ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63o22 |
|---|---|
| Clone Library Name | barley_pub |
>ICE1_ARATH (Q9LSE2) Transcription factor ICE1 (Inducer of CBF expression 1)| (Basic helix-loop-helix protein 116) (bHLH116) (AtbHLH116) Length = 494 Score = 65.1 bits (157), Expect = 1e-10 Identities = 30/59 (50%), Positives = 44/59 (74%) Frame = +1 Query: 4 KNILMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSA 180 KN++ ER RR+KLN++LY LRSVVP I+KMD+ASI+ DAI+Y++ L + E+ + Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 365
>RAP1_ARATH (Q39204) Transcription factor AtMYC2 (R-homologous Arabidopsis| protein 1) (RAP-1) (Basic helix-loop-helix protein 6) (bHLH6) (AtbHLH006) (rd22BP1) Length = 623 Score = 62.0 bits (149), Expect = 1e-09 Identities = 28/51 (54%), Positives = 40/51 (78%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAE 171 ER RR KLN++ Y LR+VVPN++KMDKAS++ DAI YI L+++ + E+E Sbjct: 457 ERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
>EGL1_ARATH (Q9CAD0) Transcription factor EGL1 (ENHANCER OF GLABRA3) (Basic| helix-loop-helix protein 2) (bHLH2) (AtbHLH002) (AtMyc-146) Length = 596 Score = 61.6 bits (148), Expect = 1e-09 Identities = 27/52 (51%), Positives = 40/52 (76%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEA 168 L E+ RR KLNE+ TLRS++P+I+K+DK SI+ D IEY+Q LQ +++E+ Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>TT8_ARATH (Q9FT81) TRANSPARENT TESTA 8 protein (Basic helix-loop-helix| protein 42) (bHLH42) (AtbHLH042) Length = 518 Score = 61.6 bits (148), Expect = 1e-09 Identities = 28/53 (52%), Positives = 38/53 (71%) Frame = +1 Query: 7 NILMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQME 165 +++ ER RR KLNEK TLRS+VP +TKMDK SI+ D I Y+ HL+ ++E Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>PIF3_ARATH (O80536) Phytochrome-interacting factor 3 (Phytochrome-associated| protein 3) (Basic helix-loop-helix protein 8) (bHLH8) (AtbHLH008) Length = 524 Score = 51.6 bits (122), Expect = 1e-06 Identities = 23/50 (46%), Positives = 37/50 (74%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQM 162 L ER RR ++NEK+ L+ ++PN K+DKAS++ +AIEY++ LQ + + M Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>SPT_ARATH (Q9FUA4) Protein SPATULA| Length = 373 Score = 51.6 bits (122), Expect = 1e-06 Identities = 22/50 (44%), Positives = 37/50 (74%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQM 162 L E+ RR ++NEK+ L+S++PN K DKAS++ +AIEY++ LQ + + + Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>ARRS_MAIZE (P13027) Anthocyanin regulatory R-S protein| Length = 612 Score = 50.1 bits (118), Expect = 4e-06 Identities = 21/54 (38%), Positives = 39/54 (72%) Frame = +1 Query: 7 NILMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEA 168 +++ ER RR KLNE L+S++P+I +++KASI+ + I Y++ LQ +++E+ Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 472
>ARLC_MAIZE (P13526) Anthocyanin regulatory Lc protein| Length = 610 Score = 50.1 bits (118), Expect = 4e-06 Identities = 21/54 (38%), Positives = 39/54 (72%) Frame = +1 Query: 7 NILMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEA 168 +++ ER RR KLNE L+S++P+I +++KASI+ + I Y++ LQ +++E+ Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 470
>MYCN_MARMO (Q61976) N-myc proto-oncogene protein (N-myc1)| Length = 460 Score = 49.3 bits (116), Expect = 6e-06 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 N NIL ER RR L TLR VP + K +KA+ I+K A EY+ LQAEE Q+ E Sbjct: 381 NHNIL-ERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEHQLLLE 439 Query: 172 VSALES 189 L++ Sbjct: 440 KEKLQA 445
>MYCN_HUMAN (P04198) N-myc proto-oncogene protein| Length = 464 Score = 49.3 bits (116), Expect = 6e-06 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 N NIL ER RR L TLR VP + K +KA+ I+K A EY+ LQAEE Q+ E Sbjct: 385 NHNIL-ERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEHQLLLE 443 Query: 172 VSALES 189 L++ Sbjct: 444 KEKLQA 449
>MYC2_SPEBE (Q64210) N-myc 2 proto-oncogene protein| Length = 454 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 N NIL ER RR L TLR VP + K +KA+ I+K A EY+ +LQA+E Q+ E Sbjct: 375 NHNIL-ERQRRNDLRSSFTTLRDHVPELVKNEKAAKVVILKKACEYVHYLQAKEHQLLME 433 Query: 172 VSALES 189 L++ Sbjct: 434 KEKLQA 439
>MYC2_MARMO (P20389) N-myc 2 proto-oncogene protein| Length = 454 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 N NIL ER RR L TLR VP + K +KA+ I+K A EY+ +LQA+E Q+ E Sbjct: 375 NHNIL-ERQRRNDLRSSFTTLRDHVPELVKNEKAAKVVILKKACEYVHYLQAKEHQLLME 433 Query: 172 VSALES 189 L++ Sbjct: 434 KEKLQA 439
>MYCN_CHICK (P18444) N-myc proto-oncogene protein| Length = 441 Score = 48.1 bits (113), Expect = 1e-05 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 N NIL ER RR L TLR VP + K +KA+ I+K A EY+ LQAEE+++ E Sbjct: 362 NHNIL-ERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEQKLLLE 420 Query: 172 VSALES 189 L++ Sbjct: 421 KEKLQA 426
>PIF4_ARATH (Q8W2F3) Phytochrome-interacting factor 4 (Basic helix-loop-helix| protein 9) (bHLH9) (AtbHLH009) (Short under red-light 2) Length = 430 Score = 48.1 bits (113), Expect = 1e-05 Identities = 21/50 (42%), Positives = 37/50 (74%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQM 162 L ER RR ++NE++ L+ ++P+ +K DKASI+ +AI+Y++ LQ + + M Sbjct: 264 LSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>MYCN_RAT (Q63379) N-myc proto-oncogene protein| Length = 462 Score = 47.0 bits (110), Expect = 3e-05 Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 N NIL ER RR L TLR VP + K +KA+ I+K A EY+ LQA E Q+ E Sbjct: 383 NHNIL-ERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHALQANEHQLLLE 441 Query: 172 VSALES 189 L++ Sbjct: 442 KEKLQA 447
>MYCN_MOUSE (P03966) N-myc proto-oncogene protein| Length = 462 Score = 47.0 bits (110), Expect = 3e-05 Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 N NIL ER RR L TLR VP + K +KA+ I+K A EY+ LQA E Q+ E Sbjct: 383 NHNIL-ERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHALQANEHQLLLE 441 Query: 172 VSALES 189 L++ Sbjct: 442 KEKLQA 447
>LAX_ORYSA (Q7XAQ6) Transcription factor LAX PANICLE| Length = 215 Score = 45.4 bits (106), Expect = 9e-05 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 12/73 (16%) Frame = +1 Query: 22 RDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQA------------EERQME 165 R+RR +++++ LRS+VP +KMD S+++ AI Y++ L+A EE Sbjct: 50 RERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAALVQHEEGCQH 109 Query: 166 AEVSALESATGAD 204 A+V+A SA AD Sbjct: 110 ADVAAAFSAADAD 122
>MYCN_XENLA (P24793) N-myc protein| Length = 437 Score = 44.3 bits (103), Expect = 2e-04 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 N NIL ER RR L TLR VP + K +KA+ I+K A EY+ L A+E+++ E Sbjct: 358 NHNIL-ERQRRNDLRSSFLTLRDHVPELIKNEKAAKVVILKKATEYVHSLHADEQKLLLE 416 Query: 172 VSALE 186 L+ Sbjct: 417 KEKLQ 421
>BIM2_ARATH (Q9CAA4) Putative transcription factor BIM2 (BES1-interacting| Myc-like protein 2) (Transcription factor EN 125) (AtbHLH 102) Length = 311 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNI-TKMDKASIIKDAIEYIQHLQAEERQME 165 +K+ + E+ RR K+NE+ LR ++PN K D AS + + I+Y+Q+LQ + ++ E Sbjct: 48 SKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYE 103
>BIM1_ARATH (Q9LEZ3) Transcription factor BIM1 (BES1-interacting Myc-like| protein 1) (Transcription factor EN 126) (AtbHLH 46) Length = 530 Score = 43.1 bits (100), Expect = 5e-04 Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNIT-KMDKASIIKDAIEYIQHLQ 144 +K+ E+ RR K+N++ LR ++PN K DKAS + + IEYIQ LQ Sbjct: 279 SKHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQ 327
>SUM1_LYTVA (Q00492) Transcription factor SUM-1 (Sea urchin myogenic factor 1)| Length = 260 Score = 40.8 bits (94), Expect = 0.002 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVV---PNITKMDKASIIKDAIEYIQH----LQAEERQMEAE 171 L ER R RK+NE L+ PN ++ K I+++AIEYI+ LQ E+ ++E Sbjct: 119 LRERRRLRKVNEAFEALKRHTCANPN-QRLPKVEILRNAIEYIEKLERLLQVEKANGDSE 177 Query: 172 VSALESATGADDDCDGGLSVEQVSSAQRKKVKRALSVSS 288 + + E+++ D G S SS + ++ VSS Sbjct: 178 MDSAETSSNTSDAMTDGSSPGSYSSDKAQQYGDGYDVSS 216
>IND_ARATH (O81313) INDEHISCENT protein| Length = 169 Score = 40.8 bits (94), Expect = 0.002 Identities = 18/51 (35%), Positives = 34/51 (66%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQME 165 ++ R RR +++EK+ L+ +VP KMD AS++ +AI Y + L+ + R ++ Sbjct: 96 VVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 146
>BIM3_ARATH (Q9FMB6) Putative transcription factor BIM3 (BES1-interacting| Myc-like protein 3) (Transcription factor EN 127) (AtbHLH 141) Length = 298 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVP---NITKMDKASIIKDAIEYIQHLQAEERQME 165 +K+ E+ RR K+NE+ +L ++P N K DKAS + + IEYI LQ + E Sbjct: 36 SKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYE 93
>HFR1_ARATH (Q9FE22) Long hypocotyl in far-red 1 (bHLH-like protein HFR1)| (Reduced phytochrome signaling) (Basic helix-loop-helix FBI1 protein) (Basic helix-loop-helix protein 26) (bHLH26) (AtbHLH026) (Reduced sensitivity to far-red light) Length = 292 Score = 40.0 bits (92), Expect = 0.004 Identities = 18/47 (38%), Positives = 30/47 (63%) Frame = +1 Query: 22 RDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQM 162 R R K++ K+ L+ +VPN K DK S++ IEY+++LQ + + M Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMM 190
>MYOD1_COTJA (P21572) Myoblast determination protein 1 homolog (Myogenic factor| 1) Length = 297 Score = 39.7 bits (91), Expect = 0.005 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 13/108 (12%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQAEERQME-AEVSA 180 + ER R K+NE TL+ S PN ++ K I+++AI YI+ LQA R+ E A Sbjct: 108 MRERRRLSKVNEAFETLKRCTSTNPN-QRLPKVEILRNAIRYIESLQALLREQEDAYYPV 166 Query: 181 LESATGADD------DCDGGL---SVEQVSSAQRKKVKRALSVSSMND 297 LE +G D +C G+ S SS +R + S ND Sbjct: 167 LEHYSGESDASSPRSNCSDGMMEYSGPPCSSRRRNSYDSSYYTESPND 214
>MYOD1_CHICK (P16075) Myoblast determination protein 1 homolog (MYOD1 homolog)| Length = 298 Score = 39.7 bits (91), Expect = 0.005 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 13/108 (12%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQAEERQME-AEVSA 180 + ER R K+NE TL+ S PN ++ K I+++AI YI+ LQA R+ E A Sbjct: 107 MRERRRLSKVNEAFETLKRCTSTNPN-QRLPKVEILRNAIRYIESLQALLREQEDAYYPV 165 Query: 181 LESATGADD------DCDGGL---SVEQVSSAQRKKVKRALSVSSMND 297 LE +G D +C G+ S SS +R + S ND Sbjct: 166 LEHYSGESDASSPRSNCSDGMMEYSGPPCSSRRRNSYDSSYYTESPND 213
>MYCS_MOUSE (Q9Z304) Protein S-myc| Length = 431 Score = 39.3 bits (90), Expect = 0.007 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 MER RR + LR +VP + +KA+ I+K A EYI LQA+E ++ E Sbjct: 356 MERQRRDIMRSSFLNLRDLVPELVHNEKAAKVVILKKATEYIHTLQADESKLLVE 410
>MYCN_SERCA (P26014) N-myc proto-oncogene protein| Length = 427 Score = 38.1 bits (87), Expect = 0.015 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRS-VVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEA 168 N NIL ER R L TLR V+ + + +KA+ I+K A EY+ LQAEE+++ Sbjct: 347 NHNIL-ERQRANDLRSSFLTLRDHVLSELVQNEKAAKVVILKKATEYVHSLQAEEQKLLL 405 Query: 169 EVSALES 189 E L++ Sbjct: 406 EKEKLQA 412
>MYCS_RAT (P23999) Protein S-myc| Length = 429 Score = 37.7 bits (86), Expect = 0.019 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAE 171 MER RR + LR +VP + +KA+ I+K A EYI LQ +E ++ E Sbjct: 354 MERQRRDIMRSSFLNLRDLVPELVHNEKAAKVVILKKATEYIHTLQTDESKLLVE 408
>MYCLB_XENLA (P35805) L-myc B protein (L-myc 2 protein)| Length = 344 Score = 36.6 bits (83), Expect = 0.043 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYIQHLQAEERQMEAE 171 +ER RR L + LR VP++ TK K ++ A E+++ L +E+Q+ AE Sbjct: 269 LERKRRNDLRSRFLALREEVPSLSRSTKTPKVVVLSKATEFLKGLVIQEQQLTAE 323
>MYCLA_XENLA (Q05404) L-myc A protein (L-myc 1 protein)| Length = 344 Score = 36.6 bits (83), Expect = 0.043 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYIQHLQAEERQMEAE 171 +ER RR L + LR VP++ TK K ++ A E+++ L +E+Q+ AE Sbjct: 269 LERKRRNDLRSRFLALREEVPSLTRSTKTPKVVVLSKATEFLKGLVIQEQQLTAE 323
>TYE7_YEAST (P33122) Serine-rich protein TYE7 (Basic-helix-loop-helix protein| SGC1) Length = 291 Score = 36.2 bits (82), Expect = 0.056 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = +1 Query: 61 LRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSALES 189 L S TK++K+ I++ A++YI +LQ ER E EV L+S Sbjct: 239 LPSAAATSTKLNKSMILEKAVDYILYLQNNERLYEMEVQRLKS 281
>MAX_RAT (P52164) Protein max (Myc-associated factor X)| Length = 160 Score = 35.8 bits (81), Expect = 0.073 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYIQHLQAEERQMEAEVSALE 186 +ER RR + + ++LR VP++ K +A I+ A EYIQ+++ + + ++ L+ Sbjct: 31 LERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLK 89
>MAX_HUMAN (P61244) Protein max (Myc-associated factor X)| Length = 160 Score = 35.8 bits (81), Expect = 0.073 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYIQHLQAEERQMEAEVSALE 186 +ER RR + + ++LR VP++ K +A I+ A EYIQ+++ + + ++ L+ Sbjct: 31 LERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLK 89
>MAX_FELCA (P61245) Protein max (Myc-associated factor X)| Length = 160 Score = 35.8 bits (81), Expect = 0.073 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYIQHLQAEERQMEAEVSALE 186 +ER RR + + ++LR VP++ K +A I+ A EYIQ+++ + + ++ L+ Sbjct: 31 LERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLK 89
>MAX_CHICK (P52162) Protein max (Myc-associated factor X)| Length = 160 Score = 35.8 bits (81), Expect = 0.073 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYIQHLQAEERQMEAEVSALE 186 +ER RR + + ++LR VP++ K +A I+ A EYIQ+++ + + ++ L+ Sbjct: 31 LERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLK 89
>MYOD1_SHEEP (P29331) Myoblast determination protein 1| Length = 319 Score = 35.4 bits (80), Expect = 0.096 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 3/98 (3%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSAL 183 + ER R K+NE TL+ S PN ++ K I+++AI YI+ LQA R +A Sbjct: 116 MRERRRLSKVNEAFETLKRCTSSNPN-QRLPKVEILRNAIRYIEGLQALLRDQDAAPPGA 174 Query: 184 ESATGADDDCDGGLSVEQVSSAQRKKVKRALSVSSMND 297 +A A G S E S R+ M D Sbjct: 175 AAAFYAPGPLPPGRSGEHYSGDSDASSPRSNCSDGMMD 212
>MYODA_XENLA (P13904) Myoblast determination protein 1 homolog A (Myogenic| factor 1) Length = 289 Score = 35.0 bits (79), Expect = 0.12 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQA-EERQMEAEVSA 180 + ER R K+NE TL+ S PN ++ K I+++AI YI+ LQA Q EA Sbjct: 102 MRERRRLSKVNEAFETLKRYTSTNPN-QRLPKVEILRNAIRYIESLQALLHDQDEAFYPV 160 Query: 181 LESATGADD 207 LE +G D Sbjct: 161 LEHYSGDSD 169
>MAX_MOUSE (P28574) Protein max (Myc-associated factor X) (Protein myn)| (Myc-binding novel HLH/LZ protein) Length = 160 Score = 35.0 bits (79), Expect = 0.12 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYIQHLQAEERQMEAEVSALE 186 +ER RR + + ++LR VP++ K +A I+ A EYIQ+++ + + ++ L+ Sbjct: 31 LERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNDTHQQDIDDLK 89
>MLX_MOUSE (O08609) Max-like protein X (Max-like bHLHZip protein) (BigMax| protein) (Protein Mlx) (Transcription factor-like protein 4) Length = 298 Score = 34.7 bits (78), Expect = 0.16 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 9/64 (14%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNITKMD---------KASIIKDAIEYIQHLQAEERQMEAE 171 E+ RR + L+++VP + D KA +++ I+YIQ L E+++ E E Sbjct: 138 EQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEE 197 Query: 172 VSAL 183 VS L Sbjct: 198 VSTL 201
>MLX_HUMAN (Q9UH92) Max-like protein X (Max-like bHLHZip protein) (BigMax| protein) (Protein Mlx) (Transcription factor-like protein 4) Length = 298 Score = 34.7 bits (78), Expect = 0.16 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 9/64 (14%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNITKMD---------KASIIKDAIEYIQHLQAEERQMEAE 171 E+ RR + L+++VP + D KA +++ I+YIQ L E+++ E E Sbjct: 138 EQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEE 197 Query: 172 VSAL 183 VS L Sbjct: 198 VSTL 201
>MAX_XENLA (Q07016) Protein max (Myc-associated factor X) (xMAX)| Length = 163 Score = 34.7 bits (78), Expect = 0.16 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYIQHLQAEERQMEAEVSALE 186 +ER RR + + + LR VP++ K +A I+ A EYIQ+++ + + ++ L+ Sbjct: 31 LERKRRDHIKDSFHGLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLK 89
>HES1_CHICK (O57337) Transcription factor HES-1 (C-HAIRY1)| Length = 290 Score = 33.9 bits (76), Expect = 0.28 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 8/70 (11%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNI--------TKMDKASIIKDAIEYIQHLQAEERQMEA 168 +ME+ RR ++NE L L+ ++ + +K++KA I++ ++++++LQ QM A Sbjct: 42 IMEKRRRARINESLGQLKMLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ--RAQMAA 99 Query: 169 EVSALESATG 198 +SA S G Sbjct: 100 ALSADPSVLG 109
>MYOD1_PIG (P49811) Myoblast determination protein 1| Length = 319 Score = 33.9 bits (76), Expect = 0.28 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSAL 183 + ER R K+NE TL+ S PN ++ K I+++AI YI+ LQA R +A Sbjct: 116 MRERRRLSKVNEAFETLKRCTSSNPN-QRLPKVEILRNAIRYIEGLQALLRDQDAAPPGA 174 Query: 184 ESATGADDDCDGGLSVEQVSSAQRKKVKRALSVSSMND 297 +A A G E S R+ M D Sbjct: 175 AAAFYAPGPLPPGRGGEHYSGDSDASSPRSNCSDGMMD 212
>ASCL1_XENLA (Q06234) Achaete-scute homolog 1| Length = 199 Score = 33.9 bits (76), Expect = 0.28 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNIT---KMDKASIIKDAIEYIQHLQAEERQMEAEVSALES 189 ER+R + +N TLR VPN KM K ++ A+EYI+ LQ + +A +A +S Sbjct: 90 ERNRVKLVNLGFATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDAVSAAFQS 149
>USF1_RABIT (O02818) Upstream stimulatory factor 1 (Major late transcription| factor 1) Length = 310 Score = 33.5 bits (75), Expect = 0.36 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNITK------MDKASIIKDAIEYIQHLQAEERQMEAEVS 177 +ER RR K+N + L ++P+ + K I+ A +YIQ L+ ++ E+ Sbjct: 207 VERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQ 266 Query: 178 ALE 186 L+ Sbjct: 267 GLD 269
>USF1_MOUSE (Q61069) Upstream stimulatory factor 1 (Major late transcription| factor 1) Length = 310 Score = 33.5 bits (75), Expect = 0.36 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNITK------MDKASIIKDAIEYIQHLQAEERQMEAEVS 177 +ER RR K+N + L ++P+ + K I+ A +YIQ L+ ++ E+ Sbjct: 207 VERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQ 266 Query: 178 ALE 186 L+ Sbjct: 267 GLD 269
>USF1_HUMAN (P22415) Upstream stimulatory factor 1 (Major late transcription| factor 1) Length = 310 Score = 33.5 bits (75), Expect = 0.36 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNITK------MDKASIIKDAIEYIQHLQAEERQMEAEVS 177 +ER RR K+N + L ++P+ + K I+ A +YIQ L+ ++ E+ Sbjct: 207 VERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQ 266 Query: 178 ALE 186 L+ Sbjct: 267 GLD 269
>MYOD1_RAT (Q02346) Myoblast determination protein 1| Length = 318 Score = 33.5 bits (75), Expect = 0.36 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQAEERQMEA 168 + ER R K+NE TL+ S PN ++ K I+++AI YI+ LQA R +A Sbjct: 116 MRERRRLSKVNEAFETLKRCTSSNPN-QRLPKVEILRNAIRYIEGLQALLRDQDA 169
>MYOD1_MOUSE (P10085) Myoblast determination protein 1| Length = 318 Score = 33.5 bits (75), Expect = 0.36 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQAEERQMEA 168 + ER R K+NE TL+ S PN ++ K I+++AI YI+ LQA R +A Sbjct: 116 MRERRRLSKVNEAFETLKRCTSSNPN-QRLPKVEILRNAIRYIEGLQALLRDQDA 169
>MYOD1_BRARE (Q90477) Myoblast determination protein 1 homolog (Myogenic factor| 1) Length = 275 Score = 33.5 bits (75), Expect = 0.36 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSAL 183 + ER R K+N+ TL+ S PN ++ K I+++AI YI+ LQA R E + Sbjct: 91 MRERRRLSKVNDAFETLKRCTSTNPN-QRLPKVEILRNAISYIESLQALLRSQEDNYYPV 149 Query: 184 ESATGADDD 210 D D Sbjct: 150 MEHYSGDSD 158
>HES1_RAT (Q04666) Transcription factor HES-1 (Hairy and enhancer of split 1)| (Hairy-like) (RHL) Length = 281 Score = 33.5 bits (75), Expect = 0.36 Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 8/70 (11%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNI--------TKMDKASIIKDAIEYIQHLQAEERQMEA 168 +ME+ RR ++NE L L++++ + +K++KA I++ ++++++LQ QM A Sbjct: 41 IMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ--RAQMTA 98 Query: 169 EVSALESATG 198 +S S G Sbjct: 99 ALSTDPSVLG 108
>HES1_HUMAN (Q14469) Transcription factor HES-1 (Hairy and enhancer of split 1)| (Hairy-like) (HHL) (Hairy homolog) Length = 280 Score = 33.5 bits (75), Expect = 0.36 Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 8/70 (11%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNI--------TKMDKASIIKDAIEYIQHLQAEERQMEA 168 +ME+ RR ++NE L L++++ + +K++KA I++ ++++++LQ QM A Sbjct: 41 IMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ--RAQMTA 98 Query: 169 EVSALESATG 198 +S S G Sbjct: 99 ALSTDPSVLG 108
>HES1_BOVIN (Q3ZBG4) Transcription factor HES-1 (Hairy and enhancer of split 1)| Length = 280 Score = 33.5 bits (75), Expect = 0.36 Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 8/70 (11%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNI--------TKMDKASIIKDAIEYIQHLQAEERQMEA 168 +ME+ RR ++NE L L++++ + +K++KA I++ ++++++LQ QM A Sbjct: 41 IMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ--RAQMTA 98 Query: 169 EVSALESATG 198 +S S G Sbjct: 99 ALSTDPSVLG 108
>MYOD1_HUMAN (P15172) Myoblast determination protein 1 (Myogenic factor 3)| (Myf-3) Length = 319 Score = 33.5 bits (75), Expect = 0.36 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQAEERQMEA 168 + ER R K+NE TL+ S PN ++ K I+++AI YI+ LQA R +A Sbjct: 116 MRERRRLSKVNEAFETLKRCTSSNPN-QRLPKVEILRNAIRYIEGLQALLRDQDA 169
>HES1_MOUSE (P35428) Transcription factor HES-1 (Hairy and enhancer of split 1)| Length = 282 Score = 33.5 bits (75), Expect = 0.36 Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 8/70 (11%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNI--------TKMDKASIIKDAIEYIQHLQAEERQMEA 168 +ME+ RR ++NE L L++++ + +K++KA I++ ++++++LQ QM A Sbjct: 41 IMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ--RAQMTA 98 Query: 169 EVSALESATG 198 +S S G Sbjct: 99 ALSTDPSVLG 108
>MYC_ASTVU (Q17103) Myc protein (c-myc) (Fragment)| Length = 407 Score = 33.1 bits (74), Expect = 0.47 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNITKMDKAS---IIKDAIEYIQHLQAEERQMEAEVS 177 ++ER RR L LR VP + D+A+ I+K A +Y+ L+ E + +++ Sbjct: 328 VLERQRREDLRTSFLLLRDEVPELGTCDRAAKVVILKKATDYVSSLRDREETLRMDMA 385
>USF1_XENBO (Q07957) Upstream stimulatory factor 1 (USF) (SPF1) (B1 factor)| Length = 307 Score = 33.1 bits (74), Expect = 0.47 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI------TKMDKASIIKDAIEYIQHLQAEERQMEAEVS 177 +ER RR K+N + L ++P+ T K I+ A +YIQ L+ ++ E+ Sbjct: 204 VERRRRDKINNWIVQLSKIIPDCSMESTKTGQSKGGILSKACDYIQELRQSNLRLSEELQ 263 Query: 178 ALE 186 L+ Sbjct: 264 NLD 266
>ASCL1_RAT (P19359) Achaete-scute homolog 1| Length = 233 Score = 32.7 bits (73), Expect = 0.62 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPN---ITKMDKASIIKDAIEYIQHLQAEERQMEAEVSALES 189 ER+R + +N TLR VPN KM K ++ A+EYI+ LQ + +A +A ++ Sbjct: 124 ERNRVKLVNLGFATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDAVSAAFQA 183
>HMS1_YEAST (Q12398) Probable transcription factor HMS1 (High-copy MEP| suppressor protein 1) Length = 434 Score = 32.7 bits (73), Expect = 0.62 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 26/87 (29%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNI--------------------------TKMDKASIIK 114 ++E+ R +N+K+ LR VP + TK++KASI+ Sbjct: 273 IIEKKYRSNINDKIEQLRRTVPTLRVAYKKCNDLPITSRDLADLDGLEPATKLNKASILT 332 Query: 115 DAIEYIQHLQAEERQMEAEVSALESAT 195 +IEYI HL+ + Q+ L + T Sbjct: 333 KSIEYICHLERKCLQLSLANQHLSNDT 359
>ASCL1_HUMAN (P50553) Achaete-scute homolog 1 (HASH1)| Length = 236 Score = 32.7 bits (73), Expect = 0.62 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPN---ITKMDKASIIKDAIEYIQHLQAEERQMEAEVSALES 189 ER+R + +N TLR VPN KM K ++ A+EYI+ LQ + +A +A ++ Sbjct: 127 ERNRVKLVNLGFATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDAVSAAFQA 186
>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog| Length = 534 Score = 32.3 bits (72), Expect = 0.81 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Frame = +1 Query: 4 KNILMERDRRRKLNEKLYTLRSVVPNIT---KMDKASIIKDAIEYIQHLQA----EERQM 162 K+ ++ + ++E +YTLR NIT KM S + I + +L A E+ M Sbjct: 313 KDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSNLTAGLDDEDGSM 372 Query: 163 EAE--VSALESATGADDDCDGGLSVEQVSSAQRKKVKRALSVSSMND 297 + + +S T A+ D DG + VEQ S R +V + D Sbjct: 373 KLRRMIYIFDSMTAAELDGDGKMFVEQPSRMVRIACGSGTTVREVED 419
>MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle| myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin heavy chain, type A) (Nonmuscle myosin heavy chain-A) (NMMHC-A) Length = 1959 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Frame = +1 Query: 94 DKASIIKDAIEYIQHLQAEERQMEAEVSALESATGADDDCDGGLSVEQVSS-AQRKKVKR 270 D + +++ E QHLQAE+++M+ + LE ++ L +E+V++ A+ KK++ Sbjct: 919 DLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEE 978 Query: 271 ALSV 282 + V Sbjct: 979 DVIV 982
>TWIST_BRABE (O96642) Twist-related protein (BBtwist)| Length = 196 Score = 31.6 bits (70), Expect = 1.4 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYIQHLQAEERQMEAEVSALESA 192 ER R + LNE +LR ++P + K+ K +K A YI L R + + S Sbjct: 104 ERQRTQSLNEAFSSLRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLRSDDTDTKMASSC 163 Query: 193 T 195 + Sbjct: 164 S 164
>MYH9_HUMAN (P35579) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle| myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin heavy chain, type A) (Nonmuscle myosin heavy chain-A) (NMMHC-A) Length = 1959 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/56 (26%), Positives = 31/56 (55%) Frame = +1 Query: 94 DKASIIKDAIEYIQHLQAEERQMEAEVSALESATGADDDCDGGLSVEQVSSAQRKK 261 D + +++ E QHLQAE+++M+ + LE ++ L +E+V++ + K Sbjct: 918 DLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLK 973
>BFSP1_RAT (Q02435) Filensin (Beaded filament structural protein 1) (Lens| fiber cell beaded-filament structural protein CP 94) (CP94) (Fragment) Length = 617 Score = 31.6 bits (70), Expect = 1.4 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +1 Query: 46 EKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSALESATGADDDC 213 EKL T R V ++D+ E + HLQA++ +++A+ +ALE A +C Sbjct: 203 EKLLTEREVAALRNQLDEGR------EAVTHLQAQKAELQAQTTALEQAIKHAHEC 252
>ASCL1_MOUSE (Q02067) Achaete-scute homolog 1 (Mash-1)| Length = 231 Score = 31.6 bits (70), Expect = 1.4 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPN---ITKMDKASIIKDAIEYIQHLQAEERQMEAEVSALES 189 ER+R + +N TLR VPN KM K ++ A++YI+ LQ + +A +A ++ Sbjct: 122 ERNRVKLVNLGFATLREHVPNGAANKKMSKVETLRSAVQYIRALQQLLDEHDAVSAAFQA 181
>ASCL2_MOUSE (O35885) Achaete-scute homolog 2 (Mash-2)| Length = 263 Score = 31.6 bits (70), Expect = 1.4 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 8/73 (10%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPN---ITKMDKASIIKDAIEYIQHLQ---AEERQMEAEVSA 180 ER+R + +N LR VP+ K+ K ++ A+EYI+ LQ AE + A ++ Sbjct: 127 ERNRVKLVNLGFQALRQHVPHGGANKKLSKVETLRSAVEYIRALQRLLAEHDAVRAALAG 186 Query: 181 --LESATGADDDC 213 L AT D+C Sbjct: 187 GLLTPATPPSDEC 199
>MYOG_RAT (P20428) Myogenin| Length = 287 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTL-RSVVPNIT-KMDKASIIKDAIEYIQHLQA 147 L E+ R +K+NE L RS + N ++ K I++ AI+YI+ LQA Sbjct: 88 LREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQA 134
>MYOG_PIG (P49812) Myogenin| Length = 224 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTL-RSVVPNIT-KMDKASIIKDAIEYIQHLQA 147 L E+ R +K+NE L RS + N ++ K I++ AI+YI+ LQA Sbjct: 88 LREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQA 134
>MYOG_MOUSE (P12979) Myogenin (MYOD1-related protein)| Length = 224 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTL-RSVVPNIT-KMDKASIIKDAIEYIQHLQA 147 L E+ R +K+NE L RS + N ++ K I++ AI+YI+ LQA Sbjct: 88 LREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQA 134
>MYOG_HUMAN (P15173) Myogenin (Myogenic factor 4) (Myf-4)| Length = 224 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTL-RSVVPNIT-KMDKASIIKDAIEYIQHLQA 147 L E+ R +K+NE L RS + N ++ K I++ AI+YI+ LQA Sbjct: 88 LREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQA 134
>MYOD_DROME (P22816) Myogenic-determination protein (Protein nautilus) (dMyd)| Length = 332 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 3/47 (6%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLR---SVVPNITKMDKASIIKDAIEYIQHLQ 144 + ER R RK+NE L+ S PN ++ K I+++AIEYI+ L+ Sbjct: 168 MRERRRLRKVNEAFEILKRRTSSNPN-QRLPKVEILRNAIEYIESLE 213
>FIGLA_MOUSE (O55208) Factor in the germline alpha (Transcription factor FIGa)| (FIGalpha) Length = 194 Score = 30.8 bits (68), Expect = 2.4 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYIQHLQAEERQMEAEVSALES 189 ER+R + LN L+++VP + K K I+K A EYIQ L EA+VS +S Sbjct: 68 ERERIKNLNRGFAKLKALVPFLPQSRKPSKVDILKGATEYIQILGCVLE--EAKVSEKQS 125
>TWST1_MACTO (Q7JGP2) Twist-related protein 1| Length = 201 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 116 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 166
>TWST1_HUMAN (Q15672) Twist-related protein 1 (H-twist)| Length = 202 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 117 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 167
>RAD50_YEAST (P12753) DNA repair protein RAD50 (EC 3.6.-.-) (153 kDa protein)| Length = 1312 Score = 30.8 bits (68), Expect = 2.4 Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 5/97 (5%) Frame = +1 Query: 22 RDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSALESATGA 201 RD++RK+N+ L LR + ++ +M+K +++ I + ++ E VS +ES+ Sbjct: 837 RDQQRKMNDSLRELRKTISDL-QMEKDEKVRENSRMINLI----KEKELTVSEIESSLTQ 891 Query: 202 DDDCDGGL-----SVEQVSSAQRKKVKRALSVSSMND 297 + D + ++ + S ++ R +S+ + D Sbjct: 892 KQNIDDSIRSKRENINDIDSRVKELEARIISLKNKKD 928
>ASCL2_RAT (P19360) Achaete-scute homolog 2| Length = 260 Score = 30.8 bits (68), Expect = 2.4 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPN---ITKMDKASIIKDAIEYIQHLQ---AEERQMEAEVSA 180 ER+R + +N LR VP+ K+ K ++ A+EYI+ LQ AE + A +S Sbjct: 127 ERNRVKLVNLGFQALRQHVPHGGANKKLSKVETLRSAVEYIRALQRLLAEHDAVRAALSG 186 Query: 181 --LESATGADDDC 213 L AT D C Sbjct: 187 GLLTPATRPSDVC 199
>TWST1_EULFU (Q8MIF3) Twist-related protein 1| Length = 198 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 113 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 163
>TWST1_PONPY (Q8MIB9) Twist-related protein 1| Length = 203 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 118 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 168
>CBF1_YEAST (P17106) Centromere-binding protein 1 (CBP-1) (Centromere-binding| factor 1) (Centromere promoter factor 1) Length = 351 Score = 30.8 bits (68), Expect = 2.4 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHL-QAEERQME 165 +ER RR +N + L ++P + + KA+I+ A EYIQ L + +E +E Sbjct: 230 VERRRRENINTAINVLSDLLP-VRESSKAAILACAAEYIQKLKETDEANIE 279
>TWST1_HYLCO (Q8MIE7) Twist-related protein 1| Length = 204 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 119 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 169
>TWIST_XENLA (P13903) Twist-related protein (T18) (X-twist)| Length = 166 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE +LR ++P + K+ K +K A YI Q LQ++E Sbjct: 81 ERQRTQSLNEAFSSLRKIIPTLPSDKLSKIQTLKLASRYIDFLCQVLQSDE 131
>TWST2_RAT (P97831) Twist-related protein 2| Length = 160 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 75 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 125
>TWST2_MOUSE (Q9D030) Twist-related protein 2 (Dermis expressed protein 1)| (Dermo-1) Length = 160 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 75 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 125
>TWST2_HUMAN (Q8WVJ9) Twist-related protein 2 (Dermis expressed protein 1)| (Dermo-1) Length = 160 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 75 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 125
>TWST1_MOUSE (P26687) Twist-related protein 1 (M-twist)| Length = 206 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 ER R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 121 ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 171
>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1904 Score = 30.8 bits (68), Expect = 2.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 396 VQQAARRHDQGVPRARGAPPQGHHRQHH 479 +Q+ RR D+G R + P HHR HH Sbjct: 11 LQRPPRRGDEGCEEDRDSRPHHHHRHHH 38
>USF2_RAT (Q63665) Upstream stimulatory factor 2 (Upstream transcription| factor 2) (Major late transcription factor 2) Length = 346 Score = 30.4 bits (67), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI------TKMDKASIIKDAIEYIQHLQAEERQME 165 +ER RR K+N + L ++P+ T K I+ A +YI+ L+ ++M+ Sbjct: 243 VERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTNQRMQ 298
>USF2_MOUSE (Q64705) Upstream stimulatory factor 2 (Upstream transcription| factor 2) (Major late transcription factor 2) Length = 346 Score = 30.4 bits (67), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI------TKMDKASIIKDAIEYIQHLQAEERQME 165 +ER RR K+N + L ++P+ T K I+ A +YI+ L+ ++M+ Sbjct: 243 VERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTNQRMQ 298
>USF2_HUMAN (Q15853) Upstream stimulatory factor 2 (Upstream transcription| factor 2) (FOS-interacting protein) (FIP) (Major late transcription factor 2) Length = 346 Score = 30.4 bits (67), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNI------TKMDKASIIKDAIEYIQHLQAEERQME 165 +ER RR K+N + L ++P+ T K I+ A +YI+ L+ ++M+ Sbjct: 243 VERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTNQRMQ 298
>TWST1_GORGO (Q8MI06) Twist-related protein 1| Length = 203 Score = 30.4 bits (67), Expect = 3.1 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYIQHL 141 ER R + LNE LR ++P + K+ K +K A YI L Sbjct: 118 ERQRTQSLNEPFAALRKIIPTLPSDKLSKIQTLKLAARYIDFL 160
>FIGLA_HUMAN (Q6QHK4) Factor in the germline alpha (Transcription factor FIGa)| (FIGalpha) Length = 219 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYIQHL 141 ER+R + LN L+++VP + K K I+K A EYIQ L Sbjct: 74 ERERIKNLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVL 117
>UVRB_SYNPX (Q7UA24) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 677 Score = 30.0 bits (66), Expect = 4.0 Identities = 17/74 (22%), Positives = 35/74 (47%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSALESA 192 + E +RRRK+ + +VP ++ I +E + L+ + + A ++A Sbjct: 563 ISETERRRKIQQTYNEKHGIVPTAAGKKASNSILSFLELSRKLKQDGPDADLVQVAGKAA 622 Query: 193 TGADDDCDGGLSVE 234 ++D D GL++E Sbjct: 623 QALEEDPDAGLALE 636
>NGN1_HUMAN (Q92886) Neurogenin 1 (Neurogenic differentiation factor 3)| (NeuroD3) (Neurogenic basic-helix-loop-helix protein) Length = 237 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYI 132 ER+R LN L LRSV+P+ TK+ K ++ A YI Sbjct: 101 ERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYI 141
>BHLH8_HUMAN (Q7RTS1) Class B basic helix-loop-helix protein 8 (bHLHB8) (Muscle,| intestine and stomach expression 1) (MIST-1) Length = 189 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYIQHLQA 147 ER R KLN LR V+P++ K+ K + A YI+ L A Sbjct: 84 ERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTA 129
>NGN1_RAT (P70595) Neurogenin 1 (Neurogenic differentiation factor 3)| (NeuroD3) (Neurogenic basic-helix-loop-helix protein) Length = 244 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYI 132 ER+R LN L LRSV+P+ TK+ K ++ A YI Sbjct: 102 ERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYI 142
>NGN1_MOUSE (P70660) Neurogenin 1 (Neurogenic differentiation factor 3)| (NeuroD3) (Neurogenic basic-helix-loop-helix protein) (Helix-loop-helix protein mATH-4C) (MATH4C) Length = 244 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYI 132 ER+R LN L LRSV+P+ TK+ K ++ A YI Sbjct: 102 ERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYI 142
>BHLH8_RAT (P70562) Class B basic helix-loop-helix protein 8 (bHLHB8) (Muscle,| intestine and stomach expression 1) (MIST-1) Length = 197 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYIQHLQA 147 ER R KLN LR V+P++ K+ K + A YI+ L A Sbjct: 81 ERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTA 126
>BHLH8_MOUSE (Q9QYC3) Class B basic helix-loop-helix protein 8 (bHLHB8) (Muscle,| intestine and stomach expression 1) (MIST-1) Length = 197 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYIQHLQA 147 ER R KLN LR V+P++ K+ K + A YI+ L A Sbjct: 81 ERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTA 126
>HES3_RAT (Q04667) Transcription factor HES-3 (Hairy and enhancer of split 3)| Length = 175 Score = 29.6 bits (65), Expect = 5.3 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 7/50 (14%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVP-------NITKMDKASIIKDAIEYIQHLQ 144 ME+ RR ++N L LRS++ K++KA I++ +++Y++ LQ Sbjct: 1 MEKKRRARINLSLEQLRSLLERHYSHQIRKRKLEKADILELSVKYVRSLQ 50
>SDCG8_HUMAN (Q86SQ7) Serologically defined colon cancer antigen 8 (Centrosomal| colon cancer autoantigen protein) (hCCCAP) (Antigen NY-CO-8) Length = 713 Score = 29.3 bits (64), Expect = 6.9 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +1 Query: 28 RRRKLNEKLYTLRSVVPNITKM----DKASIIKDAIEYIQHLQAEERQMEAEVSALES 189 RRRK++ LRS+ T M D I D +YI HL+AE + + E+S +++ Sbjct: 95 RRRKMSP----LRSLEHEETNMPTMHDLVHTINDQSQYIHHLEAEVKFCKEELSGMKN 148
>PYC_ASPNG (Q9HES8) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1192 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +1 Query: 415 AMTKVCRVLEELRLRVITANITSVSGCLMHTLFVE 519 A KV R L E R+R + NI ++ L H +FV+ Sbjct: 445 ARRKVVRALVEFRIRGVKTNIPFLTSLLSHPVFVD 479
>NIPBL_HUMAN (Q6KC79) Nipped-B-like protein (Delangin) (SCC2 homolog)| Length = 2804 Score = 29.3 bits (64), Expect = 6.9 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 5/49 (10%) Frame = +1 Query: 61 LRSVVPN--ITKMDKASIIKDAIEY---IQHLQAEERQMEAEVSALESA 192 LRS + N IT+ K SI+K +++ ++HL +E + E EVSA +A Sbjct: 2597 LRSDMANSKITEEVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVSASTNA 2645
>RTG1_YEAST (P32607) Retrograde regulation protein 1| Length = 177 Score = 29.3 bits (64), Expect = 6.9 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 37/100 (37%) Frame = +1 Query: 7 NILMERDRRRKLNEKLYTLRSVVP-------------NIT-------------------- 87 N +R RR K+N+++ L S++P N T Sbjct: 16 NFKNDRKRRDKINDRIQELLSIIPKDFFRDYYGNSGSNDTLSESTPGALGLSSKAKGTGT 75 Query: 88 ---KMDKASIIKDAIEYIQHLQAE-ERQMEAEVSALESAT 195 K +K I+ A+EYI HLQ + + Q EV + AT Sbjct: 76 KDGKPNKGQILTQAVEYISHLQNQVDTQNREEVELMVKAT 115
>UVRB_PROMM (Q7TV80) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 679 Score = 29.3 bits (64), Expect = 6.9 Identities = 16/74 (21%), Positives = 33/74 (44%) Frame = +1 Query: 13 LMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYIQHLQAEERQMEAEVSALESA 192 + E +RRR++ + L +VP ++ I +E + LQ + + + + Sbjct: 563 ISETERRREIQKAYNELNGIVPRPAGKRASNSILSFLELSRRLQTDGKDADLVQITGRAV 622 Query: 193 TGADDDCDGGLSVE 234 D D D GL+++ Sbjct: 623 DALDSDQDAGLALD 636
>TAP_DROME (O16867) Basic helix-loop-helix neural transcription factor TAP| (Target of Poxn protein) (Protein biparous) Length = 398 Score = 29.3 bits (64), Expect = 6.9 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPNI---TKMDKASIIKDAIEYIQHLQ 144 ER+R LN+ L LR +P++ TK+ K I++ A YI L+ Sbjct: 163 ERNRMHNLNDALEKLRVTLPSLPEETKLTKIEILRFAHNYIFALE 207
>HES3_MOUSE (Q61657) Transcription factor HES-3 (Hairy and enhancer of split 3)| Length = 175 Score = 29.3 bits (64), Expect = 6.9 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 7/50 (14%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVP-------NITKMDKASIIKDAIEYIQHLQ 144 ME+ RR ++N L LRS++ K++KA I++ +++Y++ LQ Sbjct: 1 MEKKRRARINVSLEQLRSLLERHYSHQIRKRKLEKADILELSVKYMRSLQ 50
>NGN1_BRARE (O42606) Neurogenin 1 (Neurogenic differentiation factor 3)| (NeuroD3) (Neurogenin-related protein 1) Length = 208 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVV---PNITKMDKASIIKDAIEYI 132 ER+R LN+ L LRSV+ P+ TK+ K ++ A YI Sbjct: 79 ERNRMHNLNDALDALRSVLPAFPDDTKLTKIETLRFAHNYI 119
>TWST1_CALJA (Q8MIH1) Twist-related protein 1| Length = 203 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Frame = +1 Query: 22 RDRRRKLNEKLYTLRSVVPNI--TKMDKASIIKDAIEYI----QHLQAEE 153 R R + LNE LR ++P + K+ K +K A YI Q LQ++E Sbjct: 119 RQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDE 168
>HIS1_METJA (Q58601) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 288 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = +1 Query: 1 NKNILMERDRRRKLNEKLYTLRSVVPNITK-MDKASIIKDAIEYIQHL 141 NKN L ++++R K+N+ + ++SV+ TK + + KD +E I+ L Sbjct: 187 NKNSLKDKEKREKINQIVIAIKSVLFAETKRLIMMNAPKDKVEEIRKL 234
>BMAL1_MOUSE (Q9WTL8) Aryl hydrocarbon receptor nuclear translocator-like| protein 1 (Brain and muscle ARNT-like 1) (Arnt3) Length = 632 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 4/47 (8%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNIT----KMDKASIIKDAIEYIQHLQ 144 +E+ RR K+N + L S+VP K+DK ++++ A+++++ L+ Sbjct: 87 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 133
>ASCL2_HUMAN (Q99929) Achaete-scute homolog 2 (HASH2)| Length = 193 Score = 28.9 bits (63), Expect = 9.0 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +1 Query: 19 ERDRRRKLNEKLYTLRSVVPN---ITKMDKASIIKDAIEYIQHLQAEERQMEAEVSAL 183 ER+R + +N LR VP+ K+ K ++ A+EYI+ LQ + +A +AL Sbjct: 59 ERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNAL 116
>GLU2B_BOVIN (Q28034) Glucosidase 2 beta subunit precursor (Glucosidase II beta| subunit) (Protein kinase C substrate, 60.1 kDa protein, heavy chain) (PKCSH) (80K-H protein) (Vacuolar system-associated protein 60) (VASAP-60) Length = 533 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Frame = +1 Query: 4 KNILMERDRRRKLNEKLYTLRSVVPNITKMDKASIIKDAIEYI----QHLQAEERQMEAE 171 K ++ + ++ L +++ LR++ K ++A+ KD + Q + E+R+ E Sbjct: 156 KKLIELQAGKKSLEDQVEVLRTLKEEAEKPEEAA--KDQHRRLWEEQQAISKEQRERELA 213 Query: 172 VSALESATGADDDCDGGLSVEQVSS 246 SA + DDD DG +SV ++ + Sbjct: 214 ASAFQEL---DDDMDGAVSVAELQT 235
>BMAL1_RAT (Q9EPW1) Aryl hydrocarbon receptor nuclear translocator-like| protein 1 (Brain and muscle ARNT-like 1) (Tic) Length = 626 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 4/47 (8%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNIT----KMDKASIIKDAIEYIQHLQ 144 +E+ RR K+N + L S+VP K+DK ++++ A+++++ L+ Sbjct: 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>BMAL1_MESAU (O88529) Aryl hydrocarbon receptor nuclear translocator-like| protein 1 (Brain and muscle ARNT-like 1) Length = 626 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 4/47 (8%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNIT----KMDKASIIKDAIEYIQHLQ 144 +E+ RR K+N + L S+VP K+DK ++++ A+++++ L+ Sbjct: 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>BMAL1_HUMAN (O00327) Aryl hydrocarbon receptor nuclear translocator-like| protein 1 (Brain and muscle ARNT-like 1) (Member of PAS protein 3) (Basic-helix-loop-helix-PAS orphan MOP3) (bHLH-PAS protein JAP3) Length = 626 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 4/47 (8%) Frame = +1 Query: 16 MERDRRRKLNEKLYTLRSVVPNIT----KMDKASIIKDAIEYIQHLQ 144 +E+ RR K+N + L S+VP K+DK ++++ A+++++ L+ Sbjct: 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +3 Query: 399 QQAARRHDQGVPRARGAPPQGHHRQHHF-RLRLPNAHPLRRGT 524 +QAA+ H Q + +G PPQ R H +++ AH L +G+ Sbjct: 1664 KQAAQAHPQAQSQGQGQPPQQTQRAHQVQQVQGQQAHQLPQGS 1706 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.128 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,596,070 Number of Sequences: 219361 Number of extensions: 380229 Number of successful extensions: 2241 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 2153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2221 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
