ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63o13 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 358 bits (920), Expect = 4e-99 Identities = 182/188 (96%), Positives = 188/188 (100%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG+FDRQVTVDRPDVAGRVRIL+VHSRG Sbjct: 356 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRG 415 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 KALAKDVDFDK+ARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE Sbjct: 416 KALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 475 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 KKNAVVS++K+KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES Sbjct: 476 KKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 535 Query: 542 GLYSRSYL 565 GLYSRSYL Sbjct: 536 GLYSRSYL 543
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 357 bits (916), Expect = 1e-98 Identities = 181/188 (96%), Positives = 187/188 (99%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRG Sbjct: 379 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRG 438 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 KALAKDVDFDK+ARRTPGFTG DLQNLMNEAAILAARRDLKEISKDEI+DALERIIAGPE Sbjct: 439 KALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIAGPE 498 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 KKNAVVSE+K+KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES Sbjct: 499 KKNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 558 Query: 542 GLYSRSYL 565 GLYSRSYL Sbjct: 559 GLYSRSYL 566
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 356 bits (913), Expect = 3e-98 Identities = 181/188 (96%), Positives = 187/188 (99%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRG Sbjct: 388 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRG 447 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 KAL KDVDFDKVARRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPE Sbjct: 448 KALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPE 507 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 KKNAVVSE+K++LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES Sbjct: 508 KKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 567 Query: 542 GLYSRSYL 565 GLYSRSYL Sbjct: 568 GLYSRSYL 575
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 352 bits (904), Expect = 3e-97 Identities = 177/188 (94%), Positives = 187/188 (99%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR++IL+VHSRG Sbjct: 379 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRG 438 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 KAL KDVDF+K+ARRTPG+TGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPE Sbjct: 439 KALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPE 498 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 KKNAVVS++K+KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES Sbjct: 499 KKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 558 Query: 542 GLYSRSYL 565 GLYSRSYL Sbjct: 559 GLYSRSYL 566
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 352 bits (902), Expect = 5e-97 Identities = 178/188 (94%), Positives = 187/188 (99%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRG Sbjct: 376 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRG 435 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 KA+ KDVD++KVARRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPE Sbjct: 436 KAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPE 495 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 KKNAVVSE+K++LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES Sbjct: 496 KKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 555 Query: 542 GLYSRSYL 565 GLYSRSYL Sbjct: 556 GLYSRSYL 563
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 307 bits (787), Expect = 1e-83 Identities = 147/188 (78%), Positives = 173/188 (92%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGF GN+G+I++AATNRPDVLDSAL+RPGRFDRQV VDRPD AGR IL VH+RG Sbjct: 287 LLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARG 346 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L++DVD DK+ARRTPGFTGADL NL+NEAAILAARR+L EIS DE++DA++R++AGPE Sbjct: 347 KTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPE 406 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 KKN V+SE+++ LVAYHEAGHALVGALMP+YDPV KISIIPRG+AGGLT+F PSE+R+ES Sbjct: 407 KKNRVMSEKRKTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMES 466 Query: 542 GLYSRSYL 565 GLYSRSYL Sbjct: 467 GLYSRSYL 474
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 231 bits (590), Expect = 8e-61 Identities = 117/188 (62%), Positives = 148/188 (78%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGF GN+G+I++AATNRPDVLDSAL+RPGRFDRQV VD PD +GR ILEVH+R Sbjct: 298 LLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARN 357 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K LA +V D +ARRTPGF+GADL NL+NEAAIL ARR I+ EI DA++R++AG E Sbjct: 358 KKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGME 417 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 V S+ KR L+AYHE GHA+VG L+ ++DPV K+++IPRGQA GLT+F P+EE+ Sbjct: 418 GTPLVDSKSKR-LIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNEEQ--- 473 Query: 542 GLYSRSYL 565 GL +++ L Sbjct: 474 GLTTKAQL 481
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 224 bits (572), Expect = 1e-58 Identities = 111/188 (59%), Positives = 147/188 (78%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGF GN+G+I++AATNR DVLD+ALLRPGRFDRQVTVD PDV GR+ IL VH+R Sbjct: 299 LLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARN 358 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L + + +A+RTPGF+GADL NL+NEAAIL ARR K+I+ EI +++R+IAG E Sbjct: 359 KKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVIAGME 418 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 K A+V + ++L+AYHE GHA++G L+ +DPV K++++PRGQA GLT+F PSE++ Sbjct: 419 GK-ALVDSKTKRLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQAKGLTWFTPSEDQ--- 474 Query: 542 GLYSRSYL 565 L SRS + Sbjct: 475 SLISRSQI 482
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 224 bits (571), Expect = 1e-58 Identities = 111/177 (62%), Positives = 139/177 (78%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGF GNSG+IV+AATNRPDVLD ALLRPGRFDRQVTVD PDV GR IL +H++ Sbjct: 337 LLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQN 396 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L ++V +ARRTPGFTGADL N++NEAAI ARR + I+ E++DA++R++AG E Sbjct: 397 KKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGME 456 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 V S+ KR L+AYHE GHAL+G L P +DPV K+++IPRGQA GLT+F P E++ Sbjct: 457 GTPLVDSKSKR-LIAYHEVGHALIGTLCPGHDPVEKVTLIPRGQAQGLTWFTPDEDQ 512
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 220 bits (561), Expect = 2e-57 Identities = 102/177 (57%), Positives = 139/177 (78%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGFS N G+I++AATNR D+LD ALLRPGRFDRQ+TVDRPDV GR +L+VH+R Sbjct: 287 LLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARN 346 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L + V+ +A RTPGF+GADL+NL+NEAA++AAR++ K+I +I +A +R+IAGP Sbjct: 347 KPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPA 406 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 KK+ V+S+++R +VAYHE GH ++G ++ E D V K++I+PRGQAGG P E+R Sbjct: 407 KKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQAGGYAVMLPREDR 463
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 218 bits (556), Expect = 7e-57 Identities = 109/188 (57%), Positives = 144/188 (76%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGF GN+GVIV+AATNR D+LDSALLRPGRFDRQV+VD PD GR+ ILEVH++ Sbjct: 299 LLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKN 358 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K + V + +ARRTPGF+GADL NL+NEAAIL ARR ++ EI +++R++AG E Sbjct: 359 KKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLE 418 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 + S+ KR L+AYHE GHA++G+L+ +DPV K+++IPRGQA GLT+F PS+++ Sbjct: 419 GTPLIDSKSKR-LIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDDQ--- 474 Query: 542 GLYSRSYL 565 L SRS + Sbjct: 475 SLISRSQI 482
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 214 bits (544), Expect = 2e-55 Identities = 101/177 (57%), Positives = 135/177 (76%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGFS N G+I++AATNR D+LD ALLRPGRFDRQ+ V+RPDV GR +L+VH+R Sbjct: 292 LLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARN 351 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L DV+ +A RTPGF+GADL+NL+NEAA++AAR D +IS I +A++R+IAGP Sbjct: 352 KPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPA 411 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 KK+ V+S +++K+VA+HEAGH +VG + D V K++I+PRG AGG P E+R Sbjct: 412 KKSRVISPKEKKIVAWHEAGHTVVGVKLENADMVHKVTIVPRGMAGGYAVMLPKEDR 468
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 212 bits (540), Expect = 5e-55 Identities = 103/178 (57%), Positives = 137/178 (76%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF GN G+IV+AATNR DVLD ALLRPGRFDR+V V RPDV GR IL+VH++ Sbjct: 313 LLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKN 372 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K LA+DVD VA++TPGF GADL+N++NEAA++AARR+ I +I +A +R+IAGP Sbjct: 373 KPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPS 432 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 535 KK+ VS+++R+LVAYHEAGH +VG ++ V K++I+PRG+AGG P E+++ Sbjct: 433 KKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM 490
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 212 bits (540), Expect = 5e-55 Identities = 103/178 (57%), Positives = 137/178 (76%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF GN G+IV+AATNR DVLD ALLRPGRFDR+V V RPDV GR IL+VH++ Sbjct: 313 LLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKN 372 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K LA+DVD VA++TPGF GADL+N++NEAA++AARR+ I +I +A +R+IAGP Sbjct: 373 KPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPS 432 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 535 KK+ VS+++R+LVAYHEAGH +VG ++ V K++I+PRG+AGG P E+++ Sbjct: 433 KKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM 490
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 212 bits (539), Expect = 7e-55 Identities = 105/177 (59%), Positives = 137/177 (77%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF + G+IV+AATNRPD+LD ALLRPGRFDRQ+ + +PDV GR IL+VH+R Sbjct: 282 LLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARN 341 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K LAKDVD + VAR TPGFTGADL+NL+NEAA+LAAR+ +EI+ +EI +AL+RI G E Sbjct: 342 KKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMGLE 401 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 +K +S ++++ +A HEAGHAL+G + + D V KISIIPRG A G+T P E++ Sbjct: 402 RKGMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMALGVTQQLPIEDK 458
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 211 bits (536), Expect = 2e-54 Identities = 106/187 (56%), Positives = 140/187 (74%), Gaps = 7/187 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E Sbjct: 338 VPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAE 397 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP------- 520 +++ V++E +++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P Sbjct: 398 RRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA 457 Query: 521 SEERLES 541 S ++LES Sbjct: 458 SRQKLES 464
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 211 bits (536), Expect = 2e-54 Identities = 106/187 (56%), Positives = 140/187 (74%), Gaps = 7/187 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E Sbjct: 338 VPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAE 397 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP------- 520 +++ V++E +++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P Sbjct: 398 RRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA 457 Query: 521 SEERLES 541 S ++LES Sbjct: 458 SRQKLES 464
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 211 bits (536), Expect = 2e-54 Identities = 106/187 (56%), Positives = 140/187 (74%), Gaps = 7/187 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E Sbjct: 338 VPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAE 397 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP------- 520 +++ V++E +++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P Sbjct: 398 RRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA 457 Query: 521 SEERLES 541 S ++LES Sbjct: 458 SRQKLES 464
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 211 bits (536), Expect = 2e-54 Identities = 106/187 (56%), Positives = 140/187 (74%), Gaps = 7/187 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E Sbjct: 338 VPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAE 397 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP------- 520 +++ V++E +++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P Sbjct: 398 RRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA 457 Query: 521 SEERLES 541 S ++LES Sbjct: 458 SRQKLES 464
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 211 bits (536), Expect = 2e-54 Identities = 106/187 (56%), Positives = 140/187 (74%), Gaps = 7/187 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R Sbjct: 278 MLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRR 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA D+D +AR TPGF+GADL NL+NEAA+ AAR + + +S E A ++I+ G E Sbjct: 338 VPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAE 397 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP------- 520 +++ V++E +++ AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P Sbjct: 398 RRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA 457 Query: 521 SEERLES 541 S ++LES Sbjct: 458 SRQKLES 464
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 209 bits (533), Expect = 3e-54 Identities = 106/189 (56%), Positives = 144/189 (76%), Gaps = 7/189 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGFSGN GVIV+AATNRPDVLD AL RPGRFDRQV V PDV GR +IL+VH R Sbjct: 23 MLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRK 82 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++A+DVD +AR TPG++GADL NL+NEAA+ AAR + + ++ E A ++I GPE Sbjct: 83 VSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPE 142 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP------- 520 ++ ++++++++ AYHEAGHA+VG L+PE+DPV K++IIPRG+A G+TFF P Sbjct: 143 RRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQISI 202 Query: 521 SEERLESGL 547 S+++LES L Sbjct: 203 SQKQLESKL 211
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 209 bits (533), Expect = 3e-54 Identities = 106/189 (56%), Positives = 144/189 (76%), Gaps = 7/189 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGFSGN GVIV+AATNRPDVLD AL RPGRFDRQV V PDV GR +IL+VH R Sbjct: 277 MLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRK 336 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++A+DVD +AR TPG++GADL NL+NEAA+ AAR + + ++ E A ++I GPE Sbjct: 337 VSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPE 396 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP------- 520 ++ ++++++++ AYHEAGHA+VG L+PE+DPV K++IIPRG+A G+TFF P Sbjct: 397 RRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQISI 456 Query: 521 SEERLESGL 547 S+++LES L Sbjct: 457 SQKQLESKL 465
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 209 bits (531), Expect = 6e-54 Identities = 106/177 (59%), Positives = 137/177 (77%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGFSG++GVIV+AATNR DVLDSALLRPGRFDRQ+ V P++ GR+ IL+VHS+ Sbjct: 297 LLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKK 356 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K + KDV + +ARRTPGF+GADL NL+NEAAIL RR EI+ EI D++++IIAG E Sbjct: 357 KKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLE 416 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 S KR L+AYHEAGHA+ +P +DPV K+++IPR QA GLT+F P++++ Sbjct: 417 GSPLADSRIKR-LIAYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQ 472
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 209 bits (531), Expect = 6e-54 Identities = 107/179 (59%), Positives = 140/179 (78%), Gaps = 2/179 (1%) Frame = +2 Query: 2 LLTEMDGFSG-NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR 178 LLTEMDGFS + VIVLAATNRP+ LD ALLRPGRFDRQV VDRPD+AGR++ILE++++ Sbjct: 301 LLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAK 360 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP 358 L K+V+ +A RTPGF GADL NL+NEAA+LAAR +++ + +A+ER++AG Sbjct: 361 KIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVAGL 420 Query: 359 EKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 532 EKK+ V+S++++K+VAYHE GHALVGA+MP VAKISI+PRG A G T P+E+R Sbjct: 421 EKKSRVLSDKEKKIVAYHEVGHALVGAVMPGGGQVAKISIVPRGMAALGYTLQMPTEDR 479
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 207 bits (526), Expect = 2e-53 Identities = 109/188 (57%), Positives = 136/188 (72%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGF GN+GVIV+AATNR DVLD+ALLRPGRFDRQ+ V PDV R+ IL+VH+ Sbjct: 280 LLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQ 339 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L V + VARRT GF GADL NL+NEAAILA RR LK+I+ EI DA++R+IAG E Sbjct: 340 KKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEIDDAIDRVIAGME 399 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 ++ + ++L+AYHE GHAL L+P + PV K+++IPR QA GLT+F ER Sbjct: 400 -GTPIMDGKIKRLIAYHETGHALTATLLPNHPPVQKVTLIPRRQAKGLTWFMQDNER--- 455 Query: 542 GLYSRSYL 565 L S+S L Sbjct: 456 DLLSKSQL 463
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 204 bits (520), Expect = 1e-52 Identities = 99/178 (55%), Positives = 135/178 (75%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF GN G+I++AATNRPDVLD ALLRPGRFDRQV V PD+ GR +IL+VH R Sbjct: 278 MLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRK 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L+KDVD +AR TPGF+GADL NL+NEAA+ AAR D + +S E A ++++ G E Sbjct: 338 VPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSE 397 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 535 +++ V+S+ +++ AYHEAGH ++G L+P++DP K++IIPRG+A G+TFF P + L Sbjct: 398 RRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTL 455
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 202 bits (514), Expect = 5e-52 Identities = 100/178 (56%), Positives = 134/178 (75%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF GN GVI++AATNRPDVLD ALLRPGRFDRQV V PDV GR +IL+VH R Sbjct: 278 MLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRK 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L++DVD +AR TPGF+GADL NL+NEAA+ AAR + + +S A ++I+ G E Sbjct: 338 VPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSE 397 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 535 +++ V+S+ +++ AYHEAGH ++G L+P++DP K++IIPRGQA G+TFF P + L Sbjct: 398 RRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDIL 455
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 202 bits (513), Expect = 7e-52 Identities = 96/186 (51%), Positives = 133/186 (71%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF +GVI++AATNRPD+LD ALLRPGRFDRQ+ V PD+AGR +L VHS+G Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKG 348 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K +A D D D +A+RT G TGADL N++NEAA+L AR + I+ + +A++R+I GP Sbjct: 349 KPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPR 408 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 +K ++SEQ++K+ AYHE GH L MP+ +P+ K++I+ RG+ GG P E++ Sbjct: 409 RKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK--- 465 Query: 542 GLYSRS 559 GL +RS Sbjct: 466 GLRTRS 471
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 202 bits (513), Expect = 7e-52 Identities = 96/186 (51%), Positives = 133/186 (71%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF +GVI++AATNRPD+LD ALLRPGRFDRQ+ V PD+AGR +L VHS+G Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKG 348 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K +A D D D +A+RT G TGADL N++NEAA+L AR + I+ + +A++R+I GP Sbjct: 349 KPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPR 408 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 +K ++SEQ++K+ AYHE GH L MP+ +P+ K++I+ RG+ GG P E++ Sbjct: 409 RKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK--- 465 Query: 542 GLYSRS 559 GL +RS Sbjct: 466 GLRTRS 471
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 201 bits (512), Expect = 9e-52 Identities = 96/186 (51%), Positives = 133/186 (71%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF +GVI++AATNRPD+LD ALLRPGRFDRQ+ V PD+AGR +L VHS+G Sbjct: 289 LLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKG 348 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K +A D D D +A+RT G TGADL N++NEAA+L AR + I+ + +A++R+I GP Sbjct: 349 KPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVDRVIGGPR 408 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 +K ++SEQ++K+ AYHE GH L MP+ +P+ K++I+ RG+ GG P E++ Sbjct: 409 RKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK--- 465 Query: 542 GLYSRS 559 GL +RS Sbjct: 466 GLRTRS 471
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 199 bits (506), Expect = 5e-51 Identities = 92/177 (51%), Positives = 133/177 (75%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDG + N+G++++ ATNR DVLD ALLRPGRFDR +TV PD+ R IL++HS+G Sbjct: 338 ILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKG 397 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L+K++ FDK+A+RTPG++GA L+N++NEA++L+ R I +I +A++R++AGP Sbjct: 398 KRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRVMAGPA 457 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 KK+ V+S+++ K VAYHEAGHA+VG + + V KI+IIPRG AGG P EE+ Sbjct: 458 KKSRVISQEELKAVAYHEAGHAVVGLKVKGGNKVQKITIIPRGNAGGYNLMTPEEEK 514
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 199 bits (506), Expect = 5e-51 Identities = 106/188 (56%), Positives = 136/188 (72%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDGF N GVIV+ ATNR D+LD+ALLRPGRFDRQVTV+ PD GRV IL+VH+R Sbjct: 312 LLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARN 371 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L +DV ++A RTPGF+GADL NL+NEAAILA R I+K+E+++A +RII G Sbjct: 372 KPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADRIIGGIA 431 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 541 ++ KR L+AYHE GHA+ G+++ +D V KI++ PRG A GLT+F P E++ Sbjct: 432 GAPMEDTKNKR-LIAYHEVGHAITGSVLKSHDEVEKITLTPRGGAKGLTWFTPEEDQ--- 487 Query: 542 GLYSRSYL 565 L SRS L Sbjct: 488 SLLSRSAL 495
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 199 bits (505), Expect = 6e-51 Identities = 94/178 (52%), Positives = 132/178 (74%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF GN G+I++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +I++VH + Sbjct: 278 MLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKK 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L +VD +AR TPGF+GADL NL+NEAA+ AAR + + + A ++I G E Sbjct: 338 VPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDKITMGSE 397 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 535 +++ V++E++++ AYHEAGH +VG L+PE+DP K++IIPRG+A G+TFF P ++ L Sbjct: 398 RRSMVMTEKQKESTAYHEAGHVIVGRLVPEHDPAHKVTIIPRGRALGVTFFLPKDDVL 455
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 198 bits (503), Expect = 1e-50 Identities = 98/173 (56%), Positives = 129/173 (74%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF+ +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+ R IL+VH++ Sbjct: 354 LLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKN 413 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L+ + VA+RTPGF+GA L+N++NEA +LA R + I+ ++I +A++R+IAGP Sbjct: 414 KNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPA 473 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP 520 KK+ VVS+ RKLVAYHEAGHALVG + D V KI+IIPRGQAGG T P Sbjct: 474 KKSRVVSDADRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTP 526
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 197 bits (500), Expect = 2e-50 Identities = 97/173 (56%), Positives = 129/173 (74%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF+ +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+ R IL+VH+ Sbjct: 357 LLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAEN 416 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K L+ + VA+RTPGF+GA L+N++NEA +LA R + I+ ++I +A++R+IAGP Sbjct: 417 KNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIAGPA 476 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP 520 KK+ V+S++ RKLVAYHEAGHALVG + D V KI+IIPRGQAGG T P Sbjct: 477 KKSRVISDEDRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTP 529
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 196 bits (498), Expect = 4e-50 Identities = 98/181 (54%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Frame = +2 Query: 2 LLTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS 175 LL EMDGF GNS VIV+AATNR DVLD ALLRPGRFDR+V V PDV GR +L+VH+ Sbjct: 319 LLVEMDGFQDDGNS-VIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHA 377 Query: 176 RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAG 355 + K LA DVD VA +TPG+ GADL+N++NEAA++AAR++ KEI+ +I + ++R +AG Sbjct: 378 KNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMAG 437 Query: 356 PEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERL 535 P KK+ + S ++R++VAYHEAGHA+VG ++ V K++++PRG+ GG P EE + Sbjct: 438 PAKKDRIQSMREREIVAYHEAGHAIVGLVLENGSTVRKVTVVPRGRIGGYMLALPDEEIM 497 Query: 536 E 538 + Sbjct: 498 Q 498
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 189 bits (481), Expect = 4e-48 Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF +G+I+LAATNRPDVLD ALLRPGRFDRQV VDRPD+ GR IL +H++ Sbjct: 266 LLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQN 325 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA +VD VAR T G++GADL N++NEAA+LA R ++ + ++ +A+E+ + G + Sbjct: 326 VKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQ 385 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRG-QAGGLTFFAPSEER 532 KK+ V+ E++R+++AYHE GHAL G D V KI+IIPRG A G TF P ++R Sbjct: 386 KKSRVIREEERRIIAYHETGHALAGTFTKGADKVHKITIIPRGTSALGYTFHIPEDDR 443
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 187 bits (475), Expect = 2e-47 Identities = 98/179 (54%), Positives = 129/179 (72%), Gaps = 2/179 (1%) Frame = +2 Query: 2 LLTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR 178 LL EMDGF S N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD GRV IL+VH + Sbjct: 297 LLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIK 356 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP 358 G LA DV+ +VA+ T G GADL N++NEAA+LA R + KE+ + + +A+ER IAG Sbjct: 357 GVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGL 416 Query: 359 EKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 532 EKK+ +S +++K+VAYHE+GHA++ + V K+SIIPRG A G T P E + Sbjct: 417 EKKSRRISPKEKKIVAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENK 475
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 186 bits (473), Expect = 3e-47 Identities = 98/179 (54%), Positives = 128/179 (71%), Gaps = 2/179 (1%) Frame = +2 Query: 2 LLTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR 178 LL EMDGF S N+ VIVLAATNRP++LD ALLRPGRFDRQV VD+PD GRV IL+VH + Sbjct: 303 LLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIK 362 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP 358 LA DVD ++A+ T G GADL N++NEAA+LA R + KE+ + + +A+ER IAG Sbjct: 363 PVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGL 422 Query: 359 EKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 532 EKK+ +S +++K+VAYHE+GHA++ + V K+SIIPRG A G T P E + Sbjct: 423 EKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 481
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 186 bits (473), Expect = 3e-47 Identities = 98/179 (54%), Positives = 129/179 (72%), Gaps = 2/179 (1%) Frame = +2 Query: 2 LLTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR 178 LL EMDGF S N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD GRV IL+VH + Sbjct: 297 LLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIK 356 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP 358 G LA DV+ +VA+ T G GADL N++NEAA+LA R + KE+ + + +A+ER IAG Sbjct: 357 GVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGL 416 Query: 359 EKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 532 EKK+ +S +++K+VAYHE+GHA++ + V K+SIIPRG A G T P E + Sbjct: 417 EKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 475
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 180 bits (456), Expect = 3e-45 Identities = 90/182 (49%), Positives = 123/182 (67%), Gaps = 4/182 (2%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+ GR I +VH R Sbjct: 434 LLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 493 Query: 182 KALAKDVDFDKVARR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 L ++ DK+AR+ TPGF+GAD+ N+ NEAA++AAR I++ A+ER+I Sbjct: 494 LKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVI 553 Query: 350 AGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 529 G EKK V+ +++K VAYHEAGHA+ G + DP+ K+SIIPRG+ G + P E+ Sbjct: 554 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQ 613 Query: 530 RL 535 L Sbjct: 614 YL 615
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 179 bits (454), Expect = 5e-45 Identities = 90/182 (49%), Positives = 123/182 (67%), Gaps = 4/182 (2%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+ GR I +VH R Sbjct: 433 LLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 492 Query: 182 KALAKDVDFDKVARR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 L ++ DK+AR+ TPGF+GAD+ N+ NEAA++AAR I++ A+ER+I Sbjct: 493 LKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVI 552 Query: 350 AGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 529 G EKK V+ +++K VAYHEAGHA+ G + DP+ K+SIIPRG+ G + P E+ Sbjct: 553 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQ 612 Query: 530 RL 535 L Sbjct: 613 YL 614
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 177 bits (449), Expect = 2e-44 Identities = 88/189 (46%), Positives = 128/189 (67%), Gaps = 7/189 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF N GV+++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + Sbjct: 281 MLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKK 340 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 V +AR TPGF+GA+L NL+NEAA++AAR KE+ ++ +A ++++ G Sbjct: 341 IKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVA 400 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT-------FFAP 520 +++ +SE++++L AYHE GHALVG P P+ K +IIPRG A G+ ++ Sbjct: 401 RRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ 460 Query: 521 SEERLESGL 547 + E++ES + Sbjct: 461 NREQMESSI 469
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 177 bits (448), Expect = 2e-44 Identities = 88/189 (46%), Positives = 128/189 (67%), Gaps = 7/189 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF N GV+++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + Sbjct: 281 MLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKK 340 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 V +AR TPGF+GA+L NL+NEAA++AAR KE+ ++ +A ++++ G Sbjct: 341 IKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVV 400 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT-------FFAP 520 +++ +SE++++L AYHE GHALVG P P+ K +IIPRG A G+ ++ Sbjct: 401 RRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ 460 Query: 521 SEERLESGL 547 + E++ES + Sbjct: 461 NREQMESSI 469
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 175 bits (444), Expect = 7e-44 Identities = 92/192 (47%), Positives = 124/192 (64%), Gaps = 4/192 (2%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR- 178 +L EMDGF+ ++ V+VLA TNRPD+LD AL RPGRFDRQ+ + PD+ GR I +VH R Sbjct: 300 MLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRP 359 Query: 179 ---GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 +L+KD K+A TPGFTGAD+ N+ NEAA++AAR + + A+ER+I Sbjct: 360 LKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVI 419 Query: 350 AGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 529 G EKK V+ ++ VAYHEAGHA+VG + DP+ K+SIIPRG+ G + P E+ Sbjct: 420 GGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQ 479 Query: 530 RLESGLYSRSYL 565 LY+R L Sbjct: 480 ----FLYTREQL 487
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 169 bits (429), Expect = 4e-42 Identities = 87/179 (48%), Positives = 123/179 (68%), Gaps = 4/179 (2%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +L EMDGF+ V+VLA TNRPD+LD ALLRPGRFDR + +D+P++ GR I VH Sbjct: 475 MLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHH 534 Query: 182 KALAKDVDFD---KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 352 LA ++ FD ++A TPGF+GAD+ N+ NEAA++AAR D + + A+ER+I Sbjct: 535 LKLAGEI-FDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIG 593 Query: 353 GPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSE 526 G E+K+ ++S +++K+VAYHEAGHA+ G + DP+ K+SIIPRGQ A G + P + Sbjct: 594 GVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGD 652
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 169 bits (429), Expect = 4e-42 Identities = 94/187 (50%), Positives = 125/187 (66%), Gaps = 7/187 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF+ + V+VLA TNRPDVLD+AL+RPGRFDR + +D PDV GR +I VH + Sbjct: 416 LLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKR 475 Query: 182 KALAKDVDFD------KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER 343 L + D K+A TPGFTGAD+ N NEAA++AAR + I+ A+ER Sbjct: 476 LNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIER 535 Query: 344 IIAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAP 520 +IAG EKK V+S+++++ VAYHEAGHA+ G + DP+ K+SIIPRGQ A G + P Sbjct: 536 VIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLP 595 Query: 521 SEERLES 541 ++ L S Sbjct: 596 PDQYLIS 602
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 162 bits (409), Expect = 8e-40 Identities = 82/176 (46%), Positives = 117/176 (66%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF G+IVL ATN+ +VLD ALLRPGRFD Q+ V P GR+ +L ++ + Sbjct: 290 LLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKK 349 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++D +K+A T G+TGAD+QNL+N+AAI AA R+ + + DA +R+I GP Sbjct: 350 VKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDRLIMGPA 409 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 529 K+ + +Q ++ A+HEAGHALV L + P+ K++IIPRG+AGGLT F ++ Sbjct: 410 KRRP-LDDQTNRVSAFHEAGHALVALLTADSIPLHKVTIIPRGEAGGLTSFLQEKD 464
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 159 bits (403), Expect = 4e-39 Identities = 79/179 (44%), Positives = 117/179 (65%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL E+DGFS SG+I++ ATN P+ LD AL RPGRFD+ V VD PDV GR IL+ H + Sbjct: 404 LLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKK 463 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA +VD +AR TPG +GA+L NL+N+AA+ A +++ + A ++I+ G E Sbjct: 464 ITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAE 523 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLE 538 +K V+++ RK A+HEAGHA++ P+ K +I+PRG+A G+TF P ++++ Sbjct: 524 RKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPRGRALGITFQLPEMDKVD 582
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 154 bits (389), Expect = 2e-37 Identities = 76/177 (42%), Positives = 114/177 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR IL+ + Sbjct: 405 LLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNK 464 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K VD + +AR T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE Sbjct: 465 IKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPE 524 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 +++ + + + + AYHE+GHA++ + P+ K +I+PRG G P +R Sbjct: 525 RRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 154 bits (389), Expect = 2e-37 Identities = 76/177 (42%), Positives = 114/177 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR IL+ + Sbjct: 405 LLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNK 464 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K VD + +AR T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE Sbjct: 465 IKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPE 524 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 +++ + + + + AYHE+GHA++ + P+ K +I+PRG G P +R Sbjct: 525 RRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 581
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 152 bits (385), Expect = 5e-37 Identities = 75/177 (42%), Positives = 114/177 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR IL+ + Sbjct: 463 LLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNK 522 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 + VD + +AR T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE Sbjct: 523 IKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPE 582 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 532 +++ + + + + AYHE+GHA++ + P+ K +I+PRG G P +R Sbjct: 583 RRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDR 639
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 151 bits (381), Expect = 1e-36 Identities = 78/177 (44%), Positives = 116/177 (65%), Gaps = 1/177 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL+EMDGF+ N G+IV+AATNR D LD ALLRPGRFD +VTV +PD+AGRV I + Sbjct: 325 LLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSK 384 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 + +D +A+ + GFTGAD++N++N+AA+ AA + E++ + +A +R++ GP Sbjct: 385 IVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPA 444 Query: 362 KKNA-VVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 529 + + E+ + AYHEAGH LV + P+ K++IIPRGQ+ G T P ++ Sbjct: 445 RTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPRGQSLGHTAMLPEKD 501
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 147 bits (370), Expect = 3e-35 Identities = 79/181 (43%), Positives = 112/181 (61%), Gaps = 3/181 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDG VIVLA+TNR D+LD AL+RPGR DR V +D P + R I E H + Sbjct: 436 LLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKS 495 Query: 182 KALAKDVDF--DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAG 355 L + F ++A TPGF+GAD+ N+ NEAA+ AAR + A+ER++AG Sbjct: 496 LKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAG 555 Query: 356 PEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 532 KK+ ++S++++K+VA+HE+GHALVG ++ + V K+SI PR A G P ++ Sbjct: 556 TAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQH 615 Query: 533 L 535 L Sbjct: 616 L 616
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 116 bits (290), Expect = 5e-26 Identities = 55/115 (47%), Positives = 78/115 (67%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF + ++AATNRPDVLD A+LRPGRFDR V V P + R +IL++H Sbjct: 286 LLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEK 345 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 346 LA+D+DF K+A+ T G +GADL+ + EA + A RRD + + +E +A+E++ Sbjct: 346 MTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 113 bits (282), Expect = 4e-25 Identities = 59/128 (46%), Positives = 85/128 (66%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL E+DGF V ++AATNRPD+LD ALLRPGRFDR + V P+ GR IL++H+ G Sbjct: 278 LLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSG 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ALA++VD + +AR T G +GADL+ + EA + A R + E++ + DA+++I+ G E Sbjct: 338 MALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM-GVE 396 Query: 362 KKNAVVSE 385 K+ E Sbjct: 397 KEEEYKQE 404
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 113 bits (282), Expect = 4e-25 Identities = 61/137 (44%), Positives = 85/137 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF + V+AATNR D+LD ALLRPGRFDR + + PD GR I ++H+R Sbjct: 306 LLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRD 365 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA+DVD K+A+ T G +GAD++ + EA ++A R D ++ D+ A++R++ Sbjct: 366 MNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMG--- 422 Query: 362 KKNAVVSEQKRKLVAYH 412 KK E KR AYH Sbjct: 423 KKEEESGEFKR---AYH 436
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 112 bits (281), Expect = 6e-25 Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 2/109 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG G VIV+ ATNRPD +D AL RPGRFDR++ + PD GR IL+VH+R Sbjct: 336 LLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRN 395 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 322 + DVD DK+A T G+TGADL L EAAI A RR D K+++ D+ Sbjct: 396 MPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQ 444 Score = 103 bits (256), Expect = 4e-22 Identities = 51/97 (52%), Positives = 67/97 (69%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDG + V+++AATNRPD+LD ALLRPGRFDR + V PD R IL+VH++ Sbjct: 612 LLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 671 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAAR 292 LA+DV + +A + G+TGADL+ L+ EA I A R Sbjct: 672 VPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 111 bits (278), Expect = 1e-24 Identities = 62/131 (47%), Positives = 81/131 (61%), Gaps = 3/131 (2%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG G VIV+AATNR D +D AL RPGRFDR++ + PD GR IL++H+RG Sbjct: 313 LLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRG 372 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS---DALERIIA 352 L+ DV+ +A T GF GAD+++L EAA+ A RR L EI DE ++R+I Sbjct: 373 MPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIV 432 Query: 353 GPEKKNAVVSE 385 E +SE Sbjct: 433 KREDFKGALSE 443 Score = 101 bits (251), Expect = 2e-21 Identities = 50/99 (50%), Positives = 68/99 (68%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTE+DG V+V+AATNRPD++D AL+R GRFDR V V +P + GR +IL++H++ Sbjct: 587 LLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQD 646 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 298 LA DV ++A R G+ G+DL N+ EAAI A R D Sbjct: 647 TPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDD 685
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 111 bits (277), Expect = 2e-24 Identities = 59/136 (43%), Positives = 84/136 (61%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF V ++ ATNRPD+LD A+LRPGRFDR + V PD GR+ IL++H+R Sbjct: 297 LLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRK 356 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 LA+DV+ +++A+ T G GA+L+ + EA + A R ++ D+ A+E+I+ E Sbjct: 357 MNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIM---E 413 Query: 362 KKNAVVSEQKRKLVAY 409 KK V E V Y Sbjct: 414 KKKVKVKEPAHLDVLY 429
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 110 bits (275), Expect = 3e-24 Identities = 53/115 (46%), Positives = 76/115 (66%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF + ++AATNRPDVLD A+LRPGRFDR V V P + R +IL++H Sbjct: 286 LLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGK 345 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 346 LA D+DF K+A+ T G +GADL+ + EA + A R+D + ++ +A+E++ Sbjct: 346 MTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 110 bits (275), Expect = 3e-24 Identities = 57/103 (55%), Positives = 70/103 (67%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL MDG VIV+AATNRPD +D AL RPGRFDR++ + PD GR ILE+H+R Sbjct: 306 LLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRK 365 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 310 LA+DVD +++A T GF GADL+ L EAA+ A RR L EI Sbjct: 366 MPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEI 408 Score = 107 bits (267), Expect = 2e-23 Identities = 51/116 (43%), Positives = 81/116 (69%), Gaps = 1/116 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTE+DG V+V+AATNRPD++D ALLRPGR +R + + PD RV I ++H RG Sbjct: 580 LLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRG 639 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE-ISKDEISDALERI 346 K LA DV+ +++A +T G++GAD++ + EA +LA R +K ++++E +A +++ Sbjct: 640 KPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKL 695
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 108 bits (270), Expect = 1e-23 Identities = 55/117 (47%), Positives = 77/117 (65%), Gaps = 2/117 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT +DG +GV+V+ ATNRPD++D ALLR GRFD+ + + PD R+ IL+VH++ Sbjct: 592 LLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKN 651 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEISKDEISDALERI 346 LA DVD + +A+RT G+ GADL+NL EA + A R D +S+ DAL+ I Sbjct: 652 MPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTI 708 Score = 90.9 bits (224), Expect = 2e-18 Identities = 59/141 (41%), Positives = 82/141 (58%), Gaps = 8/141 (5%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG VIV+ ATNR D +D AL RPGRFDR++ + PD GR IL +H+R Sbjct: 314 LLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRN 373 Query: 182 KALA-----KDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE--ISDALE 340 L K+ +++A T GF GADL L+ E+A+ A RR L EI D+ ++ LE Sbjct: 374 MPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILE 433 Query: 341 R-IIAGPEKKNAVVSEQKRKL 400 + ++ + KNA+ S + L Sbjct: 434 KMVVTEDDFKNALKSIEPSSL 454
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 108 bits (269), Expect = 1e-23 Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTE+DG V+V+AATNRPD++D ALLRPGR DR + V PD R+ I ++H+R Sbjct: 577 LLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRS 636 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK-----EISKDEISDALERI 346 LA+DV+ +++A++T G+TGAD++ L EAA+LA R + E+ E+ + L+ Sbjct: 637 MNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQS- 695 Query: 347 IAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSE 526 I+G + AV E + A E A G + + KI ++ +P++ Sbjct: 696 ISGTFRAAAV--ELNSVIKATKERESAEAGEFSELKNAIGKI----------ISVLSPAK 743 Query: 527 ERLES 541 E++E+ Sbjct: 744 EKIEA 748 Score = 107 bits (267), Expect = 2e-23 Identities = 56/103 (54%), Positives = 68/103 (66%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG G V+V+ ATNRP+ LD AL RPGRFDR++ + PD GR IL++H+R Sbjct: 303 LLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRN 362 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 310 LA+DVD D +A T GF GADL L EAA+ A RR L I Sbjct: 363 MPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSI 405
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 107 bits (268), Expect = 2e-23 Identities = 55/122 (45%), Positives = 82/122 (67%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL E+DGF V V+AATNR D++D A+LRPGRFDR + V P + GR+ IL +H+R Sbjct: 266 LLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRK 325 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 +A DVD + +A+ T GF+GADL+ ++ EA A RR + I+ D++ A+E++ A + Sbjct: 326 AKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKAALD 385 Query: 362 KK 367 K+ Sbjct: 386 KR 387
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 106 bits (265), Expect = 4e-23 Identities = 60/124 (48%), Positives = 80/124 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF V V+AATNRPD+LD ALLRPGRFDR + V PD GR+ IL+VH+R Sbjct: 265 LLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTR- 323 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K K VD +A T G +GADL+ + EA + A R +++D+ A++++I G E Sbjct: 324 KMNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI-GSE 382 Query: 362 KKNA 373 K+ A Sbjct: 383 KRLA 386
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 106 bits (265), Expect = 4e-23 Identities = 54/117 (46%), Positives = 75/117 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL+EMDGF + ++AATNR D+LDSA+LRPGRFDR + V P+ R RILE+H+ Sbjct: 279 LLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGE 338 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 352 +A VDF +A T F+GA L +L EA + A R D E+ + + DA E+++A Sbjct: 339 MNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVA 395
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 105 bits (263), Expect = 7e-23 Identities = 50/124 (40%), Positives = 79/124 (63%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 ++ ++DGF + VL ATNRPD LD ALLRPGR DR+V PD+ GR +I ++H+R Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRT 354 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 +D+ F+ +AR P TGAD++++ EA + A R K +++ + DA+ ++I G + Sbjct: 355 MNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414 Query: 362 KKNA 373 K +A Sbjct: 415 KFSA 418
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 105 bits (263), Expect = 7e-23 Identities = 50/124 (40%), Positives = 79/124 (63%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 ++ ++DGF + VL ATNRPD LD ALLRPGR DR+V PD+ GR +I ++H+R Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRT 354 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 +D+ F+ +AR P TGAD++++ EA + A R K +++ + DA+ ++I G + Sbjct: 355 MNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414 Query: 362 KKNA 373 K +A Sbjct: 415 KFSA 418
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 105 bits (262), Expect = 9e-23 Identities = 55/121 (45%), Positives = 76/121 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF V V+AATNRPD+LD ALLRPGRFDR + V PD GR+ IL+VH+R Sbjct: 267 LLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRR 326 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L K VD +A T G +GADL+ + EA + A R +++++ A+++++ Sbjct: 327 MKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNER 385 Query: 362 K 364 K Sbjct: 386 K 386
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 105 bits (261), Expect = 1e-22 Identities = 57/122 (46%), Positives = 79/122 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF V V+AATNRPD+LD ALLRPGRFDR + V PD GR+ IL+VH+R Sbjct: 264 LLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRR 323 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + VD +A T G +GADL+ + EA + A R +++++ A+++++ G E Sbjct: 324 MKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVL-GNE 381 Query: 362 KK 367 KK Sbjct: 382 KK 383
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 105 bits (261), Expect = 1e-22 Identities = 50/116 (43%), Positives = 78/116 (67%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL E+DGF V V+ ATNR D+LD A+LRPGRFDR + V P GR++I ++H+R Sbjct: 268 LLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRK 327 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 LA+DVDF ++AR T G +GAD++ + EA + A R + +++ + + A+E+++ Sbjct: 328 MKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVL 383
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 105 bits (261), Expect = 1e-22 Identities = 48/121 (39%), Positives = 79/121 (65%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 L+T++DGF + VL ATNRP+ LD AL+RPGR DR+V PD+ GR IL +H++ Sbjct: 306 LITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKS 365 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 A+ KD+ ++ +AR P TGA+L+++ EA + A R + ++ + DA+++++ G + Sbjct: 366 MAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQ 425 Query: 362 K 364 K Sbjct: 426 K 426
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 105 bits (261), Expect = 1e-22 Identities = 55/121 (45%), Positives = 77/121 (63%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF V V+AATNRPD+LD ALLRPGRFDR + V PD GR+ IL+VH+R Sbjct: 267 LLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRR 326 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L K+VD +A T G +GADL+ + EA + A R +++++ A+++++ Sbjct: 327 MKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNER 385 Query: 362 K 364 K Sbjct: 386 K 386
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 103 bits (257), Expect = 3e-22 Identities = 48/124 (38%), Positives = 80/124 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 L+ ++DGF + VL ATNRPD LD AL+RPGR DR+V PD+AGR IL++H++ Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQ 363 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ +D+ +D +AR P TGA+++++ EA + A R K ++ + +A+ +++ G Sbjct: 364 MSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYA 423 Query: 362 KKNA 373 K +A Sbjct: 424 KFSA 427
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 103 bits (257), Expect = 3e-22 Identities = 49/124 (39%), Positives = 78/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 ++ ++DGF + VL ATNRPD LD ALLRPGR DR+V PD+ R +I ++H+R Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 +D+ F+ +AR P TGAD++++ EA + A R K +++ + DA+ ++I G + Sbjct: 355 MNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414 Query: 362 KKNA 373 K +A Sbjct: 415 KFSA 418
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 103 bits (257), Expect = 3e-22 Identities = 49/124 (39%), Positives = 78/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 ++ ++DGF + VL ATNRPD LD ALLRPGR DR+V PD+ R +I ++H+R Sbjct: 294 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 353 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 +D+ F+ +AR P TGAD++++ EA + A R K +++ + DA+ ++I G + Sbjct: 354 MNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 413 Query: 362 KKNA 373 K +A Sbjct: 414 KFSA 417
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 103 bits (256), Expect = 4e-22 Identities = 52/110 (47%), Positives = 75/110 (68%), Gaps = 2/110 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG S V+V+AATNRP+ +D AL R GRFDR+V V PD GR+ IL +H++ Sbjct: 348 LLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKN 407 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAI--LAARRDLKEISKDEI 325 LA DVD +++A T G+ G+DL +L +EAA+ + + D+ ++ +DEI Sbjct: 408 MKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEI 457 Score = 93.6 bits (231), Expect = 4e-19 Identities = 62/168 (36%), Positives = 88/168 (52%), Gaps = 2/168 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG + V V+ ATNRPD +D AL+RPGR D+ + V PD R IL+ R Sbjct: 623 LLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRH 682 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 +A+DVD VA+ T GF+GADL+ ++ A LA + ++E K E Sbjct: 683 TPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVM 742 Query: 362 KKNAVVSEQKRKLV--AYHEAGHALVGALMPEYDPVAKISIIPRGQAG 499 ++A VS+ +R V A A ++ A + Y+ A + RG G Sbjct: 743 DEDASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGLTG 790
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 102 bits (255), Expect = 6e-22 Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 334 LA DVD ++VA T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 387 MKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 95.9 bits (237), Expect = 7e-20 Identities = 46/101 (45%), Positives = 65/101 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + + PD RV IL+ + R Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 662 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 304 +AKDVD + +A+ T GF+GADL + A LA R ++ Sbjct: 663 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 102 bits (255), Expect = 6e-22 Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 334 LA DVD ++VA T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 387 MKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 95.9 bits (237), Expect = 7e-20 Identities = 46/101 (45%), Positives = 65/101 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + + PD RV IL+ + R Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 662 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 304 +AKDVD + +A+ T GF+GADL + A LA R ++ Sbjct: 663 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 102 bits (255), Expect = 6e-22 Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 334 LA DVD ++VA T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 387 MKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 95.9 bits (237), Expect = 7e-20 Identities = 46/101 (45%), Positives = 65/101 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + + PD RV IL+ + R Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 662 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 304 +AKDVD + +A+ T GF+GADL + A LA R ++ Sbjct: 663 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 102 bits (255), Expect = 6e-22 Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ Sbjct: 327 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 334 LA DVD ++VA T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 387 MKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438 Score = 95.9 bits (237), Expect = 7e-20 Identities = 46/101 (45%), Positives = 65/101 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + + PD RV IL+ + R Sbjct: 603 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 662 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 304 +AKDVD + +A+ T GF+GADL + A LA R ++ Sbjct: 663 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 102 bits (255), Expect = 6e-22 Identities = 51/110 (46%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG S V+V+AATNRP+ +D AL R GRFDR+V + PD GR+ +L +H++ Sbjct: 338 LLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKN 397 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAI--LAARRDLKEISKDEI 325 LA DVD + +A T G+ GAD+ +L +EAA+ + + DL ++ +DEI Sbjct: 398 MKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEI 447 Score = 82.4 bits (202), Expect = 8e-16 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 13/183 (7%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG + V V+ ATNRPD +D A+LRPGR D+ + V PD R+ IL R Sbjct: 614 LLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRK 673 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILA------------ARRDLKEISKD-E 322 L ++ +A+ T GF+GADL ++ AA A A +++K +D E Sbjct: 674 TPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVE 733 Query: 323 ISDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 502 ++D + PE ++ A A ++ A + Y+ ++ RGQ Sbjct: 734 MTDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSN 793 Query: 503 LTF 511 F Sbjct: 794 FNF 796
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 102 bits (255), Expect = 6e-22 Identities = 53/121 (43%), Positives = 74/121 (61%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL EMDGF V ++AATNRPD+LD A+LRPGRFDR + + PD GR+ IL++H+ Sbjct: 275 LLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTE- 333 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K K VD +VA+ GADL+ + EA + A R + + I D+ +A+ +I E Sbjct: 334 KMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKE 393 Query: 362 K 364 K Sbjct: 394 K 394
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 102 bits (254), Expect = 8e-22 Identities = 49/107 (45%), Positives = 71/107 (66%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG G S ++V+AATNRP+ +D AL R GRFDR++ + PD GR+ IL +H++ Sbjct: 334 LLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN 393 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 322 LA DVD +++A GF GADL +L +EAA+ R ++ I ++ Sbjct: 394 MKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLED 440 Score = 92.0 bits (227), Expect = 1e-18 Identities = 44/102 (43%), Positives = 65/102 (63%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LTEMDG + V ++ ATNRPD++D A+LRPGR D+ + + PD A R +IL+ R Sbjct: 611 VLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRK 670 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 307 L+KD+D +A+ T GF+GADL + A LA R +++ Sbjct: 671 TPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEK 712
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 102 bits (253), Expect = 1e-21 Identities = 51/125 (40%), Positives = 83/125 (66%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGFS + + V+AATNR D+LD AL+R GR DR++ P R RIL++HSR Sbjct: 303 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRK 362 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A + Sbjct: 363 MNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA--K 420 Query: 362 KKNAV 376 KK+++ Sbjct: 421 KKSSL 425
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 101 bits (251), Expect = 2e-21 Identities = 49/117 (41%), Positives = 77/117 (65%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGFS + + V+AATNR D+LD AL+R GR DR++ P R RIL++HSR Sbjct: 298 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 357 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 352 + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 358 MNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 414
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 101 bits (251), Expect = 2e-21 Identities = 49/117 (41%), Positives = 77/117 (65%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGFS + + V+AATNR D+LD AL+R GR DR++ P R RIL++HSR Sbjct: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 352 + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 357 MNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA 413
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 100 bits (250), Expect = 2e-21 Identities = 55/112 (49%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+AATNRP+ +D AL R GRFDR+V + PD GR+ IL++H++ Sbjct: 328 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKN 387 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 334 L+ DVD ++VA T G GADL L +EAA+ A R+ + I +DE DA Sbjct: 388 MKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 439 Score = 95.1 bits (235), Expect = 1e-19 Identities = 46/101 (45%), Positives = 65/101 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + + PD R+ IL+ + R Sbjct: 604 ILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRK 663 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 304 +AKDVD D +A+ T GF+GADL + A LA R ++ Sbjct: 664 SPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 100 bits (249), Expect = 3e-21 Identities = 49/115 (42%), Positives = 72/115 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL+EMDGF + ++AATNR D+LD A+LRPGRFDR + V P+V GR +I +H+R Sbjct: 276 LLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRA 335 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 346 +A VDF ++A T +GAD++ + EA + A R D E+ + A E++ Sbjct: 336 MNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQSAREKL 390
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 100 bits (248), Expect = 4e-21 Identities = 49/117 (41%), Positives = 77/117 (65%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGFS + + V+AATNR D+LD AL+R GR DR++ P R RIL++HSR Sbjct: 293 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRK 352 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 352 + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 353 MNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 409
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 100 bits (248), Expect = 4e-21 Identities = 52/112 (46%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + V+V+AATNRP+ +D AL R GRFDR++ + PD GR+ IL +H++ Sbjct: 333 LLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKN 392 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 334 L +DVD ++VA GF GADL +L +EAAI R ++ I +D+ DA Sbjct: 393 MKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDA 444 Score = 90.9 bits (224), Expect = 2e-18 Identities = 43/107 (40%), Positives = 66/107 (61%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LTEMDG + V ++ ATNRPD++D A+LRPGR D+ + + PD A R++I + R Sbjct: 609 VLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK 668 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 322 L+ D+D + +A+ T GF+GADL + A LA R ++ + E Sbjct: 669 TPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQE 715
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 100 bits (248), Expect = 4e-21 Identities = 52/130 (40%), Positives = 75/130 (57%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT+MDGF ++ ATNRPD LD ALLRPGR DR+V + P+ AGR+ I ++H+ Sbjct: 308 LLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAK 367 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 + DF+ + + GF GAD++N EA A R D I+ D++ A+ R +A + Sbjct: 368 VKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAV-RKVAEVK 426 Query: 362 KKNAVVSEQK 391 K + QK Sbjct: 427 KLEGTIEYQK 436
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 99.8 bits (247), Expect = 5e-21 Identities = 46/124 (37%), Positives = 77/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 L+ ++DGF + VL ATNRPD LD AL+RPGR DR++ PD+ GR I ++H+R Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ +D+ F+ +AR P TGA+++++ EA + A R K ++ + +A+ ++I Sbjct: 362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYA 421 Query: 362 KKNA 373 K +A Sbjct: 422 KFSA 425
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 99.8 bits (247), Expect = 5e-21 Identities = 49/100 (49%), Positives = 66/100 (66%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG G++VLAATNRP +D+AL+RPGRFD + V PD+ R IL+VH+R Sbjct: 414 LLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRN 473 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 301 L DVD K+A T FTGA+L+ L E+ ++ R ++ Sbjct: 474 MTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENI 513 Score = 72.8 bits (177), Expect = 6e-13 Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 3/131 (2%) Frame = +2 Query: 2 LLTEMDGFSGNSG---VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH 172 L T MD +S V+V+A+TNR D +D AL R GRFD V V P+ R++IL+++ Sbjct: 149 LFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLY 208 Query: 173 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 352 ++ L VD +A G+ GADL+ L EA I A++R + + + + Sbjct: 209 TKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKIAKSVV 268 Query: 353 GPEKKNAVVSE 385 GP + E Sbjct: 269 GPSINRGITVE 279
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 99.4 bits (246), Expect = 6e-21 Identities = 46/124 (37%), Positives = 77/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 L+ ++DGF + VL ATNRPD LD AL+RPGR DR++ PD+ GR I ++H+R Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 360 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ +D+ F+ +AR P TGA+++++ EA + A R K ++ + +A+ ++I Sbjct: 361 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 420 Query: 362 KKNA 373 K +A Sbjct: 421 KFSA 424
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 99.4 bits (246), Expect = 6e-21 Identities = 46/124 (37%), Positives = 77/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 L+ ++DGF + VL ATNRPD LD AL+RPGR DR++ PD+ GR I ++H+R Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 360 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ +D+ F+ +AR P TGA+++++ EA + A R K ++ + +A+ ++I Sbjct: 361 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 420 Query: 362 KKNA 373 K +A Sbjct: 421 KFSA 424
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 99.4 bits (246), Expect = 6e-21 Identities = 46/124 (37%), Positives = 77/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 L+ ++DGF + VL ATNRPD LD AL+RPGR DR++ PD+ GR I ++H+R Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 360 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ +D+ F+ +AR P TGA+++++ EA + A R K ++ + +A+ ++I Sbjct: 361 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 420 Query: 362 KKNA 373 K +A Sbjct: 421 KFSA 424
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 98.6 bits (244), Expect = 1e-20 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 17/179 (9%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL E+DG G +GV++ ATNRP+VLD ALLRPGRFD+ V V P RV IL+ + + Sbjct: 1158 LLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQT 1217 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 K + + RT GFT ADL LMNE+A+ A + + + +ER+ Sbjct: 1218 LGYQKTMPWAYFGERTVGFTAADLATLMNESALKAILNQSNH-TIETLEHGIERLTTSES 1276 Query: 362 KKNAVVSEQKR-----------------KLVAYHEAGHALVGALMPEYDPVAKISIIPR 487 +K V+ ++K +AY++AG L+ + + + S+ PR Sbjct: 1277 EKYTVLKKEKEFKNKTTTPLLNSSRIYSLRLAYYQAGKLLLSYALETHPKTMRASLWPR 1335
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 98.2 bits (243), Expect = 1e-20 Identities = 48/107 (44%), Positives = 69/107 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ Sbjct: 332 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 391 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 322 LA+DVD ++V++ T G+ GADL L EAA+ R + I D+ Sbjct: 392 MKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438 Score = 89.0 bits (219), Expect = 9e-18 Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 1/107 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG + V ++ ATNRPD++D ALLRPGR D+ + + PD R +I + R Sbjct: 608 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK 667 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEISKD 319 +AKDVD +A+ T GF+GAD+ + + A R ++ K+I K+ Sbjct: 668 SPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKE 714
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 97.8 bits (242), Expect = 2e-20 Identities = 50/112 (44%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ Sbjct: 332 LLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKN 391 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 334 L+ DVD +++A+ T G+ GADL L EAA+ R + I +DE DA Sbjct: 392 MKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 443 Score = 90.5 bits (223), Expect = 3e-18 Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 1/110 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG S V ++ ATNRPD++D ALLRPGR D+ + + PD R +I + R Sbjct: 608 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRK 667 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEISKDEIS 328 +AK+VD +AR T GF+GAD+ + A A R ++ K+I ++ S Sbjct: 668 SPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKS 717
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 97.8 bits (242), Expect = 2e-20 Identities = 45/121 (37%), Positives = 77/121 (63%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 L+T++DGF + V+ ATNRP+ LD ALLRPGR DR+V PD+ GR I +HS+ Sbjct: 336 LITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKS 395 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ + + ++ ++R P TGA+L+++ EA + A R K ++ + A++++I+G + Sbjct: 396 MSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYK 455 Query: 362 K 364 K Sbjct: 456 K 456
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 97.1 bits (240), Expect = 3e-20 Identities = 49/132 (37%), Positives = 84/132 (63%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL E+DGF V ++AATNR D+LD ALLRPGRFDR + V PD GR I ++ + Sbjct: 261 LLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKK 320 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 + +++ + +++ T GF+GAD++N+ EAA +A R +++ +++ +A+ +I Sbjct: 321 MKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINV--- 377 Query: 362 KKNAVVSEQKRK 397 K+N + S ++R+ Sbjct: 378 KRNKMESMKERR 389
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 96.7 bits (239), Expect = 4e-20 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ Sbjct: 331 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 390 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 328 LA+DVD +++++ T G+ GADL L EAA+ R + I ++ S Sbjct: 391 MKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439 Score = 92.0 bits (227), Expect = 1e-18 Identities = 45/107 (42%), Positives = 67/107 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG + V ++ ATNRPD++DSALLRPGR D+ + + PD R+ I + R Sbjct: 607 LLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRK 666 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 322 +AKDVD +A+ T GF+GAD+ + A A R ++++ ++E Sbjct: 667 SPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENE 713
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 96.7 bits (239), Expect = 4e-20 Identities = 47/109 (43%), Positives = 70/109 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ Sbjct: 331 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKN 390 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 328 LA+DVD +++++ T G+ GADL L EAA+ R + I ++ S Sbjct: 391 MKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439 Score = 94.4 bits (233), Expect = 2e-19 Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG + V ++ ATNRPD++DSALLRPGR D+ + + PD R+ I + R Sbjct: 608 LLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRK 667 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEISKDE 322 +AKDVD +A+ T GF+GAD+ + A A R ++ K+I K++ Sbjct: 668 SPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEK 715
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 95.1 bits (235), Expect = 1e-19 Identities = 51/124 (41%), Positives = 78/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF N+ V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 372 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ DV+++++AR T F GA + + EA ++A RR E++ + D +E I+ Sbjct: 373 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHE---DYMEGILEVQA 429 Query: 362 KKNA 373 KK A Sbjct: 430 KKKA 433
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 95.1 bits (235), Expect = 1e-19 Identities = 51/124 (41%), Positives = 78/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF N+ V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR Sbjct: 313 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 372 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ DV+++++AR T F GA + + EA ++A RR E++ + D +E I+ Sbjct: 373 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHE---DYMEGILEVQA 429 Query: 362 KKNA 373 KK A Sbjct: 430 KKKA 433
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 94.7 bits (234), Expect = 2e-19 Identities = 51/124 (41%), Positives = 78/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF N+ V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR Sbjct: 316 LLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 375 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ DV+++++AR T F GA + + EA ++A RR E++ + D +E I+ Sbjct: 376 MNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHE---DHMEGILEVQA 432 Query: 362 KKNA 373 KK A Sbjct: 433 KKKA 436
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 94.4 bits (233), Expect = 2e-19 Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 2/110 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD GR+ +L +H++ Sbjct: 332 LLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKN 391 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEISKDEI 325 LA++VD +++++ T G+ GADL L EAA+ R D+ ++ D I Sbjct: 392 MKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTI 441 Score = 89.0 bits (219), Expect = 9e-18 Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG + V ++ ATNRPD++D ALLRPGR D+ + + PD R +I + R Sbjct: 608 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRK 667 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEISKDE 322 L+KD+D +A+ T GF+GAD+ + A A R ++ K+I +++ Sbjct: 668 SPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREK 715
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 94.0 bits (232), Expect = 3e-19 Identities = 51/124 (41%), Positives = 77/124 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR Sbjct: 278 LLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 337 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ DV+++++AR T F GA + + EA I+A RR E++ + D +E I+ Sbjct: 338 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHE---DYMEGILEVQA 394 Query: 362 KKNA 373 KK A Sbjct: 395 KKKA 398
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 94.0 bits (232), Expect = 3e-19 Identities = 61/162 (37%), Positives = 92/162 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LT+MDG G GV VLAAT+RPD++DSALLRPGR D+ V D PD R+ IL+ +R Sbjct: 923 MLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRN 982 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++K V+ VA GF+GADLQ L A + A ++++KDE +AG Sbjct: 983 MNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVH---EKLTKDE-----SMAMAGEM 1034 Query: 362 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPR 487 N ++KR + + +G+ +L+ E P + ++I + Sbjct: 1035 DDN---DDKKRMVECFQFSGNTEKKSLI-ELKPSDRATVIKK 1072
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 93.6 bits (231), Expect = 4e-19 Identities = 47/130 (36%), Positives = 76/130 (58%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF ++ ATNRPD LD ALLRPGR DR++ + P+ GR+ IL++H Sbjct: 259 LLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEK 318 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 + ++D++ + + T G GADL+N++ EA +A + D + + ++ A R +A + Sbjct: 319 VSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSA-ARKVADLK 377 Query: 362 KKNAVVSEQK 391 K + QK Sbjct: 378 KLEGTIDYQK 387
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 93.6 bits (231), Expect = 4e-19 Identities = 44/128 (34%), Positives = 77/128 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A PG +GA+++ + EA + A R +++++ A+ +++ Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395 Query: 362 KKNAVVSE 385 +KN + + Sbjct: 396 EKNMSIKK 403
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 93.6 bits (231), Expect = 4e-19 Identities = 44/128 (34%), Positives = 77/128 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A PG +GA+++ + EA + A R +++++ A+ +++ Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395 Query: 362 KKNAVVSE 385 +KN + + Sbjct: 396 EKNMSIKK 403
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 93.6 bits (231), Expect = 4e-19 Identities = 44/128 (34%), Positives = 77/128 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A PG +GA+++ + EA + A R +++++ A+ +++ Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395 Query: 362 KKNAVVSE 385 +KN + + Sbjct: 396 EKNMSIKK 403
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 93.6 bits (231), Expect = 4e-19 Identities = 44/128 (34%), Positives = 77/128 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A PG +GA+++ + EA + A R +++++ A+ +++ Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395 Query: 362 KKNAVVSE 385 +KN + + Sbjct: 396 EKNMSIKK 403
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 93.6 bits (231), Expect = 4e-19 Identities = 44/128 (34%), Positives = 77/128 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR Sbjct: 276 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 335 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A PG +GA+++ + EA + A R +++++ A+ +++ Sbjct: 336 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 395 Query: 362 KKNAVVSE 385 +KN + + Sbjct: 396 EKNMSIKK 403
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 93.6 bits (231), Expect = 4e-19 Identities = 44/128 (34%), Positives = 77/128 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LDSALLRPGR DR++ P+ R+ IL++HSR Sbjct: 270 LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 329 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A PG +GA+++ + EA + A R +++++ A+ +++ Sbjct: 330 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 389 Query: 362 KKNAVVSE 385 +KN + + Sbjct: 390 EKNMSIKK 397
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 92.8 bits (229), Expect = 6e-19 Identities = 44/115 (38%), Positives = 71/115 (61%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V V+ ATNRPD LD ALLRPGR DR++ + P+ R+ IL++HS Sbjct: 277 LLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNK 336 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 346 ++DF+ V + + GF+ ADL+N+ EA + A R + + + ++ A+ ++ Sbjct: 337 ITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 92.8 bits (229), Expect = 6e-19 Identities = 44/115 (38%), Positives = 72/115 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R+ IL++H+ Sbjct: 260 LLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGP 319 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 346 ++D++ + + + GF GADL+N+ EA + A R D + +++ A+ ++ Sbjct: 320 ITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 92.8 bits (229), Expect = 6e-19 Identities = 44/115 (38%), Positives = 72/115 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R+ IL++H+ Sbjct: 260 LLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGP 319 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 346 ++D++ + + + GF GADL+N+ EA + A R D + +++ A+ ++ Sbjct: 320 ITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 92.8 bits (229), Expect = 6e-19 Identities = 44/115 (38%), Positives = 72/115 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R+ IL++H+ Sbjct: 260 LLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGP 319 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 346 ++D++ + + + GF GADL+N+ EA + A R D + +++ A+ ++ Sbjct: 320 ITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 92.4 bits (228), Expect = 8e-19 Identities = 48/121 (39%), Positives = 73/121 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL E+DGF V ++AATNR D+LD ALLRPGRFDR + V P+ GR I ++ + Sbjct: 261 LLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQK 320 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 ++ +D +A T GF+GA+++N+ EA +A R K ++ ++ A+E+I A Sbjct: 321 MKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNN 380 Query: 362 K 364 K Sbjct: 381 K 381
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 92.4 bits (228), Expect = 8e-19 Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 14/175 (8%) Frame = +2 Query: 5 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 181 L MDG+ + +I++ ATNR + LD A++RPGRFDRQ+ P R IL + R Sbjct: 490 LIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNT 549 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAA------RRDLKEISKDEISDALER 343 KAL D +A R+ G G DL+ L + +L+A ++ + I++D ALER Sbjct: 550 KALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALER 609 Query: 344 IIAGPEKKNAVVSEQKRKL-------VAYHEAGHALVGALMPEYDPVAKISIIPR 487 + + ++S + AYHEAG AL+ L+PE PV + + P+ Sbjct: 610 V----SRIRHIISNYELAFGKYDFYRTAYHEAGIALIHTLLPECRPVYSVKLFPK 660
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 92.0 bits (227), Expect = 1e-18 Identities = 44/128 (34%), Positives = 77/128 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + VL TNR D+LD ALLRPGR DR++ P AGR+ IL++HSR Sbjct: 259 LLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRK 318 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K++ + G +GA+L+ + EA + A R +S+++ A+ +++ Sbjct: 319 MNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKKDS 378 Query: 362 KKNAVVSE 385 ++N +++ Sbjct: 379 EQNMSINK 386
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 91.7 bits (226), Expect = 1e-18 Identities = 43/128 (33%), Positives = 76/128 (59%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LD ALLRPGR DR++ P+ R+ IL++HSR Sbjct: 275 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 334 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A PG +GA+++ + EA + A R +++++ A+ +++ Sbjct: 335 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 394 Query: 362 KKNAVVSE 385 +KN + + Sbjct: 395 EKNMSIKK 402
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 91.7 bits (226), Expect = 1e-18 Identities = 43/128 (33%), Positives = 76/128 (59%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LD ALLRPGR DR++ P+ R+ IL++HSR Sbjct: 272 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 331 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A PG +GA+++ + EA + A R +++++ A+ +++ Sbjct: 332 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDS 391 Query: 362 KKNAVVSE 385 +KN + + Sbjct: 392 EKNMSIKK 399
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 90.9 bits (224), Expect = 2e-18 Identities = 51/129 (39%), Positives = 75/129 (58%), Gaps = 1/129 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL MDG VIV+ ATNRPD +D AL RPGRFDR+ PDV R +IL++ +R Sbjct: 542 LLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRK 601 Query: 182 KALAKDVDF-DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP 358 + +F DK+A T G+ GADL++L EAA+++ +R +I + ++++ P Sbjct: 602 WSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQIYRSN-----DKLLVDP 656 Query: 359 EKKNAVVSE 385 K VS+ Sbjct: 657 SKIKVKVSD 665
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 90.5 bits (223), Expect = 3e-18 Identities = 54/125 (43%), Positives = 73/125 (58%), Gaps = 2/125 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT MDG N+ V+VLAATNRP+ +D AL R GRFDR++ + PD GR IL ++ Sbjct: 651 LLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKK 710 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE--RIIAG 355 L DV+ K+A+ G+ GADL L EAAI + + + DE D +E +I Sbjct: 711 MKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDE-EDFIEFMKISVD 769 Query: 356 PEKKN 370 +KKN Sbjct: 770 EDKKN 774 Score = 87.0 bits (214), Expect = 3e-17 Identities = 40/91 (43%), Positives = 58/91 (63%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 +LTE+DG + + ++AATNRPD+LD AL RPGR D+ + + PD+ R I + + Sbjct: 1059 ILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKN 1118 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEA 274 L +DVD +A+RT GF+GAD+ NL A Sbjct: 1119 TPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 90.1 bits (222), Expect = 4e-18 Identities = 47/121 (38%), Positives = 70/121 (57%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGFS + V VLAATNR DVLD ALLR GR DR++ P R +IL++HSR Sbjct: 308 LLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRK 367 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 D+++ ++AR T F GA L+ + EA ++A R + ++ + + + A Sbjct: 368 MTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKS 427 Query: 362 K 364 K Sbjct: 428 K 428
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/116 (37%), Positives = 71/116 (61%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + + ++ ATNR D+LD ALLRPGR DR++ P VA R IL +HSR Sbjct: 275 LLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRK 334 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 L + ++ KVA + G +GAD++ + EA + A R +++++ A+ +++ Sbjct: 335 MNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVM 390
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 89.7 bits (221), Expect = 5e-18 Identities = 52/117 (44%), Positives = 72/117 (61%), Gaps = 9/117 (7%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHS 175 LLT+MDG G GV +LAAT+RPD++DSALLRPGR D+ V + P + R+ IL+ V+S Sbjct: 821 LLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNS 880 Query: 176 RGK-------ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 + K AL K+ D +A +T GF+GADLQ L A + + R L + E+ Sbjct: 881 KDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHRWLSAADQSEV 937
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 89.7 bits (221), Expect = 5e-18 Identities = 50/95 (52%), Positives = 60/95 (63%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT++DG G GV VLAAT+RPD++D ALLRPGR D+ V PD R+ IL V S Sbjct: 964 LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDS 1023 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILA 286 LA DVD VA T FTGADL+ L+ A + A Sbjct: 1024 LPLADDVDLQHVASVTDSFTGADLKALLYNAQLEA 1058
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 89.4 bits (220), Expect = 7e-18 Identities = 41/116 (35%), Positives = 67/116 (57%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + V+ ATNR D+LD ALLRPGR DR++ P R IL +HSR Sbjct: 273 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRS 332 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 L + +D +A + G +GA+L+ + EA + A R +++++ A+ +++ Sbjct: 333 MNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVL 388
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 89.0 bits (219), Expect = 9e-18 Identities = 46/117 (39%), Positives = 75/117 (64%), Gaps = 4/117 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHS 175 LLTE+DG + G+ V+ ATNRPD++D A+LRPGR D+ + ++ P+ ++ I++ S Sbjct: 657 LLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKS 716 Query: 176 RGKALAKDVDFDKVAR--RTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 340 G L+ DVDF+++ R + F+GADL L+ E+++LA +R K +EI L+ Sbjct: 717 HGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKR--KFFQSEEIQSVLD 771 Score = 80.1 bits (196), Expect = 4e-15 Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 4/102 (3%) Frame = +2 Query: 2 LLTEMDGFS----GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEV 169 LLT MD + VI++ ATNRPD LD+AL R GRFDR++ ++ P+ R+ IL+ Sbjct: 330 LLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKK 389 Query: 170 HSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 S + +DF K+A+ TPGF GADL+ L+ A A +R Sbjct: 390 MSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKR 431
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 89.0 bits (219), Expect = 9e-18 Identities = 46/112 (41%), Positives = 72/112 (64%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGFS + V V+AATNR D LD ALLR GR DR++ P+ RV IL +HSR Sbjct: 312 LLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRK 371 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDAL 337 A+ D++++++AR T + GA L+++ EA ++A R+ +I+ + D + Sbjct: 372 MAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGI 423
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 88.6 bits (218), Expect = 1e-17 Identities = 41/123 (33%), Positives = 74/123 (60%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V V+ ATN+ + LD AL+RPGR DR++ + PD++ + +IL +H+ Sbjct: 309 LLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSK 368 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L++DV+ + + +GAD+Q + EA +LA R +++ ++ A ER++ Sbjct: 369 MNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKV 428 Query: 362 KKN 370 ++N Sbjct: 429 EEN 431
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 86.7 bits (213), Expect = 4e-17 Identities = 43/116 (37%), Positives = 68/116 (58%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V V+ ATNR + LD ALLRPGR DR++ PD+ R RI ++H+ Sbjct: 320 LLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSK 379 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 LA DV+ ++ F+GAD++ + EA +LA R +++ + A E+++ Sbjct: 380 MTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKEKVM 435
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 86.7 bits (213), Expect = 4e-17 Identities = 40/123 (32%), Positives = 73/123 (59%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF + ++ ATNR D+LD ALLRPGR DR++ P+ R+ IL++HSR Sbjct: 284 LLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRR 343 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L + ++ K+A G +GA+++ EA + A R ++++++ A+ +++ + Sbjct: 344 MNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMKRGD 403 Query: 362 KKN 370 + N Sbjct: 404 ESN 406
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 85.5 bits (210), Expect = 1e-16 Identities = 45/106 (42%), Positives = 64/106 (60%) Frame = +2 Query: 5 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 184 + +++ + + V+V+ ATNRPD LD AL R GRFDR++ + PD A R RIL+ R Sbjct: 392 MDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL 451 Query: 185 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 322 L + DF +A TPGF GADL L EAA+ A R L ++ + + Sbjct: 452 RLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ 497 Score = 83.2 bits (204), Expect = 5e-16 Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 16/145 (11%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG V ++AATNRPD++D A+LRPGR D+ + V P A R+ IL+ ++ Sbjct: 705 LLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKN 764 Query: 182 ---KALAKDVDFDKVA--RRTPGFTGADLQNLMNEAAILAARRDLK-----------EIS 313 L DV+ + +A R +TGADL L+ EA+I A R+++ ++S Sbjct: 765 GTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVS 824 Query: 314 KDEISDALERIIAGPEKKNAVVSEQ 388 +A +++ + KK+ ++ E+ Sbjct: 825 HKHFEEAFKKVRSSISKKDQIMYER 849
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 84.7 bits (208), Expect = 2e-16 Identities = 43/117 (36%), Positives = 73/117 (62%), Gaps = 4/117 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS-- 175 LLT++DG + V+++ TNR D+LD ALLRPGR + QV + PD AGR++IL++H+ Sbjct: 351 LLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNK 410 Query: 176 --RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 340 L D++ ++A RT ++GA+L+ ++ A A R ++S D+++ +E Sbjct: 411 MKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNR---QLSMDDLTKPVE 464
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 84.0 bits (206), Expect = 3e-16 Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 1/109 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL-EVHSR 178 LL E+DG GV+++AATNRPD +D+ALLRPGR DR + V PDV R+ IL + + Sbjct: 640 LLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKK 699 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 VD ++A RT G++GA++ L EA + A DL +++K E+ Sbjct: 700 FNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDL-DVAKVEL 747 Score = 70.9 bits (172), Expect = 2e-12 Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 4/104 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH--- 172 LLT MDG V+V+AATNRP+ +D AL RPGRFD++V + PDV R IL Sbjct: 370 LLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSR 429 Query: 173 -SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 301 S + + +A +T G+ GADL L E+ + +R L Sbjct: 430 MSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGL 473
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 84.0 bits (206), Expect = 3e-16 Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 4/112 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS-- 175 LL+++DG + ++V+ TNRPD++D ALLRPGR + ++ + PD GR++IL +H+ Sbjct: 354 LLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTAR 413 Query: 176 -RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 RG + L+ DVD ++A T F+GA+L+ L+ A A R +K +K E+ Sbjct: 414 MRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 84.0 bits (206), Expect = 3e-16 Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 4/112 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS-- 175 LL+++DG + ++V+ TNRPD++D ALLRPGR + ++ + PD GR++IL +H+ Sbjct: 354 LLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTAR 413 Query: 176 -RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 RG + L+ DVD ++A T F+GA+L+ L+ A A R +K +K E+ Sbjct: 414 MRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 84.0 bits (206), Expect = 3e-16 Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 4/112 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS-- 175 LL+++DG + ++V+ TNRPD++D ALLRPGR + ++ + PD GR++IL +H+ Sbjct: 354 LLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTAR 413 Query: 176 -RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 RG + L+ DVD ++A T F+GA+L+ L+ A A R +K +K E+ Sbjct: 414 MRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 83.2 bits (204), Expect = 5e-16 Identities = 44/120 (36%), Positives = 75/120 (62%), Gaps = 5/120 (4%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DG + ++V+ TNR D++D ALLRPGR + Q+ + P+ GRV+IL +H++ Sbjct: 359 LLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKR 418 Query: 182 ----KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 346 +A DVD +++A +T F+GA+L+ L+ A A R +K SK + +A+E++ Sbjct: 419 MRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKL 478
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 82.4 bits (202), Expect = 8e-16 Identities = 45/99 (45%), Positives = 60/99 (60%) Frame = +2 Query: 5 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 184 + +++ + + V+V+ ATNRPD LD AL R GRFDR+V + PD A R RIL+ R Sbjct: 391 MDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKL 450 Query: 185 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 301 L + +F +A TPGF GADL L EAA+ A R L Sbjct: 451 RLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 489 Score = 82.0 bits (201), Expect = 1e-15 Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 16/144 (11%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG V +LAATNRPD++D A+LRPGR D+ + V P A RV IL+ ++ Sbjct: 704 LLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKN 763 Query: 182 ---KALAKDVDFDKVAR--RTPGFTGADLQNLMNEAAILAARRDLK-----------EIS 313 L +DV+ + +A R +TGADL L+ EA++ A R+++ ++S Sbjct: 764 GTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVS 823 Query: 314 KDEISDALERIIAGPEKKNAVVSE 385 DA +++ K+ V+ E Sbjct: 824 HKHFEDAFKKVKPSISIKDQVMYE 847
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 82.4 bits (202), Expect = 8e-16 Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 4/106 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR- 178 LL++MDG + ++V+ TNR D++D+ALLRPGRF+ Q+ + PD GR I +H++ Sbjct: 412 LLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKK 471 Query: 179 ---GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 307 L+ DV+FD+++ T FTGA+++ L N A A R K+ Sbjct: 472 LTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTKK 517
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 82.0 bits (201), Expect = 1e-15 Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL MDG G V+V+ ATNR D LD AL RPGRFDR++ PD+ R +IL++H+ Sbjct: 520 LLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSK 579 Query: 182 KALAKDV--DFDKVARRTPGFTGADLQNLMNEAAILAAR 292 K + D +A RT G+ GADL+ L EA ++ R Sbjct: 580 WEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLR 618
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/116 (33%), Positives = 65/116 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V V+ ATNR + LD AL+RPGR DR++ PD + RI ++H+ Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 LA DV D + +GAD++ + EA ++A R +++ ++ + E ++ Sbjct: 372 MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/116 (33%), Positives = 65/116 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V V+ ATNR + LD AL+RPGR DR++ PD + RI ++H+ Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 LA DV D + +GAD++ + EA ++A R +++ ++ + E ++ Sbjct: 372 MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/116 (33%), Positives = 65/116 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V V+ ATNR + LD AL+RPGR DR++ PD + RI ++H+ Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 LA DV D + +GAD++ + EA ++A R +++ ++ + E ++ Sbjct: 372 MTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 81.6 bits (200), Expect = 1e-15 Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 5/120 (4%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS-- 175 LL++MDG + ++V+ TNR D++D ALLRPGR + Q+ V PD GR++IL++H+ Sbjct: 431 LLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTAR 490 Query: 176 --RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 346 + +VD + +++RT F+GA+L+ L+ A A R +K K + DA+E++ Sbjct: 491 MREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKL 550
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 81.6 bits (200), Expect = 1e-15 Identities = 39/116 (33%), Positives = 65/116 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V V+ ATNR + LD AL+RPGR DR++ PD + RI ++H+ Sbjct: 312 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSR 371 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 LA DV D++ +GAD++ + EA ++A R +++ ++ + E + Sbjct: 372 MTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENFL 427
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 81.3 bits (199), Expect = 2e-15 Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 4/119 (3%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDG + ++V+ TNR D++D ALLRPGR + + + PD GR++IL++H+ Sbjct: 405 LLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSR 464 Query: 182 KA----LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 346 A L DVD +++A T F+GA++ L+ A+ A R +K + +S LE I Sbjct: 465 MASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGNLENI 523
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 80.1 bits (196), Expect = 4e-15 Identities = 38/116 (32%), Positives = 66/116 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V V+ ATNR + LD AL+RPGR DR++ PD + RI +H+ Sbjct: 311 LLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSR 370 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 LA+DV+ ++ +GAD++ + EA ++A R +++ ++ + E ++ Sbjct: 371 MTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 426
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 80.1 bits (196), Expect = 4e-15 Identities = 53/118 (44%), Positives = 72/118 (61%), Gaps = 6/118 (5%) Frame = +2 Query: 2 LLTEMDGFSG----NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILE 166 LL E+DG +G + GV V+ ATNRPD+LD+ALLRPGRFD+ + + D + ILE Sbjct: 1155 LLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILE 1214 Query: 167 VHSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISKDEISDAL 337 +R AL DV D+VA + P +TGADL L ++A + A R K + DE +AL Sbjct: 1215 ALTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR--KATAVDEKINAL 1270
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 79.7 bits (195), Expect = 5e-15 Identities = 39/116 (33%), Positives = 65/116 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF V VL ATNR + LD AL+RPGR DR++ PD + RI ++H+ Sbjct: 315 LLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSR 374 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 L K+V+ ++ +GAD++ + EA +LA R ++ ++ + E ++ Sbjct: 375 MTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVL 430
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 78.6 bits (192), Expect = 1e-14 Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%) Frame = +2 Query: 2 LLTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVR-ILEVH 172 LL E+DG S G GV V+ ATNRPD+LD ALLRPGRFD+ + + D + + I+E Sbjct: 844 LLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEAL 903 Query: 173 SRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEI 310 +R LA DV + +++R P FTGAD L ++A + A R E+ Sbjct: 904 TRKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLNAMTRTANEV 950
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 78.2 bits (191), Expect = 2e-14 Identities = 43/120 (35%), Positives = 73/120 (60%), Gaps = 5/120 (4%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLT++DG + ++V+ TNR D++D ALLRPGR + Q+ + P+ GRV+IL +H++ Sbjct: 354 LLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKR 413 Query: 182 ----KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 346 + DVD ++A T F+GA+L+ L+ A A R +K +K + +A+E++ Sbjct: 414 MREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKVTVDPEAMEKL 473
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 77.8 bits (190), Expect = 2e-14 Identities = 41/102 (40%), Positives = 61/102 (59%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL ++DGF N V V+AATNR D+LD ALLR GR DR++ P+ R RI+++HSR Sbjct: 297 LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK 356 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 307 ++ DV+++++AR + EA ++A RR E Sbjct: 357 MNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALRRGATE 398
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 77.4 bits (189), Expect = 3e-14 Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL MDG ++V+ ATNR D +D AL RPGRFDR+ PD R IL++H+R Sbjct: 386 LLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRD 445 Query: 182 -KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 310 D +++A G+ GAD++++ EAA+ A RR +I Sbjct: 446 WNPKPLDTFLEELAENCVGYRGADIKSICAEAALCALRRRYPQI 489
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 77.0 bits (188), Expect = 3e-14 Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 11/114 (9%) Frame = +2 Query: 2 LLTEMDGFSGNSG-----------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 148 LLT MDG GN G V+V+ ATNRPD LD AL R GRF+ ++ + PD Sbjct: 357 LLTCMDG-PGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDA 415 Query: 149 RVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 310 R IL V ++ L D ++AR TPGF GADL+++ A LA R+ +K I Sbjct: 416 RAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESV----AYLAGRKAIKRI 465 Score = 74.7 bits (182), Expect = 2e-13 Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 3/112 (2%) Frame = +2 Query: 5 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 184 L E+DG V V+ ATNRPDV+D A LRPGRF + V P+ R IL+ +R K Sbjct: 653 LVELDG-GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKK 711 Query: 185 ALAKDVDFDKVARRT-PGFTGADLQNLMNEAAILAARRDL--KEISKDEISD 331 + VD D +A+ GF+GADL +L+ +A A + E S+D+++D Sbjct: 712 PIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTD 763
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 77.0 bits (188), Expect = 3e-14 Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 5/103 (4%) Frame = +2 Query: 2 LLTEMDGFSGNSG---VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEV 169 LL E+DG SG G V V+ ATNRPD+LD ALLRPGRFD+ + + D + +I+E Sbjct: 944 LLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEA 1003 Query: 170 HSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARR 295 SR L VD DKVA P FTGAD L ++A + A R Sbjct: 1004 LSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAMTR 1046
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 77.0 bits (188), Expect = 3e-14 Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 27/208 (12%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR- 178 LL +MDG + ++V+ TNR D++DSALLRPGRF+ QV + PD GR++I ++ ++ Sbjct: 375 LLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKK 434 Query: 179 ---GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL---KEISKDEISDALE 340 ++ DV+ ++A T F+GA+++ L+ A+ A + + K +K D + Sbjct: 435 MRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAK 494 Query: 341 RIIAGPEKKNAV--------VSEQKRK------LVAYHEAGHALV--GA----LMPEYDP 460 + + NA+ +SE+ K ++ Y E ++++ GA + E D Sbjct: 495 LKVTREDFLNALNDVTPAFGISEEDLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDK 554 Query: 461 VAKISIIPRGQAGGLTFFAPSEERLESG 544 +S++ G AG +E L+SG Sbjct: 555 SRLVSLLIHGPAGSGKTALAAEIALKSG 582
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 76.6 bits (187), Expect = 4e-14 Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL MDG ++V+ ATNR D +D AL RPGRFDR+ PD R IL++H+R Sbjct: 555 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRD 614 Query: 182 -KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 310 D +++A G+ GAD++++ EAA+ A RR +I Sbjct: 615 WNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRRRYPQI 658
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 76.6 bits (187), Expect = 4e-14 Identities = 38/117 (32%), Positives = 70/117 (59%), Gaps = 1/117 (0%) Frame = +2 Query: 2 LLTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR 178 LL ++DGF + + V+ ATNR LD AL+RPGR DR++ + PD A + +I +H+ Sbjct: 318 LLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTS 377 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 L +DV+ +++ + +GA+++ +++EA +LA R + D+ A E+++ Sbjct: 378 KMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVL 434
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 76.6 bits (187), Expect = 4e-14 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL MDG ++V+ ATNR D +D AL RPGRFDR+ PD R IL++H+R Sbjct: 210 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRD 269 Query: 182 -KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 310 D+ +++A G+ GAD++++ EAA+ A RR +I Sbjct: 270 WNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYPQI 313
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 76.6 bits (187), Expect = 4e-14 Identities = 42/123 (34%), Positives = 66/123 (53%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF N V V+ ATNR D LD ALLRPGR DR++ PD + I + Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L+++VD + R +GAD+ ++ E+ +LA R + + + A + +I E Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411 Query: 362 KKN 370 +++ Sbjct: 412 QEH 414
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 76.6 bits (187), Expect = 4e-14 Identities = 42/123 (34%), Positives = 66/123 (53%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF N V V+ ATNR D LD ALLRPGR DR++ PD + I + Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L+++VD + R +GAD+ ++ E+ +LA R + + + A + +I E Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDE 411 Query: 362 KKN 370 +++ Sbjct: 412 QEH 414
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 75.5 bits (184), Expect = 1e-13 Identities = 41/115 (35%), Positives = 71/115 (61%), Gaps = 7/115 (6%) Frame = +2 Query: 2 LLTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 160 LL +MDG SG S V+VLAATN P +D AL R R ++++ + P++ GR ++ Sbjct: 358 LLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPEIDGREQL 415 Query: 161 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 L ++ + LA D+D +A + G++GAD+ N+ +A+++A RR ++ + +EI Sbjct: 416 LRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRRRIQGLRPEEI 470
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 75.1 bits (183), Expect = 1e-13 Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 7/110 (6%) Frame = +2 Query: 2 LLTEMDGFSGNS-----GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRIL 163 LL E+DG SG + GV V+ ATNRPD+LD ALLRPGRFD+ + + D + +IL Sbjct: 964 LLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKIL 1023 Query: 164 EVHSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEI 310 E +R LA +VD ++A+R FTGAD L +++ + A R E+ Sbjct: 1024 EALTRKFKLADNVDLYEIAKRCSFTFTGADFYALCSDSMLNAMTRTANEV 1073
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 75.1 bits (183), Expect = 1e-13 Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 10/181 (5%) Frame = +2 Query: 2 LLTEMDGFSG----NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILE 166 LL E+DG SG + GV V+ ATNRPD+LD ALLRPGRFD+ + + D + ++ILE Sbjct: 1119 LLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILE 1178 Query: 167 VHSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISKDEISDALER 343 +R L V VA++ P +TGAD L ++A + A R + + Sbjct: 1179 ALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTRQAASVDA-----KIRE 1233 Query: 344 IIAGPEKKNAVVSEQKRKLVAY---HEAGHALVGALMPEYD-PVAKISIIPRGQAGGLTF 511 + A P + +S AY H A + ++ E D A ++P AG L+ Sbjct: 1234 LEAQPRSRTGPIS------TAYFFDHHATPEDIAVMVTEEDFLAANRELVPSVSAGELSH 1287 Query: 512 F 514 + Sbjct: 1288 Y 1288
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 74.7 bits (182), Expect = 2e-13 Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 3/108 (2%) Frame = +2 Query: 2 LLTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILEVHS 175 LL E+DG S + GV ++ ATNRPD+LD ALLRPGRFD+ + + D + I+ + Sbjct: 843 LLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALT 902 Query: 176 RGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 316 R ++ D++FD++ P +TGAD L ++A + A R KEI + Sbjct: 903 RKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTRISKEIDE 950
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 74.7 bits (182), Expect = 2e-13 Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 3/108 (2%) Frame = +2 Query: 2 LLTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHS 175 LL E+DG S ++ GV V+ ATNRPD+LD ALLRPGRFD+ + + PD ++ ILE + Sbjct: 857 LLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALT 916 Query: 176 RGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 316 R L DV ++A+ P +TGAD L ++A + A R + + K Sbjct: 917 RKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMSRIARMVEK 964
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 73.9 bits (180), Expect = 3e-13 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 1/117 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV-DRPDVAGRVRILEVHSR 178 LLT+MDGF + V V+ ATNR D LD ALLRPGR DR++ D R + + + Sbjct: 261 LLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITA 320 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 L+ +VD D R +GA + +M +A +LA R+ I + +I +A R + Sbjct: 321 KMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAV 377
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 73.6 bits (179), Expect = 4e-13 Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 8/130 (6%) Frame = +2 Query: 2 LLTEMDGFSGNSG----VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILE 166 LL E+DG SG G V V+ ATNRPD+LD ALLRPGRFD+ + + D + V I+E Sbjct: 1116 LLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIME 1175 Query: 167 VHSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRD--LKEISKDEISDAL 337 +R L V VA R P +TGAD L ++A + A R L + E++ A Sbjct: 1176 ALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAVTRQATLVDTKIRELNAA- 1234 Query: 338 ERIIAGPEKK 367 AGPE K Sbjct: 1235 ----AGPEGK 1240
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 73.6 bits (179), Expect = 4e-13 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 8/138 (5%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSR 178 LL E+DG V V+ ATNRPD+LD ALLRPGRFD+ V V D A ++R+L +R Sbjct: 827 LLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITR 886 Query: 179 GKALAKDVDFDKVAR-RTPGFTGADLQNLMNEAAILAARRDLKEISK--DEISDAL---- 337 L V V P TGADL +L ++A + A +R ++++ + + S AL Sbjct: 887 KFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTM 946 Query: 338 ERIIAGPEKKNAVVSEQK 391 E ++ + VSEQ+ Sbjct: 947 EDLLQAAARLQPSVSEQE 964 Score = 33.1 bits (74), Expect = 0.56 Identities = 26/98 (26%), Positives = 47/98 (47%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL + D S ++V+A T+R L + + F ++ V + R+ +L+ + Sbjct: 554 LLLDEDPLSRCPPLMVVATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAH 611 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 L ++V+ ++ARR GF DL L+ A+ A R Sbjct: 612 LPLGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTR 649
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 73.6 bits (179), Expect = 4e-13 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 8/138 (5%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSR 178 LL E+DG V V+ ATNRPD+LD ALLRPGRFD+ V V D A ++R+L +R Sbjct: 830 LLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITR 889 Query: 179 GKALAKDVDFDKVAR-RTPGFTGADLQNLMNEAAILAARRDLK------EISKDEISDAL 337 L V V P TGADL +L ++A + A +R ++ E+ + + Sbjct: 890 KFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTM 949 Query: 338 ERIIAGPEKKNAVVSEQK 391 E ++ + VSEQ+ Sbjct: 950 EDLLQAAARLQPSVSEQE 967 Score = 33.1 bits (74), Expect = 0.56 Identities = 27/98 (27%), Positives = 45/98 (45%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL + D S ++V+A T+R L + + F ++ V A R+ IL+ + Sbjct: 555 LLLDEDALSRCPPLMVVATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAH 612 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 L ++V+ ++ARR GF DL L+ A R Sbjct: 613 LPLGQEVNLPQLARRCAGFVVGDLYALLTHTCRAACTR 650
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 73.2 bits (178), Expect = 5e-13 Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 7/115 (6%) Frame = +2 Query: 2 LLTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 160 LL +MDG G S V+VLAATN P +D AL R R ++++ + P GR + Sbjct: 333 LLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREEL 390 Query: 161 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 L + R LA DVD +A G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 391 LRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 73.2 bits (178), Expect = 5e-13 Identities = 39/116 (33%), Positives = 61/116 (52%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF ++ V V+ ATNR D LD ALLRPGR DR++ PD + + Sbjct: 288 LLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSR 347 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 L+ DVD + R +GAD+ ++ EA + A R + + ++ A + ++ Sbjct: 348 MNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVV 403
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 73.2 bits (178), Expect = 5e-13 Identities = 41/123 (33%), Positives = 63/123 (51%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF N V V+ ATNR D LD ALLRPGR DR++ PD + I + Sbjct: 292 LLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSK 351 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 361 L+++VD + R +GAD+ ++ +LA R + + A + +I E Sbjct: 352 MNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDE 411 Query: 362 KKN 370 +++ Sbjct: 412 QEH 414
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 72.4 bits (176), Expect = 8e-13 Identities = 39/99 (39%), Positives = 58/99 (58%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF + V V+ ATNR D LD ALLRPGR DR++ PD + I +V + Sbjct: 277 LLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSK 336 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 298 L+ +VD + R +GA++Q++ EA + A R++ Sbjct: 337 MNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKN 375
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 72.4 bits (176), Expect = 8e-13 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%) Frame = +2 Query: 2 LLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHS 175 LL E+DG S G GV V+ ATNRPD+LD ALLRPGRFD+ + + D + I++ + Sbjct: 827 LLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALT 886 Query: 176 RGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 316 R L +D +A++ P +TGAD L ++A + A R E+ + Sbjct: 887 RKFTLESGIDILDIAKKCPFNYTGADFYALCSDALLNAMTRVAGEVDE 934
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 72.4 bits (176), Expect = 8e-13 Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 4/120 (3%) Frame = +2 Query: 5 LTEMDGFSG---NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS 175 L +MDG + V VLAATN P LD AL R RF++++ + PD+ R +++E Sbjct: 318 LVQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSM 375 Query: 176 RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR-DLKEISKDEISDALERIIA 352 G + ++++D +A RT GF+GAD+ +L AAI RR D K + E++ A+E + A Sbjct: 376 EGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESLKA 435
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 72.0 bits (175), Expect = 1e-12 Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 7/115 (6%) Frame = +2 Query: 2 LLTEMDGFSG-------NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 160 LL +MDG G + V+VLAATN P +D AL R R ++++ + P GR + Sbjct: 330 LLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAEL 387 Query: 161 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 L++ R L D+ + +A +T G++GAD+ N+ +A+++A RR + +S +EI Sbjct: 388 LKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 71.6 bits (174), Expect = 1e-12 Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 5/110 (4%) Frame = +2 Query: 2 LLTEMDGFSG---NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEV 169 LL E+DG SG GV V+ ATNRPD+LD ALLRPGRFD+ + + D + +I++ Sbjct: 938 LLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQA 997 Query: 170 HSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 316 +R L VD ++A P +TGAD L ++A + A R + K Sbjct: 998 LTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAMTRTAGAVEK 1047 Score = 32.7 bits (73), Expect = 0.73 Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Frame = +2 Query: 32 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL-----EVHSRGK---A 187 + G I + +TN D + + +FD ++++ P R IL ++ ++ K Sbjct: 664 SKGAIFIGSTNDADAISELIRSKFKFD--ISINVPTEPERKLILTDLLDDMKTKDKTPVV 721 Query: 188 LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 322 L DV D +A ++ G T DL ++++ +A R L+ +S+++ Sbjct: 722 LRPDVSLDTLALQSAGLTANDLVSIVDNTITIAIER-LERLSEEQ 765
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 71.6 bits (174), Expect = 1e-12 Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 7/115 (6%) Frame = +2 Query: 2 LLTEMDGFSG-------NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 160 LL +MDG G + V+VLAATN P +D AL R R ++++ + P GR + Sbjct: 330 LLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAEL 387 Query: 161 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 L++ R L DV + +A +T G++GAD+ N+ +A+++A RR + +S +EI Sbjct: 388 LKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 71.6 bits (174), Expect = 1e-12 Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 8/138 (5%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSR 178 LL E+DG V V+ ATNRPD+LD ALLRPGRFD+ V V D A ++R+L +R Sbjct: 829 LLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITR 888 Query: 179 GKALAKDVDFDKVAR-RTPGFTGADLQNLMNEAAILAARRDLKEISK------DEISDAL 337 L V V P TGADL +L ++A A +R + ++ + + + Sbjct: 889 KFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTM 948 Query: 338 ERIIAGPEKKNAVVSEQK 391 E ++ + VSEQ+ Sbjct: 949 EDLLQAAARLQPSVSEQE 966 Score = 30.4 bits (67), Expect = 3.6 Identities = 25/98 (25%), Positives = 44/98 (44%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL D + ++V+A T+R L + + F ++ V R+ IL + Sbjct: 554 LLLNEDPLNSCPPLMVVATTSRAQDLPADVQTA--FPHELEVPALSEGQRLSILRALTAH 611 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 L ++V+ ++ARR GF DL L+ ++ A R Sbjct: 612 LPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTR 649
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 71.2 bits (173), Expect = 2e-12 Identities = 37/116 (31%), Positives = 62/116 (53%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF + V V+ ATNR D +D ALLRPGR DR++ PD + + + Sbjct: 261 LLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSK 320 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 +L VD + + R + AD+ ++ EA +LA R +++ + +A +++ Sbjct: 321 MSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVV 376
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 70.5 bits (171), Expect = 3e-12 Identities = 39/115 (33%), Positives = 67/115 (58%), Gaps = 7/115 (6%) Frame = +2 Query: 2 LLTEMDGFSG-------NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 160 LL +MDG G + V+VLAATN P +D AL R R ++++ + P GR + Sbjct: 332 LLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAEL 389 Query: 161 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 L+++ R L D+ + +A + G++GAD+ N+ +A+++A RR + +S +EI Sbjct: 390 LKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEI 444
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 70.5 bits (171), Expect = 3e-12 Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 7/115 (6%) Frame = +2 Query: 2 LLTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 160 LL +MDG G S V+VLAATN P +D AL R R ++++ + P GR + Sbjct: 333 LLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREEL 390 Query: 161 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 L + R LA DV+ +A G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 391 LRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 70.5 bits (171), Expect = 3e-12 Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 7/115 (6%) Frame = +2 Query: 2 LLTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 160 LL +MDG G S V+VLAATN P +D AL R R ++++ + P GR + Sbjct: 333 LLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREEL 390 Query: 161 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 L + R LA DV+ +A G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 391 LRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 70.5 bits (171), Expect = 3e-12 Identities = 40/115 (34%), Positives = 68/115 (59%), Gaps = 7/115 (6%) Frame = +2 Query: 2 LLTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 160 LL +MDG G S V+VLAATN P +D AL R R ++++ + P GR + Sbjct: 330 LLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREEL 387 Query: 161 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 325 L ++ + LA DV+ + +A G++GAD+ N+ +A+++A RR ++ ++ +EI Sbjct: 388 LRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEI 442
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 70.5 bits (171), Expect = 3e-12 Identities = 38/99 (38%), Positives = 55/99 (55%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF + V V+ ATNR D LD ALLRPGR DR++ PD + I + Sbjct: 289 LLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAK 348 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 298 L+++VD ++ R +GAD+ + EA + A R + Sbjct: 349 MNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVREN 387
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 70.1 bits (170), Expect = 4e-12 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSR 178 LLT+MDGF ++ V V+ ATNR D LD ALLRPGR DR++ D R I + Sbjct: 299 LLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIAS 358 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 334 +LA + D D + R +GA + +M EA + A R++ I + ++ +A Sbjct: 359 KMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEA 410
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 70.1 bits (170), Expect = 4e-12 Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 16/126 (12%) Frame = +2 Query: 2 LLTEMDGFSGNSG--------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVR 157 LL ++DG S + V+VLAATN P +D AL R R ++++ + PD R Sbjct: 363 LLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKA 420 Query: 158 ILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--------DLKEIS 313 ++ ++ R +A DV+ + VARRT G++G DL N+ +A++ RR ++K +S Sbjct: 421 LININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMS 480 Query: 314 KDEISD 331 KD+IS+ Sbjct: 481 KDDISN 486
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 69.7 bits (169), Expect = 5e-12 Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 3/101 (2%) Frame = +2 Query: 2 LLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHS 175 LL E+DG S G G+ V+ ATNRPD+LD ALLRPGRFD+ + + D + IL + Sbjct: 848 LLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALT 907 Query: 176 RGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARR 295 R L DV D +A P +TGAD L ++A + A R Sbjct: 908 RKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAMTR 948
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 68.9 bits (167), Expect = 9e-12 Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 4/107 (3%) Frame = +2 Query: 2 LLTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVH 172 LL E+D S N V V+ ATNRPD+LD +LLRPGRFD+ V + + +L Sbjct: 780 LLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRAL 839 Query: 173 SRGKALAKDVDFDKVARRT-PGFTGADLQNLMNEAAILAARRDLKEI 310 ++ L + +D +++A+ P FTGAD+ L ++A + A +R EI Sbjct: 840 TKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 68.6 bits (166), Expect = 1e-11 Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTE+DG N GV+ +AATN P +LD A+ RF+ ++ P+ R++I+E++++ Sbjct: 245 LLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEERLKIMELYAKK 302 Query: 182 KALAKDVDFDKVARRTPGFTGADL-QNLMNEAAILAARRDLKEISKDEISDALERII 349 L + + +T GF+G D+ + + A A D +SK+++ AL++I+ Sbjct: 303 MPLPVKANLKEFVEKTKGFSGRDIKEKFLKPALHRAILEDRDYVSKEDLEWALKKIL 359
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 68.6 bits (166), Expect = 1e-11 Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV-DRPDVAGRVRILEVHSR 178 LL +MDGF +S V V+ ATNR D LD ALLRPGR DR++ D R I + Sbjct: 293 LLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIAS 352 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD-LKEISKDEISDA 334 +L+ +VD D + R +GA + +M EA + A R++ I + ++ DA Sbjct: 353 KMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDLEDA 405
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 67.4 bits (163), Expect = 3e-11 Identities = 42/129 (32%), Positives = 72/129 (55%) Frame = +2 Query: 32 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 211 N VI++ ATNRP LDSA+LR R + +++P+V R IL++ + + V+ Sbjct: 232 NCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELS 289 Query: 212 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 391 ++A++T GF+G+DL+ + +AA+L R + + S +E R I + + A+ +K Sbjct: 290 EIAKQTDGFSGSDLREMCRDAALLCVRDFVHQESPEE---DFIRPIRQEDLQRAIEKMKK 346 Query: 392 RKLVAYHEA 418 K HEA Sbjct: 347 SKSAGVHEA 355
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 67.0 bits (162), Expect = 4e-11 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Frame = +2 Query: 41 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 220 V+VLA TNRPDVLD AL+RPGRF RQ+ P + GR I +VH R L K ++ D +A Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60 Query: 221 RR----TPG 235 R+ TPG Sbjct: 61 RKLAVLTPG 69
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 66.6 bits (161), Expect = 5e-11 Identities = 36/99 (36%), Positives = 54/99 (54%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF V V+ ATNR D LD ALLRPGR DR++ PD + + +V + Sbjct: 282 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSK 341 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 298 L+ +VD + R + A++ + EA + A R++ Sbjct: 342 MNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 380
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 66.2 bits (160), Expect = 6e-11 Identities = 36/99 (36%), Positives = 53/99 (53%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +MDGF V V+ ATNR D LD ALLRPGR DR++ PD + + +V + Sbjct: 287 LLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAK 346 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 298 L +VD + R + A++ + EA + A R++ Sbjct: 347 MNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKN 385
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 63.5 bits (153), Expect = 4e-10 Identities = 38/123 (30%), Positives = 69/123 (56%) Frame = +2 Query: 41 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 220 VIV+ ATNRP LDSA++R R + +++P + R IL++ + + + + VD +VA Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288 Query: 221 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 400 + T GF+G+DL+ + +AA+L R + S++ + R + + A+ +K K Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348 Query: 401 VAY 409 A+ Sbjct: 349 AAF 351
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 63.5 bits (153), Expect = 4e-10 Identities = 38/123 (30%), Positives = 69/123 (56%) Frame = +2 Query: 41 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 220 VIV+ ATNRP LDSA++R R + +++P + R IL++ + + + + VD +VA Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288 Query: 221 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 400 + T GF+G+DL+ + +AA+L R + S++ + R + + A+ +K K Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348 Query: 401 VAY 409 A+ Sbjct: 349 AAF 351
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 63.5 bits (153), Expect = 4e-10 Identities = 38/123 (30%), Positives = 69/123 (56%) Frame = +2 Query: 41 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 220 VIV+ ATNRP LDSA++R R + +++P + R IL++ + + + + VD +VA Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288 Query: 221 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 400 + T GF+G+DL+ + +AA+L R + S++ + R + + A+ +K K Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348 Query: 401 VAY 409 A+ Sbjct: 349 AAF 351
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 63.2 bits (152), Expect = 5e-10 Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG + N GV+ + ATN P++LD A+ RF+ ++ PD R +LE + Sbjct: 248 LLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPDDEERKLMLEKYIET 305 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAI-LAARRDLKEISKDEISDAL-ERIIAG 355 L D DK+ + T +G D+++ + + A+ A D + + + I AL ER ++G Sbjct: 306 MPLKVDFPVDKLVKLTREMSGRDIKDRVLKTALHRAIAEDSESVRAEHIEYALKERKVSG 365 Query: 356 PEK 364 K Sbjct: 366 EPK 368
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 60.5 bits (145), Expect = 3e-09 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LLTEMDG + N GV+ + ATN P++LD+A+ RF+ ++ P R +LE + Sbjct: 248 LLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKYIET 305 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD-LKEISKDEISDALE 340 L D DK+ + T G +G D++ + + A+ A D + ++ I AL+ Sbjct: 306 MPLDVDFSVDKLVKLTKGMSGRDIKERVLKTALHRALADESPRVEREHIEYALK 359
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 58.9 bits (141), Expect = 1e-08 Identities = 34/100 (34%), Positives = 59/100 (59%), Gaps = 3/100 (3%) Frame = +2 Query: 5 LTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH--S 175 L +M G N G++VL ATN P VLDSA+ R RF++++ + P+ R + +H S Sbjct: 259 LVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGS 316 Query: 176 RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 +L + DF ++ R+T G++GAD+ ++ +A + R+ Sbjct: 317 TQNSLT-EADFQELGRKTDGYSGADISIIVRDALMQPVRK 355
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 58.2 bits (139), Expect = 2e-08 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 1/102 (0%) Frame = +2 Query: 5 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 184 +T DG N V+++ ATNR + +D A LR R ++ V P R +IL V + Sbjct: 217 MTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDT 274 Query: 185 ALAKD-VDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 307 L +D D +A T GF+G+DL+ L EAA+ AA+ +K+ Sbjct: 275 KLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIKQ 316
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 57.4 bits (137), Expect = 3e-08 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Frame = +2 Query: 5 LTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SR 178 L +M G N G++VL ATN P VLDSA+ R RF++++ + P+ R + ++H Sbjct: 259 LVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGT 316 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 + + DF ++ R+T G++GAD+ ++ +A + R+ Sbjct: 317 TQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Frame = +2 Query: 5 LTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SR 178 L +M G N+ G +VL ATN P VLDSA+ R RF++++ + P+ A R ++ +H Sbjct: 252 LVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGS 309 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 D + ++AR+T G++GAD+ ++ ++ + R+ Sbjct: 310 TPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Frame = +2 Query: 5 LTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SR 178 L +M G N+ G +VL ATN P VLDSA+ R RF++++ + P+ A R ++ +H Sbjct: 252 LVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGS 309 Query: 179 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 D + ++AR+T G++GAD+ ++ ++ + R+ Sbjct: 310 TPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/103 (31%), Positives = 59/103 (57%) Frame = +2 Query: 32 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 211 NS V+V+ ATNRP +D+A+LR R V P+ A R IL + G+ L+ ++ Sbjct: 231 NSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLK 288 Query: 212 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 340 ++A ++ G++G+DL+ L +AA+ R +++ +I+ + Sbjct: 289 EIASQSEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQ 331
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 56.2 bits (134), Expect = 6e-08 Identities = 24/46 (52%), Positives = 35/46 (76%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 139 LL+E+DG G VIV+ A+NR D++D A+LRPGR D ++ ++RPD Sbjct: 396 LLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 56.2 bits (134), Expect = 6e-08 Identities = 24/46 (52%), Positives = 35/46 (76%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 139 LL+E+DG G VIV+ A+NR D++D A+LRPGR D ++ ++RPD Sbjct: 396 LLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 56.2 bits (134), Expect = 6e-08 Identities = 24/46 (52%), Positives = 35/46 (76%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 139 LL+E+DG G VIV+ A+NR D++D A+LRPGR D ++ ++RPD Sbjct: 396 LLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 55.5 bits (132), Expect = 1e-07 Identities = 35/100 (35%), Positives = 62/100 (62%), Gaps = 3/100 (3%) Frame = +2 Query: 5 LTEMDGFSGN-SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 L +M+G + SGV+VL ATN P LDSA+ R RF++++ + P+ R R+ E++ G Sbjct: 253 LVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNV-G 309 Query: 182 KALAK--DVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 K ++ DF ++A+ T G++G+D+ ++ +A + RR Sbjct: 310 KIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRR 349
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 54.7 bits (130), Expect = 2e-07 Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 3/101 (2%) Frame = +2 Query: 2 LLTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-- 172 LL +M+G +S GV+VL ATN P LDSA+ R RF+R++ + PD+A R + E++ Sbjct: 256 LLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVG 313 Query: 173 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 295 L K+ D+ + T G++G+D+ ++ +A + R+ Sbjct: 314 DTPCVLTKE-DYRTLGAMTEGYSGSDIAVVVKDALMQPIRK 353
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 53.5 bits (127), Expect = 4e-07 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%) Frame = +2 Query: 5 LTEMDGF--SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VH 172 L E DG +G+ V+V+ ATNRP LD A+LR RF ++V V P+ R+ +L+ + Sbjct: 466 LIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLC 523 Query: 173 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 304 +G L + + ++AR T G++G+DL L +AA L R+LK Sbjct: 524 KQGSPLTQK-ELAQLARMTDGYSGSDLTALAKDAA-LGPIRELK 565
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 53.5 bits (127), Expect = 4e-07 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%) Frame = +2 Query: 5 LTEMDGF--SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VH 172 L E DG +G+ V+V+ ATNRP LD A+LR RF ++V V P+ R+ +L+ + Sbjct: 464 LIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLC 521 Query: 173 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 304 +G L + + ++AR T G++G+DL L +AA L R+LK Sbjct: 522 KQGSPLTQK-ELAQLARMTDGYSGSDLTALAKDAA-LGPIRELK 563
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 52.8 bits (125), Expect = 7e-07 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%) Frame = +2 Query: 32 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE-VHSRGKALAKDVDF 208 +S V+VL ATN P +D A R RF R++ + PD R+ L+ + ++ K +D+D+ Sbjct: 616 DSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDY 673 Query: 209 DKVARRTPGFTGADLQNLMNEAAILAAR--------RDLKEISKDEISDALERIIAGPEK 364 + + T GF+G+DL +L EAA+ R D +I EI D ++ Sbjct: 674 ELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMFADFDKIRGIEIKDFQNALLT---I 730 Query: 365 KNAVVSEQKRK 397 K +V SE +K Sbjct: 731 KKSVSSESLQK 741
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 50.4 bits (119), Expect = 3e-06 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 3/150 (2%) Frame = +2 Query: 38 GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKAL---AKDVDF 208 G+I++ +T+ P +D AL+ P R D+ + + D+ R + K K + F Sbjct: 1768 GIIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHF 1827 Query: 209 DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQ 388 ++ A RT G+ G DL L NE +++ + I D + AL R G N + Sbjct: 1828 NEFAYRTMGYNGRDLVALANEVSLINTTQGNSTIYIDAVRLALHRQTLGFTYINNQMLFC 1887 Query: 389 KRKLVAYHEAGHALVGALMPEYDPVAKISI 478 + + V H+ G A++ + + P+ + I Sbjct: 1888 QNEGVLLHKIGKAVIQNIFIKIFPMNPLYI 1917
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 50.4 bits (119), Expect = 3e-06 Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Frame = +2 Query: 41 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR--GKALAKDVDFDK 214 V V+A N D+L ++R GRFD +D P++ R I ++H + K D+ K Sbjct: 361 VFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKK 420 Query: 215 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 394 +A+ + F+GA+++ + EA A + +E + D+I AL+++I + +N+ Q Sbjct: 421 LAQLSESFSGAEIRQSIIEAMYQAFDQQ-REFTTDDICLALKQLIPLAQLENS----QTL 475 Query: 395 KLVAYHEAG 421 KL ++ +G Sbjct: 476 KLQSWASSG 484
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 47.8 bits (112), Expect = 2e-05 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%) Frame = +2 Query: 8 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP-DVAGRVRILEVHSRGK 184 ++ +G ++ V+VLAATN P +D A R RF R+ + P D V+ ++ S K Sbjct: 751 SDTNGDEDDTRVLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQK 808 Query: 185 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 301 + DFD++ + T G++G+D+ +L +AA + RDL Sbjct: 809 HTLTESDFDELVKITEGYSGSDITSLAKDAA-MGPLRDL 846
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 46.6 bits (109), Expect = 5e-05 Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 3/108 (2%) Frame = +2 Query: 35 SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKD---VD 205 S V V+A N D L LLR GRFD + PD+ R I +VH + K K D Sbjct: 375 SPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLK-KIRPKSWSTYD 433 Query: 206 FDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 + ++ ++ F+GA+++ + EA +A + +E + +I ++L+R++ Sbjct: 434 TEILSAQSNRFSGAEIEESIYEAMHIAFNEN-REFTTSDILNSLKRVV 480
>FTSH_POPEU (P84578) Cell division protein ftsH homolog, chloroplast (EC| 3.4.24.-) (Fragments) Length = 47 Score = 43.5 bits (101), Expect = 4e-04 Identities = 19/28 (67%), Positives = 25/28 (89%) Frame = +2 Query: 212 KVARRTPGFTGADLQNLMNEAAILAARR 295 ++ ++TPGF+GADL NL+NEAAILA RR Sbjct: 20 ELLQKTPGFSGADLANLLNEAAILAGRR 47
>YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC intergenic| region (ORF2971) (ORFB) Length = 2971 Score = 42.0 bits (97), Expect = 0.001 Identities = 28/100 (28%), Positives = 42/100 (42%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 181 LL +D N G +V A T+ P VLD AL RPGR D + + + + Sbjct: 2299 LLVIIDSVRSNKGFVVFATTDIPHVLDPALRRPGRLDETICLPNIHTSNILN-------- 2350 Query: 182 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 301 K+ + K A+ T F + N M + +RD+ Sbjct: 2351 --FTKNYEIFKSAKDTSNFGKKIILNEMQNLTTTSTQRDM 2388
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/42 (42%), Positives = 26/42 (61%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 127 LL +DG + + I TN P+ LD+A++RPGR D +V V Sbjct: 345 LLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 38.9 bits (89), Expect = 0.010 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Frame = +2 Query: 41 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH---SRGKALAKDVDFD 211 V V+A N L S +LR GRFD +D P+ R I ++H R K+ ++ + Sbjct: 361 VFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIHLARIRPKSW-QNYNIK 419 Query: 212 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 349 +++ F+GA+++ + E+ A + +E S ++I ALE+ I Sbjct: 420 QLSLLCNKFSGAEIEQAIVESMHTAFSEE-REFSTEDIKIALEQFI 464
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 38.1 bits (87), Expect = 0.017 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 112 LL +DG + + I+ TN P+ LD AL+RPGR D Sbjct: 327 LLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVD 363
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 37.0 bits (84), Expect = 0.039 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 112 LL +DG + IV TN D LD AL+RPGR D Sbjct: 312 LLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVD 348
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 36.6 bits (83), Expect = 0.051 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 112 LL +DG + IV TN D LD AL+RPGR D Sbjct: 312 LLNALDGVASTEARIVFMTTNHIDRLDPALIRPGRVD 348
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 35.8 bits (81), Expect = 0.087 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 112 LL +DG + IV TN D LD AL+RPGR D Sbjct: 312 LLNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVD 348
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 35.4 bits (80), Expect = 0.11 Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 2/100 (2%) Frame = +2 Query: 47 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 226 ++AATN LD+A+ R RFD + DRP+ A R L++ + +A D + A Sbjct: 221 LIAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKNVPVAFDPARNSAA-- 276 Query: 227 TPGFTGADLQNLMNEA--AILAARRDLKEISKDEISDALE 340 G++ A+++ + +A A++ RR K++ + + + AL+ Sbjct: 277 LEGYSFAEIERVCTQAIKAMIIERR--KQVQERDFNRALQ 314
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 33.9 bits (76), Expect = 0.33 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +2 Query: 2 LLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 112 LL +DG + + IV TN + LD AL+RPGR D Sbjct: 313 LLNALDGVASSEARIVFMTTNFIERLDPALVRPGRVD 349
>RECA_MYCTU (P0A5U4) Protein recA (Recombinase A) [Contains: Endonuclease| PI-MtuI (EC 3.1.-.-) (Mtu recA intein)] Length = 790 Score = 33.1 bits (74), Expect = 0.56 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%) Frame = -2 Query: 301 QITTGGKD----GSLIHQVLKISTGETRCPS-GNLIKVHILR-QCLSSGVNLKDPDTAGY 140 + TTGGK S+ V ++ T + + GN +V +++ +CL+ G + DP T Sbjct: 208 ETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNKCLAEGTRIFDPVTGTT 267 Query: 139 IR---TVDGDLPIEPPWPQKRGVKHIRPV 62 R VDG PI K G H RPV Sbjct: 268 HRIEDVVDGRKPIHVVAAAKDGTLHARPV 296
>RECA_MYCBO (P0A5U5) Protein recA (Recombinase A) [Contains: Endonuclease| PI-MboI (EC 3.1.-.-) (Mbo recA intein)] Length = 790 Score = 33.1 bits (74), Expect = 0.56 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%) Frame = -2 Query: 301 QITTGGKD----GSLIHQVLKISTGETRCPS-GNLIKVHILR-QCLSSGVNLKDPDTAGY 140 + TTGGK S+ V ++ T + + GN +V +++ +CL+ G + DP T Sbjct: 208 ETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNKCLAEGTRIFDPVTGTT 267 Query: 139 IR---TVDGDLPIEPPWPQKRGVKHIRPV 62 R VDG PI K G H RPV Sbjct: 268 HRIEDVVDGRKPIHVVAAAKDGTLHARPV 296
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 32.7 bits (73), Expect = 0.73 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = -3 Query: 219 ATLSKSTSFANAFPLE*TSRILTRPATSGRSTVTCRSNRPGRRSAESSTSGLLVAASTMT 40 +T S ++S + T+R T P T+ R T T + RP +R +++S S+ T Sbjct: 405 STTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKT 464 Query: 39 PLFPEKPSISVSS 1 P S S SS Sbjct: 465 PTTTRPISSSSSS 477
>C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial precursor| (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3. Length = 975 Score = 32.7 bits (73), Expect = 0.73 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 7/120 (5%) Frame = +2 Query: 44 IVLAATNRPDVLDSALLRPGRFDRQVTVDR-PDVAGRVRILEVHSRGKALAKDVDFDKVA 220 IV+AA P + S ++ G V ++ PD++ + G+ L DVDFD V Sbjct: 240 IVIAACGIPQYVKSDWIKEGAVVIDVGINYVPDISKK--------SGQKLVGDVDFDSVK 291 Query: 221 RRT------PGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS 382 +T PG G ++ +LAA+R E K + L + P + +S Sbjct: 292 EKTSYITPVPGGVGPMTVAMLVSNVLLAAKRQFVESEKLPVIKPLPLHLESPVPSDIDIS 351
>RL14_LUMRU (O46160) 60S ribosomal protein L14| Length = 152 Score = 31.6 bits (70), Expect = 1.6 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%) Frame = +2 Query: 134 PDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI- 310 PD V I++V + +AL D VAR++ F +L NL + A +K+ Sbjct: 19 PDQGKLVAIVDVIDQNRALV-DGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAW 77 Query: 311 SKDEISDALE-----RIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 433 KDEIS E + IA EK+ + ++ KL+ +A + L+ Sbjct: 78 EKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLI 123
>PCDG8_PANTR (Q5DRB2) Protocadherin gamma A8 precursor (PCDH-gamma-A8)| Length = 932 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +2 Query: 86 ALLRPGRFDRQ-VTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNL 262 +L+ GR DR+ + P + IL V +GK +++ + P F DL+ Sbjct: 83 SLVTAGRIDREELCAQSPRCLININIL-VEDKGKLFGIEIEIVDINDNNPKFQVEDLEVK 141 Query: 263 MNEAAILAARRDLKE 307 +NE A+ AR L E Sbjct: 142 INEIAVPGARYPLPE 156
>QUEA_THIDA (Q3SH62) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 344 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/71 (29%), Positives = 34/71 (47%) Frame = +2 Query: 134 PDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS 313 PDV G R+L V + G D++ R P GAD +MN+ ++ AR ++ S Sbjct: 20 PDVRGASRLLHVTAAGAL------HDRMFRELPTLLGADDLLVMNDTRVIKARLFGEKDS 73 Query: 314 KDEISDALERI 346 + +ER+ Sbjct: 74 GGRVELLVERV 84
>ISPG_SYNP6 (Q5N3W3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 407 Score = 30.8 bits (68), Expect = 2.8 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -2 Query: 562 VAPAVQSRLEPLFAWSKERETTSLTSRNDGNLGNRVIFRHQGTDEGM 422 + ++ LEPL +E++ N G+L R++F + T EGM Sbjct: 148 IGKQIRDTLEPLVTSLREQDKAMRIGVNHGSLAERMLFTYGDTPEGM 194
>SYI_GLOVI (Q7NF75) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 983 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +2 Query: 347 IAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISI 478 IA PE + +E +L A+H+ L+ AL+ E D + +I++ Sbjct: 230 IAAPETATVMAAELLPRLSAFHDREEELIDALLGERDDLPEIAV 273
>PCDG8_HUMAN (Q9Y5G5) Protocadherin gamma A8 precursor (PCDH-gamma-A8)| Length = 932 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +2 Query: 86 ALLRPGRFDRQ-VTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNL 262 +L+ GR DR+ + P + L V +GK +++ + P F DL+ Sbjct: 83 SLITAGRIDREELCAQSPRCLININTL-VEDKGKLFGVEIEIIDINDNNPKFQVEDLEVK 141 Query: 263 MNEAAILAARRDLKE 307 +NE A+ AR L E Sbjct: 142 INEIAVPGARYPLPE 156
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 30.0 bits (66), Expect = 4.8 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = +2 Query: 221 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 385 R + GF G L+N+ ++ A +DL+ D+ SD LE+ I+ P + + VSE Sbjct: 677 RLSKGFGGKGLENIKSKREE-AQNKDLELKKNDKRSDDLEKKISNPREGHDSVSE 730
>ISPG_SYNPX (Q7U712) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 398 Score = 29.6 bits (65), Expect = 6.2 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 2/98 (2%) Frame = -2 Query: 562 VAPAVQSRLEPLFAWSKERETTSLTSRNDGNLGNRVIFRHQGTDEGM--SSLMVSHKLPL 389 + + EPL +++ N G+L R++F + T +GM S++ Sbjct: 142 IGARIHETFEPLVTLLRDQNKALRIGVNHGSLAERMLFTYGDTPKGMVESAMEFVRICDE 201 Query: 388 LF*NNCILLLRPSNDPLQSIRDLVLAYLLQITTGGKDG 275 L +N ++ ++ S P+ ++ AY L T K+G Sbjct: 202 LDFHNIVISMKASRAPV-----MLAAYRLMADTMDKEG 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,670,903 Number of Sequences: 219361 Number of extensions: 1786955 Number of successful extensions: 6775 Number of sequences better than 10.0: 260 Number of HSP's better than 10.0 without gapping: 6295 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6675 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
