacyl-[acyl-
          Length = 2511

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 378  KSLSPTWRR*LNKLLERQSHTLTWICQELIHCQPTCP 488
            K   PT    ++ L      ++ W+C  L H QPTCP
Sbjct: 1523 KPEEPTAHAFVSTLTRGDLSSIRWVCSSLRHAQPTCP 1559

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>MYH11_HUMAN (P35749) Myosin-11 (Myosin heavy chain, smooth muscle isoform)|
            (SMMHC)
          Length = 1972

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
 Frame = +2

Query: 152  KNVADKQVRWTDIGEK----KQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHR 319
            +N A+KQ R  D+GE+    K EL   ++    +Q   A+    +  L   + ++  SH 
Sbjct: 1134 RNKAEKQKR--DLGEELEALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHE 1191

Query: 320  RSIAELRRR-----TEISKRVRNLQELVPNMEKIIKQTI 421
              + E+R++      E+++++   +    N++K  KQT+
Sbjct: 1192 AQVQEMRQKHAQAVEELTEQLEQFKRAKANLDK-NKQTL 1229

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>POL_MLVAV (P03356) Pol polyprotein [Contains: Protease (EC 3.4.23.-); Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 1196

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 30/111 (27%), Positives = 54/111 (48%)
 Frame = +2

Query: 122 PCQLPLCLDRKNVADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKK 301
           P  +PL      V+ KQ   +   E K  + P+I++   + + +   S     L+P VKK
Sbjct: 167 PLIIPLKATSTPVSIKQYPMSQ--EAKLGIKPHIQRLLDQGILVPCQSPWNTPLLP-VKK 223

Query: 302 DRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDL 454
             ++  R + +LR   E++KRV ++   VPN   ++     + + YT +DL
Sbjct: 224 PGTNDYRPVQDLR---EVNKRVEDIHPTVPNPYNLLSGLPPSHRWYTVLDL 271

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>RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Rabaptin-5)|
           (Rabaptin-5alpha)
          Length = 862

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
 Frame = +2

Query: 176 RWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEI 355
           +W +     Q ++    +D+  Q  +     R Q       + R S  R IA+LRRR   
Sbjct: 109 QWREEVASLQAIMKETVRDYEHQFHLRLEQERAQWA-----QYRESAEREIADLRRRLSE 163

Query: 356 SKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDML-DLAVDYIKELQM 532
            +   NL+  +   ++  ++      P  + ++  +    T   D + +L    +KEL  
Sbjct: 164 GQEEENLENEMKKAQEDAEKLRSVVMP-MEKEIAALKDKLTEAEDKIKELEASKVKELNH 222

Query: 533 QIKT-----TDLVMALSLVDSLKVMKEEE 604
            ++      TDL M ++++++ K + +E+
Sbjct: 223 YLEAEKSCRTDLEMYVAVLNTQKSVLQED 251

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>TFEB_HUMAN (P19484) Transcription factor EB|
          Length = 476

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
 Frame = +2

Query: 101 IRPRQIRPCQLPLCLDRKNV--ADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSSRI 274
           I P    P  LPL     NV  +D QV  + +G        ++ +   +++  AE+ +  
Sbjct: 174 INPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQK--RELTDAESRALA 231

Query: 275 QELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDL 454
           +E     KKD      ++ E RRR  I+ R++ L  L+P                 D+D 
Sbjct: 232 KE---RQKKDN----HNLIERRRRFNINDRIKELGMLIPKA--------------NDLD- 269

Query: 455 PGINPLPTNMSDMLDLAVDYIKELQMQIK 541
                +  N   +L  +VDYI+ +Q  ++
Sbjct: 270 -----VRWNKGTILKASVDYIRRMQKDLQ 293

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>MRP6_RAT (O88269) Multidrug resistance-associated protein 6 (ATP-binding|
           cassette sub-family C member 6) (MRP-like protein 1)
           (MLP-1)
          Length = 1502

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = -2

Query: 267 LLFSAILTCLAWSFSMLGTSSCFFSPISVHLTCLSATFFLSKHRGSWQGRIWRGRIWAAR 88
           LLF  I+ C  + + +LG S+   + ++V L+ L   FF++K R   Q    R +   AR
Sbjct: 430 LLFLWIIVCFVYLWQLLGPSA--LTAVAVFLSLLPLNFFITKKRSFHQEEQMRQKASRAR 487

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>MLX_MOUSE (O08609) Max-like protein X (Max-like bHLHZip protein) (BigMax|
           protein) (Protein Mlx) (Transcription factor-like
           protein 4)
          Length = 298

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
 Frame = +2

Query: 176 RWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEI 355
           R   IG      VPN +          E+S   QE      KDR     + AE +RR  I
Sbjct: 95  RANSIGSTSASSVPNTDD---------EDSDYQQEAYKESYKDRRRRAHTQAEQKRRDAI 145

Query: 356 SKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQ 535
            +   +LQ +VP  ++    +IG+ K               + + +L   +DYI+ L  +
Sbjct: 146 KRGYDDLQTIVPTCQQ-QDFSIGSQK--------------LSKAIVLQKTIDYIQFLHKE 190

Query: 536 IKTTDLVMALSLVD--SLKVMK 595
            K  +  ++    D  +LK+MK
Sbjct: 191 KKKQEEEVSTLRKDVTALKIMK 212

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>MLX_HUMAN (Q9UH92) Max-like protein X (Max-like bHLHZip protein) (BigMax|
           protein) (Protein Mlx) (Transcription factor-like
           protein 4)
          Length = 298

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
 Frame = +2

Query: 176 RWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEI 355
           R   IG      VPN +          E+S   QE      KDR     + AE +RR  I
Sbjct: 95  RANSIGSTSASSVPNTDD---------EDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAI 145

Query: 356 SKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQ 535
            +   +LQ +VP  ++    +IG+ K               + + +L   +DYI+ L  +
Sbjct: 146 KRGYDDLQTIVPTCQQ-QDFSIGSQK--------------LSKAIVLQKTIDYIQFLHKE 190

Query: 536 IKTTDLVMALSLVD--SLKVMK 595
            K  +  ++    D  +LK+MK
Sbjct: 191 KKKQEEEVSTLRKDVTALKIMK 212

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>TFEB_MOUSE (Q9R210) Transcription factor EB|
          Length = 475

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
 Frame = +2

Query: 101 IRPRQIRPCQLPLCLDRKNV--ADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSSRI 274
           I P    P  LPL     NV   D QV  + +G        ++ +   +++  AE+ +  
Sbjct: 173 INPEMQMPNTLPLSSSHLNVYSGDPQVTASMVGVTSSSCPADLTQK--RELTDAESRALA 230

Query: 275 QELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDL 454
           +E     KKD      ++ E RRR  I+ R++ L  L+P                 D+D 
Sbjct: 231 KE---RQKKDN----HNLIERRRRFNINDRIKELGMLIPKA--------------NDLD- 268

Query: 455 PGINPLPTNMSDMLDLAVDYIKELQMQIK 541
                +  N   +L  +VDYI+ +Q  ++
Sbjct: 269 -----VRWNKGTILKASVDYIRRMQKDLQ 292

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>NU4M_HYLLA (P03909) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/93 (22%), Positives = 45/93 (48%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + LI+  +    +  F    L  +++ SS  L
Sbjct: 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILSPLTKHMAYPFLMLSLWGMIMTSSICL 277

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFS 223
              D +S     + S + L+ +AIL    WSF+
Sbjct: 278 RQTDLKSLIAYSSVSHMALVITAILIQTPWSFT 310

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>NU4M_GORGO (P03907) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/93 (22%), Positives = 45/93 (48%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + LI+  +    +  F    L  +++ SS  L
Sbjct: 218 KAHVEAPIAGSMMLAAVLLKLGGYGMMRLMLILNPLTKHMAYPFLALSLWGMIMTSSISL 277

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFS 223
              D +S     + S + L+ +AIL    WSF+
Sbjct: 278 RQTDLKSLIAYSSISHMALVVAAILIQTPWSFT 310

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>FA53B_HUMAN (Q14153) Protein FAM53B|
          Length = 422

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +2

Query: 35  FCPPAAAPIPGQSPRIFGRAAQIRPRQIRPCQLPLCLDRKNVADKQVRWTDIGEKKQEL 211
           +CPP+A   P  +P +  R++ +   + +PC     L+ K V  K+ R  ++ E++  L
Sbjct: 241 YCPPSANSTPASTPELARRSSGLSRSRSQPC----VLNDKKVGVKRRRPEEVQEQRPSL 295

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>MSP1_PLAFM (P08569) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (P190)
          Length = 1701

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
 Frame = +2

Query: 155 NVADKQVRWTDIGEKKQELVPNIEK---------DHAKQVRMAENSSRIQELVPNV---K 298
           N+ D   +  D  +K +  + NI +         D  K     E   ++ +   N+    
Sbjct: 224 NIKDNVGKMEDYIKKNKTTIANINELIEGSKKTIDQNKNADNEEGKKKLYQAQYNLFIYN 283

Query: 299 KDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGI----N 466
           K        I+ L +R +  K+  N+++L+ +++KI           TD + P      N
Sbjct: 284 KQLQEAHNLISVLEKRIDTLKKNENIKKLLEDIDKI----------KTDAENPTTGSKPN 333

Query: 467 PLPTNMSDMLDLAVDYIKELQMQIK 541
           PLP N    ++   + IKE+   IK
Sbjct: 334 PLPENKKKEVEGHEEKIKEIAKTIK 358

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>MSP1_PLAFF (P13819) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA)
          Length = 1701

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
 Frame = +2

Query: 155 NVADKQVRWTDIGEKKQELVPNIEK---------DHAKQVRMAENSSRIQELVPNV---K 298
           N+ D   +  D  +K +  + NI +         D  K     E   ++ +   N+    
Sbjct: 224 NIKDNVGKMEDYIKKNKTTIANINELIEGSKKTIDQNKNADNEEGKKKLYQAQYNLFIYN 283

Query: 299 KDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGI----N 466
           K        I+ L +R +  K+  N+++L+ +++KI           TD + P      N
Sbjct: 284 KQLQEAHNLISVLEKRIDTLKKNENIKKLLEDIDKI----------KTDAENPTTGSKPN 333

Query: 467 PLPTNMSDMLDLAVDYIKELQMQIK 541
           PLP N    ++   + IKE+   IK
Sbjct: 334 PLPENKKKEVEGHEEKIKEIAKTIK 358

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>NU4M_LEMCA (Q34878) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 21/92 (22%), Positives = 43/92 (46%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + +I+  M    +  F    L  +++ SS  L
Sbjct: 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRITMILNPMTKYMAYPFLMLCLWGMIMTSSICL 277

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSF 226
              D +S     + S + L+  AIL    WSF
Sbjct: 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSF 309

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>NU4M_HUMAN (P03905) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 21/93 (22%), Positives = 45/93 (48%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + LI+  +    +  F    L  +++ SS  L
Sbjct: 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICL 277

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFS 223
              D +S     + S + L+ +AIL    WSF+
Sbjct: 278 RQTDLKSLIAYSSISHMALVVTAILIQTPWSFT 310

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>FA53B_MOUSE (Q8BGR5) Protein FAM53B|
          Length = 422

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +2

Query: 35  FCPPAAAPIPGQSPRIFGRAAQIRPRQIRPCQLPLCLDRKNVADKQVRWTDIGEKKQEL 211
           +CPP+A   P  +P +  R++ +   + +PC     L+ K +  K+ R  ++ E++  L
Sbjct: 242 YCPPSANSTPASTPELARRSSGLARSRSQPC----VLNDKKIGVKRRRPDEVQEQRPSL 296

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>CJ012_HUMAN (Q8N655) Protein C10orf12|
          Length = 1247

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
 Frame = +2

Query: 41   PPAAAPIPGQSPR-IFGRAAQIRPRQIRPCQLPLCLDRKNVADKQVRWTDIGEKKQELVP 217
            PP   P+   +P  ++  + Q    +    + P     KN    Q  W    E   +   
Sbjct: 901  PPVKHPLQKYAPSSLYPSSLQAERLKKHLKKFPGATPAKNNWKMQKLWAKFRENPDQ--- 957

Query: 218  NIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNM 397
             +E +    V    NS   ++ +  VK+DR+SH  +       T I ++  N++  +   
Sbjct: 958  -VEPEDGSDVSPGPNS---EDSIEEVKEDRNSHPPANLPTPASTRILRKYSNIRGKLRAQ 1013

Query: 398  EKIIK-QTIGTPKPYTDMDLPG-----INPLPTNMSDMLDLAVD 511
            +++IK + +  P        P      INPL   MS  L L VD
Sbjct: 1014 QRLIKNEKMECPDALAVESKPSRKSVCINPL---MSPKLALQVD 1054

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>INS_CHICK (P67970) Insulin precursor [Contains: Insulin B chain; Insulin A|
           chain]
          Length = 107

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -2

Query: 447 MSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAMLLLCDERSFF 295
           M+++   +P++ L++FS  GTS       L  S L+   A+ L+C ER FF
Sbjct: 1   MALWIRSLPLLALLVFSGPGTSYAAANQHLCGSHLV--EALYLVCGERGFF 49

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>POL_GALV (P21414) Pol polyprotein [Contains: Protease (EC 3.4.23.-); Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 1165

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 33/122 (27%), Positives = 57/122 (46%)
 Frame = +2

Query: 89  RAAQIRPRQIRPCQLPLCLDRKNVADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSS 268
           RA      Q+ P  + L      VA +Q   +   E ++ + P+I+K     V +   S 
Sbjct: 153 RAGMGLANQVPPVVVELRSGASPVAVRQYPMSK--EAREGIRPHIQKFLDLGVLVPCRSP 210

Query: 269 RIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDM 448
               L+P VKK  ++  R + +LR   EI+KRV+++   VPN   ++     +   Y+ +
Sbjct: 211 WNTPLLP-VKKPGTNDYRPVQDLR---EINKRVQDIHPTVPNPYNLLSSLPPSYTWYSVL 266

Query: 449 DL 454
           DL
Sbjct: 267 DL 268

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>YHS4_CAEEL (O18303) Hypothetical protein ZK849.4 in chromosome I|
          Length = 602

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +2

Query: 41  PPAAA---PIPGQSPRIFGRAAQIRPRQIR 121
           PPA A   PIP Q P++ G AA   PRQ +
Sbjct: 567 PPAEANRAPIPNQQPQVNGNAAPASPRQAK 596

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>NU4M_PANPA (Q9T9W6) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 21/93 (22%), Positives = 45/93 (48%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + LI+  +    +  F    L  +++ SS  L
Sbjct: 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLMLSLWGMIMTSSICL 277

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFS 223
              D +S     + S + L+ +AIL    WSF+
Sbjct: 278 RQTDLKSLIAYSSVSHMALVVTAILIQTPWSFT 310

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>NU4M_LATCH (O03173) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 461

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 24/121 (19%), Positives = 51/121 (42%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + +++  M  T +  F    L  +++  S  L
Sbjct: 219 KAHVEAPIAGSMVLAAVLLKLGGYGMMRLIMMLAPMTKTLAYPFIILALWGIIMTGSICL 278

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFSMLGTSSCFFSPISVHLTCLSATFFLSK 142
              D +S     +   + L+ + ILT   W F+            S  L CL+ T +   
Sbjct: 279 RQTDLKSLIAYSSVGHMGLVAAGILTQTPWGFTGATVLMIAHGLTSSALFCLANTNYERT 338

Query: 141 H 139
           H
Sbjct: 339 H 339

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>RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabaptin-5)|
           (Rabaptin-5alpha)
          Length = 862

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
 Frame = +2

Query: 176 RWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEI 355
           +W +     Q ++    +D+  Q  +     R Q       + R S  R IA+LRRR   
Sbjct: 109 QWREEVASLQAVMKETVRDYEHQFHLRLEQERAQWA-----QYRESADREIADLRRRLSE 163

Query: 356 SKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDML-DLAVDYIKELQM 532
            +   NL+  +   ++  ++      P  + ++  +    T   D + +L    +KEL  
Sbjct: 164 GQEEENLENEMKKAQEDAEKLRSVVMP-MEKEIAALKDKLTEAEDKIKELEASKVKELNH 222

Query: 533 QIKT-----TDLVMALSLVDSLKVMKEEE 604
            ++      TDL M ++++++ K + +E+
Sbjct: 223 YLEAEKSCRTDLEMYVAVLNTQKSVLQED 251

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>CH602_ANASP (Q8YVS8) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 560

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
 Frame = +2

Query: 185 DIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDR--------SSHRRSIAELR 340
           ++G    + V  + KD    V  +++ +   E+V  ++ DR        +++ R   EL 
Sbjct: 155 EVGAMIAQAVEKVTKDGVITVEESKSLTTELEVVEGMQIDRGYISPYFITNNERQTVELE 214

Query: 341 --RRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPG 460
             R     K++ ++QELVP +EK+ +  +G P      D+ G
Sbjct: 215 NVRILITDKKISSIQELVPVLEKVAR--LGQPLLIIAEDVEG 254

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>ATU_DROME (Q94546) Another transcription unit protein|
          Length = 725

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
 Frame = +1

Query: 229 GPCQAGEDGGEQQSDTGAGTQRKKGSLIT*KKHR*AAEEDGDQQAGAESARACPQHGEDN 408
           G  ++G      Q  +  G+QR + S                 ++G+ S+R+    G   
Sbjct: 14  GSSRSGSRSVTPQGGSAPGSQRSRRS----------GSGSDRSRSGSRSSRSRSGSGSPR 63

Query: 409 *TNYWNAKAIH*H--GSARN*STANQHVRHVGSGC*LHKGTPDADQDH 546
                +A++ H    GSAR+  + + H R  GS      GTP++ Q H
Sbjct: 64  SARSGSAESRHSQLSGSARSKRSRSAHSRRSGSARSRKSGTPESPQSH 111

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>POL_MLVFF (P26809) Pol polyprotein [Contains: Protease (EC 3.4.23.-); Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 1204

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 29/111 (26%), Positives = 54/111 (48%)
 Frame = +2

Query: 122 PCQLPLCLDRKNVADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKK 301
           P  +PL      V+ KQ   +   E +  + P+I++   + + +   S     L+P VKK
Sbjct: 172 PLIIPLKATSTPVSIKQYPMSQ--EARLGIKPHIQRLLDQGILVPCQSPWNTPLLP-VKK 228

Query: 302 DRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDL 454
             ++  R + +LR   E++KRV ++   VPN   ++     + + YT +DL
Sbjct: 229 PGTNDYRPVQDLR---EVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDL 276

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>POL_MLVRD (P11227) Pol polyprotein [Contains: Protease (EC 3.4.23.-); Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 1196

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 30/111 (27%), Positives = 53/111 (47%)
 Frame = +2

Query: 122 PCQLPLCLDRKNVADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKK 301
           P  +PL      V+ KQ   +   E K  + P+I++   + + +   S     L+P VKK
Sbjct: 167 PLIIPLKATSTPVSIKQYPMSQ--EAKLGIKPHIQRLLDQGILVPCQSPWNTPLLP-VKK 223

Query: 302 DRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDL 454
             ++  R +  LR   E++KRV ++   VPN   ++     + + YT +DL
Sbjct: 224 PGTNDYRPVQGLR---EVNKRVEDIHPTVPNPYNLLSGLPTSHRWYTVLDL 271

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>POL_MLVMO (P03355) Pol polyprotein [Contains: Protease (EC 3.4.23.-); Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 1199

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 29/111 (26%), Positives = 54/111 (48%)
 Frame = +2

Query: 122 PCQLPLCLDRKNVADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKK 301
           P  +PL      V+ KQ   +   E +  + P+I++   + + +   S     L+P VKK
Sbjct: 167 PLIIPLKATSTPVSIKQYPMSQ--EARLGIKPHIQRLLDQGILVPCQSPWNTPLLP-VKK 223

Query: 302 DRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDL 454
             ++  R + +LR   E++KRV ++   VPN   ++     + + YT +DL
Sbjct: 224 PGTNDYRPVQDLR---EVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDL 271

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>APLP_DROME (Q9V496) Apolipophorins precursor (Retinoid- and fatty acid-binding|
           glycoprotein) [Contains: Apolipophorin-2 (Apolipophorin
           II) (ApoL2); Apolipophorin-1 (Apolipophorin I) (ApoL1)]
          Length = 3351

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
 Frame = +2

Query: 242 QVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELV---------PN 394
           Q    + S  +  L+ NV+   +   + I   +R ++IS +V  + +L          P 
Sbjct: 220 QANYIKESRIVNHLIENVQLTETY--KFIGNTKRNSDISAKVVTILKLKNPSGTKANSPG 277

Query: 395 MEKIIKQTI-GTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKE 523
               ++  I   P+ YT  +   IN L T +SD++D   DY+K+
Sbjct: 278 TGSTVRSLIFQRPETYTSKN---INALKTILSDLVDSTGDYVKK 318

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>ALM1_SCHPO (Q9UTK5) Abnormal long morphology protein 1 (Sp8)|
          Length = 1727

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 26/139 (18%), Positives = 60/139 (43%)
 Frame = +2

Query: 185  DIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKR 364
            +IG  K EL     K    +   A+N S+I++L     K  ++ R    ++  ++ + K 
Sbjct: 1339 EIGHLKSELETVKSKSEDLENERAQNQSKIEQLELKNTKLAAAWRTKYEQVVNKS-LEKH 1397

Query: 365  VRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQIKT 544
             +  Q+L     ++  +     +    ++ P   P  T  S+   ++++     + ++ +
Sbjct: 1398 NQIRQQLSQKTSELEAKVAECHQLNEQLNKPSATPTATTQSEPSTVSLEEFNSTKEELSS 1457

Query: 545  TDLVMALSLVDSLKVMKEE 601
            T   ++  ++D L   KEE
Sbjct: 1458 TQRKLS-EIMDILNTTKEE 1475

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>SNUT3_HUMAN (Q8WVK2) U4/U6.U5 tri-snRNP-associated protein 3 (U4/U6.U5|
           tri-snRNP-associated 27 kDa protein) (27K) (Nucleic
           acid-binding protein RY-1)
          Length = 155

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 23/86 (26%), Positives = 32/86 (37%)
 Frame = +2

Query: 248 RMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGT 427
           R     SR +E      + RS HRR     RR    S     L+E     +K  K+T   
Sbjct: 25  RRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSK 84

Query: 428 PKPYTDMDLPGINPLPTNMSDMLDLA 505
            +  T+ DL G       M  ++  A
Sbjct: 85  ERQITEEDLEGKTEEEIEMMKLMGFA 110

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>SYFA_PROMT (Q46JK1) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 335

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
 Frame = +2

Query: 221 IEKDHAKQVRMAENSSRIQEL-------------VPNVKKDRSSHRRSIAELRR---RTE 352
           +E + AK++  AENS  I++L             +    K+ S+  R +   R    +T+
Sbjct: 17  LESEAAKEIASAENSESIEKLRLSFLGKKGKLSLLLGGMKNLSNEERPLIGQRANVLKTQ 76

Query: 353 ISKRVRNLQELVPNM---EKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDL 502
           + + ++   E++      + +IK+TI    P T +     +PL T    ++DL
Sbjct: 77  LQELIKEKLEILKTQALSQILIKETIDVTAPPTGITQGHRHPLITTTEQIIDL 129

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>NUAK1_HUMAN (O60285) NUAK family, SNF1-like kinase 1 (EC 2.7.11.1)|
           (AMPK-related protein kinase 5)
          Length = 661

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
 Frame = +2

Query: 47  AAAPIPGQSPRIFGRAAQIRPRQIRPCQLPLCLDRKNVADKQVRWTDIGEKKQELVPNIE 226
           AAAP+ G  P + G  A   PR+           RK    K+       + + EL   + 
Sbjct: 4   AAAPVAGDRPDL-GLGAPGSPREAVAGATAALEPRKPHGVKRHHHKHNLKHRYELQETLG 62

Query: 227 KD-HAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISK-----RVRNLQELV 388
           K  + K  R  E  S     + +++KD+    + +  +RR  EI        + ++ E+ 
Sbjct: 63  KGTYGKVKRATERFSGRVVAIKSIRKDKIKDEQDMVHIRREIEIMSSLNHPHIISIYEVF 122

Query: 389 PNMEKII 409
            N +KI+
Sbjct: 123 ENKDKIV 129

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>NU4M_PANTR (P03906) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 21/93 (22%), Positives = 45/93 (48%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + LI+  +    +  F    L  +++ SS  L
Sbjct: 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLMLSLWGMIMTSSICL 277

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSFS 223
              D +S     + S + L+ +AIL    WSF+
Sbjct: 278 RQTDLKSLIAYPSVSHMALVVTAILIQTPWSFT 310

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>NU4M_BOVIN (P03910) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 21/92 (22%), Positives = 43/92 (46%)
 Frame = -2

Query: 501 RSNMSDMLVGSGLIPGRSMSVYGFGVPIVCLIIFSMLGTSSCRFRTRLLISVLLRSSAML 322
           ++++   + GS ++    + + G+G+  + LI+  M    +  F    L  +++ SS  L
Sbjct: 218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICL 277

Query: 321 LLCDERSFFTLGTSSCIRLLFSAILTCLAWSF 226
              D +S     + S + L+  AIL    WS+
Sbjct: 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSY 309

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>CWC23_SCHPO (Q9P7C6) Pre-mRNA-splicing factor cwc23 (Complexed with cdc5|
           protein 23) (Cell cycle control protein cwf23)
          Length = 289

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/79 (22%), Positives = 38/79 (48%)
 Frame = +2

Query: 149 RKNVADKQVRWTDIGEKKQELVPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSI 328
           RK++ D      D+ E++++   ++EK   ++ R+ E    +QE   N+++ R +  R  
Sbjct: 91  RKSMVD------DLRERERQFYDSLEKKENERDRLQEKLRALQEESANLRRQRENRLREE 144

Query: 329 AELRRRTEISKRVRNLQEL 385
            E  +R +       + EL
Sbjct: 145 QEQSKRRKQETPSSKISEL 163

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>MITF_MOUSE (Q08874) Microphthalmia-associated transcription factor|
          Length = 526

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 25/108 (23%), Positives = 46/108 (42%)
 Frame = +2

Query: 212 VPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVP 391
           +PNI+++    +   E+ +R        K+ +     ++ E RRR  I+ R++ L  L+P
Sbjct: 285 LPNIKRELTACIFPTESEARAL-----AKERQKKDNHNLIERRRRFNINDRIKELGTLIP 339

Query: 392 NMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQ 535
                            D D      +  N   +L  +VDYI++LQ +
Sbjct: 340 KS--------------NDPD------MRWNKGTILKASVDYIRKLQRE 367

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>MITF_HUMAN (O75030) Microphthalmia-associated transcription factor|
          Length = 526

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 25/108 (23%), Positives = 46/108 (42%)
 Frame = +2

Query: 212 VPNIEKDHAKQVRMAENSSRIQELVPNVKKDRSSHRRSIAELRRRTEISKRVRNLQELVP 391
           +PNI+++    +   E+ +R        K+ +     ++ E RRR  I+ R++ L  L+P
Sbjct: 285 LPNIKRELTACIFPTESEARAL-----AKERQKKDNHNLIERRRRFNINDRIKELGTLIP 339

Query: 392 NMEKIIKQTIGTPKPYTDMDLPGINPLPTNMSDMLDLAVDYIKELQMQ 535
                            D D      +  N   +L  +VDYI++LQ +
Sbjct: 340 KS--------------NDPD------MRWNKGTILKASVDYIRKLQRE 367


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,459,893
Number of Sequences: 219361
Number of extensions: 1997338
Number of successful extensions: 7423
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 7050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7414
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result